Citrus Sinensis ID: 047157

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------79
Protein Sequence
MALKRIVPCVLTLILKFYGLHGQTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSGAASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETVTCNCIPGYTPLNPSDVSEGCHPETVVNYCAETSSKNFTVEVMDDAGFLFDNFADLARVSNVDVEGCRKAVMDDCYSLGASLVGSTCVKTRMPLLNARKSASTKGMKAIIKVPTKMSNPSNHEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAIYYSPAARGLIKRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMPPLLHDQMS
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHccccccccccccccEEcccccEEEcccccEEEEEEEcccccEEEEEEccccccccEEEEcccccccccccEEEEEEcccEEEEEccccEEEEEccccEEEEEEEcccEEEEcccccEEEEcccccccccccccEEccccEEEEEcccccccccccEEEEEEEcccEEEEEEEccccccEEccccccccEEEEEEccccEEEEEcccccEEEEEEEEEcccccEEEEEEEccccEEEEEEEEccccccEEEEEEEcccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccHHHHHHHHHccccEEEEEEcccEEEEEEcccccEEEccccccEEEEEEEccccccccccccccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHcccccccccccccEEEEEEEccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHcccccccEEEccccccEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccccccccccccccccccccccccccccccccccEEEEccccccHHHHccccccccccEEEEcEEEEEEEEccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEccccEEEEEEEccccccEEEEEEEEcccccEEEEEEccccccccccEEEEccccEEEEEccccEEEEEccccccEEEEEccccEEEEcccccEEEEEccccccccccccEccccccEEEEcccccccccccEEEEEccccccEEEEEccccEEEEEccccccEEEEcccccccccEEEEEEEEcccEEEEEEEEEcccEEEEEEEccccEEEEEEEEccccccEEEEEEccccccccHcccccccEEEcccccccccccccccccccccccccccEEcccccccccccEEcccccccccccEEccccccHHHHccccHHHHHHHHHHcccEEEEEccccEEEEEcccHHcHHHcccccccEEEEEEHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEcHHHHHHHHHcHHHHccccccccEEEEEEEEcccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccHHEEcccccccHHHHHHHHHHHHHHHHHHHHccccEEEcccccHHHEEEccccccccccccHcHHcHHHHcccccccccEEEEEEcccccHHHHHcccEEEcccHEHHHEEEEEEEccccccccccccccccccccHHHHHHHHHHHccccHHHHcHHHcccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHccccccccccccccccc
Coil and Loop (DISEMBL)
MALKRIVPCVLTLILKFYglhgqtspnislgssitagsntswlspsgdfafGFYSLFGGLYLLGiwfdkipektlvwaadrdspaeagskitltndgKLLLTYFNGSVQQIYSGAASLALMQNDgnfvlknansavvwdsfdfptdtilpgqvlltgkklysnsrgtadystgnytlemqadgnlvlsayhfadpgywytgtvTLNNVSLIFNQSAFMYLINStgdnifrltrnvmtptedyyhratidghgnfqqfayhkstssRWTRVWRavndpcivncicgvygmctssdnetvtcncipgytplnpsdvsegchpetvVNYCaetssknftvevmddagflfdnfadlarvsnvdvegCRKAVMDDCYslgaslvgstcvktrmpllnarkSASTKGMKAIIKvptkmsnpsnhegkkknnfnSRLLLKIGFIFSAICALLSGVAAiyyspaarglikrrnyfdpnsmeinfrEFTFQELQEATKGFSKlvgtgssgkvyrgILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYelmpngtlsnflfhegqrpgwVQRVEIALGVARGLLYLHEECETQiihcdikpqnvlLDLKTLDTNYMAKIsdfgiskllnkdqtrtdtnmrgtmgyvapewlrnvpvttkvDVFSFGVMLLEIICGRrhielsrveeeseeVDIVLSDWVISCMlsrnlqvlvshdpevlsdLERFERMAMVGLwcnhpdpnlrpsMKKVIHMLEGTlevgmppllhdqms
Flexible Loop (DISEMBL)
MALKRIVPCVLTLILKFYGLHGQTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRdspaeagskitltndgKLLLTYFNGSVQQIYSGAASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLtgkklysnsrgTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETVTCNCIPGYTPLNPSDVSEGCHPETVVNYCAETSSKNFTVEVMDDAGFLFDNFADLARVSNVDVEGCRKAVMDDCYSLGASLVGSTCVKTRMpllnarksastkgMKAIIKvptkmsnpsnhegkkkNNFNSRLLLKIGFIFSAICALLSGVAAIYYSPAARGLIKRRNYFDPNSMEINFREFTFQELQEATKGfsklvgtgssgkvyrgilrlkdtqiEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIsdfgiskllnkdqtrtdtnmrgtmgyvapewlrnvpVTTKVDVFSFGVMLLEIICGRRHIelsrveeeseevDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTlevgmppllhdqms
Low Complexity Region (SEG)
MALKRIVPCVLTLILKFYGLHGQTSPNISLGSSITAGSNTSWLSPSGDfafgfyslfgglyllgIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSGAASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETVTCNCIPGYTPLNPSDVSEGCHPETVVNYCAETSSKNFTVEVMDDAGFLFDNFADLARVSNVDVEGCRKAVMDDCYSLGASLVGSTCVKTRMPLLNARKSASTKGMKAIIKVPTKMSNPSNHEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAIYYSPAARGLIKRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHielsrveeeseevdivlsdWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMPPLLHDQMS
Disordered region (IsUnstruct)
***KRIVPCVLTLILKFYGLHGQTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADR******GSKITLTNDGKLLLTYFNGSVQQIYSGAASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETVTCNCIPGYTPLNPSDVSEGCHPETVVNYCAETSSKNFTVEVMDDAGFLFDNFADLARVSNVDVEGCRKAVMDDCYSLGASLVGSTCVKTRMPLL**********************************FNSRLLLKIGFIFSAICALLSGVAAIYYSPAARGLIKRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDP******KKVIHMLEGTL*************
Disordered Region (DISOPRED)
***KRIVPCVLTLILKFYGLHGQTSPNISLG***T*****SWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSGAASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETVTCNCIPGYTPLNPS*V***C*******************EVMDDAGFLFDNFADLARVSNVDVEGCRKAVMDDCYSLGASLVGSTCVKTRMPLLNARKSASTKGMKAIIKV*********************LLLKIGFIFSAICALLSGVAAIYYSPAA*******************REFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRH***********EVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGM**L******
Disordered Region (DISEMBL)
MALKRIVPCVLTLILKFYGLHGQTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSGAASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETVTCNCIPGYTPLNPSDVSEGCHPETVVNYCAETSSKNFTVEVMDDAGFLFDNFADLARVSNVDVEGCRKAVMDDCYSLGASLVGSTCVKTRMPLLNARKSASTKGMKAIIKVPTK********GKKKNNFNSRLLLKIGFIFSAICALLSGVAAIYYSPAARGLIKRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSR********DIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMPPLLHDQMS
Disordered Region (DISPRO)
*ALKRIVPCVLTLILKFYGLHGQTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSGAASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETVTCNCIPGYTPLNPSDVSEGCHPETVVNYCAETSSKNFTVEVMDDAGFLFDNFADLARVSNVDVEGCRKAVMDDCYSLGASLVGSTCVKTRMPLLNARKSASTKGMKAIIKVPTKMSNPSNHE**KKNNFNSRLLLKIGFIFSAICALLSGVAAIYYSPAARGLIK*********MEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMPPL******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALKRIVPCVLTLILKFYGLHGQTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSGAASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETVTCNCIPGYTPLNPSDVSEGCHPETVVNYCAETSSKNFTVEVMDDAGFLFDNFADLARVSNVDVEGCRKAVMDDCYSLGASLVGSTCVKTRMPLLNARKSASTKGMKAIIKVPTKMSNPSNHEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAIYYSPAARGLIKRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKxxxxxxxxxxxxxxxxxxxxxFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMPPLLHDQMS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	788	2.2.26 [Sep-21-2011]
Q39202	832	G-type lectin S-receptor-	yes	no	0.955	0.905	0.339	1e-121
Q9FLV4	872	G-type lectin S-receptor-	no	no	0.945	0.854	0.302	2e-94
Q39203	797	G-type lectin S-receptor-	no	no	0.866	0.856	0.325	3e-92
O64477	828	G-type lectin S-receptor-	no	no	0.911	0.867	0.318	2e-90
P17801	817	Putative receptor protein	N/A	no	0.931	0.898	0.301	8e-89
Q9XID3	829	G-type lectin S-receptor-	no	no	0.866	0.823	0.313	8e-81
O81905	850	Receptor-like serine/thre	no	no	0.907	0.841	0.288	2e-74
Q09092	857	Putative serine/threonine	N/A	no	0.901	0.828	0.301	7e-74
Q8RWZ5	821	G-type lectin S-receptor-	no	no	0.875	0.840	0.292	1e-73
O65238	872	G-type lectin S-receptor-	no	no	0.897	0.810	0.295	2e-72

>sp|Q39202|RLK1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2

 Score =  435 bits (1118), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 280/825 (33%), Positives = 423/825 (51%), Gaps = 72/825 (8%)

Query: 6   IVPCVLTLILKFYGLHGQTSPN--ISLGSSITAGSN----TSWLSPSGDFAFGFYSLF-G 58
           I+  VL L L+ + +  Q   N  + +G S+TA  +    +SW SPSGDFAFGF  +   
Sbjct: 8   IIHLVLILQLQTFFVFSQNIRNGSVPVGESLTASESQQISSSWRSPSGDFAFGFRKIQPN 67

Query: 59  GLYLLGIWFDKIPEKTLVWAADRDSPAEA----GSKITLTNDGKLLLTYFNGSV--QQIY 112
             + L IWFDKI +KT+VW A   +        GSK+TLT DG L++    G    + + 
Sbjct: 68  DGFTLSIWFDKISDKTIVWHAQAVNTTTGLVPNGSKVTLTADGGLVIADPRGQELWRALS 127

Query: 113 SGAASLALMQNDGNFVLKNANSA----VVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTA 168
            G+ S     +DGNFVL    S     V+W SF+ PTDT+LP Q +  G+ L S+ R   
Sbjct: 128 GGSVSRGRFTDDGNFVLFRDGSEDSDEVLWSSFENPTDTLLPNQNIEVGRNL-SSRRTET 186

Query: 169 DYSTGNYTLEMQADGNLVLSAYHFADPG-------YWYTGTVTLNN--VSLIFNQSAFMY 219
            +  G ++L ++ DGNL L + +            Y+ + T   NN  + L+FNQS  +Y
Sbjct: 187 SFKKGRFSLRLEDDGNLQLHSLNAETASESDIYSQYYESNTNDPNNPGIQLVFNQSGEIY 246

Query: 220 LINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQQFAYHKSTSSR--------WTRVW 271
           ++           R+      D+   A       F         + R          R  
Sbjct: 247 VLQRNNSRFVVKDRD-----PDFSIAAPFYISTGFLLSTIIPKEARRIVGGCLLGLCRDN 301

Query: 272 RAVNDPCIVNCICGVYGMCTSSDNETVTCNCIPGYTPLNPSDVSEGCHPETVVNYC-AET 330
               D  + N  CG   +C+  +N+   C C   +   +PS+    C P+  +  C  E 
Sbjct: 302 MCSPDDALGNMACGYNNICSLGNNKRPKCECPERFVLKDPSNEYGDCLPDFEMQTCRPEN 361

Query: 331 SSKNFTVEVMDDAGFLFDN--FADLARVSNVDVEGCRKAVMDDCYSLGASLVGST----- 383
            + N  V + +       N  F D    +N D E C+ + + DC  L A+++  T     
Sbjct: 362 QTANSDVNLYEFITLEKTNWPFGDYESYANYDEERCKASCLSDC--LCAAVIFGTNRDLK 419

Query: 384 CVKTRMPLLNARKSASTKGMKAIIKVPTKMSNPSNHEGKKKNNFNSRLLLKIGFIFSAIC 443
           C K + PL +  +S         IKV  +        G +    +  ++     + ++  
Sbjct: 420 CWKKKFPLSHGERSPRGDS-DTFIKVRNRSIADVPVTGNRAKKLDWLIIACSVLLGTSAF 478

Query: 444 ALLSGVAAIYYSPAARGLIKR------RNYFDPNSMEINFREFTFQELQEATKGFSKLVG 497
            +     +   +  ++ ++K       R      + E+N R FT+ EL EAT+ F++ +G
Sbjct: 479 VIFDTSCSYRKTKKSKNMMKNQARDIGRTTATTTANELNLRVFTYGELAEATRDFTEELG 538

Query: 498 TGSSGKVYRGILRLKD-TQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFC 556
            G+ G VY+G L +   +++ +AVKKL++      +EF  E+K+IG+ HHKNLVRL+GFC
Sbjct: 539 RGAFGIVYKGYLEVAGGSEVTVAVKKLDRLDLDNEKEFKNEVKVIGQIHHKNLVRLIGFC 598

Query: 557 SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCD 616
           +E   +++VYE +P GTL+NFLF    RP W  R  IA+ +ARG+LYLHEEC  QIIHCD
Sbjct: 599 NEGQSQMIVYEFLPQGTLANFLFRR-PRPSWEDRKNIAVAIARGILYLHEECSEQIIHCD 657

Query: 617 IKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTT 676
           IKPQN+LLD       Y  +ISDFG++KLL  +QT T TN+RGT GYVAPEW RN P+T+
Sbjct: 658 IKPQNILLD-----EYYTPRISDFGLAKLLLMNQTYTLTNIRGTKGYVAPEWFRNSPITS 712

Query: 677 KVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEV 736
           KVDV+S+GVMLLEI+C ++ ++L        E +++L +W   C     L+ L   D E 
Sbjct: 713 KVDVYSYGVMLLEIVCCKKAVDL--------EDNVILINWAYDCFRQGRLEDLTEDDSEA 764

Query: 737 LSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMPP 781
           ++D+E  ER   + +WC   +  +RP+M+ V  MLEG ++V  PP
Sbjct: 765 MNDMETVERYVKIAIWCIQEEHGMRPNMRNVTQMLEGVIQVFDPP 809

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9FLV4|Y5248_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1

 Score =  347 bits (890), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 247/816 (30%), Positives = 409/816 (50%), Gaps = 71/816 (8%)

Query: 17  FYGLHGQTSPNISLGSSITAGS-NTSWLSPSGDFAFGFYSLF-GGLYLLGIWFDKIP-EK 73
           F+ +   T P+I LGS + A   N +W+S +G FA GF        +LL IWF ++P + 
Sbjct: 19  FFLVSLATEPHIGLGSKLKASEPNRAWVSANGTFAIGFTRFKPTDRFLLSIWFAQLPGDP 78

Query: 74  TLVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSV--QQIYSGAASLALMQNDGNFVLKN 131
           T+VW+ +R+SP    + + L   G L+L+  N  V      +     A+M   GNF+L  
Sbjct: 79  TIVWSPNRNSPVTKEAVLELEATGNLVLSDQNTVVWTSNTSNHGVESAVMSESGNFLLLG 138

Query: 132 AN---SAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEM-QADGNLVL 187
                   +W SF  P+DT+LP Q L    +L SN   +     G+Y+L+M Q   +L L
Sbjct: 139 TEVTAGPTIWQSFSQPSDTLLPNQPLTVSLELTSNPSPSRH---GHYSLKMLQQHTSLSL 195

Query: 188 SAYH------FADPGYW-------YTGTVTL-----NNVSLIFNQS---AFMYLINSTGD 226
              +       A+  YW        TG VT       +  +++ +S   A     N   D
Sbjct: 196 GLTYNINLDPHANYSYWSGPDISNVTGDVTAVLDDTGSFKIVYGESSIGAVYVYKNPVDD 255

Query: 227 NI-FRLTRNVMTPTEDYYHRATIDGHGNFQQFAYHKST--SSRWTRVWRAVNDPCIVNCI 283
           N  +  + N+         R  ++ +GN + + +      SS+W   W AV++PC +  I
Sbjct: 256 NRNYNNSSNLGLTKNPVLRRLVLENNGNLRLYRWDNDMNGSSQWVPEWAAVSNPCDIAGI 315

Query: 284 CGVYGMCT-SSDNETVTCNCIPGYTPLNPSDVSEGCHP-ETVVNYCAETSSKN--FTVEV 339
           CG  G+C      +   C C+PG   L   + ++ C    ++V  C    ++N  F +  
Sbjct: 316 CG-NGVCNLDRTKKNADCLCLPGSVKLPDQENAKLCSDNSSLVQECESNINRNGSFKIST 374

Query: 340 MDDAGFLFDNFADLARVSNV-DVEGCRKAVMDDCYSLGASLVGSTCVKTRMPLLNA---- 394
           + +  + F   + +  +S++ +V  C +  + DC  + AS+ G    K    +L +    
Sbjct: 375 VQETNYYFSERSVIENISDISNVRKCGEMCLSDCKCV-ASVYGLDDEKPYCWILKSLNFG 433

Query: 395 --RKSASTKGMKAIIKVPTKMSNPSNHEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAI 452
             R   ST  +K         ++ +N    +K++   + +L I  +   +  +      +
Sbjct: 434 GFRDPGSTLFVKTRANESYPSNSNNNDSKSRKSHGLRQKVLVIPIVVGMLVLVALLGMLL 493

Query: 453 YYSPAARGLIKRRNYFDPNSMEI--NFREFTFQELQEATKGFSKLVGTGSSGKVYRGILR 510
           YY+   +  +KR      NS+ +  +   FT+++LQ  T  FS+L+G+G  G VY+G + 
Sbjct: 494 YYNLDRKRTLKRA---AKNSLILCDSPVSFTYRDLQNCTNNFSQLLGSGGFGTVYKGTVA 550

Query: 511 LKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMP 570
               +  +AVK+L++ +     EF+TE+  IG  HH NLVRL G+CSE+  RLLVYE M 
Sbjct: 551 ---GETLVAVKRLDRALSHGEREFITEVNTIGSMHHMNLVRLCGYCSEDSHRLLVYEYMI 607

Query: 571 NGTLSNFLFHEGQRPG---WVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLK 627
           NG+L  ++F   Q      W  R EIA+  A+G+ Y HE+C  +IIHCDIKP+N+LLD  
Sbjct: 608 NGSLDKWIFSSEQTANLLDWRTRFEIAVATAQGIAYFHEQCRNRIIHCDIKPENILLD-- 665

Query: 628 TLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVML 687
               N+  K+SDFG++K++ ++ +   T +RGT GY+APEW+ N P+T K DV+S+G++L
Sbjct: 666 ---DNFCPKVSDFGLAKMMGREHSHVVTMIRGTRGYLAPEWVSNRPITVKADVYSYGMLL 722

Query: 688 LEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMA 747
           LEI+ GRR++++S   E     D     W    + +      V    + +++ E   +  
Sbjct: 723 LEIVGGRRNLDMSYDAE-----DFFYPGWAYKELTNGTSLKAVDKRLQGVAEEEEVVKAL 777

Query: 748 MVGLWCNHPDPNLRPSMKKVIHMLEGTL-EVGMPPL 782
            V  WC   + ++RPSM +V+ +LEGT  E+ +PP+
Sbjct: 778 KVAFWCIQDEVSMRPSMGEVVKLLEGTSDEINLPPM 813

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q39203|SD22_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 OS=Arabidopsis thaliana GN=SD22 PE=1 SV=1

 Score =  340 bits (872), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 255/783 (32%), Positives = 375/783 (47%), Gaps = 100/783 (12%)

Query: 29  SLGSSITAGSNTSWLSPSGDFAFGFYSLFGGL--YLLGIWFDKIPEKTLVWAADRDSPAE 86
           S+ S +    N + LS    F  GF+S   G   + LGI +  +P  T VW A+R  P  
Sbjct: 20  SVQSKVIIKGNQTILSFKAIFRLGFFSTTNGSSNWYLGISYASMPTPTHVWVANRIRPVS 79

Query: 87  A--GSKITLTNDGKLLLTYF-NGSVQQIYSGAASLAL-MQNDGNFVLKNANSAVVWDSFD 142
               S + LT+ G L+++   +G V Q  +            GN +L N + + VW SFD
Sbjct: 80  DPDSSTLELTSTGYLIVSNLRDGVVWQTDNKQPGTDFRFSETGNLILINDDGSPVWQSFD 139

Query: 143 FPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGT 202
            PTDT LPG + +TG    ++ R   D S G Y+L +    N     Y    P YW TG 
Sbjct: 140 NPTDTWLPG-MNVTGLTAMTSWRSLFDPSPGFYSLRLSPSFNEFQLVYKGTTP-YWSTGN 197

Query: 203 VTLNNVSLIFNQSAFMYLINSTGDNIFRLT-RNVMTPTEDYYH--------------RAT 247
            T           AF+ +   T   I+R    N  TPT  +++              R  
Sbjct: 198 WT---------GEAFVGVPEMTIPYIYRFHFVNPYTPTASFWYIVPPLDSVSEPRLTRFM 248

Query: 248 IDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETVTCNCIPGYT 307
           +  +G  +Q+ +   T S W   W    DPC V  +CG  G C+S       C CI G+ 
Sbjct: 249 VGANGQLKQYTWDPQTQS-WNMFWLQPEDPCRVYNLCGQLGFCSS--ELLKPCACIRGFR 305

Query: 308 PLNPS-----DVSEGCHPETVVNYCAETSSKNFTVEVMDDAGFLFDNFADLARVSNVDVE 362
           P N +     D S+GC  E       ++  K+ T E + D    +D    ++R+  V   
Sbjct: 306 PRNDAAWRSDDYSDGCRREN-----GDSGEKSDTFEAVGD--LRYDGDVKMSRL-QVSKS 357

Query: 363 GCRKAVMDDCYSLGASLVGSTCVKTRMPLLNARKSASTKGMKAIIKVPTKMSNPSNHEGK 422
            C K  + +          S+CV       +  KS   K +         + +P+N +  
Sbjct: 358 SCAKTCLGN----------SSCVG----FYHKEKSNLCKIL---------LESPNNLKNS 394

Query: 423 KKNNFNSRLLLKIGFIFSAICALLSGVAAIYYSPAARGLI-------KRRNYFDPNSMEI 475
           K N   S ++L         C+++  ++ + ++     ++       K+    D +   +
Sbjct: 395 KGNISKSIIIL---------CSVVGSISVLGFTLLVPLILLKRSRKRKKTRKQDEDGFAV 445

Query: 476 -NFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF 534
            N + F+F+ELQ AT GFS  VG G  G V++G L    +   +AVK+LE+       EF
Sbjct: 446 LNLKVFSFKELQSATNGFSDKVGHGGFGAVFKGTL--PGSSTFVAVKRLERP-GSGESEF 502

Query: 535 MTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP-GWVQRVEI 593
             E+  IG   H NLVRL GFCSE   RLLVY+ MP G+LS++L     +   W  R  I
Sbjct: 503 RAEVCTIGNIQHVNLVRLRGFCSENLHRLLVYDYMPQGSLSSYLSRTSPKLLSWETRFRI 562

Query: 594 ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT 653
           ALG A+G+ YLHE C   IIHCDIKP+N+LLD     ++Y AK+SDFG++KLL +D +R 
Sbjct: 563 ALGTAKGIAYLHEGCRDCIIHCDIKPENILLD-----SDYNAKVSDFGLAKLLGRDFSRV 617

Query: 654 DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSR---VEEESEEVD 710
              MRGT GYVAPEW+  +P+TTK DV+SFG+ LLE+I GRR++ ++     E+E+E   
Sbjct: 618 LATMRGTWGYVAPEWISGLPITTKADVYSFGMTLLELIGGRRNVIVNSDTLGEKETEPEK 677

Query: 711 IVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM 770
                W    ++  N+  +V        + E   RMA V +WC   +  +RP+M  V+ M
Sbjct: 678 WFFPPWAAREIIQGNVDSVVDSRLNGEYNTEEVTRMATVAIWCIQDNEEIRPAMGTVVKM 737

Query: 771 LEG 773
           LEG
Sbjct: 738 LEG 740

Serine/threonine-protein kinase.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1

 Score =  333 bits (855), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 257/806 (31%), Positives = 388/806 (48%), Gaps = 88/806 (10%)

Query: 20  LHGQTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGL-YLLGIWFDKIPEKTLVWA 78
           +HG ++ +   G    +G  T  +S  G +  GF+       + +G+W+ ++ + T++W 
Sbjct: 17  IHGSSAVDTISGDFTLSGDQTI-VSSDGTYEMGFFKPGSSSNFYIGMWYKQLSQ-TILWV 74

Query: 79  ADRDSP-AEAGSKITLTNDGKLLL-------TYFNGSVQQIYSGAASLALMQNDGNFVLK 130
           A+RD   ++  S +   ++G L+L         ++  +    S +A  A++Q+DGN VL+
Sbjct: 75  ANRDKAVSDKNSSVFKISNGNLILLDGNYQTPVWSTGLNSTSSVSALEAVLQDDGNLVLR 134

Query: 131 NANSA----VVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTA-----DYSTGNYTLEMQA 181
              S+    V+W SFD P DT LPG  +   K+   + R T+     D S G ++LE+  
Sbjct: 135 TGGSSLSANVLWQSFDHPGDTWLPGVKIRLDKRTGKSQRLTSWKSLEDPSPGLFSLELDE 194

Query: 182 DGNLVLSAYHFADPG---YWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTP 238
                 +AY     G   YW +G    N  S IF+    M L      + F  T +    
Sbjct: 195 S-----TAYKILWNGSNEYWSSGP--WNPQSRIFDSVPEMRLNYIYNFSFFSNTTDSYFT 247

Query: 239 TEDYYH----RATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSD 294
              Y      R  +D  G  +QF + +   + W   W      C V   CG +G+C  SD
Sbjct: 248 YSIYNQLNVSRFVMDVSGQIKQFTWLEGNKA-WNLFWSQPRQQCQVYRYCGSFGIC--SD 304

Query: 295 NETVTCNCIPGYTPLNPSD-----VSEGCHPETVVNYCAETSSKNFTVEVMDDAGFLFDN 349
                C C  G+ P++  D      S GC  +T +       ++ F +  M     L DN
Sbjct: 305 KSEPFCRCPQGFRPMSQKDWDLKDYSAGCVRKTELQCSRGDINQFFRLPNMK----LADN 360

Query: 350 FADLARVSNVDVEGCRKAVMDDC------YSLGASLVGSTCVKTRMPLLNARKSASTKGM 403
              L R S   +  C  A   DC      Y  G+S     C+     +LN ++       
Sbjct: 361 SEVLTRTS---LSICASACQGDCSCKAYAYDEGSS----KCLVWSKDVLNLQQLEDENSE 413

Query: 404 KAIIKVPTKMSNPSNHEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAIYYSPAARGLIK 463
             I  +    S+  N     K+N         G IF A+   L  +  +          +
Sbjct: 414 GNIFYLRLAASDVPNVGASGKSN-------NKGLIFGAVLGSLGVIVLVLLVVILILRYR 466

Query: 464 RRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKL 523
           RR        +     F+++ELQ ATK FS  +G G  G V++G L   D+  +IAVK+L
Sbjct: 467 RRKRMRGEKGDGTLSAFSYRELQNATKNFSDKLGGGGFGSVFKGAL--PDSS-DIAVKRL 523

Query: 524 EKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF---- 579
           E  I +  ++F TE+  IG   H NLVRL GFCSE  K+LLVY+ MPNG+L + LF    
Sbjct: 524 EG-ISQGEKQFRTEVVTIGTIQHVNLVRLRGFCSEGSKKLLVYDYMPNGSLDSHLFLNQV 582

Query: 580 HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD 639
            E    GW  R +IALG ARGL YLH+EC   IIHCDIKP+N+LLD     + +  K++D
Sbjct: 583 EEKIVLGWKLRFQIALGTARGLAYLHDECRDCIIHCDIKPENILLD-----SQFCPKVAD 637

Query: 640 FGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIEL 699
           FG++KL+ +D +R  T MRGT GY+APEW+  V +T K DV+S+G+ML E++ GRR+ E 
Sbjct: 638 FGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFELVSGRRNTE- 696

Query: 700 SRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLS---DLERFERMAMVGLWCNHP 756
              + E+E+V    S W  + +L+++  +    DP +     D+E   R   V  WC   
Sbjct: 697 ---QSENEKVRFFPS-WAAT-ILTKDGDIRSLVDPRLEGDAVDIEEVTRACKVACWCIQD 751

Query: 757 DPNLRPSMKKVIHMLEGTLEVGMPPL 782
           + + RP+M +V+ +LEG LEV  PP 
Sbjct: 752 EESHRPAMSQVVQILEGVLEVNPPPF 777

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P17801|KPRO_MAIZE Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2

 Score =  328 bits (842), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 250/829 (30%), Positives = 397/829 (47%), Gaps = 95/829 (11%)

Query: 9   CVLTLILKFYGLHGQTSPNISLGSSITAGS--NTSWLSPSGDFAFGFYSLFGGLYLLGIW 66
           C+L+  +  +     +   + LGSS+   S  +++  S  G F+ GFY ++   +   +W
Sbjct: 13  CILSFFIALFPRAASSRDILPLGSSLVVESYESSTLQSSDGTFSSGFYEVYTHAFTFSVW 72

Query: 67  FDKIP-----EKTLVWAADRDSPAEAG-SKITLTNDGKLLLTYFNGSVQQIYSG----AA 116
           + K        KT+VW+A+ D P  A  S +TL  DG ++LT ++G+      G      
Sbjct: 73  YSKTEAAAANNKTIVWSANPDRPVHARRSALTLQKDGNMVLTDYDGAAVWRADGNNFTGV 132

Query: 117 SLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYT 176
             A + + GN V++++    VW SFD PTDT LP Q++    +L      T   S GNY 
Sbjct: 133 QRARLLDTGNLVIEDSGGNTVWQSFDSPTDTFLPTQLITAATRLVPT---TQSRSPGNYI 189

Query: 177 LEMQADGNLVLSAYH--------FADP--GYWYTGTVTLNNVSLIFNQSAFMYLINSTGD 226
               +D +++   YH        + DP    +  G    N+  L     + +   +   D
Sbjct: 190 FRF-SDLSVLSLIYHVPQVSDIYWPDPDQNLYQDGRNQYNSTRLGMLTDSGVLASSDFAD 248

Query: 227 NIFRLTRNVMTPTEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGV 286
               +  +V    +    R T+D  GN + ++ + S  S W+    A+  PC ++ +CG 
Sbjct: 249 GQALVASDVGPGVK---RRLTLDPDGNLRLYSMNDSDGS-WSVSMVAMTQPCNIHGLCGP 304

Query: 287 YGMCTSSDNETVTCNCIPGYTPLNPSDVSEGCHPETVVNY-CAETSSKNFTVEVMDDAGF 345
            G+C  S   T TC+C PGY   NP + +EGC    +VN  C     ++     + +  F
Sbjct: 305 NGICHYS--PTPTCSCPPGYATRNPGNWTEGCM--AIVNTTCDRYDKRSMRFVRLPNTDF 360

Query: 346 LFDNFADLARVSNVDVEGCRKAVMDDCYSLGASLV-GSTCVKTRMPLLNARKSASTKGMK 404
                +D   + +V +  CR   + DC   G     G+     +  L + R   ++    
Sbjct: 361 WG---SDQQHLLSVSLRTCRDICISDCTCKGFQYQEGTGSCYPKAYLFSGRTYPTSDVRT 417

Query: 405 AIIKVPTKMS------------------------NPSNHEG----KKKNNFNSRLLLKIG 436
             +K+PT +S                        N S  E      K     S+     G
Sbjct: 418 IYLKLPTGVSVSNALIPRSDVFDSVPRRLDCDRMNKSIREPFPDVHKTGGGESKWFYFYG 477

Query: 437 FIFSAICALLSGVAAIYYSPAARGLIKRRNYFDPN---SMEINFREFTFQELQEATKGFS 493
           FI +     +S ++  ++    R L     +       +M  NFR ++++EL +AT+ F 
Sbjct: 478 FIAAFFVVEVSFISFAWFFVLKRELRPSELWASEKGYKAMTSNFRRYSYRELVKATRKFK 537

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
             +G G SG VY+G+L   +    +AVKKLE ++ +  E F  EL +IGR +H NLVR+ 
Sbjct: 538 VELGRGESGTVYKGVL---EDDRHVAVKKLE-NVRQGKEVFQAELSVIGRINHMNLVRIW 593

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP--GWVQRVEIALGVARGLLYLHEECETQ 611
           GFCSE   RLLV E + NG+L+N LF EG      W  R  IALGVA+GL YLH EC   
Sbjct: 594 GFCSEGSHRLLVSEYVENGSLANILFSEGGNILLDWEGRFNIALGVAKGLAYLHHECLEW 653

Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNMRGTMGYVAPEWLR 670
           +IHCD+KP+N+L     LD  +  KI+DFG+ KLLN+   T+  +++RGT+GY+APEW+ 
Sbjct: 654 VIHCDVKPENIL-----LDQAFEPKITDFGLVKLLNRGGSTQNVSHVRGTLGYIAPEWVS 708

Query: 671 NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV--ISCMLSRNLQV 728
           ++P+T KVDV+S+GV+LLE++ G R   +S +   ++EV  +L   V  +S  L    Q 
Sbjct: 709 SLPITAKVDVYSYGVVLLELLTGTR---VSELVGGTDEVHSMLRKLVRMLSAKLEGEEQS 765

Query: 729 LVSHDPEVLSDLER------FERMAMVGLWCNHPDPNLRPSMKKVIHML 771
            +  D  + S L R         +  + + C   D + RP+M+  +  L
Sbjct: 766 WI--DGYLDSKLNRPVNYVQARTLIKLAVSCLEEDRSKRPTMEHAVQTL 812

Probable receptor. Interaction with a ligand in the extracellular domain triggers the protein kinase activity of the cytoplasmic domain.

Zea mays (taxid: 4577)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabidopsis thaliana GN=At1g34300 PE=1 SV=1

 Score =  302 bits (773), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 254/809 (31%), Positives = 380/809 (46%), Gaps = 126/809 (15%)

Query: 28  ISLGSSITA-GSNTSWLSPSGDFAFGFY-SLFGGLYLLGIWF-DKIPEKTLVWAADRDSP 84
           I LGS I A GSN +W SP+  F+  F  S     +L  + F   +P    +W+A     
Sbjct: 27  IPLGSVIYASGSNQNWPSPNSTFSVSFVPSPSPNSFLAAVSFAGSVP----IWSA---GT 79

Query: 85  AEAGSKITLTNDGKLLLTYFNGSVQQIYSG-----AASLALMQNDGNFVLKNANSAVVWD 139
            ++   + L   G L LT  NGS   ++         +   +++ G F+L N  S  VW 
Sbjct: 80  VDSRGSLRLHTSGSLRLT--NGSGTTVWDSKTDRLGVTSGSIEDTGEFILLNNRSVPVWS 137

Query: 140 SFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWY 199
           SFD PTDTI+  Q    GK L S          G Y+ +++  GNL L     A   YW 
Sbjct: 138 SFDNPTDTIVQSQNFTAGKILRS----------GLYSFQLERSGNLTLRWNTSAI--YWN 185

Query: 200 TG--------------TVTLNNVSLIFNQ-----SAFMYLINSTGDNIFRLTRNVMTPTE 240
            G              ++  N V  IF       +  +Y  +    N FR  +       
Sbjct: 186 HGLNSSFSSNLSSPRLSLQTNGVVSIFESNLLGGAEIVYSGDYGDSNTFRFLK------- 238

Query: 241 DYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETVTC 300
                  +D  GN + ++     S      W AV D C+V   CG +G+C+ +D   + C
Sbjct: 239 -------LDDDGNLRIYSSASRNSGPVNAHWSAV-DQCLVYGYCGNFGICSYNDTNPI-C 289

Query: 301 NCIP-GYTPLNPSDVSEGCHPETVVNYCAETS-------SKNFTVEVMDDAGFLFDNFAD 352
           +C    +  ++ +D  +GC  +  ++ C+  +       ++ FT E  DD      N   
Sbjct: 290 SCPSRNFDFVDVNDRRKGCKRKVELSDCSGNTTMLDLVHTRLFTYE--DDP-----NSES 342

Query: 353 LARVSNVDVEGCRKAVMDDCYSLGASLVGSTCVKTRMP--LLNARKSASTKGMKAIIKVP 410
               S+     C  +V+  C +  +   GS     + P       +  S     + +KV 
Sbjct: 343 FFAGSSPCRANCLSSVL--CLASVSMSDGSGNCWQKHPGSFFTGYQWPSVPST-SYVKVC 399

Query: 411 TKMSNPSNHEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAIYYSPAARGL----IKRRN 466
             +   +     K ++ NS++ L I  +  A+ A L G+ A+       GL     ++  
Sbjct: 400 GPVVANTLERATKGDDNNSKVHLWI--VAVAVIAGLLGLVAVEI-----GLWWCCCRKNP 452

Query: 467 YFDPNSMEINFREF--------TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEI 518
            F   S      E+        T++ELQ  TK F + +G G  G VYRG+L     +  +
Sbjct: 453 RFGTLSSHYTLLEYASGAPVQFTYKELQRCTKSFKEKLGAGGFGTVYRGVL---TNRTVV 509

Query: 519 AVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL 578
           AVK+LE  IE+  ++F  E+  I  THH NLVRL+GFCS+   RLLVYE M NG+L NFL
Sbjct: 510 AVKQLE-GIEQGEKQFRMEVATISSTHHLNLVRLIGFCSQGRHRLLVYEFMRNGSLDNFL 568

Query: 579 F--HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAK 636
           F     +   W  R  IALG A+G+ YLHEEC   I+HCDIKP+N+L     +D N+ AK
Sbjct: 569 FTTDSAKFLTWEYRFNIALGTAKGITYLHEECRDCIVHCDIKPENIL-----VDDNFAAK 623

Query: 637 ISDFGISKLLN-KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           +SDFG++KLLN KD     +++RGT GY+APEWL N+P+T+K DV+S+G++LLE++ G+R
Sbjct: 624 VSDFGLAKLLNPKDNRYNMSSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLELVSGKR 683

Query: 696 HIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL----VSHDPEVLSDLERFERMAMVGL 751
           + ++S      +      S W        N + +    +S D  V  D+E+  RM     
Sbjct: 684 NFDVSEKTNHKK-----FSIWAYEEFEKGNTKAILDTRLSEDQTV--DMEQVMRMVKTSF 736

Query: 752 WCNHPDPNLRPSMKKVIHMLEGTLEVGMP 780
           WC    P  RP+M KV+ MLEG  E+  P
Sbjct: 737 WCIQEQPLQRPTMGKVVQMLEGITEIKNP 765

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1

 Score =  281 bits (718), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 230/798 (28%), Positives = 374/798 (46%), Gaps = 83/798 (10%)

Query: 28  ISLGSSITAGSNTSWLSPSGDFAFGFYSL-FGGLYLLGIWFDKIPEKTLVWAADRDSPAE 86
           +S   S+T  SN + +SP   F  GF+       + LGIW+  I ++T VW A+RD+P  
Sbjct: 32  LSASESLTISSNNTIVSPGNVFELGFFKPGLDSRWYLGIWYKAISKRTYVWVANRDTPLS 91

Query: 87  AGSKITLTNDGKLLLTYFNGSVQQIYSGAAS--------LALMQNDGNFVLKNA-NSA-- 135
           +       +D  L++   + S   ++S   +        +A + ++GNFVL+++ NSA  
Sbjct: 92  SSIGTLKISDSNLVV--LDQSDTPVWSTNLTGGDVRSPLVAELLDNGNFVLRDSKNSAPD 149

Query: 136 -VVWDSFDFPTDTILP----GQVLLTGKKLYSNS-RGTADYSTGNYTLEMQADGNLVLSA 189
            V+W SFDFPTDT+LP    G    TG   +  S +   D S+G+++ +++ +G   +  
Sbjct: 150 GVLWQSFDFPTDTLLPEMKLGWDAKTGFNRFIRSWKSPDDPSSGDFSFKLETEGFPEIFL 209

Query: 190 YHFADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATID 249
           ++     Y  +G       S +     F Y++ +   +   +T +      D Y R +I 
Sbjct: 210 WNRESRMY-RSGPWNGIRFSGVPEMQPFEYMVFNFTTSKEEVTYSFRITKSDVYSRLSIS 268

Query: 250 GHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETVTCNCIPGYTPL 309
             G  Q+F + + T+  W + W A  D C     CGVYG C S  N +  CNCI G+ P 
Sbjct: 269 SSGLLQRFTWIE-TAQNWNQFWYAPKDQCDEYKECGVYGYCDS--NTSPVCNCIKGFKPR 325

Query: 310 NPS-----DVSEGCHPETVVNYCAETSSKNFTVEVMDDAGFLFDNFADLARVSNVDVEGC 364
           NP      D S+GC  +T+++              + D        A + R   + V+ C
Sbjct: 326 NPQVWGLRDGSDGCVRKTLLSCGGGDGFVRLKKMKLPDT-----TTASVDR--GIGVKEC 378

Query: 365 RKAVMDDCYSLGASLV-----GSTCVKTRMPLLNARKSASTKGMKAIIKVPTKMSNPSNH 419
            +  + DC     +       GS CV     L + R  A       +    T + +  N 
Sbjct: 379 EQKCLRDCNCTAFANTDIRGSGSGCVTWTGELFDIRNYAKGGQDLYVRLAATDLEDKRNR 438

Query: 420 EGK-KKNNFNSRLLLKIGFIFSAICALLSGVAAIYYSPAARGLIKRRNYF---------- 468
             K   ++    +LL + FI   +       + +  +P     ++ R+            
Sbjct: 439 SAKIIGSSIGVSVLLLLSFIIFFLWKRKQKRSILIETPIVDHQLRSRDLLMNEVVISSRR 498

Query: 469 ----DPNSMEINFREFTFQELQEATKGFSKL--VGTGSSGKVYRGILRLKDTQIEIAVKK 522
               + N+ ++      F+E+  AT  FS    +G G  G VY+G  +L D Q E+AVK+
Sbjct: 499 HISRENNTDDLELPLMEFEEVAMATNNFSNANKLGQGGFGIVYKG--KLLDGQ-EMAVKR 555

Query: 523 LEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEG 582
           L K   +  +EF  E+K+I R  H NLVRLL  C +  +++L+YE + N +L + LF + 
Sbjct: 556 LSKTSVQGTDEFKNEVKLIARLQHINLVRLLACCVDAGEKMLIYEYLENLSLDSHLFDKS 615

Query: 583 Q--RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMA-KISD 639
           +  +  W  R +I  G+ARGLLYLH++   +IIH D+K  N+LLD       YM  KISD
Sbjct: 616 RNSKLNWQMRFDIINGIARGLLYLHQDSRFRIIHRDLKASNILLD------KYMTPKISD 669

Query: 640 FGISKLLNKDQTRTDT-NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIE 698
           FG++++  +D+T  +T  + GT GY++PE+  +   + K DVFSFGV+LLEII  +R+  
Sbjct: 670 FGMARIFGRDETEANTRKVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIISSKRNKG 729

Query: 699 LSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFE-----RMAMVGLWC 753
               + +   +  V  +W       + L+++   DP +      F      R   +GL C
Sbjct: 730 FYNSDRDLNLLGCVWRNW----KEGKGLEII---DPIITDSSSTFRQHEILRCIQIGLLC 782

Query: 754 NHPDPNLRPSMKKVIHML 771
                  RP+M  VI ML
Sbjct: 783 VQERAEDRPTMSLVILML 800

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q09092|SRK6_BRAOE Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=2

 Score =  279 bits (713), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 243/805 (30%), Positives = 383/805 (47%), Gaps = 95/805 (11%)

Query: 28  ISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSP-AE 86
           +S   S+T  SN + +SP   F  GF+      YL G+W+ K+ ++T VW A+RD+P + 
Sbjct: 36  LSSTESLTISSNKTLVSPGSIFEVGFFRTNSRWYL-GMWYKKVSDRTYVWVANRDNPLSN 94

Query: 87  AGSKITLTNDGKLLLTYFNGSV--QQIYSG---AASLALMQNDGNFVLKNAN----SAVV 137
           A   + ++ +  +LL + N  V    +  G   +  +A +  +GNFV+++++    S  +
Sbjct: 95  AIGTLKISGNNLVLLDHSNKPVWWTNLTRGNERSPVVAELLANGNFVMRDSSNNDASEYL 154

Query: 138 WDSFDFPTDTILP----GQVLLTG-KKLYSNSRGTADYSTGN--YTLEMQADGNLVLSAY 190
           W SFD+PTDT+LP    G  L TG  +  ++ R + D S+GN  Y LE Q+     LS  
Sbjct: 155 WQSFDYPTDTLLPEMKLGYNLKTGLNRFLTSWRSSDDPSSGNFSYKLETQSLPEFYLSRE 214

Query: 191 HFADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDN------IFRLTRNVMTPTEDYYH 244
           +F  P +  +G       S I       Y++ +  +N       FR+T N       +Y 
Sbjct: 215 NF--PMH-RSGPWNGIRFSGIPEDQKLSYMVYNFIENNEEVAYTFRMTNN------SFYS 265

Query: 245 RATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDP-CIVNCICGVYGMCTSSDNETVTCNCI 303
           R T+   G FQ+  ++ S    W R W +  DP C    +CG Y  C    N +  CNCI
Sbjct: 266 RLTLISEGYFQRLTWYPSIRI-WNRFWSSPVDPQCDTYIMCGPYAYCDV--NTSPVCNCI 322

Query: 304 PGYTPLNPSDVSE-----GCHPETVVNYCAETSSKNFTVEVMDDAGFLFDNFADLARVSN 358
            G+ P N     +     GC   T ++     S   FT   M          A + R  +
Sbjct: 323 QGFNPRNIQQWDQRVWAGGCIRRTQLS----CSGDGFT--RMKKMKLPETTMATVDR--S 374

Query: 359 VDVEGCRKAVMDDCYSLGASLV-----GSTCVKTRMPLLNARKSASTKGMKAIIKVPTKM 413
           + V+ C+K  + DC     +       GS CV     L + R  A+     AI      +
Sbjct: 375 IGVKECKKRCISDCNCTAFANADIRNGGSGCVIWTERLEDIRNYAT----DAIDGQDLYV 430

Query: 414 SNPSNHEGKKKNNFNSRLLLKIG----FIFSAICALLSGVAAIYYSPAARGLIKRRNYFD 469
              +    KK+N     + L +G     +    C           S  +    +R     
Sbjct: 431 RLAAADIAKKRNASGKIISLTVGVSVLLLLIMFCLWKRKQKRAKASAISIANTQRNQNLP 490

Query: 470 PNSMEINFR-----EFTFQELQ----------EATKGFSKL--VGTGSSGKVYRGILRLK 512
            N M ++ +     E+ F+EL+          +AT+ FS    +G G  G VY+G  RL 
Sbjct: 491 MNEMVLSSKREFSGEYKFEELELPLIEMETVVKATENFSSCNKLGQGGFGIVYKG--RLL 548

Query: 513 DTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG 572
           D + EIAVK+L K   +  +EFM E+ +I R  H NLV++LG C E D+++L+YE + N 
Sbjct: 549 DGK-EIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENL 607

Query: 573 TLSNFLFHEGQRP--GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD 630
           +L ++LF + +R    W +R +I  GVARGLLYLH++   +IIH D+K  N+L     LD
Sbjct: 608 SLDSYLFGKTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNIL-----LD 662

Query: 631 TNYMAKISDFGISKLLNKDQTRTDT-NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLE 689
            N + KISDFG++++  +D+T  +T  + GT GY++PE+      + K DVFSFGV++LE
Sbjct: 663 KNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLE 722

Query: 690 IICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLV---SHDPEVLSDLERFERM 746
           I+ G+++     ++ E++ +  V S W     L     V+V   S  P +    E   + 
Sbjct: 723 IVSGKKNRGFYNLDYENDLLSYVWSRWKEGRALEIVDPVIVDSLSSQPSIFQPQEVL-KC 781

Query: 747 AMVGLWCNHPDPNLRPSMKKVIHML 771
             +GL C       RP+M  V+ M 
Sbjct: 782 IQIGLLCVQELAEHRPAMSSVVWMF 806

Involved in sporophytic self-incompatibility system (the inability of flowering plants to achieve self-fertilization), probably acting in combination with S-locus-specific glycoproteins. Interaction with a ligand in the extracellular domain triggers the protein kinase activity of the cytoplasmic domain.

Brassica oleracea var. acephala (taxid: 3713)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8RWZ5|SD25_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana GN=SD25 PE=1 SV=1

 Score =  278 bits (712), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 223/763 (29%), Positives = 344/763 (45%), Gaps = 73/763 (9%)

Query: 49  FAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSV 108
           F FGF +    + L  +         L+W+A+R SP     K    ++G +++       
Sbjct: 55  FGFGFVTTQDSVTLFTLSIIHKSSTKLIWSANRASPVSNSDKFVFDDNGNVVMEGTEVWR 114

Query: 109 QQIYSGAASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTA 168
                  AS   +++ GN V+ + +   +W+SFD PTDT++  Q    G KL S    + 
Sbjct: 115 LDNSGKNASRIELRDSGNLVVVSVDGTSIWESFDHPTDTLITNQAFKEGMKLTS----SP 170

Query: 169 DYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDNI 228
             S   Y LE+++ G++VLS        YW       N    I N+   +   +S   N 
Sbjct: 171 SSSNMTYALEIKS-GDMVLSVNSLTPQVYWSMA----NARERIINKDGGVVTSSSLLGNS 225

Query: 229 FRL--TRNVM-------TPTEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCI 279
           +R    + V+          +D      + G+     F+   S +S      +  +D C 
Sbjct: 226 WRFFDQKQVLLWQFVFSDNKDDNTTWIAVLGNNGVISFSNLGSGASAADSSTKIPSDLCG 285

Query: 280 VNCICGVYGMCTSSDNETVTCNCIPGYTPLNPSDVSEGCHPETVVNYCAETSSKNFTVEV 339
               CG Y +C+ S      C C+ G +    SD   G     + + C +T         
Sbjct: 286 TPEPCGPYYVCSGSK----VCGCVSGLSRAR-SDCKTG-----ITSPCKKTKDNATLPLQ 335

Query: 340 MDDAGFLFDNFA---DLARVSNVDVEGCRKAVMDDCYSLGASLVGSTCVKTRMPLLNARK 396
           +  AG   D FA           D++ C++   ++C  LG     S+        + + K
Sbjct: 336 LVSAGDGVDYFALGYAPPFSKKTDLDSCKEFCHNNCSCLGLFFQNSSGNCFLFDYIGSFK 395

Query: 397 SAST--KGMKAIIKVPTKMSNPSNHEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAIYY 454
           ++     G  + IK+ +  S   ++      +F   +++ +  +F     +         
Sbjct: 396 TSGNGGSGFVSYIKIASTGSGGGDNGEDDGKHFPYVVIIVVVTVFIIAVLIF-------- 447

Query: 455 SPAARGLIKRRNYF----DPNSMEINFRE--------FTFQELQEATKGFSKLVGTGSSG 502
              A  + KR+         +S E NF E        F +++LQ AT  FS  +G G  G
Sbjct: 448 --VAFRIHKRKKMILEAPQESSEEDNFLENLSGMPIRFAYKDLQSATNNFSVKLGQGGFG 505

Query: 503 KVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR 562
            VY G L        +AVKKLE  I +  +EF  E+ IIG  HH +LVRL GFC+E   R
Sbjct: 506 SVYEGTL---PDGSRLAVKKLE-GIGQGKKEFRAEVSIIGSIHHLHLVRLRGFCAEGAHR 561

Query: 563 LLVYELMPNGTLSNFLFHEGQRP---GWVQRVEIALGVARGLLYLHEECETQIIHCDIKP 619
           LL YE +  G+L  ++F +        W  R  IALG A+GL YLHE+C+ +I+HCDIKP
Sbjct: 562 LLAYEFLSKGSLERWIFRKKDGDVLLDWDTRFNIALGTAKGLAYLHEDCDARIVHCDIKP 621

Query: 620 QNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVD 679
           +N+LLD      N+ AK+SDFG++KL+ ++Q+   T MRGT GY+APEW+ N  ++ K D
Sbjct: 622 ENILLD-----DNFNAKVSDFGLAKLMTREQSHVFTTMRGTRGYLAPEWITNYAISEKSD 676

Query: 680 VFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHD-PEVLS 738
           V+S+G++LLE+I GR++ + S   E+          +    M    L  +V      V  
Sbjct: 677 VYSYGMVLLELIGGRKNYDPSETSEKCH-----FPSFAFKKMEEGKLMDIVDGKMKNVDV 731

Query: 739 DLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMPP 781
             ER +R     LWC   D   RPSM KV+ MLEG   V  PP
Sbjct: 732 TDERVQRAMKTALWCIQEDMQTRPSMSKVVQMLEGVFPVVQPP 774

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O65238|Y5537_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana GN=At5g35370 PE=2 SV=2

 Score =  274 bits (700), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 234/793 (29%), Positives = 379/793 (47%), Gaps = 86/793 (10%)

Query: 43  LSPSGDFAFGFYSLFGGLYLLGIWFD--KIPEKTLVWAADRDSPAEAGSKITLT------ 94
           LS +  F  G +S  G     G +F    +   + +W+++RDSP  +   + LT      
Sbjct: 51  LSRNSIFKAGLFSPGGDDSSTGFYFSVVHVDSGSTIWSSNRDSPVSSSGTMNLTPQGISV 110

Query: 95  -NDGKLLLTYFNGSVQQIYSGAASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQV 153
             DGK  +  ++  V  + S   SL L  + GN +L +  +  +W+SFDFPTD+I+ GQ 
Sbjct: 111 IEDGKSQIPVWSTPV--LASPVKSLRLT-DAGNLLLLDHLNVSLWESFDFPTDSIVLGQR 167

Query: 154 LLTGKKLYSNSRGTADYSTGNYT-LEMQADGNLVLSAYHFADPGYWYTGTVTLNNVSLIF 212
           L  G  L S S   +D+STG+Y  L  ++DG +      +    YW        NV   F
Sbjct: 168 LKLGMFL-SGSVSRSDFSTGDYKFLVGESDGLM-----QWRGQNYWKLRMHIRANVDSNF 221

Query: 213 N------QSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQQFAYHKSTSSR 266
                   ++ + L+   G  +  + R  + P+ D+   A +D  G   +F   + +   
Sbjct: 222 PVEYLTVTTSGLALMARNGTVV--VVRVALPPSSDF-RVAKMDSSG---KFIVSRFSGKN 275

Query: 267 WTRVWRAVNDPCIVNCICGVYGMCT---SSDNETVTCNCIPGYTPLNPSDVSEG-CHP-E 321
               +    D C +  +CG  G+C    +S+N++ +C   P    +   D  +G C P  
Sbjct: 276 LVTEFSGPMDSCQIPFVCGKLGLCNLDNASENQSCSC---PDEMRM---DAGKGVCVPVS 329

Query: 322 TVVNYCAETSSKNFT-VEVMDDAGFLFDNFADLARVSNVDVEGCRKAVMDDCYSLGASL- 379
             ++      ++N + +E+     +   +F D      + +  C      +C  LG    
Sbjct: 330 QSLSLPVSCEARNISYLELGLGVSYFSTHFTDPVE-HGLPLLACHDICSKNCSCLGVFYE 388

Query: 380 -VGSTC--VKTRMPLLN-ARKSASTKGMKAIIKVPTKMSN--PSNHEGKKKNNFNSRLLL 433
               +C  VK     L+  + S     +   +K+  + +N  P  +  +  ++F    L+
Sbjct: 389 NTSRSCYLVKDSFGSLSLVKNSPENHDLIGYVKLSIRKTNAQPPGNNNRGGSSFPVIALV 448

Query: 434 KI---GFIFSAICALL--SGVAAIYYSPAARGLIKRRNYF---DPNSMEINF--REFTFQ 483
            +   GF       LL     A + YS      + R   F   D  S  I    ++F F+
Sbjct: 449 LLPCSGFFLLIALGLLWWRRCAVMRYSSIREKQVTRPGSFESGDLGSFHIPGLPQKFEFE 508

Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           EL++AT+ F   +G+G  G VY+G L     +  IAVKK+        +EF TE+ IIG 
Sbjct: 509 ELEQATENFKMQIGSGGFGSVYKGTL---PDETLIAVKKITNHGLHGRQEFCTEIAIIGN 565

Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP--GWVQRVEIALGVARGL 601
             H NLV+L GFC+   + LLVYE M +G+L   LF  G  P   W +R +IALG ARGL
Sbjct: 566 IRHTNLVKLRGFCARGRQLLLVYEYMNHGSLEKTLF-SGNGPVLEWQERFDIALGTARGL 624

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YLH  C+ +IIHCD+KP+N+LL       ++  KISDFG+SKLLN++++   T MRGT 
Sbjct: 625 AYLHSGCDQKIIHCDVKPENILLH-----DHFQPKISDFGLSKLLNQEESSLFTTMRGTR 679

Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIEL-SRVEEESEE--VDIVLSDWVI 718
           GY+APEW+ N  ++ K DV+S+G++LLE++ GR++    SR    +E+   +   +    
Sbjct: 680 GYLAPEWITNAAISEKADVYSYGMVLLELVSGRKNCSFRSRSNSVTEDNNQNHSSTTTTS 739

Query: 719 SCMLSRNLQVLVSH---------DPEVLSDL--ERFERMAMVGLWCNHPDPNLRPSMKKV 767
           + ++   L  L  H         DP +   +  +  E++  + L C H +P LRP+M  V
Sbjct: 740 TGLVYFPLYALDMHEQGRYMELADPRLEGRVTSQEAEKLVRIALCCVHEEPALRPTMAAV 799

Query: 768 IHMLEGTLEVGMP 780
           + M EG++ +G P
Sbjct: 800 VGMFEGSIPLGNP 812

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	788
147827610	785	hypothetical protein VITISV_037411 [Viti	0.988	0.992	0.672	0.0
224123816	787	predicted protein [Populus trichocarpa]	0.991	0.992	0.680	0.0
357480847	783	Cysteine-rich receptor-like protein kina	0.968	0.974	0.578	0.0
224123812	789	predicted protein [Populus trichocarpa]	0.982	0.980	0.577	0.0
225432626	785	PREDICTED: G-type lectin S-receptor-like	0.959	0.963	0.571	0.0
225432630	782	PREDICTED: G-type lectin S-receptor-like	0.955	0.962	0.576	0.0
225432634	787	PREDICTED: G-type lectin S-receptor-like	0.959	0.960	0.561	0.0
225432640	770	PREDICTED: G-type lectin S-receptor-like	0.963	0.985	0.525	0.0
359477337	749	PREDICTED: G-type lectin S-receptor-like	0.911	0.958	0.544	0.0
147827611	800	hypothetical protein VITISV_037412 [Viti	0.939	0.925	0.533	0.0

>gi|147827610|emb|CAN77456.1| hypothetical protein VITISV_037411 [Vitis vinifera]

 Score = 1123 bits (2904), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 531/790 (67%), Positives = 641/790 (81%), Gaps = 11/790 (1%)

Query: 1   MALKRIVPCVLTLILKFYGLHGQTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGL 60
           MA+  ++  +L L   F+G + Q   NISLGSSITAGSN SW SPSGDFAFGFY L  GL
Sbjct: 1   MAVALMISWLLVLFSSFHGFYAQIPQNISLGSSITAGSNASWRSPSGDFAFGFYHLTSGL 60

Query: 61  YLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSG--AASL 118
           YL+GIWFD+I E+TLVW+A+RD PAE GS + LT+DG+L L+Y NGS Q IYSG  AASL
Sbjct: 61  YLVGIWFDEISERTLVWSANRDKPAETGSTVQLTSDGQLELSYVNGSTQSIYSGSDAASL 120

Query: 119 ALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLE 178
             MQ++GNFVLK+ANS  +W SF FPTDT+LPGQV+   +KLYSN + + +YSTGN+ L 
Sbjct: 121 GFMQDNGNFVLKDANSFDIWQSFSFPTDTLLPGQVVNQTQKLYSNEKESVNYSTGNFMLA 180

Query: 179 MQADGNLVLSAYHFADPGYWYTGTVTLNNVSLIFN-QSAFMYLINSTGDNIFRLTRNVMT 237
           MQ+DGNLVLSAYHFADPGYW T T  ++ VSL+F+ Q+A MYL+NS+  NI+ LT+N+ T
Sbjct: 181 MQSDGNLVLSAYHFADPGYWDTSTF-VSTVSLVFDEQTALMYLVNSSNVNIWPLTKNIST 239

Query: 238 PTEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNET 297
           P EDYYHRATID HGNFQQ+ Y K     W RVWRAV +PC+VN ICGVYG CTS DNET
Sbjct: 240 PVEDYYHRATIDDHGNFQQYVYPKVNGRNWERVWRAVEEPCLVNSICGVYGFCTSPDNET 299

Query: 298 VTCNCIPGYTPLNPSDVSEGCHPETVVNYCAETSSKNFTVEVMDDAGFLFDNFADLARVS 357
           V+C+C+PGY PL+P+D+S+GC PE V+NYCA+ S +NFTVEV+DDA F F+N ADLARV 
Sbjct: 300 VSCSCLPGYIPLDPNDLSKGCRPEIVLNYCADPSMRNFTVEVIDDADFPFENSADLARVR 359

Query: 358 NVDVEGCRKAVMDDCYSLGASLVGSTCVKTRMPLLNARKSASTKGMKAIIKVPTKMSNPS 417
           NVDVEGC+KAVMDDCY+L A+LV S C+K +MPLLNARKS STKG+KA+IKVP K+++P 
Sbjct: 360 NVDVEGCKKAVMDDCYTLAAALVDSRCIKKKMPLLNARKSVSTKGIKALIKVPMKINDPG 419

Query: 418 NHEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAIYYSPAARGLIKRRNYFDPNSMEINF 477
                KK N N R+ L +GFI S + A+LS   A+YY P AR L+KR+++ + N++ INF
Sbjct: 420 ML--PKKKNSNDRVYLTVGFITSGVLAVLSAAFAVYYHPVARRLVKRKHFQNANAIGINF 477

Query: 478 REFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTE 537
           R+FTFQEL EAT GFSK +G GSSGKV+ GIL  KD  IEIAVKKLEK IEK  +EF+TE
Sbjct: 478 RQFTFQELHEATNGFSKTIGRGSSGKVFSGILSSKDLHIEIAVKKLEKAIEKGEKEFVTE 537

Query: 538 LKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           LKIIGRTHHKNLVRLLGFC E+  +LLVYELM NGTLS+FLF + ++P W+QR E+ALG+
Sbjct: 538 LKIIGRTHHKNLVRLLGFCIEDGHQLLVYELMKNGTLSDFLFGKEEKPIWIQRAEMALGI 597

Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
           ARGLLYLHEECETQIIHCDIKPQNVL     LD NY AKI+DFG+SKLLNKDQT+T TN+
Sbjct: 598 ARGLLYLHEECETQIIHCDIKPQNVL-----LDANYTAKIADFGLSKLLNKDQTKTITNI 652

Query: 658 RGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV 717
           RGTMGY+APEWLRN  VT KVD++SFGVMLLEIICGRRHIELSRVEEE+E+ D+V++DWV
Sbjct: 653 RGTMGYLAPEWLRNAAVTAKVDIYSFGVMLLEIICGRRHIELSRVEEETEDDDLVITDWV 712

Query: 718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEV 777
           +SCM+SR L+ LV HD EVL D +RFERMA+VGLWC HPDP LRPS+KKV  MLEGT+EV
Sbjct: 713 LSCMISRKLEKLVGHDSEVLDDFKRFERMALVGLWCVHPDPILRPSIKKVTQMLEGTVEV 772

Query: 778 GMPPLLHDQM 787
           G+PPLL++ M
Sbjct: 773 GIPPLLYEHM 782

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123816|ref|XP_002319171.1| predicted protein [Populus trichocarpa] gi|222857547|gb|EEE95094.1| predicted protein [Populus trichocarpa]

 Score = 1117 bits (2889), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/791 (68%), Positives = 637/791 (80%), Gaps = 10/791 (1%)

Query: 1   MALKRIVPCVLTLILKFYGLHGQTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGL 60
           M +++I+P +L   L F+ LH Q  PNISLGSSI AGS  SW S S +FAFGFYSL   L
Sbjct: 1   MTIQKILPFLLLQFLYFHELHAQIPPNISLGSSIKAGSGNSWRSLSDEFAFGFYSLPNNL 60

Query: 61  YLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSGA-ASLA 119
           YL+GIWF+KIPEKTLVW+A+RDSPA AGS + LT DG+L LT+ NGS+Q IY G  A L 
Sbjct: 61  YLVGIWFNKIPEKTLVWSANRDSPAAAGSTVRLTFDGQLTLTHLNGSIQSIYRGRRAGLG 120

Query: 120 LMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEM 179
            M NDGNFVL++ +S+V+W SF+ PTDTILPGQVL   +KLYSN+ GT DYSTGN+ L+M
Sbjct: 121 FMLNDGNFVLRDDSSSVIWQSFNSPTDTILPGQVLSDDQKLYSNANGTVDYSTGNFMLQM 180

Query: 180 QADGNLVLSAYHFADPGYWYTGTVTLNNVSLIF-NQSAFMYLINSTGDNIFRLTRNVMTP 238
           Q DGNLVLSAYHF+DPGYWYTGTV  NNVSL+F N + FMYL+NSTGDNI+ LTRNV TP
Sbjct: 181 QFDGNLVLSAYHFSDPGYWYTGTVR-NNVSLVFSNHTFFMYLVNSTGDNIYPLTRNVSTP 239

Query: 239 TEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETV 298
             DYYHRATI+ HG+FQQFAYHKS SS WTRVWRA+++PC+VN ICGVYGMC S +NET 
Sbjct: 240 VGDYYHRATINDHGDFQQFAYHKSNSSGWTRVWRAIDEPCVVNAICGVYGMCFSLNNETA 299

Query: 299 TCNCIPGYTPLNPSDVSEGCHPETVVNYCAETSSKNFTVEVMDDAGFLFDNFADLARVSN 358
           TC CIPGY PL+P+ VS+GC PETVVNYCA+ S +NFT+ V+DDA F F++ ADLARV N
Sbjct: 300 TCKCIPGYIPLDPNHVSKGCRPETVVNYCADPSMRNFTINVIDDADFPFESDADLARVKN 359

Query: 359 VDVEGCRKAVMDDCYSLGASLVGSTCVKTRMPLLNARKSASTKGMKAIIKVPTKMSNPSN 418
           VD+EGC+KA+MDDCYSL ASLV S C+K RMPLLNARKS STKG +A++KVP K SNP  
Sbjct: 360 VDLEGCKKALMDDCYSLSASLVDSRCIKKRMPLLNARKSFSTKGRQALVKVPMK-SNPGI 418

Query: 419 HEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAIYYSPAARGLIKRRNYFDPNSMEINFR 478
            E KK N+F++R+ LKI  I +A  A   GV+AIYY PA R  IKR+ Y + NS+ INF+
Sbjct: 419 QEHKKNNDFDTRVFLKISLIVTATLAFCFGVSAIYYHPAPRRFIKRKRYSNANSIGINFQ 478

Query: 479 EFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTEL 538
           EF + ELQ+AT GFSK +G GSS KVY GIL +KD QI+IAVK L K IEK  +EFMTEL
Sbjct: 479 EFKYLELQKATNGFSKTLGRGSSAKVYSGILSMKDIQIDIAVKVLTKSIEKGEKEFMTEL 538

Query: 539 KIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEG-QRPGWVQRVEIALGV 597
           KIIGRT+HKNLVRLLGFC E D++LLVYELM NG+L+N LF +G +RP WV+R E+ L +
Sbjct: 539 KIIGRTYHKNLVRLLGFCVENDQQLLVYELMANGSLANLLFGKGSERPNWVRRAEMVLEI 598

Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
           ARGLLYLH+ECE QIIHCDIKP+NVL     +D NY AK++DFG+SKLLNKDQTRTDTN+
Sbjct: 599 ARGLLYLHDECEAQIIHCDIKPENVL-----IDNNYTAKLADFGLSKLLNKDQTRTDTNL 653

Query: 658 RGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV 717
           RGT+GY+APEW+RN  VT+KVDV+SFGVMLLEI+C RRHIE SRVEEESEE D+VLSDWV
Sbjct: 654 RGTVGYLAPEWIRNERVTSKVDVYSFGVMLLEILCCRRHIEPSRVEEESEEDDLVLSDWV 713

Query: 718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEV 777
           ISCM +  L  +V HDPEVLSD +RFERM +VGLWC HPD   RPSMKKV  MLEGT E+
Sbjct: 714 ISCMAAGKLGTVVGHDPEVLSDFKRFERMTLVGLWCIHPDAMSRPSMKKVTQMLEGTSEI 773

Query: 778 GMPPLLHDQMS 788
           G+PP L DQMS
Sbjct: 774 GIPPSLSDQMS 784

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357480847|ref|XP_003610709.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355512044|gb|AES93667.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]

 Score =  938 bits (2425), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/798 (57%), Positives = 584/798 (73%), Gaps = 35/798 (4%)

Query: 1   MALKRIVPCV-LTLILKFYGLHGQTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGG 59
           M+L   +PC+ L LI     L+      I L SSITAGSN++W SPSG F FGFY L  G
Sbjct: 1   MSLAMFLPCIILVLISSLNVLYA-----IDLKSSITAGSNSTWKSPSGYFEFGFYPLPNG 55

Query: 60  LYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQI------YS 113
           L+L GIWF KIP+KT VW   +    E  S + LT++G LL+TY NG+          YS
Sbjct: 56  LFLPGIWFAKIPQKTFVWY--QTPSVETNSLLQLTSEGHLLITYPNGTTSHTIDNIGGYS 113

Query: 114 GAASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTG 173
            AA+ A MQ+DGNFVLK++N   VWDSF+ P++TILPGQ L + + LYS  +G ++YS G
Sbjct: 114 EAANSAYMQDDGNFVLKDSNLRTVWDSFNSPSNTILPGQTLKSNQILYSKGKGDSNYSMG 173

Query: 174 NYTLEMQADGNLVLSAYHFADPGYWYTGTVTLNNVSLIFNQ-SAFMYLINSTGDNIFRLT 232
           N+ LEMQADGNL+L A+ ++DP YWYT T+ ++N+SL+FN+ S+ +YL    G+ I+ LT
Sbjct: 174 NFMLEMQADGNLILKAHQWSDPSYWYTSTL-VSNLSLVFNETSSLLYLATGIGNIIYSLT 232

Query: 233 RNVMTPTEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTS 292
           ++  TP +DYYHRATID +GNFQQ+ YHK   + W RVWRA++DPC V+ +CG+YG+CTS
Sbjct: 233 KSTPTPVKDYYHRATIDENGNFQQYVYHKRNGTNWERVWRAIDDPCRVDYVCGIYGLCTS 292

Query: 293 SDNETVTCNCIPGYTPLNPSDVSEGCHPETVVNYCAETSSKNFTVEVMDDAGFLFDNFAD 352
            DNE+V C CI GY PL+  DVS+GC P+TV+NYC+  S  NF + V DD  F F  + D
Sbjct: 293 PDNESVNCECIQGYIPLDQEDVSKGCRPKTVINYCSGPSMMNFELRVFDDTDFQF--YPD 350

Query: 353 LARVSNVDVEGCRKAVMDDCYSLGASLVG--STCVKTRMPLLNARKSASTKGMKAIIKVP 410
            A +++VD+E C+K+V+DDC  + A+     STC K RMPLLNAR S+S+KG KA++KVP
Sbjct: 351 FALINDVDLESCKKSVIDDCNIIAATYNSSTSTCAKKRMPLLNARNSSSSKGQKALLKVP 410

Query: 411 TKMSNPSNHEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAIYYSPAARGLIKRR-NYFD 469
              +  +  E  K  +FN R+ LK+    SA  A   G  A YY P  + LI RR  Y +
Sbjct: 411 YSNNESNTIEVSKNKSFNVRVFLKVMVAISATLACFFGALAAYYHPFVKRLITRRKKYLN 470

Query: 470 PNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK 529
             ++ INFREFTFQEL EAT GFS+++G GSSGKVY G L + DT+I IAVKKLEK IEK
Sbjct: 471 ATAIGINFREFTFQELHEATDGFSRILGRGSSGKVYHGTLIIDDTEIGIAVKKLEKKIEK 530

Query: 530 TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQ 589
           +  EFMTELKIIG THHKNLV+LLGFC E++ RLLVYELMPNG LS+ LF EG+RP W Q
Sbjct: 531 SENEFMTELKIIGLTHHKNLVKLLGFCMEDNHRLLVYELMPNGALSSLLFGEGERPQWSQ 590

Query: 590 RVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
           RVE+ALG+ARGLLYLHEECETQIIHCDIKPQNVL     LD N++AKI+DFG+SKLLNKD
Sbjct: 591 RVEMALGIARGLLYLHEECETQIIHCDIKPQNVL-----LDANHIAKIADFGLSKLLNKD 645

Query: 650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEV 709
           QTRT TN RGT+GY+APEWLR+ P+T KVDVFS+GVMLLEIIC RR          SE+ 
Sbjct: 646 QTRTSTNFRGTIGYIAPEWLRSAPITAKVDVFSYGVMLLEIICCRRG---------SEDD 696

Query: 710 DIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH 769
           D+VL + V+ CM++R L+++VSHD EVL+D +RFE+MA+VGLWC HP+P LRPSMKKV  
Sbjct: 697 DLVLVNLVLRCMVTRKLEIVVSHDLEVLNDFKRFEQMALVGLWCLHPNPTLRPSMKKVTQ 756

Query: 770 MLEGTLEVGMPPLLHDQM 787
           MLEGT+EVG+PPLL+DQM
Sbjct: 757 MLEGTVEVGVPPLLYDQM 774

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123812|ref|XP_002319170.1| predicted protein [Populus trichocarpa] gi|222857546|gb|EEE95093.1| predicted protein [Populus trichocarpa]

 Score =  914 bits (2363), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/793 (57%), Positives = 574/793 (72%), Gaps = 19/793 (2%)

Query: 6   IVPCVLTLILKFYGLHGQ---TSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYL 62
           IV   L  +L F     Q   T+  I+LG+SITAG+N+SW SPSGDFAFGFY L  G++L
Sbjct: 4   IVLWCLPFVLSFLCSLAQPQITTNTINLGASITAGTNSSWRSPSGDFAFGFYPLLNGMFL 63

Query: 63  LGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSG--AASLAL 120
           +GIWFDKIPE+TLVW+A+RD PA  GS I  T DG+L+LT+ NG+   IY+G   AS AL
Sbjct: 64  VGIWFDKIPERTLVWSANRDDPARTGSTINFTLDGQLVLTHSNGTGYLIYNGTFGASSAL 123

Query: 121 MQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQ 180
           MQNDGNFV+K  +S V+W SFD PT+TIL GQVL+ GKKLYSN+ GT DYSTG Y LE+Q
Sbjct: 124 MQNDGNFVVKTNSSEVIWQSFDSPTNTILLGQVLVMGKKLYSNANGTVDYSTGQYMLELQ 183

Query: 181 ADGNLVLSAYHFADPGYWYTGTVTLNNVSLIFNQS-AFMYLINSTGDNIFRLTRNVMTPT 239
            DGN+V+SAY FADPGYW+T T    NVSLIFNQS AFMY++N T    +R+T  V TP 
Sbjct: 184 MDGNVVMSAYKFADPGYWFTLTEGNQNVSLIFNQSTAFMYVVNHTSIT-YRMTSQVPTPI 242

Query: 240 EDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVN---DPCIVNCICGVYGMCTSSDNE 296
            DYYHRATI+ HGN QQF YHK   S WT VW   +   +PCI   ICGVYG CTS DN 
Sbjct: 243 GDYYHRATINDHGNLQQFVYHKENGSGWTVVWEPESIKAEPCIPFNICGVYGFCTSIDNT 302

Query: 297 TVTCNCIPGYTPLNPSDVSEGCHPETVVNYCAETSS-KNFTVEVMDDAGFLFDNFADLAR 355
           T+ C+C+PGY+P +PS  S+GC+P+TV+++CA  SS  NFT+E +D+A F    FAD+AR
Sbjct: 303 TINCDCLPGYSPWDPSIPSKGCYPDTVIDFCAPNSSASNFTLEEIDNADFPNGAFADMAR 362

Query: 356 VSNVDVEGCRKAVMDDCYSLGASLVGSTCVKTRMPLLNARKS-ASTKGMKAIIKVPTKMS 414
           V+  DVE CRKA+MDDC+++   LV S C K R PLLNAR+S  ST  + A IK+P   +
Sbjct: 363 VTPADVEECRKAIMDDCFAVAGVLVESVCYKKRTPLLNARRSIPSTNNIVAFIKIPK--A 420

Query: 415 NPSNHEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAIYYSPAARGLIKRRNYFDPNSME 474
           N +N    K ++  S + L  G +  +I  LL    +IY+ P A+  I ++    P  +E
Sbjct: 421 NNNNQIQDKDDDSPSWIALLAGLLLCSIMTLLFATISIYHHPLAQPYISKKQLPVPKPVE 480

Query: 475 INFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF 534
           IN + F+FQEL +AT G    +G G+ G VY G+L L+  ++EIAVKKLEK IE+  +EF
Sbjct: 481 INLKAFSFQELLQATNGLRNKLGRGAFGTVYSGVLTLEAEEVEIAVKKLEKVIEQGEKEF 540

Query: 535 MTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIA 594
           +TE+++IG THHKNLVRL+GFC+E++ RLLVYEL+ NGTLS+FLF E +RP W QR E  
Sbjct: 541 LTEVQVIGLTHHKNLVRLVGFCNEKNHRLLVYELVKNGTLSDFLFGEERRPSWDQRAETV 600

Query: 595 LGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD 654
            G+ARGLLYLHEECETQIIHCDIKPQNVL     LD NY AKI+DFG++KLL KDQTRT 
Sbjct: 601 YGIARGLLYLHEECETQIIHCDIKPQNVL-----LDKNYTAKIADFGLAKLLKKDQTRTS 655

Query: 655 TNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS 714
           T +RGTMGY+APEWL+N PVTTKVDV+SFGV+LLEII  R+HIEL +V E +E+ +++L 
Sbjct: 656 TKVRGTMGYMAPEWLKNAPVTTKVDVYSFGVVLLEIIFCRKHIELHQVNESTEDNEMILI 715

Query: 715 DWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT 774
           DWV+  + + NL  +VSHD EVL D  RFERM +VGLWC  P+P LRPSM KV  MLEGT
Sbjct: 716 DWVLCNVRAGNLHAIVSHDSEVLEDFCRFERMVLVGLWCICPNPTLRPSMNKVTQMLEGT 775

Query: 775 LEVGMPPLLHDQM 787
            EV  PPL+  Q+
Sbjct: 776 SEVDDPPLIDAQI 788

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432626|ref|XP_002278028.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Vitis vinifera]

 Score =  899 bits (2322), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/773 (57%), Positives = 571/773 (73%), Gaps = 17/773 (2%)

Query: 19  GLHGQTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWA 78
           G H Q   NISLGSS    +N+SWLS SGDFAFGFY L GGL+LLGIWF+KIPEKT+VW+
Sbjct: 19  GSHAQVKGNISLGSSFDTHTNSSWLSLSGDFAFGFYPLPGGLFLLGIWFNKIPEKTVVWS 78

Query: 79  ADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSGA--ASLALMQNDGNFVLKNANSAV 136
           A+RD+PA AGS + LT  G L+LT+ NG+V QI +GA  A+ A +QN+GN VL+N  S+V
Sbjct: 79  ANRDAPAPAGSSVNLTLAGSLVLTFPNGTVSQISNGASAANSASLQNNGNLVLRNFVSSV 138

Query: 137 VWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPG 196
           VW SFD PTDT+L GQ +    +LYSN+ GT DYSTG + LE+  DGN+VL+ + +AD G
Sbjct: 139 VWQSFDNPTDTLLLGQKVPWDHRLYSNANGTVDYSTGKFMLEVGTDGNVVLATFRWADSG 198

Query: 197 YWYTGTVTLNNVSLIFNQS-AFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQ 255
           YW+T T+   NVSL+FN+S A MY+ N T   I+RLT NV TP + YYHRAT++  GNFQ
Sbjct: 199 YWWTDTIQ-PNVSLVFNESTALMYVTNLTSI-IYRLTTNVPTPVDRYYHRATVEDTGNFQ 256

Query: 256 QFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETVTCNCIPGYTPLNPSDVS 315
           Q+ Y K   S WT VW+A  +PC VN ICGVYG CTS DN+ VTC+C+PGY+ ++P+  S
Sbjct: 257 QYIYPKVNGSGWTSVWKAATEPCSVNGICGVYGYCTSPDNQNVTCSCLPGYSLMDPNVPS 316

Query: 316 EGCHPETVVNYCAETSSK--NFTVEVMDDAGFLFDNFADLARVSNVDVEGCRKAVMDDCY 373
           +GC+P      C+++ S   N+ +EV+D+A  + + F ++ R+ N D+E CR+AVMDDCY
Sbjct: 317 KGCYPNVPPQQCSKSPSDVTNYNIEVIDNADIVNNLFTEMTRLYNSDLEKCREAVMDDCY 376

Query: 374 SLGASLVG-STCVKTRMPLLNARKSA-STKGMKAIIKVPTKMSNPSNHEGKKKNNFNSRL 431
            + A+L   + C K R+P +NAR+S+ ST G++ IIKVP      ++     K    S++
Sbjct: 377 CMAATLTADNVCRKKRIPFMNARQSSPSTNGIQTIIKVPVVEQGKTDGLIAGKKEPRSQM 436

Query: 432 LLKIGFIFSAICALLSGVAAIYYSPAARGLIKRRNYFDPNSMEINFREFTFQELQEATKG 491
           +LK+    S + ALL    AIY +P AR  + R   F  N  EIN ++FT++EL EAT G
Sbjct: 437 ILKVCLSISTMLALLFAAFAIY-NPIAR--LSRARKFLANPAEINLKKFTYRELHEATDG 493

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F   +G GS G VY GIL L+D QI+IAVKKLE+ +E+ ++EF+TEL++IG+THHKNLV+
Sbjct: 494 FKNKIGRGSFGTVYSGILNLEDKQIKIAVKKLERVMEQGDKEFLTELRVIGQTHHKNLVK 553

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           LLGFC E+  RLLVYELM NGTLS FLF EG++P W  R +I L +ARGL YLH+ECETQ
Sbjct: 554 LLGFCDEQSHRLLVYELMTNGTLSGFLFSEGEKPCWDHRAQIVLAIARGLSYLHDECETQ 613

Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           IIHCDIKPQNVLLD     + +  KI++FG++KLL KDQTRT TN+RGTMGY+APEWL+N
Sbjct: 614 IIHCDIKPQNVLLD-----SQFNPKIAEFGLAKLLMKDQTRTSTNVRGTMGYMAPEWLKN 668

Query: 672 VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVS 731
           VPVT KVDV+SFGV+LLEIIC R+HIEL+RVEEESEE D++L DWV++C+    L+ +V 
Sbjct: 669 VPVTAKVDVYSFGVLLLEIICCRKHIELNRVEEESEEDDLILVDWVLTCVRKGKLEAVVK 728

Query: 732 HDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMPPLLH 784
           HDPEV  D +RFERMAMVGLWC HPDP LRP+MKKVI MLEGT+EV +PPL+H
Sbjct: 729 HDPEVSDDFKRFERMAMVGLWCVHPDPVLRPTMKKVIQMLEGTVEVAVPPLVH 781

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432630|ref|XP_002278071.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Vitis vinifera]

 Score =  884 bits (2284), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/774 (57%), Positives = 569/774 (73%), Gaps = 21/774 (2%)

Query: 20  LHGQTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAA 79
           L G  + NISLGSS    +N+SWLSPSG+FAFGFY L GGL+L+GIWFDKIPEKT+VW+A
Sbjct: 17  LLGSHAENISLGSSFDTNTNSSWLSPSGEFAFGFYPLAGGLFLVGIWFDKIPEKTVVWSA 76

Query: 80  DRDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSG---AASLALMQNDGNFVLKNANSAV 136
           +RD PA AGS I  T  G L++T  NG+V QIY+G   AA+ A +QN+GN VL ++ S V
Sbjct: 77  NRDDPAPAGSSINFTVAGSLVMTVPNGTVTQIYNGDTNAANSASLQNNGNLVLWSSVSRV 136

Query: 137 VWDSFDFPTDTILPGQVLLTGK-KLYSNSRGTADYSTGNYTLEMQA-DGNLVLSAYHFAD 194
           +W SF+ PTDT+LPGQ +  G  +L+SN+ GT DYS GN+ LE+Q+ DGN+ L A+ F+D
Sbjct: 137 LWQSFEHPTDTLLPGQTIPAGDTRLFSNTNGTVDYSKGNFQLEVQSVDGNMGLFAFRFSD 196

Query: 195 PGYWYTGTVTLNNVSLIFNQS-AFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGN 253
            GYW++ T    NVSL+FN++ A MY+ N T   IFR+TR+V TP   YYHRATI+  GN
Sbjct: 197 SGYWWSNTTQQTNVSLVFNETTASMYMTNLTSI-IFRMTRDVPTPVNIYYHRATIEDTGN 255

Query: 254 FQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETVTCNCIPGYTPLNPSD 313
           FQQ+ Y+K   + W  +WRA+ +PC VN ICGVYG CTS  N+  TC+C+PGY+ ++P+ 
Sbjct: 256 FQQYVYNKVNGTGWRSIWRAIEEPCTVNGICGVYGYCTSPRNQNATCSCLPGYSLIDPNI 315

Query: 314 VSEGCHPETVVNYCAETSSK-NFTVEVMDDAGFLFDNFADLARVSNVDVEGCRKAVMDDC 372
            S+GC P+  V  CA T S+  + VEV+DDA    D FA+L R+   D++GC KAV DDC
Sbjct: 316 PSKGCRPDVPVEQCANTPSETEYRVEVIDDADIKNDIFAELTRLYGYDLDGCIKAVQDDC 375

Query: 373 YSLGASLV-GSTCVKTRMPLLNARKSA-STKGMKAIIKVPTKMSNPSNHEGKKKNNFNSR 430
           Y + A+    + C K R+P +NARKS+ ST G++AIIKVP K        GKK+    S+
Sbjct: 376 YCVAATYTTDNVCRKKRIPFMNARKSSPSTDGIQAIIKVPVKTD--VQIAGKKEPR--SQ 431

Query: 431 LLLKIGFIFSAICALLSGVAAIYYSPAARGLIKRRNYFDPNSMEINFREFTFQELQEATK 490
           ++LK+    SAI A L   AAIY  P AR    R+   +P   EIN  +FT++EL EAT 
Sbjct: 432 MILKVCLSISAILAFLFAAAAIYNHPIARRSRARKVLANP--AEINLNKFTYRELHEATD 489

Query: 491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLV 550
           GF   +G GS G VY GIL L+D QI+IAVKKLE+ +E+ ++EF+TE+++IG+THHKNLV
Sbjct: 490 GFKNKIGRGSFGTVYSGILNLEDKQIKIAVKKLERVMEQGDKEFLTEVRVIGQTHHKNLV 549

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           +LLGFC E+  RLLVYELM NGTLS FLF EG++P W  R +I L +ARGL YLH+ECET
Sbjct: 550 KLLGFCDEQSHRLLVYELMTNGTLSGFLFAEGEKPCWDHRAQIVLAIARGLSYLHDECET 609

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
           QIIHCDIKPQNVLLD     + + AKI+DFG++KLL KDQTRT TN+RGTMGY+APEWL+
Sbjct: 610 QIIHCDIKPQNVLLD-----SQFNAKIADFGLAKLLMKDQTRTSTNVRGTMGYMAPEWLK 664

Query: 671 NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLV 730
           N PVT KVDV+SFGV+LLEIIC RRHIEL+RVEEESEE D++L DWV++C+    L+ +V
Sbjct: 665 NAPVTAKVDVYSFGVLLLEIICCRRHIELNRVEEESEEDDLILMDWVLTCVRKGKLEAVV 724

Query: 731 SHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMPPLLH 784
            HDPEV  D +RFERMAMVGLWC HPDP LRP+MKKVI MLEGT+EV +PPL+H
Sbjct: 725 KHDPEVSDDFKRFERMAMVGLWCVHPDPVLRPTMKKVIQMLEGTVEVAVPPLVH 778

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432634|ref|XP_002278198.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Vitis vinifera]

 Score =  874 bits (2258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/773 (56%), Positives = 558/773 (72%), Gaps = 17/773 (2%)

Query: 21  HGQTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAAD 80
           H QT  NISLGS +T  ++++WLSPSGDFAFGFY L  GL+LLGIWF+KIPE+TLVW+A+
Sbjct: 23  HAQTPENISLGSGLTTTTDSTWLSPSGDFAFGFYPLDSGLFLLGIWFNKIPEETLVWSAN 82

Query: 81  RDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYS-GAASLALMQNDGNFVLKNANSAVVWD 139
           RD+PA  GS I LT  G LLLTY NGS+  IY   AAS A M ++GNFVL ++ S V+W 
Sbjct: 83  RDNPAPEGSTINLTASGYLLLTYPNGSLDHIYEDAAASSASMLDNGNFVLWSSVSRVLWQ 142

Query: 140 SFDFPTDTILPGQVLLTGK-KLYSNSRGTADYSTGNYTLEMQA-DGNLVLSAYHFADPGY 197
           SF+ PTDT+LPGQ +  G  +L+SN+ GT DYS GN+ LE+Q+ DGN+ L A+ F+D GY
Sbjct: 143 SFEHPTDTLLPGQTIPAGDTRLFSNTNGTVDYSKGNFQLEVQSVDGNMGLFAFRFSDSGY 202

Query: 198 WYTGTVTLNNVSLIFNQS-AFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQQ 256
           W++ T    NVSL+FN++ A MY+ N T   IFR+TR+V TP   YYHRATI+  GNFQQ
Sbjct: 203 WWSNTTQQTNVSLVFNETTASMYMTNLTSI-IFRMTRDVPTPVNIYYHRATIEDTGNFQQ 261

Query: 257 FAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETVTCNCIPGYTPLNPSDVSE 316
           + Y+K   + W  +WRA+ +PC VN ICGVYG CTS  N+  TC+C+PGY+ ++P+  S+
Sbjct: 262 YVYNKVNGTGWRSIWRAIEEPCTVNGICGVYGYCTSPRNQNATCSCLPGYSLIDPNIPSK 321

Query: 317 GCHPETVVNYCAETSSKN-FTVEVMDDAGFLFDNFADLARVSNVDVEGCRKAVMDDCYSL 375
           GC P+  V  CA T S+  + VEV+DDA    D FA+L R+   D++GC KAV DDCY +
Sbjct: 322 GCRPDVPVEQCANTPSETEYRVEVIDDADIKNDIFAELTRLYGYDLDGCIKAVQDDCYCV 381

Query: 376 GASLV-GSTCVKTRMPLLNARKS-ASTKGMKAIIKVPTKMSNPSNHEGKKKNNFNSRLLL 433
            A+    + C K R+P +NARKS  ST G+KAIIKVP K+ +P     K  NN   ++++
Sbjct: 382 AATYTTDNVCRKKRIPFMNARKSIPSTTGIKAIIKVPVKIEDPI----KGTNNSRPQVVV 437

Query: 434 KIGFIFSAICALLSGVAAIYYSPAARGLIKRRNYFDPNSMEINFREFTFQELQEATKGFS 493
            +     +  ALL     IY +         +      S +IN R FT+QEL +AT GF 
Sbjct: 438 LVCLSVVSFLALLFATIIIYQNLVVPRFGLSKLAPSTQSADINLRTFTYQELHKATDGFR 497

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
             +G G+SG VY G LR +D ++EIAVKKLE+ IE+ + EF+ E++ IG+THH+NLVRLL
Sbjct: 498 NRLGRGASGSVYSGTLRFEDKEMEIAVKKLERVIEQGDREFLAEVRAIGQTHHRNLVRLL 557

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
           GFC+E+  RLLVYELM NG LS+FLF +G++P W  R EI L +ARGLLYLHEECET+II
Sbjct: 558 GFCNEQSHRLLVYELMKNGPLSSFLFSKGEKPCWDHRAEIVLAIARGLLYLHEECETRII 617

Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP 673
           HCDIKPQNVLLD      +Y AKI+DFG++KLL KDQTRT TN RGTMGY+APEWL+  P
Sbjct: 618 HCDIKPQNVLLD-----QHYNAKIADFGLAKLLRKDQTRTSTNARGTMGYMAPEWLKCAP 672

Query: 674 VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHD 733
           VT KVDV SFGVMLLEIIC RRHIEL R+EEE+E+ D++L+DWV++C+    L+V+V HD
Sbjct: 673 VTAKVDVHSFGVMLLEIICCRRHIELDRIEEETEDDDLILTDWVLNCLRLGKLEVVVKHD 732

Query: 734 PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMPPLLHDQ 786
           PEVL D +RFERMAMVGLWC +PDP LRP+MK+VI MLEGT+E G+PPL+  Q
Sbjct: 733 PEVLGDFKRFERMAMVGLWCVNPDPILRPTMKRVIQMLEGTIEAGVPPLVTAQ 785

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432640|ref|XP_002278282.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Vitis vinifera]

 Score =  845 bits (2182), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/797 (52%), Positives = 556/797 (69%), Gaps = 38/797 (4%)

Query: 1   MALKRIVPCVLTLILKFYGLHGQTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGL 60
           M    ++ C L   L  +    QT+ N +LGS ITAG+++SW SPSG FAFGFY L  G 
Sbjct: 1   MVAAGVLVCSLVFALSLFVCSAQTTSNKNLGSGITAGTDSSWKSPSGHFAFGFYRLDSGC 60

Query: 61  YLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSGA-ASLA 119
           +L+GIWFDKI E TLVW+A+RD PA  GS + LT  G+L+LT+ NG+   IY+G  AS A
Sbjct: 61  FLVGIWFDKIQENTLVWSANRDDPARIGSTVNLTLSGQLVLTHSNGTKLLIYNGTLASSA 120

Query: 120 LMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEM 179
            M++DGNFVL++++S +VW SF FPTDT+LPGQVL+ G+KLYSN  GT DYSTG + LE+
Sbjct: 121 SMEDDGNFVLRDSSSKIVWQSFAFPTDTVLPGQVLVMGQKLYSNINGTVDYSTGRFMLEL 180

Query: 180 QADGNLVLSAYHFADPGYWYTGTVTLNNVSLIFNQS-AFMYLINSTGDNI-FRLTRNVMT 237
           Q DGN+V+S++ FADPGYW+T T    N+SL+FN S AFMY++N+T       + R V T
Sbjct: 181 QMDGNVVISSFQFADPGYWFTLTEGDKNISLVFNASTAFMYVMNTTSIRYRMGMEREVPT 240

Query: 238 PTEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNET 297
           P  DYYHRA I+ +GN QQ  Y K +  RW  VW AV +PCIV  ICGVYG CTS DN+T
Sbjct: 241 PITDYYHRAVINDYGNLQQMVYKKGSVGRWKVVWEAVTEPCIVYNICGVYGFCTSPDNKT 300

Query: 298 VTCNCIPGYTPLNPSDVSEGCHPETVVNYCAETS-SKNFTVEVMDDAGFLFDNFADLARV 356
           VTC C+ GY+P +P+  S+GC+P  +V++CA  S + +  +E MD+  F    F D+A+ 
Sbjct: 301 VTCTCLRGYSPWDPNVPSKGCYPNEMVDFCAPNSLASDLILEEMDNTDFPNGAFGDMAKS 360

Query: 357 SNVDVEGCRKAVMDDCYSLGASLVGSTCVKTRMPLLNARKSASTKGMKAIIKVPTKMSNP 416
           +  D+  CRKAVMDDC  +    V S C K R+                ++    ++   
Sbjct: 361 APSDLVSCRKAVMDDCSCMAGVWVESVCYKKRI----------------VVTSRVRLGIY 404

Query: 417 SNHEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAIYYSPAARGLIKRRNYFDPNSM--- 473
            ++E +      SR +L  G +  +I A+L   +AIY+ P A+  I++     P ++   
Sbjct: 405 DHNESRAP----SRAVLLAGLLSCSILAVLFAASAIYHHPLAQPYIRKH---PPPTLKVP 457

Query: 474 -EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNE 532
            EIN + F+FQEL+E T GF   +G G+ G VY G+L ++D ++EIAVK+L+K I++  E
Sbjct: 458 VEINLKAFSFQELREGTNGFKNKLGGGAFGTVYGGVLTIEDEEVEIAVKQLDKVIDQQGE 517

Query: 533 -EFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV 591
            EFM E+++IG THHKNLVRLLGFC++ + RLLVYELM NG LS+FLF EG++P W QR 
Sbjct: 518 KEFMNEVRVIGLTHHKNLVRLLGFCNQHNHRLLVYELMKNGALSSFLFDEGKKPSWDQRA 577

Query: 592 EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT 651
           +I LG++RGLLYLHEECETQIIHCDIKPQNVL     LD+NY AKI+DFG++KLL KDQT
Sbjct: 578 QIVLGISRGLLYLHEECETQIIHCDIKPQNVL-----LDSNYTAKIADFGLAKLLKKDQT 632

Query: 652 RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVE-EESEEVD 710
           RT TN+RGTMGY+APEWL+N PVTTKVDV+S+GVMLLEII  R+H+EL R+E EE+   D
Sbjct: 633 RTSTNVRGTMGYMAPEWLKNAPVTTKVDVYSYGVMLLEIIFCRKHLELHRIEDEETGGDD 692

Query: 711 IVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM 770
           ++L DWV+ C+    L+ +VSHD E+L D +RFERMAMVGLWC  P+P LRPSMK V+ M
Sbjct: 693 MILVDWVLCCVRDGKLEAVVSHDTELLCDYKRFERMAMVGLWCVCPNPTLRPSMKMVMQM 752

Query: 771 LEGTLEVGMPPLLHDQM 787
           LEG+++VG+PPL+   M
Sbjct: 753 LEGSIDVGIPPLIETLM 769

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477337|ref|XP_002278047.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Vitis vinifera]

 Score =  843 bits (2179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/775 (54%), Positives = 547/775 (70%), Gaps = 57/775 (7%)

Query: 19  GLHGQTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWA 78
           G H Q   NISLGSS    +N+SWLSPSGDFAFGFY L GGL+LLGIWFDKI EKT+VW+
Sbjct: 19  GSHAQLQGNISLGSSFDTETNSSWLSPSGDFAFGFYPLPGGLFLLGIWFDKITEKTVVWS 78

Query: 79  ADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSGAASLALMQNDGNFVLKNANSAVVW 138
           A+RD PA AGS + LT  G L+LT+ NG+V QI+ GA + A   N  +F     N+ ++W
Sbjct: 79  ANRDDPAPAGSSVNLTLTGSLVLTFPNGTVIQIHDGATNPA---NSASF----QNNGLLW 131

Query: 139 DSFDFPTDTILPG--QVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPG 196
              + PT  ++ G  Q + + ++LYSN+ GT DYSTG + LE+  DGN+VL+ + +AD G
Sbjct: 132 YLPNIPTAKLMSGLVQTVPSDRRLYSNANGTVDYSTGKFMLEVGTDGNVVLATFRWADSG 191

Query: 197 YWYTGTVTLNNVSLIFNQS-AFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQ 255
           YW+T T+   NVSL+FN+S A MY+ N T   I+RLT NV TP + YYHRAT++  GNFQ
Sbjct: 192 YWWTNTIQ-PNVSLVFNESTALMYVTNLTSI-IYRLTTNVSTPVDRYYHRATVEDTGNFQ 249

Query: 256 QFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETVTCNCIPGYTPLNPSDVS 315
           Q+ Y K   S WT VW+AV  PC VN ICGVYG CTS+DN+ VTC+C+PGY+ ++P+  S
Sbjct: 250 QYIYPKVNGSGWTSVWKAVTQPCSVNGICGVYGYCTSADNQNVTCSCLPGYSLMDPNVPS 309

Query: 316 EGCHPETVVNYCAETSSK--NFTVEVMDDAGFLFDNFADLARVSNVDVEGCRKAVMDDCY 373
           +GC+P      C+++ S   N+T+EV+ DA  + + FA++ R+ N D+E CR++ MDDCY
Sbjct: 310 KGCYPNVPPQQCSKSPSNVTNYTIEVIGDADIVNNEFAEMTRLYNYDLEKCRQSCMDDCY 369

Query: 374 SLGASLVG-STCVKTRMPLLNARKSA-STKGMKAIIKVPTKMSNPSNH--EGKKKNNFNS 429
            + A+L   + C K R+P +NAR+S+ ST G++ IIKVP      ++   EGKK     S
Sbjct: 370 CMAATLTADNVCRKKRIPFMNARQSSPSTNGIQTIIKVPVVEPGKTDGQIEGKKSEARRS 429

Query: 430 RLLLKIGFIFSAICALLSGVAAIYYSPAARGLIKRRNYFDPNSMEINFREFTFQELQEAT 489
           R                           AR ++        N  EIN ++FT++EL EAT
Sbjct: 430 R---------------------------ARKVLA-------NPAEINLKKFTYRELHEAT 455

Query: 490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNL 549
            GF   +G+GS G VY G+L  +D +IEIAVKKL+K +E+ ++EF+TE+ +IG+THHKNL
Sbjct: 456 DGFKNKIGSGSFGTVYSGVLNFEDKEIEIAVKKLKKVMEQGDKEFLTEVMVIGQTHHKNL 515

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V+LLGFC E+  RLLVYELM NGTLS FLF EG++P W  R +I L VARGL YLH+ECE
Sbjct: 516 VKLLGFCDEQSHRLLVYELMTNGTLSGFLFAEGEKPCWDHRAQIVLAVARGLSYLHDECE 575

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
           TQIIHCDIKPQNVLLD     + +  KI+DFG++KLL KDQTRT TN+RGTMGY+APEWL
Sbjct: 576 TQIIHCDIKPQNVLLD-----SQFNPKIADFGLAKLLMKDQTRTSTNVRGTMGYMAPEWL 630

Query: 670 RNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL 729
           +NVPVT KVDV+SFGV+LLEIIC RRHIEL+RVEEESEE D++L DWV++C++   L+ +
Sbjct: 631 KNVPVTAKVDVYSFGVLLLEIICCRRHIELNRVEEESEEDDLILVDWVLTCVIRGKLEAV 690

Query: 730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMPPLLH 784
           V HDPEV  D +RFERMAMVGLWC HPDP LRP+MKKVI MLEGT+EV +PPL H
Sbjct: 691 VKHDPEVSDDFKRFERMAMVGLWCVHPDPILRPTMKKVIQMLEGTVEVAVPPLAH 745

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147827611|emb|CAN77457.1| hypothetical protein VITISV_037412 [Vitis vinifera]

 Score =  825 bits (2131), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/783 (53%), Positives = 544/783 (69%), Gaps = 43/783 (5%)

Query: 13  LILKFYGLHGQTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPE 72
           LI        QT+ N +LGS ITAG+++SW SPSG FAFGFY L  G +L+GIWFDKI E
Sbjct: 52  LICNRLDYQTQTTSNKNLGSGITAGTDSSWKSPSGHFAFGFYRLDSGCFLVGIWFDKIQE 111

Query: 73  KTLVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSGA-ASLALMQNDGNFVLKN 131
           KTLVW+A+RD PA  GS + LT  G+L+LT+ NG+   IY+G  A  A M+++GNFVL+N
Sbjct: 112 KTLVWSANRDDPARIGSTVNLTLSGQLVLTHSNGTKLLIYNGTLARSASMEDNGNFVLRN 171

Query: 132 ANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQ-ADGNLVLSAY 190
           ++S ++W SFDFPTDTILPGQVL+ G+KLYSN+ GT DYSTG + LE+Q  DGN+VLS++
Sbjct: 172 SSSKIIWQSFDFPTDTILPGQVLVMGQKLYSNTNGTVDYSTGRFMLEVQIMDGNVVLSSF 231

Query: 191 HFADPGYWYTGTVTLNNVSLIFNQS-AFMYLINSTGDNIFRLTRNVMTPTEDYYHRATID 249
            FADPGYWYT T    N+SL+FN S A MY++N+T          + T   DYYHRA I+
Sbjct: 232 RFADPGYWYTSTAGDKNISLVFNNSNALMYVMNTTSIRYNMSREELPTSITDYYHRAVIN 291

Query: 250 GHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETVTCNCIPGYTPL 309
            +GN QQ  Y K +  +W  VW A+ +PC VN ICGV+G CTS DN  VTC C+PGY+P 
Sbjct: 292 DYGNLQQMVYKKGSVGQWKVVWEAITEPCTVNNICGVFGFCTSPDNNIVTCTCLPGYSPW 351

Query: 310 NPSDVSEGCHPETVVNYCAETSS-KNFTVEVMDDAGFLFDNFADLARVSNVDVEGCRKAV 368
           +P+  S+GC+P  +V++CA  SS  +FT+E MD+  F    +A+                
Sbjct: 352 DPNVPSKGCYPNEMVDFCAPNSSASDFTLEEMDNTDFPNGEYAE---------------- 395

Query: 369 MDDCYSLGASLVGSTCVKTRMPLLNARKSASTKGMKAIIKVPTKMSNPSNHEGKKKNNFN 428
                        S C K RMPLLNAR S+ST    A IKVP K++N    + + K    
Sbjct: 396 -------------SVCYKKRMPLLNARSSSSTNNRIAFIKVP-KVNNSWGIDDRPKRRTP 441

Query: 429 SRLLLKIGFIFSAICALLSGVAAIYYSPAARGLIKRRNYFDPN-SMEINFREFTFQELQE 487
           SR +L  G +  +I A+L   +AIY+ P A+  I++     P   +EIN + F+FQEL+ 
Sbjct: 442 SRGVLLAGLLSCSILAVLFAASAIYHHPLAQPYIRKHPPPTPKVPVEINLKAFSFQELRG 501

Query: 488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNE-EFMTELKIIGRTHH 546
            T GF   +G G+ G VY G++ ++D ++EIAVK+L+K I++  E EFM E+++IG THH
Sbjct: 502 GTNGFKNKLGGGAFGTVYGGVITIEDEEVEIAVKQLDKVIDQQGEKEFMNEVRVIGLTHH 561

Query: 547 KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE 606
           KNLVRLLGFC++ + RLLVYELM NG LS+FLF EG++P W QR +I LG+ARGLLYLHE
Sbjct: 562 KNLVRLLGFCNQHNHRLLVYELMNNGALSSFLFDEGKKPSWDQRAQIVLGIARGLLYLHE 621

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
           ECETQIIHCDIKPQNVL     LD+NY AKI+DFG++KLL KDQTRT+TN+RGTMGY+AP
Sbjct: 622 ECETQIIHCDIKPQNVL-----LDSNYTAKIADFGLAKLLKKDQTRTNTNVRGTMGYMAP 676

Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVE-EESEEVDIVLSDWVISCMLSRN 725
           EWL+N PVTTKVDV+SFGVM+LEII  RRH+EL R+E EE+   D++L DWV+ C+    
Sbjct: 677 EWLKNAPVTTKVDVYSFGVMMLEIIFCRRHLELHRIEDEETGGDDMILIDWVLCCVRDGK 736

Query: 726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE-VGMPPLLH 784
           L+ +VSHD E+L   + FERMAMVGLWC  P+P LRPSM  V+ MLEG++E VG+PP + 
Sbjct: 737 LEAVVSHDTELLCHYKMFERMAMVGLWCVCPNPTLRPSMNMVMKMLEGSIEVVGIPPPIE 796

Query: 785 DQM 787
            QM
Sbjct: 797 TQM 799

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	788
TAIR|locus:2059103	828	AT2G19130 [Arabidopsis thalian	0.925	0.880	0.307	2.5e-81
TAIR|locus:2026155	829	AT1G34300 [Arabidopsis thalian	0.923	0.878	0.320	4.3e-77
TAIR|locus:2116525	821	SD2-5 "S-domain-2 5" [Arabidop	0.845	0.811	0.304	6.7e-72
TAIR|locus:2182603	872	AT5G35370 [Arabidopsis thalian	0.864	0.780	0.295	6.7e-72
TAIR|locus:2137010	849	AT4G11900 [Arabidopsis thalian	0.855	0.793	0.265	6.8e-65
TAIR|locus:2197744	807	AT1G61420 [Arabidopsis thalian	0.861	0.841	0.281	4.2e-63
TAIR|locus:2197709	809	AT1G61480 [Arabidopsis thalian	0.862	0.840	0.286	7.9e-62
TAIR|locus:2018546	843	RK1 "receptor kinase 1" [Arabi	0.388	0.362	0.347	9.9e-60
TAIR|locus:2018506	847	RK2 "receptor kinase 2" [Arabi	0.389	0.362	0.349	1.3e-59
TAIR|locus:2131684	783	AT4G27290 [Arabidopsis thalian	0.371	0.374	0.371	1.7e-59

TAIR|locus:2059103 AT2G19130 [Arabidopsis thaliana (taxid:3702)]

 Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
 Identities = 244/793 (30%), Positives = 368/793 (46%)

Query:    20 LHGQTSPNISLGSSITAGSNTSWLSPSGDXXXXXXXXXXXXXXXXIWFDKIPEKTLVWAA 79
             +HG ++ +   G    +G  T   S                    +W+ ++ + T++W A
Sbjct:    17 IHGSSAVDTISGDFTLSGDQTIVSSDGTYEMGFFKPGSSSNFYIGMWYKQLSQ-TILWVA 75

Query:    80 DRDSP-AEAGSKITLTNDGKLLL---TY----FNGSVQQIYSGAASLALMQNDGNFVLKN 131
             +RD   ++  S +   ++G L+L    Y    ++  +    S +A  A++Q+DGN VL+ 
Sbjct:    76 NRDKAVSDKNSSVFKISNGNLILLDGNYQTPVWSTGLNSTSSVSALEAVLQDDGNLVLRT 135

Query:   132 ANSA----VVWDSFDFPTDTILPG-QVLL---TGKKLYSNS-RGTADYSTGNYTLEMQAD 182
               S+    V+W SFD P DT LPG ++ L   TGK     S +   D S G ++LE+  D
Sbjct:   136 GGSSLSANVLWQSFDHPGDTWLPGVKIRLDKRTGKSQRLTSWKSLEDPSPGLFSLEL--D 193

Query:   183 GNLVLSAYHFADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDY 242
              +            YW +G    N  S IF+    M L      + F  T +       Y
Sbjct:   194 ESTAYKILWNGSNEYWSSGP--WNPQSRIFDSVPEMRLNYIYNFSFFSNTTDSYFTYSIY 251

Query:   243 YH----RATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETV 298
                   R  +D  G  +QF + +   + W   W      C V   CG +G+C  SD    
Sbjct:   252 NQLNVSRFVMDVSGQIKQFTWLEGNKA-WNLFWSQPRQQCQVYRYCGSFGIC--SDKSEP 308

Query:   299 TCNCIPGYTPLNPSDVSEGCHPETVVNYCAETSSKNFTVEVMDDAGF-LFDNFADLARVS 357
              C C  G+ P++  D     +    V       S+    +        L DN   L R S
Sbjct:   309 FCRCPQGFRPMSQKDWDLKDYSAGCVRKTELQCSRGDINQFFRLPNMKLADNSEVLTRTS 368

Query:   358 NVDVEGCRKAVMDDCYSLGASL-VGST-CVKTRMPLLNARKSASTKGMKAIIKVPTKMSN 415
                +  C  A   DC     +   GS+ C+     +LN ++         I  +    S+
Sbjct:   369 ---LSICASACQGDCSCKAYAYDEGSSKCLVWSKDVLNLQQLEDENSEGNIFYLRLAASD 425

Query:   416 PSNHEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAIYYSPAARGLIKRRNYFDPNSMEI 475
               N     K+N N       G IF A+   L  +  +          +RR        + 
Sbjct:   426 VPNVGASGKSN-NK------GLIFGAVLGSLGVIVLVLLVVILILRYRRRKRMRGEKGDG 478

Query:   476 NFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFM 535
                 F+++ELQ ATK FS  +G G  G V++G L   D+  +IAVK+LE  I +  ++F 
Sbjct:   479 TLSAFSYRELQNATKNFSDKLGGGGFGSVFKGAL--PDSS-DIAVKRLE-GISQGEKQFR 534

Query:   536 TELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF-HEGQRP---GWVQRV 591
             TE+  IG   H NLVRL GFCSE  K+LLVY+ MPNG+L + LF ++ +     GW  R 
Sbjct:   535 TEVVTIGTIQHVNLVRLRGFCSEGSKKLLVYDYMPNGSLDSHLFLNQVEEKIVLGWKLRF 594

Query:   592 EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT 651
             +IALG ARGL YLH+EC   IIHCDIKP+N+LLD     + +  K++DFG++KL+ +D +
Sbjct:   595 QIALGTARGLAYLHDECRDCIIHCDIKPENILLD-----SQFCPKVADFGLAKLVGRDFS 649

Query:   652 RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXX 711
             R  T MRGT GY+APEW+  V +T K DV+S+G+ML E++ GRR+               
Sbjct:   650 RVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFELVSGRRNTEQSENEKVRFFPS- 708

Query:   712 XXXXWVISCMLSRNLQVLVSHDPEVLSD---LERFERMAMVGLWCNHPDPNLRPSMKKVI 768
                 W  + +L+++  +    DP +  D   +E   R   V  WC   + + RP+M +V+
Sbjct:   709 ----WAAT-ILTKDGDIRSLVDPRLEGDAVDIEEVTRACKVACWCIQDEESHRPAMSQVV 763

Query:   769 HMLEGTLEVGMPP 781
              +LEG LEV  PP
Sbjct:   764 QILEGVLEVNPPP 776

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2026155 AT1G34300 [Arabidopsis thaliana (taxid:3702)]

 Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
 Identities = 262/817 (32%), Positives = 384/817 (47%)

Query:     1 MALKRIVPCVLTLILKFYGLHGQTS-PNISLGSSITA-GSNTSWLSPSGDXXXXXXXXXX 58
             MA+K     +L L+L    LH   S   I LGS I A GSN +W SP+            
Sbjct:     1 MAVKTPFLKLLPLLLLL--LHFPFSFSTIPLGSVIYASGSNQNWPSPNSTFSVSFVPSPS 58

Query:    59 -XXXXXXIWF-DKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSGAA 116
                    + F   +P    +W+A      ++   + L   G L LT  NGS   ++    
Sbjct:    59 PNSFLAAVSFAGSVP----IWSA---GTVDSRGSLRLHTSGSLRLT--NGSGTTVWDSKT 109

Query:   117 S-LAL----MQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYS 171
               L +    +++ G F+L N  S  VW SFD PTDTI+  Q    GK L S         
Sbjct:   110 DRLGVTSGSIEDTGEFILLNNRSVPVWSSFDNPTDTIVQSQNFTAGKILRS--------- 160

Query:   172 TGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGD-NIFR 230
              G Y+ +++  GNL L     A   YW  G   LN+ S   N S+    + + G  +IF 
Sbjct:   161 -GLYSFQLERSGNLTLRWNTSAI--YWNHG---LNS-SFSSNLSSPRLSLQTNGVVSIFE 213

Query:   231 ---LTRNVMTPTEDYYHRAT-----IDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNC 282
                L    +  + DY    T     +D  GN + ++     S      W AV D C+V  
Sbjct:   214 SNLLGGAEIVYSGDYGDSNTFRFLKLDDDGNLRIYSSASRNSGPVNAHWSAV-DQCLVYG 272

Query:   283 ICGVYGMCTSSDNETVTCNCIP-GYTPLNPSDVSEGCHPETVVNYCAETSSKNFTVEVMD 341
              CG +G+C+ +D   + C+C    +  ++ +D  +GC  +  ++ C   S     ++++ 
Sbjct:   273 YCGNFGICSYNDTNPI-CSCPSRNFDFVDVNDRRKGCKRKVELSDC---SGNTTMLDLVH 328

Query:   342 DAGFLFD---NFADLARVSNVDVEGCRKAVMDDCYSLGASLVGS-TCVKTRMPLLNARKS 397
                F ++   N       S+     C  +V+  C +  +   GS  C +           
Sbjct:   329 TRLFTYEDDPNSESFFAGSSPCRANCLSSVL--CLASVSMSDGSGNCWQKHPGSFFTGYQ 386

Query:   398 ASTKGMKAIIKV--PTKMSNPSNHEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAIYYS 455
               +    + +KV  P  ++N      K  +N NS++ L I  +  A+ A L G+ A+   
Sbjct:   387 WPSVPSTSYVKVCGPV-VANTLERATKGDDN-NSKVHLWI--VAVAVIAGLLGLVAVEIG 442

Query:   456 PAARGLIKRRN-YFDPNSMEINFRE--------FTFQELQEATKGFSKLVGTGSSGKVYR 506
                     R+N  F   S      E        FT++ELQ  TK F + +G G  G VYR
Sbjct:   443 --LWWCCCRKNPRFGTLSSHYTLLEYASGAPVQFTYKELQRCTKSFKEKLGAGGFGTVYR 500

Query:   507 GILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY 566
             G+L  +     +AVK+LE  IE+  ++F  E+  I  THH NLVRL+GFCS+   RLLVY
Sbjct:   501 GVLTNRTV---VAVKQLE-GIEQGEKQFRMEVATISSTHHLNLVRLIGFCSQGRHRLLVY 556

Query:   567 ELMPNGTLSNFLFHEGQRP--GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLL 624
             E M NG+L NFLF         W  R  IALG A+G+ YLHEEC   I+HCDIKP+N+L+
Sbjct:   557 EFMRNGSLDNFLFTTDSAKFLTWEYRFNIALGTAKGITYLHEECRDCIVHCDIKPENILV 616

Query:   625 DLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSF 683
             D    D N+ AK+SDFG++KLLN KD     +++RGT GY+APEWL N+P+T+K DV+S+
Sbjct:   617 D----D-NFAAKVSDFGLAKLLNPKDNRYNMSSVRGTRGYLAPEWLANLPITSKSDVYSY 671

Query:   684 GVMLLEIICGRRHXXXXXXXXXXXXXXXXXXXWVISCMLSRNLQVLVSHDPEVLSDLERF 743
             G++LLE++ G+R+                   +         L   +S D  V  D+E+ 
Sbjct:   672 GMVLLELVSGKRNFDVSEKTNHKKFSIWAYEEFEKG-NTKAILDTRLSEDQTV--DMEQV 728

Query:   744 ERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMP 780
              RM     WC    P  RP+M KV+ MLEG  E+  P
Sbjct:   729 MRMVKTSFWCIQEQPLQRPTMGKVVQMLEGITEIKNP 765

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

TAIR|locus:2116525 SD2-5 "S-domain-2 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 224/735 (30%), Positives = 349/735 (47%)

Query:    75 LVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQI-YSGA-ASLALMQNDGNFVLKNA 132
             L+W+A+R SP     K    ++G +++      V ++  SG  AS   +++ GN V+ + 
Sbjct:    81 LIWSANRASPVSNSDKFVFDDNGNVVME--GTEVWRLDNSGKNASRIELRDSGNLVVVSV 138

Query:   133 NSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHF 192
             +   +W+SFD PTDT++  Q    G KL S+       S   Y LE+++ G++VLS    
Sbjct:   139 DGTSIWESFDHPTDTLITNQAFKEGMKLTSSPSS----SNMTYALEIKS-GDMVLSVNSL 193

Query:   193 ADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFR--------LTRNVMTPTEDYYH 244
                 YW       N    I N+   +   +S   N +R        L + V +  +D   
Sbjct:   194 TPQVYWSMA----NARERIINKDGGVVTSSSLLGNSWRFFDQKQVLLWQFVFSDNKDDNT 249

Query:   245 R-ATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETVTCNCI 303
                 + G+     F+   S +S      +  +D C     CG Y +C+ S      C C+
Sbjct:   250 TWIAVLGNNGVISFSNLGSGASAADSSTKIPSDLCGTPEPCGPYYVCSGSK----VCGCV 305

Query:   304 PGYTPLNPSDVSEGCHPETVVNYCAETSSKNFTVEV-MDDAGFLFDNFADLARV----SN 358
              G +    SD   G     + + C +T   N T+ + +  AG   D FA L         
Sbjct:   306 SGLSRAR-SDCKTG-----ITSPCKKTKD-NATLPLQLVSAGDGVDYFA-LGYAPPFSKK 357

Query:   359 VDVEGCRKAVMDDCYSLGASLVGSTCVKTRMPLLNARKSAST--KGMKAIIKVPTKMSNP 416
              D++ C++   ++C  LG     S+        + + K++     G  + IK+ +  S  
Sbjct:   358 TDLDSCKEFCHNNCSCLGLFFQNSSGNCFLFDYIGSFKTSGNGGSGFVSYIKIASTGSGG 417

Query:   417 SNHEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAIYYS------PAARGLIKRRNYFDP 470
              ++      +F   +++ +  +F  I A+L  VA   +        A +   +  N+ + 
Sbjct:   418 GDNGEDDGKHFPYVVIIVVVTVF--IIAVLIFVAFRIHKRKKMILEAPQESSEEDNFLE- 474

Query:   471 NSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT 530
             N   +  R F +++LQ AT  FS  +G G  G VY G L   D    +AVKKLE  I + 
Sbjct:   475 NLSGMPIR-FAYKDLQSATNNFSVKLGQGGFGSVYEGTL--PDGS-RLAVKKLE-GIGQG 529

Query:   531 NEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP---GW 587
              +EF  E+ IIG  HH +LVRL GFC+E   RLL YE +  G+L  ++F +        W
Sbjct:   530 KKEFRAEVSIIGSIHHLHLVRLRGFCAEGAHRLLAYEFLSKGSLERWIFRKKDGDVLLDW 589

Query:   588 VQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
               R  IALG A+GL YLHE+C+ +I+HCDIKP+N+LLD      N+ AK+SDFG++KL+ 
Sbjct:   590 DTRFNIALGTAKGLAYLHEDCDARIVHCDIKPENILLD-----DNFNAKVSDFGLAKLMT 644

Query:   648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXX 707
             ++Q+   T MRGT GY+APEW+ N  ++ K DV+S+G++LLE+I GR++           
Sbjct:   645 REQSHVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLELIGGRKNYDPSETSEKCH 704

Query:   708 XXXXXXXXWVISCMLSRNLQVLVSHDPEVLSDL-ERFERMAMVGLWCNHPDPNLRPSMKK 766
                     +    M    L  +V    + +    ER +R     LWC   D   RPSM K
Sbjct:   705 FPS-----FAFKKMEEGKLMDIVDGKMKNVDVTDERVQRAMKTALWCIQEDMQTRPSMSK 759

Query:   767 VIHMLEGTLEVGMPP 781
             V+ MLEG   V  PP
Sbjct:   760 VVQMLEGVFPVVQPP 774

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

TAIR|locus:2182603 AT5G35370 [Arabidopsis thaliana (taxid:3702)]

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 222/751 (29%), Positives = 361/751 (48%)

Query:    76 VWAADRDSPAEAGSKITLT-------NDGKLLLTYFNGSVQQIYSGAASLALMQNDGNFV 128
             +W+++RDSP  +   + LT        DGK  +  ++  V  + S   SL L  + GN +
Sbjct:    86 IWSSNRDSPVSSSGTMNLTPQGISVIEDGKSQIPVWSTPV--LASPVKSLRLT-DAGNLL 142

Query:   129 LKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYT-LEMQADGNLVL 187
             L +  +  +W+SFDFPTD+I+ GQ L  G  L S S   +D+STG+Y  L  ++DG +  
Sbjct:   143 LLDHLNVSLWESFDFPTDSIVLGQRLKLGMFL-SGSVSRSDFSTGDYKFLVGESDGLMQW 201

Query:   188 SAYHFADPGYWYTGTVTLN-NVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRA 246
                ++          V  N  V  +   ++ + L+   G  +  + R  + P+ D+   A
Sbjct:   202 RGQNYWKLRMHIRANVDSNFPVEYLTVTTSGLALMARNGTVV--VVRVALPPSSDF-RVA 258

Query:   247 TIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSD-NETVTCNCIPG 305
              +D  G   +F   + +       +    D C +  +CG  G+C   + +E  +C+C P 
Sbjct:   259 KMDSSG---KFIVSRFSGKNLVTEFSGPMDSCQIPFVCGKLGLCNLDNASENQSCSC-PD 314

Query:   306 YTPLNPSDVSEG-CHPETV-VNYCAETSSKNFT-VEVMDDAGFLFDNFADLARVSNVDVE 362
                +   D  +G C P +  ++      ++N + +E+     +   +F D      + + 
Sbjct:   315 EMRM---DAGKGVCVPVSQSLSLPVSCEARNISYLELGLGVSYFSTHFTDPVE-HGLPLL 370

Query:   363 GCRKAVMDDCYSLGASLVGST--C--VKTRMPLLN-ARKSASTKGMKAIIKVPTKMSN-- 415
              C      +C  LG     ++  C  VK     L+  + S     +   +K+  + +N  
Sbjct:   371 ACHDICSKNCSCLGVFYENTSRSCYLVKDSFGSLSLVKNSPENHDLIGYVKLSIRKTNAQ 430

Query:   416 PSNHEGKKKNNFNSRLLLKI---GFIFSAICALL--SGVAAIYYSPAARGLIKRRNYF-- 468
             P  +  +  ++F    L+ +   GF       LL     A + YS      + R   F  
Sbjct:   431 PPGNNNRGGSSFPVIALVLLPCSGFFLLIALGLLWWRRCAVMRYSSIREKQVTRPGSFES 490

Query:   469 -DPNSMEINF--REFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK 525
              D  S  I    ++F F+EL++AT+ F   +G+G  G VY+G L   D  + IAVKK+  
Sbjct:   491 GDLGSFHIPGLPQKFEFEELEQATENFKMQIGSGGFGSVYKGTL--PDETL-IAVKKITN 547

Query:   526 DIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP 585
                   +EF TE+ IIG   H NLV+L GFC+   + LLVYE M +G+L   LF  G  P
Sbjct:   548 HGLHGRQEFCTEIAIIGNIRHTNLVKLRGFCARGRQLLLVYEYMNHGSLEKTLF-SGNGP 606

Query:   586 --GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS 643
                W +R +IALG ARGL YLH  C+ +IIHCD+KP+N+LL       ++  KISDFG+S
Sbjct:   607 VLEWQERFDIALGTARGLAYLHSGCDQKIIHCDVKPENILLH-----DHFQPKISDFGLS 661

Query:   644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXX 703
             KLLN++++   T MRGT GY+APEW+ N  ++ K DV+S+G++LLE++ GR++       
Sbjct:   662 KLLNQEESSLFTTMRGTRGYLAPEWITNAAISEKADVYSYGMVLLELVSGRKNCSFRSRS 721

Query:   704 XXXXXXXX---XXXXWVISCMLSRNLQVLVSH---------DPEVLSDL--ERFERMAMV 749
                               + ++   L  L  H         DP +   +  +  E++  +
Sbjct:   722 NSVTEDNNQNHSSTTTTSTGLVYFPLYALDMHEQGRYMELADPRLEGRVTSQEAEKLVRI 781

Query:   750 GLWCNHPDPNLRPSMKKVIHMLEGTLEVGMP 780
              L C H +P LRP+M  V+ M EG++ +G P
Sbjct:   782 ALCCVHEEPALRPTMAAVVGMFEGSIPLGNP 812

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

TAIR|locus:2137010 AT4G11900 [Arabidopsis thaliana (taxid:3702)]

 Score = 609 (219.4 bits), Expect = 6.8e-65, Sum P(2) = 6.8e-65
 Identities = 196/738 (26%), Positives = 341/738 (46%)

Query:    78 AADRDSPAEAGSKIT--LTNDGKLLL--TYFNGSVQQIYSGAASLALMQNDGNFVLK--- 130
             +A R S  E  S+ +    ++G LL   T ++  V    S     A++ + GN VL+   
Sbjct:   113 SATRKSHTEGTSRRSPQKISEGNLLFHETVWSTGVNSSMSKDVQ-AVLFDSGNLVLRDGP 171

Query:   131 NANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAY 190
             N+++AV+W SFD P+DT LPG  +  G +L+++     D S G Y+LE     + +++ +
Sbjct:   172 NSSAAVLWQSFDHPSDTWLPGGKIRLGSQLFTSWESLIDPSPGRYSLEFDPKLHSLVTVW 231

Query:   191 HFADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYY--HRATI 248
             +     YW +G +       + +   F  L  +       +  + +T + D    +R  +
Sbjct:   232 N-RSKSYWSSGPL----YDWLQSFKGFPELQGTKLSFTLNMDESYITFSVDPQSRYRLVM 286

Query:   249 DGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETVTCNCIPGYTP 308
                G F    +H    S W  +    ++ C V   CG +G+C + + E   C C+PG+  
Sbjct:   287 GVSGQFMLQVWHVDLQS-WRVILSQPDNRCDVYNSCGSFGIC-NENREPPPCRCVPGFKR 344

Query:   309 L------NPSDVSEGCHPETVVNYCAETSSKNFTVEVMDDAGFLFDNFADLARVSNVDVE 362
                    + +D S GC  ET + +C + + +   +E M     L  +    + +++    
Sbjct:   345 EFSQGSDDSNDYSGGCKRETYL-HCYKRNDEFLPIENMK----LATDPTTASVLTSGTFR 399

Query:   363 GCRKAVMDDCYSLGASLVGSTCVKTRMPLLNARKSASTKGMKAIIKVPTKMSNPSNHEGK 422
              C    + DC     +  G+ C+       N ++  + KG    +++ +  SN S    +
Sbjct:   400 TCASRCVADCSCQAYANDGNKCLVWTKDAFNLQQLDANKGHTFFLRLAS--SNISTANNR 457

Query:   423 KKNNFNSRLLLKIGFIFSAICALLSGVAAIYYSPAARGLIKRRNYFDPNSMEI------- 475
             K  +   + ++ +  + +++ A  +    +Y   ++R   K++   + +S E+       
Sbjct:   458 KTEHSKGKSIV-LPLVLASLVATAACFVGLYCCISSRIRRKKKQRDEKHSRELLEGGLID 516

Query:   476 ----NFREFTFQELQEATKGFS--KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK 529
                 N       ++  AT  FS  K +G G  G VY+G L      +E+A+K+L K   +
Sbjct:   517 DAGENMCYLNLHDIMVATNSFSRKKKLGEGGFGPVYKGKL---PNGMEVAIKRLSKKSSQ 573

Query:   530 TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFH--EGQRPGW 587
                EF  E+ +I +  HKNLVRLLG+C E D++LL+YE M N +L   LF   + +   W
Sbjct:   574 GLTEFKNEVVLIIKLQHKNLVRLLGYCVEGDEKLLIYEYMSNKSLDGLLFDSLKSRELDW 633

Query:   588 VQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
               R++I  G  RGL YLHE    +IIH D+K  N+LLD    + N   KISDFG +++  
Sbjct:   634 ETRMKIVNGTTRGLQYLHEYSRLRIIHRDLKASNILLDD---EMN--PKISDFGTARIFG 688

Query:   648 KDQTRTDTN-MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXX 706
               Q    T  + GT GY++PE+     ++ K D++SFGV+LLEII G++           
Sbjct:   689 CKQIDDSTQRIVGTFGYMSPEYALGGVISEKSDIYSFGVLLLEIISGKKATRFVHNDQKH 748

Query:   707 XXXXXXXXXWVISCMLSRNLQVLVSHDPEVLS-DLERFERMAMVGLWCNHPDPNLRPSMK 765
                      W   C  ++ + ++   +P   S  LE   R   + L C    P  RP + 
Sbjct:   749 SLIAYEWESW---CE-TKGVSII--DEPMCCSYSLEEAMRCIHIALLCVQDHPKDRPMIS 802

Query:   766 KVIHML--EGTLEVGMPP 781
             ++++ML  + TL +   P
Sbjct:   803 QIVYMLSNDNTLPIPKQP 820

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2197744 AT1G61420 [Arabidopsis thaliana (taxid:3702)]

 Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
 Identities = 211/750 (28%), Positives = 349/750 (46%)

Query:    65 IWFDKIPEKTLVWAADRDSPA-EAGSKITLTNDGKLLLTYFNGSVQQIYSGAASL----- 118
             IWF  I  + +VW A+R+ P  ++ + + ++N+G LLL  FNG     +S   +L     
Sbjct:    62 IWFKGIIPRVVVWVANREKPVTDSTANLAISNNGSLLL--FNGKHGVAWSSGEALVSNGS 119

Query:   119 -ALMQNDGNF-VLKNANSAVVWDSFDFPTDTILPGQVL----LTGKK-LYSNSRGTADYS 171
              A + + GN  V+ N +   +W SFD   DT+LP   L     TG+K + S+ +   D S
Sbjct:   120 RAELSDTGNLIVIDNFSGRTLWQSFDHLGDTMLPSSTLKYNLATGEKQVLSSWKSYTDPS 179

Query:   172 TGNYTLEM--QADGNLVLS--AYHFADPGYW----YTGTVTLNNVSLIFNQSAFMYLINS 223
              G++ L++  Q    ++++  +  +   G W    +TG   +++        +     N 
Sbjct:   180 VGDFVLQITPQVPTQVLVTKGSTPYYRSGPWAKTRFTGIPLMDDT--FTGPVSVQQDTNG 237

Query:   224 TGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCI 283
             +G   + L RN      D   R  +   G  Q+ ++H  T   W   + A    C    +
Sbjct:   238 SGSLTY-LNRN------DRLQRTMLTSKGT-QELSWHNGTD--WVLNFVAPEHSCDYYGV 287

Query:   284 CGVYGMCTSSDNETVTCNCIPGYTPL-----NPSDVSEGCHPETVVNYCAETSSKNFTVE 338
             CG +G+C  S      C C  G+ P         + + GC   T + YC   S+  +   
Sbjct:   288 CGPFGLCVKS--VPPKCTCFKGFVPKLIEEWKRGNWTGGCVRRTEL-YCQGNSTGKYANV 344

Query:   339 VMDDAGFLFDNFADLARVSNVDVEGCRKAVMDDCYSLGASLV-GSTCVKTRMPLLNARKS 397
                 A     +F + A  S V+VE C+K+ + +C  L  + + G  C+     L++A + 
Sbjct:   345 FHPVARIKPPDFYEFA--SFVNVEECQKSCLHNCSCLAFAYIDGIGCLMWNQDLMDAVQF 402

Query:   398 ASTKGMKAIIKVPTKMSNPSNHEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAIYYSPA 457
             +    + +I    +++      +    +  +  L++ I F+  A C     V        
Sbjct:   403 SEGGELLSIRLARSELGGNKRKKAITASIVSLSLVVIIAFV--AFCFWRYRVKHNADITT 460

Query:   458 ARGLIKRRNYFDPNSME-INFREFTFQELQEATKGFS--KLVGTGSSGKVYRGILRLKDT 514
                 +  RN   P  +  ++F  F    +Q AT  FS    +G G  G VY+G  +L+D 
Sbjct:   461 DASQVSWRNDLKPQDVPGLDF--FDMHTIQTATNNFSISNKLGQGGFGPVYKG--KLQDG 516

Query:   515 QIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTL 574
             + EIAVK+L     +  EEFM E+ +I +  HKNLVR+LG C E +++LL+YE M N +L
Sbjct:   517 K-EIAVKRLSSSSGQGKEEFMNEIVLISKLQHKNLVRILGCCIEGEEKLLIYEFMLNNSL 575

Query:   575 SNFLFHEGQRP--GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTN 632
               FLF   +R    W +R++I  G+ARG+ YLH +   ++IH D+K  N+LLD K    N
Sbjct:   576 DTFLFDSRKRLEIDWPKRLDIIQGIARGIHYLHRDSHLKVIHRDLKVSNILLDEKM---N 632

Query:   633 YMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
                KISDFG++++    + + +T  + GT+GY+APE+      + K D++SFGV++LEII
Sbjct:   633 --PKISDFGLARMYQGTEYQDNTRRVVGTLGYMAPEYAWTGMFSEKSDIYSFGVLMLEII 690

Query:   692 CGRRHXXXXXXXXXXXXXXXXXXXWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGL 751
              G +                    W   C     + +L     +    LE  ER   +GL
Sbjct:   691 SGEKISRFSYGKEEKTLIAYAWESW---CDTG-GIDLLDKDVADSCRPLE-VERCVQIGL 745

Query:   752 WCNHPDPNLRPSMKKVIHMLEGTLEVGMPP 781
              C    P  RP+  +++ ML  T +  +PP
Sbjct:   746 LCVQHQPADRPNTLELLSMLTTTSD--LPP 773

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2197709 AT1G61480 [Arabidopsis thaliana (taxid:3702)]

 Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
 Identities = 215/751 (28%), Positives = 353/751 (47%)

Query:    65 IWFDKIPEKTLVWAADRDSPA-EAGSKITLTNDGKLLLTYFNGSVQ----QIYSGAASLA 119
             IWF  I  + +VW A+R+ P  ++ + +T++++G LLL   N SV     + ++   S A
Sbjct:    62 IWFKGIIPRVVVWVANREKPVTDSAANLTISSNGSLLLFNENHSVVWSIGETFASNGSRA 121

Query:   120 LMQNDGNFVLKNANSA-VVWDSFDFPTDTILPGQVLL----TG-KKLYSNSRGTADYSTG 173
              + ++GN V+ + NS   +W+SF+   DT+LP   L+    TG K++ ++ +   D S G
Sbjct:   122 ELTDNGNLVVIDNNSGRTLWESFEHFGDTMLPFSNLMYNLATGEKRVLTSWKSHTDPSPG 181

Query:   174 NYTLEMQADGNLVLSAYHFADPGYWYTGT---VTLNNVSLIFNQ--SAFMYLINSTGDNI 228
             ++T+++                 YW +G         + ++ +   S F    ++ G   
Sbjct:   182 DFTVQITPQVPSQACTMR-GSKTYWRSGPWAKTRFTGIPVMDDTYTSPFSLQQDTNGSGS 240

Query:   229 FR-LTRNVMTPTEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVY 287
             F    RN       Y     I   G+ + F ++      W   + A  + C +   CG +
Sbjct:   241 FTYFERNFKL---SYI---MITSEGSLKIFQHN---GMDWELNFEAPENSCDIYGFCGPF 291

Query:   288 GMCTSSDNETVTCNCIPGYTPLNPSDV-----SEGCHPETVVNYCAETSSKNFTVE-VMD 341
             G+C  S      C C  G+ P +  +      ++GC   T ++    T+ K  TV     
Sbjct:   292 GICVMS--VPPKCKCFKGFVPKSIEEWKRGNWTDGCVRHTELHCQGNTNGK--TVNGFYH 347

Query:   342 DAGFLFDNFADLARVSNVDVEGCRKAVMDDCYSLGASLV-GSTCVKTRMPLLNARKSAST 400
              A     +F + A  S VD EGC +  + +C  L  + + G  C+     L++A +  S 
Sbjct:   348 VANIKPPDFYEFA--SFVDAEGCYQICLHNCSCLAFAYINGIGCLMWNQDLMDAVQF-SA 404

Query:   401 KGMKAIIKVPTKMSNPSNHEGKKKNNFNSRLLLKIG-FI---FSAICALLSGVAAIYYSP 456
              G   I+ +  ++++ S   G K+N      ++ +  F+   F+A C L   V     + 
Sbjct:   405 GG--EILSI--RLAS-SELGGNKRNKIIVASIVSLSLFVILAFAAFCFLRYKVKHTVSAK 459

Query:   457 AARGLIKR--RNYFDPNSMEINFREFTFQELQEATKGFS--KLVGTGSSGKVYRGILRLK 512
              ++   K    N  +P  +    + F    +Q AT  FS    +G G  G VY+G  +L+
Sbjct:   460 ISKIASKEAWNNDLEPQDVS-GLKFFEMNTIQTATDNFSLSNKLGQGGFGSVYKG--KLQ 516

Query:   513 DTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG 572
             D + EIAVK+L     +  EEFM E+ +I +  HKNLVR+LG C E ++RLLVYE + N 
Sbjct:   517 DGK-EIAVKRLSSSSGQGKEEFMNEIVLISKLQHKNLVRILGCCIEGEERLLVYEFLLNK 575

Query:   573 TLSNFLFHEGQRP--GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD 630
             +L  FLF   +R    W +R  I  G+ARGL YLH +   ++IH D+K  N+LLD K   
Sbjct:   576 SLDTFLFDSRKRLEIDWPKRFNIIEGIARGLHYLHRDSCLRVIHRDLKVSNILLDEKM-- 633

Query:   631 TNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLE 689
              N   KISDFG++++    + + +T  + GT+GY+APE+      + K D++SFGV+LLE
Sbjct:   634 -N--PKISDFGLARMYQGTEYQDNTRRVAGTLGYMAPEYAWTGMFSEKSDIYSFGVILLE 690

Query:   690 IICGRRHXXXXXXXXXXXXXXXXXXXWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMV 749
             II G +                    W   C  S  + +L     +    LE  ER   +
Sbjct:   691 IITGEKISRFSYGRQGKTLLAYAWESW---CE-SGGIDLLDKDVADSCHPLE-VERCVQI 745

Query:   750 GLWCNHPDPNLRPSMKKVIHMLEGTLEVGMP 780
             GL C    P  RP+  +++ ML  T ++  P
Sbjct:   746 GLLCVQHQPADRPNTMELLSMLTTTSDLTSP 776

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 429 (156.1 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
 Identities = 115/331 (34%), Positives = 173/331 (52%)

Query:   461 LIKRRNYFDPNSMEINFREFTFQELQE---ATKGFSK--LVGTGSSGKVYRGILRLKDTQ 515
             ++ RR Y         + E    EL+    AT  FS    +G G  G VY+G  RL D +
Sbjct:   486 VVSRRGYTSKEKKS-EYLELPLLELEALATATNNFSNDNKLGQGGFGIVYKG--RLLDGK 542

Query:   516 IEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLS 575
              EIAVK+L K   +  +EFM E+++I +  H NLVRLLG C ++ +++L+YE + N +L 
Sbjct:   543 -EIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLD 601

Query:   576 NFLFHEGQRPG--WVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNY 633
             + LF + +     W +R +I  G+ARGLLYLH++   +IIH D+K  NVLLD      N 
Sbjct:   602 SHLFDQTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLD-----KNM 656

Query:   634 MAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC 692
               KISDFG++++  +++T  +T  + GT GY++PE+  +   + K DVFSFGV+LLEII 
Sbjct:   657 TPKISDFGMARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEIIS 716

Query:   693 GRRHXXXXXXXXXXXXXXXXXXXWVISCMLSRNLQVLVSHDPEVLSD---LERFERMAMV 749
             G+R+                   W         L+++   + + LS         R   +
Sbjct:   717 GKRNKGFYNSNRDLNLLGFVWRHW----KEGNELEIVDPINIDSLSSKFPTHEILRCIQI 772

Query:   750 GLWCNHPDPNLRPSMKKVIHMLEGTLEVGMP 780
             GL C       RP M  V+ ML G+    +P
Sbjct:   773 GLLCVQERAEDRPVMSSVMVML-GSETTAIP 802

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0009875 "pollen-pistil interaction" evidence=TAS

GO:0016020 "membrane" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019199 "transmembrane receptor protein kinase activity" evidence=ISS

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 429 (156.1 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
 Identities = 116/332 (34%), Positives = 179/332 (53%)

Query:   457 AARGLIKRRNYFDPNSMEINFREFTFQELQEATKGFS--KLVGTGSSGKVYRGILRLKDT 514
             A+R    + N  D   +E+   E+  + L  AT  FS    +G G  G VY+G+L   D 
Sbjct:   492 ASRSYTSKENKTD--YLELPLMEW--KALAMATNNFSTDNKLGQGGFGIVYKGMLL--DG 545

Query:   515 QIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTL 574
             + EIAVK+L K   +  +EFM E+++I +  H NLVRLLG C ++ +++L+YE + N +L
Sbjct:   546 K-EIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSL 604

Query:   575 SNFLFHEGQRPG--WVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTN 632
              + LF + +     W +R +I  G+ARGLLYLH++   +IIH D+K  NVLLD      N
Sbjct:   605 DSHLFDQTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLD-----KN 659

Query:   633 YMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
                KISDFG++++  +++T  +T  + GT GY++PE+  +   + K DVFSFGV+LLEII
Sbjct:   660 MTPKISDFGMARIFGREETEANTRRVVGTYGYMSPEYAMDGIFSMKSDVFSFGVLLLEII 719

Query:   692 CGRRHXXXXXXXXXXXXXXXXXXXWVISCMLSRNLQVLVSHDPEVLS-DLERFE--RMAM 748
              G+R+                   W       + L+++   + + LS +    E  R   
Sbjct:   720 SGKRNKGFYNSNRDLNLLGFVWRHW----KEGKELEIVDPINIDALSSEFPTHEILRCIQ 775

Query:   749 VGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMP 780
             +GL C       RP M  V+ ML G+    +P
Sbjct:   776 IGLLCVQERAEDRPVMSSVMVML-GSETTAIP 806

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0034613 "cellular protein localization" evidence=IGI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)]

 Score = 494 (179.0 bits), Expect = 1.7e-59, Sum P(2) = 1.7e-59
 Identities = 116/312 (37%), Positives = 177/312 (56%)

Query:   469 DPNSMEINFREFTFQELQEATKGFS--KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD 526
             +   +E+ F +     + EAT GFS    +G G  G VY+G L       E+AVK+L + 
Sbjct:   444 EEEDLELPFLDL--DTVSEATSGFSAGNKLGQGGFGPVYKGTLACGQ---EVAVKRLSRT 498

Query:   527 IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP- 585
               +  EEF  E+K+I +  H+NLV++LG+C +E++R+L+YE  PN +L +F+F + +R  
Sbjct:   499 SRQGVEEFKNEIKLIAKLQHRNLVKILGYCVDEEERMLIYEYQPNKSLDSFIFDKERRRE 558

Query:   586 -GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK 644
               W +RVEI  G+ARG+LYLHE+   +IIH D+K  NVLLD    D N  AKISDFG+++
Sbjct:   559 LDWPKRVEIIKGIARGMLYLHEDSRLRIIHRDLKASNVLLDS---DMN--AKISDFGLAR 613

Query:   645 LLNKDQTRTDTN-MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXX 703
              L  D+T  +T  + GT GY++PE+  +   + K DVFSFGV++LEI+ GRR+       
Sbjct:   614 TLGGDETEANTTRVVGTYGYMSPEYQIDGYFSLKSDVFSFGVLVLEIVSGRRNRGFRNEE 673

Query:   704 XXXXXXXXXXXXWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS 763
                         W    +  +  +++     E  +D+    R+  +GL C   DP  RP+
Sbjct:   674 HKLNLLGHA---WR-QFLEDKAYEIIDEAVNESCTDISEVLRVIHIGLLCVQQDPKDRPN 729

Query:   764 MKKVIHMLEGTL 775
             M  V+ ML   +
Sbjct:   730 MSVVVLMLSSEM 741

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0048765 "root hair cell differentiation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q39202	RLK1_ARATH	2, ., 7, ., 1, 1, ., 1	0.3393	0.9555	0.9050	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00130591 hypothetical protein (787 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	788
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-51
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	7e-50
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-48
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-48
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-47
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-46
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	5e-40
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-39
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	6e-32
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-31
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-29
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	9e-29
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	9e-28
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	4e-27
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	8e-27
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-26
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	5e-26
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	5e-26
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	3e-25
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	8e-25
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	9e-25
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	1e-24
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	3e-24
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	5e-24
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	5e-24
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	5e-24
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	8e-24
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	9e-24
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-23
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-23
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	3e-23
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	3e-23
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-23
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	4e-23
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	4e-23
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	5e-23
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	7e-23
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	9e-23
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-22
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	2e-22
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-22
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-22
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	4e-22
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	6e-22
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	8e-22
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	1e-21
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-21
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	2e-21
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	4e-21
pfam01453	109	pfam01453, B_lectin, D-mannose binding lectin	8e-21
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	2e-20
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	3e-20
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	3e-20
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	4e-20
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	9e-20
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	1e-19
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	1e-19
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-19
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-19
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	3e-19
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	4e-19
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-18
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	1e-18
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-18
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-18
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	2e-18
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-18
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	2e-18
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	3e-18
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	4e-18
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	5e-18
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	5e-18
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	6e-18
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-17
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	1e-17
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	1e-17
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-17
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	2e-17
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	2e-17
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-17
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	3e-17
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	3e-17
smart00108	114	smart00108, B_lectin, Bulb-type mannose-specific l	3e-17
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	3e-17
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	5e-17
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	5e-17
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	5e-17
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	6e-17
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	8e-17
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	8e-17
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	8e-17
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	9e-17
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	9e-17
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	9e-17
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-16
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	1e-16
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-16
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	2e-16
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-16
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	2e-16
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	2e-16
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	3e-16
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	3e-16
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-16
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	3e-16
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	3e-16
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	3e-16
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	4e-16
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	4e-16
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	5e-16
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	5e-16
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	6e-16
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	8e-16
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	1e-15
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-15
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	1e-15
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	2e-15
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	2e-15
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	2e-15
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-15
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	2e-15
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	3e-15
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	4e-15
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	5e-15
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	5e-15
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	6e-15
cd00028	116	cd00028, B_lectin, Bulb-type mannose-specific lect	6e-15
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	6e-15
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	8e-15
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	8e-15
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	9e-15
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	2e-14
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-14
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	2e-14
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-14
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	2e-14
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	3e-14
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	3e-14
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	4e-14
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	4e-14
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	6e-14
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	6e-14
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	1e-13
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	1e-13
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-13
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	2e-13
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-13
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-13
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-13
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	3e-13
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	3e-13
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	4e-13
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	5e-13
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	6e-13
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	6e-13
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	7e-13
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	7e-13
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	8e-13
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	9e-13
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	1e-12
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	1e-12
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	1e-12
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	1e-12
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	2e-12
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-12
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-12
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-12
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	2e-12
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-12
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	3e-12
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	3e-12
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	3e-12
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	3e-12
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	4e-12
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	4e-12
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	6e-12
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	6e-12
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	6e-12
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	7e-12
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	8e-12
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	1e-11
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	1e-11
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-11
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-11
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	2e-11
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	2e-11
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	2e-11
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	3e-11
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	3e-11
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	3e-11
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	4e-11
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	5e-11
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	5e-11
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	5e-11
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	6e-11
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	6e-11
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	7e-11
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	7e-11
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	7e-11
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	8e-11
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	9e-11
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	9e-11
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	9e-11
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	1e-10
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	1e-10
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	1e-10
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	1e-10
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	1e-10
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	1e-10
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	1e-10
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	1e-10
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	1e-10
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	1e-10
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	1e-10
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	1e-10
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	2e-10
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-10
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	2e-10
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	2e-10
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-10
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	3e-10
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	3e-10
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	3e-10
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	3e-10
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	3e-10
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	4e-10
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	4e-10
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	5e-10
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	5e-10
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	6e-10
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	6e-10
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	7e-10
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	7e-10
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	9e-10
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	9e-10
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-09
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	2e-09
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	2e-09
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-09
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-09
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	3e-09
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	4e-09
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	4e-09
pfam00954	110	pfam00954, S_locus_glycop, S-locus glycoprotein fa	4e-09
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	5e-09
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	6e-09
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	7e-09
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	9e-09
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	9e-09
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	9e-09
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-08
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	2e-08
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	2e-08
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	2e-08
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	3e-08
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	5e-08
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	6e-08
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	6e-08
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	7e-08
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	1e-07
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	1e-07
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	2e-07
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	3e-07
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	3e-07
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	4e-07
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	4e-07
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	5e-07
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	7e-07
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	8e-07
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	9e-07
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	9e-07
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	1e-06
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	2e-06
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	2e-06
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	4e-06
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	5e-06
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	5e-06
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	5e-06
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	1e-05
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	1e-05
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	1e-05
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	1e-05
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	2e-05
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	2e-05
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	3e-05
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	3e-05
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	3e-05
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	3e-05
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	4e-05
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	4e-05
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	9e-05
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	9e-05
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	1e-04
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	1e-04
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	1e-04
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	1e-04
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	2e-04
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	2e-04
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	6e-04
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	0.001
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	0.001
pfam01453	109	pfam01453, B_lectin, D-mannose binding lectin	0.004
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  178 bits (455), Expect = 1e-51
 Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 12/197 (6%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G  G VY    R K T  ++A+K ++K+   +  EE + E++I+ + +H N+V+L G
Sbjct: 1   LGEGGFGTVYLA--RDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYG 58

Query: 555 FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
              +E+   LV E    G+L + L     +    + + I L +  GL YLH      IIH
Sbjct: 59  VFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIH 115

Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE-WLRNVP 673
            D+KP+N+LLD      N   K++DFG+SKLL          + GT  Y+APE  L    
Sbjct: 116 RDLKPENILLD----SDNGKVKLADFGLSKLLT-SDKSLLKTIVGTPAYMAPEVLLGKGY 170

Query: 674 VTTKVDVFSFGVMLLEI 690
            + K D++S GV+L E+
Sbjct: 171 YSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  175 bits (446), Expect = 7e-50
 Identities = 85/286 (29%), Positives = 132/286 (46%), Gaps = 44/286 (15%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVR 551
           + +G+GS G VY+   + K T   +AVK L+K     K ++    E++I+ R  H N+VR
Sbjct: 5   RKLGSGSFGTVYKA--KHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVR 62

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L+    ++D   LV E    G L ++L   G      +  +IAL + RGL YLH      
Sbjct: 63  LIDAFEDKDHLYLVMEYCEGGDLFDYLSRGG-PLSEDEAKKIALQILRGLEYLHSN---G 118

Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR- 670
           IIH D+KP+N+L     LD N + KI+DFG++K L K  +   T   GT  Y+APE L  
Sbjct: 119 IIHRDLKPENIL-----LDENGVVKIADFGLAKKLLKSSSSLTT-FVGTPWYMAPEVLLG 172

Query: 671 NVPVTTKVDVFSFGVMLLEIICGR-------RHIELSRVEEESEEVDIVLSDWVISCMLS 723
                 KVDV+S GV+L E++ G+          +L  +         +  D       S
Sbjct: 173 GNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGP--PLEFDEPKWSSGS 230

Query: 724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH 769
              + L+                      C + DP+ RP+ ++++ 
Sbjct: 231 EEAKDLIK--------------------KCLNKDPSKRPTAEEILQ 256

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  172 bits (438), Expect = 1e-48
 Identities = 69/202 (34%), Positives = 105/202 (51%), Gaps = 14/202 (6%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRL 552
           + +G GS GKVY    R K T   +A+K ++K  I+K  E  + E+KI+ +  H N+VRL
Sbjct: 5   EKLGEGSFGKVYLA--RDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRL 62

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQI 612
                +EDK  LV E    G L + L   G+      R      +   L YLH +    I
Sbjct: 63  YDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEAR-FYLRQILSALEYLHSK---GI 118

Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV 672
           +H D+KP+N+LLD      +   K++DFG+++ L+  +  T     GT  Y+APE L   
Sbjct: 119 VHRDLKPENILLD-----EDGHVKLADFGLARQLDPGEKLTT--FVGTPEYMAPEVLLGK 171

Query: 673 PVTTKVDVFSFGVMLLEIICGR 694
                VD++S GV+L E++ G+
Sbjct: 172 GYGKAVDIWSLGVILYELLTGK 193

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  171 bits (436), Expect = 2e-48
 Identities = 87/294 (29%), Positives = 142/294 (48%), Gaps = 52/294 (17%)

Query: 492 FSKLVGTGSSGKVYRGILR--LKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKN 548
             K +G G+ G+VY+G L+      ++E+AVK L++D  E+  EEF+ E +I+ +  H N
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPN 62

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           +V+LLG C+EE+  ++V E MP G L ++L  +  +       +  AL +ARG+ YL  +
Sbjct: 63  IVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK 122

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
                IH D+  +N L     +  N + KISDFG+S+ L  D        +  + ++APE
Sbjct: 123 ---NFIHRDLAARNCL-----VGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPE 174

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ 727
            L+    T+K DV+SFGV+L EI         +  EE    +                  
Sbjct: 175 SLKEGKFTSKSDVWSFGVLLWEI--------FTLGEEPYPGMS----------------- 209

Query: 728 VLVSHDPEVLSDLERFERM----------AMVGLWCNHPDPNLRPSMKKVIHML 771
                + EVL  L++  R+            + L C   DP  RP+  +++ +L
Sbjct: 210 -----NAEVLEYLKKGYRLPKPPNCPPELYKLMLQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  168 bits (429), Expect = 2e-47
 Identities = 85/293 (29%), Positives = 138/293 (47%), Gaps = 51/293 (17%)

Query: 492 FSKLVGTGSSGKVYRGILR--LKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKN 548
             K +G G+ G+VY+G L+      ++E+AVK L++D  E+  EEF+ E +I+ +  H N
Sbjct: 3   LGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPN 62

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           +V+LLG C+EE+   +V E M  G L ++L     +      +  AL +ARG+ YL  + 
Sbjct: 63  VVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLESK- 121

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
               IH D+  +N L     +  N + KISDFG+S+ L  D        +  + ++APE 
Sbjct: 122 --NFIHRDLAARNCL-----VGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPES 174

Query: 669 LRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV 728
           L+    T+K DV+SFGV+L EI         +  E+    +                   
Sbjct: 175 LKEGKFTSKSDVWSFGVLLWEI--------FTLGEQPYPGMS------------------ 208

Query: 729 LVSHDPEVLSDLERFERM----------AMVGLWCNHPDPNLRPSMKKVIHML 771
               + EVL  L+   R+            + L C   DP  RP+  +++ +L
Sbjct: 209 ----NEEVLEYLKNGYRLPQPPNCPPELYDLMLQCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  166 bits (423), Expect = 1e-46
 Identities = 86/289 (29%), Positives = 142/289 (49%), Gaps = 42/289 (14%)

Query: 492 FSKLVGTGSSGKVYRGILRLKD--TQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKN 548
             K +G G+ G+VY+G L+     T+ ++AVK L E   E+  EEF+ E  I+ +  H N
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPN 62

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           +VRLLG C++ +   +V E MP G L +FL   G++      +++AL +A+G+ YL  + 
Sbjct: 63  IVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLESK- 121

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL-NKDQTRTDTNMRGTMGYVAPE 667
               +H D+  +N L     +  N + KISDFG+S+ +   D  R     +  + ++APE
Sbjct: 122 --NFVHRDLAARNCL-----VTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPE 174

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIIC-GRRH---IELSRVEEESEEVDIVLSDWVISCMLS 723
            L++   T+K DV+SFGV+L EI   G +    +    V E                +L 
Sbjct: 175 SLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLE----------------LLE 218

Query: 724 RNLQVLVSHD-PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML 771
              ++    + P+ L +L     M      C   DP  RP+  +++  L
Sbjct: 219 DGYRLPRPENCPDELYEL-----MLQ----CWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  148 bits (375), Expect = 5e-40
 Identities = 86/291 (29%), Positives = 143/291 (49%), Gaps = 41/291 (14%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQ-IEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           K +G G+ G+VY+G L+ KD +  E+AVK L E   E+  ++F+ E +++ +  H N+VR
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFL--------FHEGQRPGWVQRVEIALGVARGLLY 603
           LLG C+EE+   LV E M  G L ++L          E         +  A+ +A+G+ Y
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY 120

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ-TRTDTNMRGTMG 662
           L  +   + +H D+  +N L     +  + + KISDFG+S+ +  D   R  T  +  + 
Sbjct: 121 LASK---KFVHRDLAARNCL-----VGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIR 172

Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVD-IVLSDWVISCM 721
           ++APE L++   T+K DV+SFGV+L EI         +        +    + +++    
Sbjct: 173 WMAPESLKDGIFTSKSDVWSFGVLLWEIF--------TLGATPYPGLSNEEVLEYLRKG- 223

Query: 722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
             R  +      PE   D E +E M    L C   DP  RP+  +++  LE
Sbjct: 224 -YRLPK------PEYCPD-ELYELM----LSCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  145 bits (369), Expect = 3e-39
 Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 28/217 (12%)

Query: 489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKK--LEKDIEKTNEEFMTELKIIGRTHH 546
           T+G  +L+G GS G VY  +   KDT   +AVK   L  D E+  E    E++I+    H
Sbjct: 3   TRG--ELLGRGSFGSVYLAL--DKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQH 58

Query: 547 KNLVRLLGFC-SEEDKRLLVY-ELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVAR 599
            N+VR  G    EE   L ++ E +  G+LS+ L       E      +++      +  
Sbjct: 59  PNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPV----IRKY--TRQILE 112

Query: 600 GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MR 658
           GL YLH      I+H DIK  N+L     +D++ + K++DFG +K L   +T   T  +R
Sbjct: 113 GLAYLHSN---GIVHRDIKGANIL-----VDSDGVVKLADFGCAKRLGDIETGEGTGSVR 164

Query: 659 GTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           GT  ++APE +R        D++S G  ++E+  G+ 
Sbjct: 165 GTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKP 201

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  125 bits (315), Expect = 6e-32
 Identities = 68/205 (33%), Positives = 108/205 (52%), Gaps = 18/205 (8%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           K++G GSSG VY+   R K T    A+KK+     E+  ++ + ELK +       +V+ 
Sbjct: 7   KVLGQGSSGVVYKV--RHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKC 64

Query: 553 LG-FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV--EIALGVARGLLYLHEECE 609
            G F  E +  + V E M  G+L++ L    +     + V   IA  + +GL YLH +  
Sbjct: 65  YGAFYKEGEISI-VLEYMDGGSLADLL---KKVGKIPEPVLAYIARQILKGLDYLHTK-- 118

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             IIH DIKP N+L++ K        KI+DFGISK+L     + +T + GT+ Y++PE +
Sbjct: 119 RHIIHRDIKPSNLLINSKG-----EVKIADFGISKVLENTLDQCNTFV-GTVTYMSPERI 172

Query: 670 RNVPVTTKVDVFSFGVMLLEIICGR 694
           +    +   D++S G+ LLE   G+
Sbjct: 173 QGESYSYAADIWSLGLTLLECALGK 197

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  126 bits (315), Expect = 3e-31
 Identities = 75/290 (25%), Positives = 125/290 (43%), Gaps = 35/290 (12%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE---FMTELKIIGR-THHKNL 549
           + +G GS G+VY    R       +A+K L K +E  ++E   F+ E++I+    H  N+
Sbjct: 6   RKLGEGSFGEVYLARDRKL-----VALKVLAKKLESKSKEVERFLREIQILASLNHPPNI 60

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWV--QRVEIALGVARGLLYLHEE 607
           V+L  F  +E    LV E +  G+L + L   G++      + + I   +   L YLH +
Sbjct: 61  VKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK 120

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR-----GTMG 662
               IIH DIKP+N+LLD        + K+ DFG++KLL    + +          GT G
Sbjct: 121 G---IIHRDIKPENILLD----RDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPG 173

Query: 663 YVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVIS 719
           Y+APE L        ++  D++S G+ L E++ G    E  +    + +   ++ +    
Sbjct: 174 YMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP 233

Query: 720 CMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH 769
            + S           +  SDL +              DP  R S    + 
Sbjct: 234 SLASPLSPSNPELISKAASDLLK---------KLLAKDPKNRLSSSSDLS 274

Length = 384

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  118 bits (297), Expect = 1e-29
 Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 18/202 (8%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY+   R K T  E+A+K ++ + ++  E+ + E++I+ +  H N+V+  G 
Sbjct: 8   IGKGGFGEVYKA--RHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGS 65

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIA---LGVARGLLYLHEECETQI 612
             ++D+  +V E    G+L + L    Q    +   +IA     + +GL YLH      I
Sbjct: 66  YLKKDELWIVMEFCSGGSLKDLLKSTNQT---LTESQIAYVCKELLKGLEYLHSN---GI 119

Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV 672
           IH DIK  N+LL      ++   K+ DFG+S  L+   T+    M GT  ++APE +   
Sbjct: 120 IHRDIKAANILLT-----SDGEVKLIDFGLSAQLSD--TKARNTMVGTPYWMAPEVINGK 172

Query: 673 PVTTKVDVFSFGVMLLEIICGR 694
           P   K D++S G+  +E+  G+
Sbjct: 173 PYDYKADIWSLGITAIELAEGK 194

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  115 bits (290), Expect = 9e-29
 Identities = 75/207 (36%), Positives = 109/207 (52%), Gaps = 25/207 (12%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEE--FMTELKIIGRTHHKNLVRL 552
           +G GS GKV   ++R KDT    A+K L+K  I K  E    +TE  I+ R +H  +V+L
Sbjct: 1   LGKGSFGKVL--LVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKL 58

Query: 553 LGFCS--EEDKRLLVYELMPNGTLSNFLFHEGQRP-GWVQR--VEIALGVARGLLYLHEE 607
               +   E+K  LV E  P G L + L  EG+      +    EI L     L YLH  
Sbjct: 59  --HYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLA----LEYLHSL 112

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               II+ D+KP+N+LLD       +  K++DFG++K L+ + +RT+T   GT  Y+APE
Sbjct: 113 ---GIIYRDLKPENILLD----ADGH-IKLTDFGLAKELSSEGSRTNT-FCGTPEYLAPE 163

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            L        VD +S GV+L E++ G+
Sbjct: 164 VLLGKGYGKAVDWWSLGVLLYEMLTGK 190

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  112 bits (283), Expect = 9e-28
 Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 30/214 (14%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKK--LEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           K +G GS GKVY  + R  D ++   +K+  L    EK  E+ + E+KI+ + +H N+++
Sbjct: 6   KQIGKGSFGKVYL-VRRKSDGKL-YVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIK 63

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPG----------WVQRVEIALGVARGL 601
                 E+ K  +V E    G LS  +  + ++ G          W   V++ L     L
Sbjct: 64  YYESFEEKGKLCIVMEYADGGDLSQKI-KKQKKEGKPFPEEQILDWF--VQLCLA----L 116

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YLH     +I+H DIKPQN+ L      +N + K+ DFGISK+L+       T + GT 
Sbjct: 117 KYLHSR---KILHRDIKPQNIFLT-----SNGLVKLGDFGISKVLSSTVDLAKT-VVGTP 167

Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
            Y++PE  +N P   K D++S G +L E+   + 
Sbjct: 168 YYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKH 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score =  110 bits (278), Expect = 4e-27
 Identities = 65/200 (32%), Positives = 102/200 (51%), Gaps = 18/200 (9%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
               +G G  G V  G  R +    ++AVK L KD     + F+ E  ++    H NLV+
Sbjct: 10  LGATIGKGEFGDVMLGDYRGQ----KVAVKCL-KDDSTAAQAFLAEASVMTTLRHPNLVQ 64

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP-GWVQRVEIALGVARGLLYLHEECET 610
           LLG   + +   +V E M  G+L ++L   G+      Q++  AL V  G+ YL E+   
Sbjct: 65  LLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK--- 121

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
             +H D+  +NVL+     +   +AK+SDFG++K  ++ Q      ++ T    APE LR
Sbjct: 122 NFVHRDLAARNVLVS----EDL-VAKVSDFGLAKEASQGQDSGKLPVKWT----APEALR 172

Query: 671 NVPVTTKVDVFSFGVMLLEI 690
               +TK DV+SFG++L EI
Sbjct: 173 EKKFSTKSDVWSFGILLWEI 192

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score =  110 bits (276), Expect = 8e-27
 Identities = 64/202 (31%), Positives = 113/202 (55%), Gaps = 13/202 (6%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQ-IEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLV 550
           K++G G  G+V RG L+L   + I++A+K L K    +K   +F+TE  I+G+  H N++
Sbjct: 10  KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTL-KAGSSDKQRLDFLTEASIMGQFDHPNII 68

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RL G  ++    +++ E M NG+L  FL     +    Q V +  G+A G+ YL E    
Sbjct: 69  RLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN-- 126

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL-NKDQTRTDTNMRGTMGYVAPEWL 669
             +H D+  +N+L     +++N + K+SDFG+S+ L + + T T    +  + + APE +
Sbjct: 127 -YVHRDLAARNIL-----VNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAI 180

Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
                T+  DV+SFG+++ E++
Sbjct: 181 AYRKFTSASDVWSFGIVMWEVM 202

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score =  109 bits (273), Expect = 2e-26
 Identities = 58/196 (29%), Positives = 108/196 (55%), Gaps = 13/196 (6%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G+G  G+V+ G+ +    ++ +A+K L+ D     ++F  E++ + R  HK+L+ L   
Sbjct: 14  LGSGYFGEVWEGLWK---NRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAV 70

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           CS  +   ++ ELM  G+L  FL   EGQ       +++A  VA G+ YL E+     IH
Sbjct: 71  CSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIH 127

Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N+L     +  + + K++DFG+++L+ K+     ++ +    + APE   +   
Sbjct: 128 RDLAARNIL-----VGEDLVCKVADFGLARLI-KEDVYLSSDKKIPYKWTAPEAASHGTF 181

Query: 675 TTKVDVFSFGVMLLEI 690
           +TK DV+SFG++L E+
Sbjct: 182 STKSDVWSFGILLYEM 197

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score =  107 bits (270), Expect = 5e-26
 Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 20/201 (9%)

Query: 496 VGTGSSGKVYRGILRLKDT-QIEIAVKKLEKDIEKTNE-EFMTELKIIGRTHHKNLVRLL 553
           +G G+ G V +G+  +K   ++E+AVK L+++     + EF+ E  ++ +  H  +VRL+
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEI---ALGVARGLLYLHEECET 610
           G C + +  +LV EL P G L  +L    ++   +   ++   A  VA G+ YL E    
Sbjct: 63  GVC-KGEPLMLVMELAPLGPLLKYL----KKRREIPVSDLKELAHQVAMGMAYL-ESK-- 114

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT--RTDTNMRGTMGYVAPEW 668
             +H D+  +NVL     L   + AKISDFG+S+ L       R  T  R  + + APE 
Sbjct: 115 HFVHRDLAARNVL-----LVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPEC 169

Query: 669 LRNVPVTTKVDVFSFGVMLLE 689
           +     ++K DV+S+GV L E
Sbjct: 170 INYGKFSSKSDVWSYGVTLWE 190

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  107 bits (269), Expect = 5e-26
 Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 20/205 (9%)

Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKK--LEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           L+G G+ G VY+G L L+     +A+K+  LEK  E+  +  M E+ ++    H N+V+ 
Sbjct: 7   LIGRGAFGVVYKG-LNLETGDF-VAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKY 64

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVA---RGLLYLHEECE 609
           +G     D   ++ E   NG+L   +    ++ G      +A+ V    +GL YLHE+  
Sbjct: 65  IGSIETSDSLYIILEYAENGSLRQII----KKFGPFPESLVAVYVYQVLQGLAYLHEQ-- 118

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             +IH DIK  N+L    T D     K++DFG++  LN D ++ D ++ GT  ++APE +
Sbjct: 119 -GVIHRDIKAANILT---TKDGV--VKLADFGVATKLN-DVSKDDASVVGTPYWMAPEVI 171

Query: 670 RNVPVTTKVDVFSFGVMLLEIICGR 694
                +T  D++S G  ++E++ G 
Sbjct: 172 EMSGASTASDIWSLGCTVIELLTGN 196

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score =  105 bits (263), Expect = 3e-25
 Identities = 64/203 (31%), Positives = 116/203 (57%), Gaps = 14/203 (6%)

Query: 494 KLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVR 551
           K++G G  G+V+RGIL++    ++ +A+K L+    EK  ++F++E  I+G+  H N++R
Sbjct: 11  KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIR 70

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLF-HEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           L G  ++    +++ E M NG L  +L  H+G+     Q V +  G+A G+ YL    + 
Sbjct: 71  LEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSS-YQLVGMLRGIAAGMKYL---SDM 126

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG--YVAPEW 668
             +H D+  +N+L     +++N   K+SDFG+S++L  D   T T   G +   + APE 
Sbjct: 127 NYVHRDLAARNIL-----VNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEA 181

Query: 669 LRNVPVTTKVDVFSFGVMLLEII 691
           +     T+  DV+SFG+++ E++
Sbjct: 182 IAYRKFTSASDVWSFGIVMWEVM 204

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  104 bits (261), Expect = 8e-25
 Identities = 67/212 (31%), Positives = 99/212 (46%), Gaps = 21/212 (9%)

Query: 493 SKLVGTGSSGKVYRGI-LRLKDTQIEIAVK--KLEKDIEKTNEEFMTELKIIGRTHHKNL 549
              +G G+ GKVY  + L   DT   +AVK  +++ +  KT +E   E+K++    H NL
Sbjct: 5   GNKIGGGTFGKVYTAVNL---DTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNL 61

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V+  G     +K  +  E    GTL   L H       V RV   L +  GL YLH    
Sbjct: 62  VKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRV-YTLQLLEGLAYLHSH-- 118

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT---NMRGTMGYVAP 666
             I+H DIKP N+      LD N + K+ DFG +  L  + T       ++ GT  Y+AP
Sbjct: 119 -GIVHRDIKPANIF-----LDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAP 172

Query: 667 EWLRNVPVTTK---VDVFSFGVMLLEIICGRR 695
           E +            D++S G ++LE+  G+R
Sbjct: 173 EVITGGKGKGHGRAADIWSLGCVVLEMATGKR 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  104 bits (262), Expect = 9e-25
 Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 40/229 (17%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGR-THHK 547
           F K++G GS   V     + K+T  E A+K L+K     EK  +    E +++ R   H 
Sbjct: 5   FGKIIGEGSFSTVVLA--KEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHP 62

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR---VEIALGVARGLLYL 604
            +++L     +E+    V E  PNG L  ++   G       R    EI L +     YL
Sbjct: 63  GIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALE----YL 118

Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ-------------- 650
           H +    IIH D+KP+N+LLD      +   KI+DFG +K+L+ +               
Sbjct: 119 HSK---GIIHRDLKPENILLD-----KDMHIKITDFGTAKVLDPNSSPESNKGDATNIDS 170

Query: 651 -----TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
                 R   +  GT  YV+PE L   P     D+++ G ++ +++ G+
Sbjct: 171 QIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK 219

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score =  104 bits (260), Expect = 1e-24
 Identities = 67/210 (31%), Positives = 112/210 (53%), Gaps = 15/210 (7%)

Query: 494 KLVGTGSSGKVYRG----ILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKN 548
             +G+G+ G+VY G    IL      I +AVK L K   ++  +EF+ E  ++   +H N
Sbjct: 1   NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPN 60

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFL----FHEGQRPGW--VQRVEIALGVARGLL 602
           +V+LLG C   + + ++ ELM  G L ++L          P     + ++I L VA+G +
Sbjct: 61  IVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCV 120

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNMRGTM 661
           YL    +   IH D+  +N L+  K  D + + KI DFG+++ + K D  R +      +
Sbjct: 121 YLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPV 177

Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            ++APE L +   TT+ DV+SFGV++ EI+
Sbjct: 178 RWMAPESLLDGKFTTQSDVWSFGVLMWEIL 207

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score =  102 bits (256), Expect = 3e-24
 Identities = 57/201 (28%), Positives = 103/201 (51%), Gaps = 13/201 (6%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
             + +G G  G+V+ G   L +    +AVK L+       ++F+ E +I+ +  H  L++
Sbjct: 10  LLRKLGAGQFGEVWEG---LWNNTTPVAVKTLKPGTMDP-KDFLAEAQIMKKLRHPKLIQ 65

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWV-QRVEIALGVARGLLYLHEECET 610
           L   C+ E+   +V ELM  G+L  +L     R   + Q +++A  VA G+ YL  +   
Sbjct: 66  LYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ--- 122

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
             IH D+  +NVL     +  N + K++DFG+++++ +D        +  + + APE   
Sbjct: 123 NYIHRDLAARNVL-----VGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAAL 177

Query: 671 NVPVTTKVDVFSFGVMLLEII 691
               + K DV+SFG++L EI+
Sbjct: 178 YNRFSIKSDVWSFGILLTEIV 198

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score =  102 bits (255), Expect = 5e-24
 Identities = 78/267 (29%), Positives = 119/267 (44%), Gaps = 41/267 (15%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKTNE--EFMTELKIIGRTHHKNLVRL 552
           +G G+ GKV   I++ +DT+   A+K + K    +       + E +I+   +H  LV L
Sbjct: 8   IGKGAFGKVC--IVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNL 65

Query: 553 -LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHE 606
              F  EE+  L+V +L+  G L   L     F E Q   W+   EI L +     YLH 
Sbjct: 66  WYSFQDEENMYLVV-DLLLGGDLRYHLSQKVKFSEEQVKFWI--CEIVLALE----YLHS 118

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
           +    IIH DIKP N+LLD +         I+DF I+  +  D   T T+  GT GY+AP
Sbjct: 119 K---GIIHRDIKPDNILLDEQG-----HVHITDFNIATKVTPDTLTTSTS--GTPGYMAP 168

Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGRR--HIELSRVEEE---SEEVDIVLS--DWVIS 719
           E L     +  VD +S GV   E + G+R        + ++    +E   VL    W   
Sbjct: 169 EVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTE 228

Query: 720 CM------LSRNLQVLVSHDPEVLSDL 740
            +      L R+ Q  +  + + L + 
Sbjct: 229 AIDAINKLLERDPQKRLGDNLKDLKNH 255

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score =  102 bits (256), Expect = 5e-24
 Identities = 64/221 (28%), Positives = 115/221 (52%), Gaps = 22/221 (9%)

Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILR--LKDTQIEIAVKKLEKDI-EKTNEEFMTELKI 540
            L+E      K++G+G+ G VY+G+     +  +I +A+K L ++   K N+E + E  +
Sbjct: 3   ILKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYV 62

Query: 541 IGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARG 600
           +    H ++VRLLG C    +  L+ +LMP G L +++ +     G    +   + +A+G
Sbjct: 63  MASVDHPHVVRLLGICLSS-QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKG 121

Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
           + YL E+   +++H D+  +NVL     + T    KI+DFG++KLL+ D    +      
Sbjct: 122 MSYLEEK---RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLDVD----EKEYHAE 169

Query: 661 MGYV-----APEWLRNVPVTTKVDVFSFGVMLLEIIC-GRR 695
            G V     A E + +   T K DV+S+GV + E++  G +
Sbjct: 170 GGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAK 210

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score =  101 bits (254), Expect = 5e-24
 Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           + +G G+ G VY+G+L+      E+AVK            +F+ E +I+ +  H N+V+L
Sbjct: 1   EKIGKGNFGDVYKGVLK---GNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKL 57

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQI 612
           +G C ++    +V EL+P G+L  FL  +  R    + ++++L  A G+ YL  +     
Sbjct: 58  IGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN---C 114

Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT-MGYVAPEWLRN 671
           IH D+  +N L+       N + KISDFG+S+            ++   + + APE L  
Sbjct: 115 IHRDLAARNCLVGE-----NNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNY 169

Query: 672 VPVTTKVDVFSFGVMLLEI 690
              T++ DV+S+G++L E 
Sbjct: 170 GRYTSESDVWSYGILLWET 188

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score =  101 bits (252), Expect = 8e-24
 Identities = 58/201 (28%), Positives = 105/201 (52%), Gaps = 16/201 (7%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
             + +G+G  G V+ G    K    ++A+K + +    + E+F+ E +++ +  H  LV+
Sbjct: 8   LVQEIGSGQFGLVWLGYWLEKR---KVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQ 63

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEECE 609
           L G C+E     LV+E M +G LS++L    QR  + Q   + + L V  G+ YL     
Sbjct: 64  LYGVCTERSPICLVFEFMEHGCLSDYL--RAQRGKFSQETLLGMCLDVCEGMAYLESSN- 120

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             +IH D+  +N L     +  N + K+SDFG+++ +  DQ  + T  +  + + +PE  
Sbjct: 121 --VIHRDLAARNCL-----VGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVF 173

Query: 670 RNVPVTTKVDVFSFGVMLLEI 690
                ++K DV+SFGV++ E+
Sbjct: 174 SFSKYSSKSDVWSFGVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score =  101 bits (252), Expect = 9e-24
 Identities = 63/199 (31%), Positives = 106/199 (53%), Gaps = 12/199 (6%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F K +GTG  G V  G  R    Q ++A+K + K+   + +EF+ E K++ +  H+ LV+
Sbjct: 8   FLKELGTGQFGVVKYGKWR---GQYDVAIKMI-KEGSMSEDEFIEEAKVMMKLSHEKLVQ 63

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L G C+++    +V E M NG L N+L   G+R    Q +E+   V  G+ YL  +   Q
Sbjct: 64  LYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---Q 120

Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
            IH D+  +N L     +D     K+SDFG+S+ +  D+  +    +  + +  PE L  
Sbjct: 121 FIHRDLAARNCL-----VDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLY 175

Query: 672 VPVTTKVDVFSFGVMLLEI 690
              ++K DV++FGV++ E+
Sbjct: 176 SKFSSKSDVWAFGVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score =  100 bits (250), Expect = 2e-23
 Identities = 82/287 (28%), Positives = 126/287 (43%), Gaps = 53/287 (18%)

Query: 497 GTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFC 556
           G G  G+V+ G         ++AVK L K    + E F+ E +I+ +  H  LV+L   C
Sbjct: 15  GAGQFGEVWMGTWN---GTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVC 70

Query: 557 SEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
           SEE+   +V E M  G+L +FL   EG++    Q V++A  +A G+ YL        IH 
Sbjct: 71  SEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHR 127

Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           D+  +N+L     +  N + KI+DFG+++L+  D+       +  + + APE       T
Sbjct: 128 DLAARNIL-----VGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFT 182

Query: 676 TKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPE 735
            K DV+SFG++L EI      +   RV                  M           + E
Sbjct: 183 IKSDVWSFGILLTEI------VTYGRVPYPG--------------M----------TNRE 212

Query: 736 VLSDLERFERMAM----------VGLWCNHPDPNLRPSMKKVIHMLE 772
           VL  +ER  RM            + L C   DP  RP+ + +   LE
Sbjct: 213 VLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLE 259

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score =  100 bits (250), Expect = 2e-23
 Identities = 75/295 (25%), Positives = 137/295 (46%), Gaps = 50/295 (16%)

Query: 496 VGTGSSGKVYRGILR---LKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           +G GS G VY G+ +     + +  +A+K + E    +   EF+ E  ++   +  ++VR
Sbjct: 14  LGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVR 73

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP-----------GWVQRVEIALGVARG 600
           LLG  S     L+V ELM  G L ++L    +RP              + +++A  +A G
Sbjct: 74  LLGVVSTGQPTLVVMELMAKGDLKSYL--RSRRPEAENNPGLGPPTLQKFIQMAAEIADG 131

Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNMRG 659
           + YL      + +H D+  +N +     +  +   KI DFG+++ + + D  R       
Sbjct: 132 MAYLA---AKKFVHRDLAARNCM-----VAEDLTVKIGDFGMTRDIYETDYYRKGGKGLL 183

Query: 660 TMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI--ICGRRHIELSRVEEESEEVDIVLSDWV 717
            + ++APE L++   TTK DV+SFGV+L E+  +  + +  LS     +EE        V
Sbjct: 184 PVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS-----NEE--------V 230

Query: 718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
           +  ++      L  + P+ L +L     M M    C   +P +RP+  +++  L+
Sbjct: 231 LKFVIDGGHLDLPENCPDKLLEL-----MRM----CWQYNPKMRPTFLEIVSSLK 276

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score =  100 bits (250), Expect = 3e-23
 Identities = 72/212 (33%), Positives = 109/212 (51%), Gaps = 24/212 (11%)

Query: 494 KLVGTGSSGKVYRGILRLKD---TQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNL 549
           + +G G+ G+VY G+ R +D    ++++AVK L E   E+   +F+ E  I+ + +H+N+
Sbjct: 12  RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNI 71

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPG------WVQRVEIALGVARGLLY 603
           VRL+G   E   R ++ ELM  G L +FL     RP           +  A  VA+G  Y
Sbjct: 72  VRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKY 131

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG--TM 661
           L E      IH DI  +N LL  K      +AKI+DFG++    +D  R     +G   M
Sbjct: 132 LEEN---HFIHRDIAARNCLLTCKGPGR--VAKIADFGMA----RDIYRASYYRKGGRAM 182

Query: 662 ---GYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
               ++ PE   +   T+K DV+SFGV+L EI
Sbjct: 183 LPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEI 214

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score =   99 bits (249), Expect = 3e-23
 Identities = 60/196 (30%), Positives = 103/196 (52%), Gaps = 12/196 (6%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 14  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 70

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRP-GWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L    ++    V  + +A  ++  + YL ++     IH
Sbjct: 71  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 127

Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L     +  N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 128 RDLAARNCL-----VGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 182

Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 183 SIKSDVWAFGVLLWEI 198

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 99.6 bits (248), Expect = 3e-23
 Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 25/217 (11%)

Query: 489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKL------EKDIEKTNEEFMTELKIIG 542
            KG  + +GTG+    Y+   R   T   +AVK++        + E+  E    E++++ 
Sbjct: 3   LKG--QQLGTGAFSSCYQA--RDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMA 58

Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIA--LGVARG 600
           R +H +++R+LG   E+    L  E M  G++S+ L   G    + + V I     + RG
Sbjct: 59  RLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRG 115

Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT---NM 657
           L YLHE    QIIH D+K  N+L+D     T    +I+DFG +  L    T        +
Sbjct: 116 LSYLHEN---QIIHRDVKGANLLID----STGQRLRIADFGAAARLAAKGTGAGEFQGQL 168

Query: 658 RGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
            GT+ ++APE LR        DV+S G +++E+   +
Sbjct: 169 LGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAK 205

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 99.3 bits (247), Expect = 4e-23
 Identities = 60/197 (30%), Positives = 112/197 (56%), Gaps = 12/197 (6%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-NEEFMTELKIIGRTHHKNLVRLLG 554
           +G+G+ G V +G+ +++  QI++A+K L+ + EK+  +E M E +I+ +  +  +VR++G
Sbjct: 3   LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIG 62

Query: 555 FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            C E +  +LV E+   G L+ FL  +         VE+   V+ G+ YL  +     +H
Sbjct: 63  VC-EAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK---NFVH 118

Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT--RTDTNMRGTMGYVAPEWLRNV 672
            D+  +NVLL    ++ +Y AKISDFG+SK L  D +  +  +  +  + + APE +   
Sbjct: 119 RDLAARNVLL----VNQHY-AKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFR 173

Query: 673 PVTTKVDVFSFGVMLLE 689
             +++ DV+S+G+ + E
Sbjct: 174 KFSSRSDVWSYGITMWE 190

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =   99 bits (250), Expect = 4e-23
 Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 34/209 (16%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFM-TELKIIGRTHHKNLVRLLG 554
           +G G+SG+VY+   R   T  E+A+KK+   + K N+E +  E+ I+    H N+V    
Sbjct: 27  IGEGASGEVYKATDR--ATGKEVAIKKM--RLRKQNKELIINEILIMKDCKHPNIVDYYD 82

Query: 555 FCSEEDKRL-LVYELMPNGTLSNFLFH------EGQRPGWVQRVEIA---LGVARGLLYL 604
                   L +V E M  G+L++ +        E Q         IA     V +GL YL
Sbjct: 83  -SYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQ---------IAYVCREVLQGLEYL 132

Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
           H      +IH DIK  N+LL       +   K++DFG +  L K++++ ++ + GT  ++
Sbjct: 133 HS---QNVIHRDIKSDNILLSK-----DGSVKLADFGFAAQLTKEKSKRNS-VVGTPYWM 183

Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           APE ++      KVD++S G+M +E+  G
Sbjct: 184 APEVIKRKDYGPKVDIWSLGIMCIEMAEG 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 99.1 bits (247), Expect = 5e-23
 Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 24/209 (11%)

Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLG 554
           ++G G+ G VY    R   TQ+ IA+K++ +   +  +    E+ +     H+N+V+ LG
Sbjct: 15  VLGKGTYGIVYAA--RDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLG 72

Query: 555 FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGW--VQRVEIALG-----VARGLLYLHEE 607
             SE     +  E +P G+LS  L     R  W  ++  E  +      +  GL YLH+ 
Sbjct: 73  SDSENGFFKIFMEQVPGGSLSALL-----RSKWGPLKDNEQTIIFYTKQILEGLKYLHDN 127

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              QI+H DIK  NVL++  +     + KISDFG SK L      T+T   GT+ Y+APE
Sbjct: 128 ---QIVHRDIKGDNVLVNTYS----GVVKISDFGTSKRLAGINPCTET-FTGTLQYMAPE 179

Query: 668 WLRNVP--VTTKVDVFSFGVMLLEIICGR 694
            +   P       D++S G  ++E+  G+
Sbjct: 180 VIDKGPRGYGAPADIWSLGCTIVEMATGK 208

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 98.5 bits (246), Expect = 7e-23
 Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 13/199 (6%)

Query: 497 GTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           G G+SG V +  +  + T   +AVK +  +I E   ++ + EL I+ + +   +V   G 
Sbjct: 10  GAGNSGVVSK--VLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGA 67

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
                   +  E M  G+L   L     R       +IA+ V +GL YLHE+   +IIH 
Sbjct: 68  FYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEK--HKIIHR 125

Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           D+KP N+L++ +        K+ DFG+S  L     +T     GT  Y+APE ++    +
Sbjct: 126 DVKPSNILVNSRG-----QIKLCDFGVSGQLVNSLAKTFV---GTSSYMAPERIQGNDYS 177

Query: 676 TKVDVFSFGVMLLEIICGR 694
            K D++S G+ L+E+  GR
Sbjct: 178 VKSDIWSLGLSLIELATGR 196

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 98.3 bits (245), Expect = 9e-23
 Identities = 79/285 (27%), Positives = 128/285 (44%), Gaps = 49/285 (17%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKK--LEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           K +G GS G VY+ + RL D Q   A+K+  L    +K  E+ + E++I+   +H N++ 
Sbjct: 6   KKLGKGSYGSVYK-VKRLSDNQ-FYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIIS 63

Query: 552 -----LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEI---ALGVARGLLY 603
                L G     +K  +V E  P G LS  +    ++   +   EI    + + RGL  
Sbjct: 64  YKEAFLDG-----NKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQA 118

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           LHE+   +I+H D+K  N+LL       N + KI D GISK+L K+  +T     GT  Y
Sbjct: 119 LHEQ---KILHRDLKSANILLV-----ANDLVKIGDLGISKVLKKNMAKTQI---GTPHY 167

Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS 723
           +APE  +  P + K D++S G +L E+       E   +++   +V        I  + S
Sbjct: 168 MAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYP-PIPPIYS 226

Query: 724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI 768
           ++LQ  +                           P LRP+  K++
Sbjct: 227 QDLQNFIR--------------------SMLQVKPKLRPNCDKIL 251

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 98.3 bits (245), Expect = 1e-22
 Identities = 84/313 (26%), Positives = 136/313 (43%), Gaps = 58/313 (18%)

Query: 484 ELQEATKGFSKLVGTGSSGKVYRG---ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELK 539
            +Q  T    + +G G+ GKV+ G    L  ++ +  +AVK L E       ++F  E +
Sbjct: 1   HVQRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAE 60

Query: 540 IIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEG-------------QRPG 586
           ++    H+N+V+  G C+E D  ++V+E M +G L+ FL   G                 
Sbjct: 61  LLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELT 120

Query: 587 WVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL 646
             Q ++IA+ +A G++YL  +     +H D+  +N L     +  + + KI DFG+S   
Sbjct: 121 LSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCL-----VGYDLVVKIGDFGMS--- 169

Query: 647 NKDQTRTDTNMRG--TM---GYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRR-HIEL 699
            +D   TD    G  TM    ++ PE +     TT+ DV+SFGV+L EI   G++    L
Sbjct: 170 -RDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGL 228

Query: 700 SRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPN 759
           S  E             VI C+    L       P             M+G W    DP 
Sbjct: 229 SNEE-------------VIECITQGRLL----QRPR---TCPSEVYDIMLGCW--KRDPQ 266

Query: 760 LRPSMKKVIHMLE 772
            R ++K +   L+
Sbjct: 267 QRINIKDIHERLQ 279

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 97.6 bits (243), Expect = 2e-22
 Identities = 63/207 (30%), Positives = 115/207 (55%), Gaps = 20/207 (9%)

Query: 494 KLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVR 551
           +++G G  G+V RG L+L    +I +A+K L+    EK   +F++E  I+G+  H N++ 
Sbjct: 10  EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIH 69

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           L G  ++    +++ E M NG L +FL  ++GQ    +Q V +  G+A G+ YL    E 
Sbjct: 70  LEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTV-IQLVGMLRGIAAGMKYL---SEM 125

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG------YV 664
             +H D+  +N+L     +++N + K+SDFG+S+ L  D   +D     ++G      + 
Sbjct: 126 NYVHRDLAARNIL-----VNSNLVCKVSDFGLSRFLEDD--TSDPTYTSSLGGKIPIRWT 178

Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           APE +     T+  DV+S+G+++ E++
Sbjct: 179 APEAIAYRKFTSASDVWSYGIVMWEVM 205

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 97.0 bits (241), Expect = 2e-22
 Identities = 72/229 (31%), Positives = 125/229 (54%), Gaps = 23/229 (10%)

Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
            LQ+ T G  +++G G  G V +G    + T  ++AVK ++ D+  T + F+ E  ++ +
Sbjct: 4   NLQKLTLG--EIIGEGEFGAVLQG----EYTGQKVAVKNIKCDV--TAQAFLEETAVMTK 55

Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP-GWVQRVEIALGVARGLL 602
            HHKNLVRLLG        + V ELM  G L NFL   G+     +Q ++ +L VA G+ 
Sbjct: 56  LHHKNLVRLLGVILHNGLYI-VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGME 114

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           YL  +   +++H D+  +N+L+       + +AK+SDFG++++     +    N +  + 
Sbjct: 115 YLESK---KLVHRDLAARNILVS-----EDGVAKVSDFGLARV----GSMGVDNSKLPVK 162

Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVD 710
           + APE L++   ++K DV+S+GV+L E+   GR       ++E  E V+
Sbjct: 163 WTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVE 211

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 97.9 bits (244), Expect = 2e-22
 Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 39/297 (13%)

Query: 492 FSKLVGTGSSGKVYRGILR-LKDTQIE-IAVKKLEKDIEKTN-EEFMTELKIIGRTHHKN 548
           F K +G G  GKV       L D   E +AVK L    E+ +  +F  E++I+    H+N
Sbjct: 8   FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHEN 67

Query: 549 LVRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE 606
           +V+  G C +   R   L+ E +P+G+L ++L     +    + +  +  + +G+ YL  
Sbjct: 68  IVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGS 127

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT--MGYV 664
           +   + IH D+  +N+L++     +  + KISDFG++K+L +D+        G   + + 
Sbjct: 128 Q---RYIHRDLAARNILVE-----SEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWY 179

Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR 724
           APE LR    ++  DV+SFGV L E+         +  +         L       +   
Sbjct: 180 APECLRTSKFSSASDVWSFGVTLYEL--------FTYGDPSQSPPAEFL-----RMIGIA 226

Query: 725 NLQVLVSHDPEVLSDLERFER---------MAMVGLWCNHPDPNLRPSMKKVIHMLE 772
             Q++V+   E+L + ER  R           M   W    +P  RPS   +I +++
Sbjct: 227 QGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCW--EAEPQDRPSFADLILIVD 281

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score =  102 bits (255), Expect = 4e-22
 Identities = 78/262 (29%), Positives = 119/262 (45%), Gaps = 28/262 (10%)

Query: 513 DTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL-VYEL 568
            T  E+A+K L  D    E     F  E  +  R +H N+V LL         L  V+E 
Sbjct: 1   MTGHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAPPGLLFAVFEY 60

Query: 569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKT 628
           +P  TL   L  +G  P   +   + L V   L   H +    I+H D+KPQN+++    
Sbjct: 61  VPGRTLREVLAADGALPA-GETGRLMLQVLDALACAHNQ---GIVHRDLKPQNIMVSQTG 116

Query: 629 LDTNYMAKISDFGISKLL----NKDQTRT--DTNMRGTMGYVAPEWLRNVPVTTKVDVFS 682
           +  +  AK+ DFGI  LL    + D       T + GT  Y APE LR  PVT   D+++
Sbjct: 117 VRPH--AKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYA 174

Query: 683 FGVMLLEIICGRRHIELSRVEE----ESEEVDIVLSDWVISCMLSRNLQVLVSHDPE--V 736
           +G++ LE + G+R ++ + V E    +   VD+ L  W+    L + L+  ++ DP    
Sbjct: 175 WGLIFLECLTGQRVVQGASVAEILYQQLSPVDVSLPPWIAGHPLGQVLRKALNKDPRQRA 234

Query: 737 LSDLERFERM------AMVGLW 752
            S     ER       A+VG+ 
Sbjct: 235 ASAPALAERFRALELCALVGIL 256

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 95.6 bits (238), Expect = 6e-22
 Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 12/199 (6%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F K +G+G  G V+ G  R    +I++A+K + ++   + ++F+ E K++ +  H NLV+
Sbjct: 8   FLKELGSGQFGVVHLGKWR---GKIDVAIKMI-REGAMSEDDFIEEAKVMMKLSHPNLVQ 63

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L G C+++    +V E M NG L N+L     + G    +++   V   + YL       
Sbjct: 64  LYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG--- 120

Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
            IH D+  +N L     +  + + K+SDFG+++ +  DQ  +    +  + +  PE    
Sbjct: 121 FIHRDLAARNCL-----VGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDY 175

Query: 672 VPVTTKVDVFSFGVMLLEI 690
              ++K DV+SFGV++ E+
Sbjct: 176 SRFSSKSDVWSFGVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 95.6 bits (238), Expect = 8e-22
 Identities = 86/286 (30%), Positives = 139/286 (48%), Gaps = 36/286 (12%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQ-IEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKNLV 550
           +++G G  G VY G L   D Q I  AVK L +  D+E+  E+F+ E  I+    H N++
Sbjct: 1   RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEV-EQFLKEGIIMKDFSHPNVL 59

Query: 551 RLLGFC-SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
            LLG C   E   L+V   M +G L NF+  E   P     +   L VA+G+ YL  +  
Sbjct: 60  SLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK-- 117

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNKD--QTRTDTNMRGTMGYVAP 666
            + +H D+  +N +LD      ++  K++DFG+++ + +K+       T  +  + ++A 
Sbjct: 118 -KFVHRDLAARNCMLD-----ESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMAL 171

Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL 726
           E L+    TTK DV+SFGV+L E+        ++R      +VD    D  +  +  R L
Sbjct: 172 ESLQTQKFTTKSDVWSFGVLLWEL--------MTRGAPPYPDVDSF--DITVYLLQGRRL 221

Query: 727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
                  PE   D   +E M    L C HP P +RP+  +++  +E
Sbjct: 222 L-----QPEYCPD-PLYEVM----LSCWHPKPEMRPTFSELVSRIE 257

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 95.4 bits (237), Expect = 1e-21
 Identities = 64/203 (31%), Positives = 113/203 (55%), Gaps = 14/203 (6%)

Query: 494 KLVGTGSSGKVYRGILRLKDT-QIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVR 551
           K++G G  G+V  G L+L    +I +A+K L+    EK   +F++E  I+G+  H N++ 
Sbjct: 10  KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIH 69

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLF-HEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           L G  ++    ++V E M NG+L  FL  H+GQ    +Q V +  G+A G+ YL    + 
Sbjct: 70  LEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFT-VIQLVGMLRGIASGMKYL---SDM 125

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG--YVAPEW 668
             +H D+  +N+L     +++N + K+SDFG+S++L  D     T   G +   + APE 
Sbjct: 126 GYVHRDLAARNIL-----VNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEA 180

Query: 669 LRNVPVTTKVDVFSFGVMLLEII 691
           +     T+  DV+S+G+++ E++
Sbjct: 181 IAYRKFTSASDVWSYGIVMWEVM 203

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 94.9 bits (237), Expect = 2e-21
 Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 24/208 (11%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IE-KTNEEFMTELKIIGRTHHKN 548
           F K +GTGS G+V   ++R K +    A+K L K   ++ K  E  + E +I+    H  
Sbjct: 5   FIKTLGTGSFGRVM--LVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPF 62

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV---EIALGVARGLLYLH 605
           LV L G   ++    LV E +P G L + L   G+ P  V R    ++ L     L YLH
Sbjct: 63  LVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLA----LEYLH 118

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                 I++ D+KP+N+LLD       Y+ KI+DFG +K +   + RT T + GT  Y+A
Sbjct: 119 SL---DIVYRDLKPENLLLD----SDGYI-KITDFGFAKRV---KGRTYT-LCGTPEYLA 166

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           PE + +      VD ++ G+++ E++ G
Sbjct: 167 PEIILSKGYGKAVDWWALGILIYEMLAG 194

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 94.3 bits (234), Expect = 2e-21
 Identities = 64/201 (31%), Positives = 109/201 (54%), Gaps = 20/201 (9%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVK--KLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +G+G+ G V +G+ ++K ++  +AVK  K + +     +E + E  ++ +  +  +VR++
Sbjct: 3   LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMI 62

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR---VEIALGVARGLLYLHEECET 610
           G C E +  +LV EL   G L+ FL    Q+   V      E+   V+ G+ YL E   T
Sbjct: 63  GIC-EAESWMLVMELAELGPLNKFL----QKNKHVTEKNITELVHQVSMGMKYLEE---T 114

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT--RTDTNMRGTMGYVAPEW 668
             +H D+  +NVLL      T + AKISDFG+SK L  D+   +  T+ +  + + APE 
Sbjct: 115 NFVHRDLAARNVLLV-----TQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPEC 169

Query: 669 LRNVPVTTKVDVFSFGVMLLE 689
           +     ++K DV+SFGV++ E
Sbjct: 170 MNYYKFSSKSDVWSFGVLMWE 190

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 94.0 bits (234), Expect = 4e-21
 Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 37/223 (16%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQ---IEIAVKKLEKD-IEKTNEEFMTEL---KIIGRTHH 546
           K +G G+ G+V +      D       +AVK L+ D  EK   + ++E+   K+IG+  H
Sbjct: 18  KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK--H 75

Query: 547 KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP-----------------GWVQ 589
           KN++ LLG C++E    +V E   +G L +FL    +RP                     
Sbjct: 76  KNIINLLGVCTQEGPLYVVVEYAAHGNLRDFL--RARRPPGEYASPDDPRPPEETLTQKD 133

Query: 590 RVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNK 648
            V  A  VARG+ +L  +   + IH D+  +NVL+       +++ KI+DFG+++ + + 
Sbjct: 134 LVSFAYQVARGMEFLASK---KCIHRDLAARNVLVT-----EDHVMKIADFGLARDIHHI 185

Query: 649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           D  R  TN R  + ++APE L +   T + DV+SFGV+L EI 
Sbjct: 186 DYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIF 228

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin

 Score = 87.8 bits (218), Expect = 8e-21
 Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 10/104 (9%)

Query: 72  EKTLVWAADRDSPAEAGS-KITLTNDGKLLLTYFNGSVQQIYS------GAASLALMQND 124
            +T+VW A+R +P    S  + L +DG L+L  ++G+ + ++S      G+  +A++Q+D
Sbjct: 1   NQTVVWVANRLNPLTDSSYTLILQSDGNLVL--YDGNGRVVWSSNTSGKGSGCVAVLQDD 58

Query: 125 GNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTA 168
           GN VL + +  V+W SFD PTDT+LPGQ       +  + R T+
Sbjct: 59  GNLVLYDNSGKVLWQSFDHPTDTLLPGQK-DGNVVIGGSRRLTS 101

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 91.2 bits (226), Expect = 2e-20
 Identities = 60/198 (30%), Positives = 110/198 (55%), Gaps = 14/198 (7%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRL 552
           +L+G G+ G+V++G L+ K     +AVK  ++D+ ++   +F++E +I+ +  H N+V+L
Sbjct: 1   ELLGKGNFGEVFKGTLKDKTP---VAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKL 57

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQI 612
           +G C++     +V EL+P G   +FL  +       Q V+ AL  A G+ YL  +     
Sbjct: 58  IGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESK---NC 114

Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT-MGYVAPEWLRN 671
           IH D+  +N L     +  N + KISDFG+S+    D   + + ++   + + APE L  
Sbjct: 115 IHRDLAARNCL-----VGENNVLKISDFGMSR-QEDDGIYSSSGLKQIPIKWTAPEALNY 168

Query: 672 VPVTTKVDVFSFGVMLLE 689
              +++ DV+S+G++L E
Sbjct: 169 GRYSSESDVWSYGILLWE 186

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 91.7 bits (228), Expect = 3e-20
 Identities = 68/209 (32%), Positives = 98/209 (46%), Gaps = 29/209 (13%)

Query: 497 GTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT----ELKIIGRTHHKNLVRL 552
           G G+ G V +   RLK+T +  A+K +  D    N +       EL+I        +V+ 
Sbjct: 10  GEGAGGSVTK--CRLKNTGMIFALKTITTD---PNPDLQKQILRELEINKSCKSPYIVKY 64

Query: 553 LG-FCSEEDKRL-LVYELMPNGTLSNF---LFHEGQRPGWVQRV--EIALGVARGLLYLH 605
            G F  E    + +  E    G+L +    +   G R G  ++V  +IA  V +GL YLH
Sbjct: 65  YGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIG--EKVLGKIAESVLKGLSYLH 122

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                +IIH DIKP N+LL  K        K+ DFG+S  L      T T   GT  Y+A
Sbjct: 123 SR---KIIHRDIKPSNILLTRKG-----QVKLCDFGVSGELVNSLAGTFT---GTSFYMA 171

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           PE ++  P +   DV+S G+ LLE+   R
Sbjct: 172 PERIQGKPYSITSDVWSLGLTLLEVAQNR 200

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 90.4 bits (224), Expect = 3e-20
 Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 22/210 (10%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           K +G GS GK+Y    +       I    L K   K  E    E+ ++ +  H N+V   
Sbjct: 6   KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFF 65

Query: 554 GFCSEEDKRLLVYELMPNGTL-------SNFLFHEGQRPGWVQRVEIALGVARGLLYLHE 606
               E  +  +V E    G L          LF E Q   W   V+I+L    GL ++H+
Sbjct: 66  ASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWF--VQISL----GLKHIHD 119

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
               +I+H DIK QN+ L         +AK+ DFGI++ LN D         GT  Y++P
Sbjct: 120 R---KILHRDIKSQNIFLS----KNGMVAKLGDFGIARQLN-DSMELAYTCVGTPYYLSP 171

Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGRRH 696
           E  +N P   K D++S G +L E +C  +H
Sbjct: 172 EICQNRPYNNKTDIWSLGCVLYE-LCTLKH 200

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 91.1 bits (227), Expect = 4e-20
 Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 24/208 (11%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF----MTELKIIGRTHHKNLVR 551
           +G G+ G+VY+   R K T   +A+KK+  + EK  E F    + E+K++ +  H N+VR
Sbjct: 7   IGEGTYGQVYKA--RNKKTGELVALKKIRMENEK--EGFPITAIREIKLLQKLRHPNIVR 62

Query: 552 LLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           L    + + K    +V+E M +  L+  L     +    Q       +  GL YLH    
Sbjct: 63  LKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN-- 119

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I+H DIK  N+L++      + + K++DFG+++   K  +   TN   T+ Y  PE L
Sbjct: 120 -GILHRDIKGSNILIN-----NDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELL 173

Query: 670 ---RNVPVTTKVDVFSFGVMLLEIICGR 694
                     +VD++S G +L E+  G+
Sbjct: 174 LGATR--YGPEVDMWSVGCILAELFLGK 199

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 89.8 bits (223), Expect = 9e-20
 Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 28/219 (12%)

Query: 492 FSKLVGTGSSGKVYRGILRLK---DTQIEIAVKKLEKDIE-KTNEEFMTELKIIGRTHHK 547
           F + +G G+ GKVY+G L       +   +A+K L+++ E K  +EF  E +++    H 
Sbjct: 9   FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHP 68

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF----HEGQRPGWVQR-----------VE 592
           N+V LLG C++E    +++E + +G L  FL     H                     + 
Sbjct: 69  NIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLH 128

Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL-NKDQT 651
           IA+ +A G+ YL        +H D+  +N L+           KISDFG+S+ + + D  
Sbjct: 129 IAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEG-----LTVKISDFGLSRDIYSADYY 180

Query: 652 RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
           R  +     + ++ PE +     TT+ D++SFGV+L EI
Sbjct: 181 RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 90.1 bits (223), Expect = 1e-19
 Identities = 66/211 (31%), Positives = 116/211 (54%), Gaps = 13/211 (6%)

Query: 485 LQEATKGFSKLVGTGSSGKVYRGIL--RLKDTQIEIAVKKL-EKDIEKTNEEFMTELKII 541
           L+E      K++G+G+ G VY+GI     +  +I +A+K L E    K N EFM E  I+
Sbjct: 4   LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 63

Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
               H +LVRLLG C     + LV +LMP+G L +++       G    +   + +A+G+
Sbjct: 64  ASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGM 122

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGT 660
           +YL E    +++H D+  +NVL+       N++ KI+DFG+++LL  D+   + +  +  
Sbjct: 123 MYLEER---RLVHRDLAARNVLVK----SPNHV-KITDFGLARLLEGDEKEYNADGGKMP 174

Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++A E +     T + DV+S+GV + E++
Sbjct: 175 IKWMALECIHYRKFTHQSDVWSYGVTIWELM 205

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 90.1 bits (223), Expect = 1e-19
 Identities = 66/232 (28%), Positives = 114/232 (49%), Gaps = 37/232 (15%)

Query: 482 FQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNE-EFMTELKI 540
           +  L+     F  ++G G+ G+V +  ++    +++ A+K++++   K +  +F  EL++
Sbjct: 1   YPVLEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 60

Query: 541 IGRT-HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-----------FHEGQRPGWV 588
           + +  HH N++ LLG C       L  E  P+G L +FL           F         
Sbjct: 61  LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 120

Query: 589 ----QRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK 644
               Q +  A  VARG+ YL ++   Q IH D+  +N+L     +  NY+AKI+DFG+S+
Sbjct: 121 LSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNIL-----VGENYVAKIADFGLSR 172

Query: 645 LLNKDQTRTDTNMRGTMGYVAPEWLR----NVPV-TTKVDVFSFGVMLLEII 691
                    +  ++ TMG +   W+     N  V TT  DV+S+GV+L EI+
Sbjct: 173 -------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 217

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 88.6 bits (220), Expect = 2e-19
 Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 14/202 (6%)

Query: 494 KLVGTGSSGKVYRGI-LRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVR 551
           K +G GS G V RG         I +AVK L+ D +    ++F+ E  I+    H+NL+R
Sbjct: 1   KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIR 60

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV-EIALGVARGLLYLHEECET 610
           L G        ++V EL P G+L + L  +      +  + + A+ +A G+ YL  +   
Sbjct: 61  LYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK--- 116

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPEW 668
           + IH D+  +N+LL           KI DFG+ + L  N+D    + +++    + APE 
Sbjct: 117 RFIHRDLAARNILLASDDK-----VKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPES 171

Query: 669 LRNVPVTTKVDVFSFGVMLLEI 690
           LR    +   DV+ FGV L E+
Sbjct: 172 LRTRTFSHASDVWMFGVTLWEM 193

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 89.1 bits (222), Expect = 2e-19
 Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 25/212 (11%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF----MTELKIIGRTH 545
           + KL  +G G+ G VY+   R K T   +A+KK+   ++   E      + E+ ++    
Sbjct: 1   YEKLEKLGEGTYGVVYKA--RDKKTGEIVALKKIR--LDNEEEGIPSTALREISLLKELK 56

Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL--FHEGQRPGWVQRVEIALGVARGLLY 603
           H N+V+LL     E K  LV+E      L  +L        P  ++   I   + RGL Y
Sbjct: 57  HPNIVKLLDVIHTERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKS--IMYQLLRGLAY 113

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
            H     +I+H D+KPQN+L     ++ + + K++DFG+++       RT T+   T+ Y
Sbjct: 114 CHSH---RILHRDLKPQNIL-----INRDGVLKLADFGLARAFGIP-LRTYTHEVVTLWY 164

Query: 664 VAPEWLRNVPV-TTKVDVFSFGVMLLEIICGR 694
            APE L      +T VD++S G +  E+I G+
Sbjct: 165 RAPEILLGSKHYSTAVDIWSVGCIFAEMITGK 196

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 88.3 bits (219), Expect = 3e-19
 Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 30/206 (14%)

Query: 497 GTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFC 556
           G G+ GKVY+   + K+T +  A K ++ + E+  E+FM E+ I+    H N+V L    
Sbjct: 14  GDGAFGKVYKA--QHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAY 71

Query: 557 SEEDKRLLVYELMPNGTLSNFL------FHEGQ-RPGWVQRVEIALGVARGLLYLHEECE 609
             E+K  ++ E    G L + +        E Q R        +   +   L +LH    
Sbjct: 72  FYENKLWILIEFCDGGALDSIMLELERGLTEPQIRY-------VCRQMLEALNFLHSH-- 122

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
            ++IH D+K  N+LL   TLD +   K++DFG+S        + DT + GT  ++APE +
Sbjct: 123 -KVIHRDLKAGNILL---TLDGD--VKLADFGVSAKNKSTLQKRDTFI-GTPYWMAPEVV 175

Query: 670 -----RNVPVTTKVDVFSFGVMLLEI 690
                ++ P   K D++S G+ L+E+
Sbjct: 176 ACETFKDNPYDYKADIWSLGITLIEL 201

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 87.9 bits (218), Expect = 4e-19
 Identities = 69/225 (30%), Positives = 115/225 (51%), Gaps = 44/225 (19%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIE-IAVKKLE----------KDIEKTNEEFMTELKIIG 542
           +L+G G+ G+VY   L L  T  E +AVK++E             +   +   +E++ + 
Sbjct: 7   ELIGKGTYGRVY---LALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLK 63

Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL------G 596
              H N+V+ LGF + E+   +  E +P G++ + L    +  G   R E  L       
Sbjct: 64  DLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCL----RTYG---RFEEQLVRFFTEQ 116

Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK----LLNKDQTR 652
           V  GL YLH +    I+H D+K  N+L+D   +      KISDFGISK    + + DQ  
Sbjct: 117 VLEGLAYLHSK---GILHRDLKADNLLVDADGI-----CKISDFGISKKSDDIYDNDQ-- 166

Query: 653 TDTNMRGTMGYVAPEWLRN--VPVTTKVDVFSFGVMLLEIICGRR 695
            + +M+G++ ++APE + +     + KVD++S G ++LE+  GRR
Sbjct: 167 -NMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRR 210

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 86.1 bits (214), Expect = 1e-18
 Identities = 65/207 (31%), Positives = 106/207 (51%), Gaps = 25/207 (12%)

Query: 499 GSSGKVYRGILRLKDTQIEIAVKKLEKD--IEK-TNEEFMTELKIIGRTHHKNLVRLLGF 555
           G+ G+V+  + + K T    A+K ++K   I K   ++ +TE  I+ +     +V+L  +
Sbjct: 4   GAYGRVF--LAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKL--Y 59

Query: 556 CSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
            S + K+   LV E +P G L++ L + G     V R+ IA  V   L YLH      II
Sbjct: 60  YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVL-ALEYLHS---NGII 115

Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKL-LNKDQTRTDTNMR------GTMGYVAP 666
           H D+KP N+L+D     +N   K++DFG+SK+ L + Q   + + +      GT  Y+AP
Sbjct: 116 HRDLKPDNILID-----SNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAP 170

Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICG 693
           E +     +  VD +S G +L E + G
Sbjct: 171 EVILGQGHSKTVDWWSLGCILYEFLVG 197

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 86.2 bits (213), Expect = 1e-18
 Identities = 66/218 (30%), Positives = 105/218 (48%), Gaps = 30/218 (13%)

Query: 475 INFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF 534
           +N +E    +           +G G  G V  G  R      ++AVK ++ D   T + F
Sbjct: 3   LNMKELKLLQT----------IGKGEFGDVMLGDYRGN----KVAVKCIKND--ATAQAF 46

Query: 535 MTELKIIGRTHHKNLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRP-GWVQRVE 592
           + E  ++ +  H NLV+LLG   EE   L +V E M  G+L ++L   G+   G    ++
Sbjct: 47  LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 106

Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
            +L V   + YL        +H D+  +NVL+       + +AK+SDFG    L K+ + 
Sbjct: 107 FSLDVCEAMEYLEA---NNFVHRDLAARNVLVS-----EDNVAKVSDFG----LTKEASS 154

Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
           T    +  + + APE LR    +TK DV+SFG++L EI
Sbjct: 155 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 86.0 bits (213), Expect = 2e-18
 Identities = 61/198 (30%), Positives = 104/198 (52%), Gaps = 13/198 (6%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS+G V   I   K T  ++AVKK++   ++  E    E+ I+    H N+V +   
Sbjct: 27  IGEGSTGIVC--IATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSS 84

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               D+  +V E +  G L++ + H   R    Q   + L V + L +LH +    +IH 
Sbjct: 85  YLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQ---GVIHR 139

Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  ++LL   T D     K+SDFG    ++K+  R  + + GT  ++APE +  +P  
Sbjct: 140 DIKSDSILL---TSDGR--VKLSDFGFCAQVSKEVPRRKS-LVGTPYWMAPEVISRLPYG 193

Query: 676 TKVDVFSFGVMLLEIICG 693
           T+VD++S G+M++E++ G
Sbjct: 194 TEVDIWSLGIMVIEMVDG 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 86.0 bits (213), Expect = 2e-18
 Identities = 71/227 (31%), Positives = 107/227 (47%), Gaps = 17/227 (7%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMT--ELKIIGRTHHKNLVRL 552
           +G G  G+V     ++K T    A KKL+K  ++K   E M   E KI+ +   + +V L
Sbjct: 1   LGKGGFGEVCA--CQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSL 58

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEI-ALGVARGLLYLHEECETQ 611
                 +D   LV  LM  G L   +++ G+      R    A  +  GL +LH+    +
Sbjct: 59  AYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---R 115

Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           I++ D+KP+NVLLD    D   + +ISD G++  L K   +      GT GY+APE L+ 
Sbjct: 116 IVYRDLKPENVLLD----DHGNV-RISDLGLAVEL-KGGKKI-KGRAGTPGYMAPEVLQG 168

Query: 672 VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVD-IVLSDWV 717
                 VD F+ G  L E+I GR      + + E EE+    L   V
Sbjct: 169 EVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAV 215

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 85.5 bits (211), Expect = 2e-18
 Identities = 58/207 (28%), Positives = 106/207 (51%), Gaps = 14/207 (6%)

Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           +E+ K   KL G G  G+V+ G     +   ++AVK L K    + + F+ E  ++    
Sbjct: 5   RESIKLVKKL-GAGQFGEVWMGYY---NNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQ 59

Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLLYL 604
           H  LVRL    ++E+   ++ E M  G+L +FL   EG +    + ++ +  +A G+ Y+
Sbjct: 60  HDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI 119

Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
             +     IH D++  NVL+       + M KI+DFG+++++  ++       +  + + 
Sbjct: 120 ERK---NYIHRDLRAANVLVS-----ESLMCKIADFGLARVIEDNEYTAREGAKFPIKWT 171

Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           APE +     T K DV+SFG++L EI+
Sbjct: 172 APEAINFGSFTIKSDVWSFGILLYEIV 198

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 86.2 bits (213), Expect = 2e-18
 Identities = 62/198 (31%), Positives = 106/198 (53%), Gaps = 13/198 (6%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS+G V   I   K T  ++AVKK++   ++  E    E+ I+   HH+N+V +   
Sbjct: 30  IGEGSTGIVC--IATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNS 87

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               D+  +V E +  G L++ + H   R    Q   + L V R L YLH +    +IH 
Sbjct: 88  YLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQ---GVIHR 142

Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  ++LL      ++   K+SDFG    ++K+  +  + + GT  ++APE +  +P  
Sbjct: 143 DIKSDSILLT-----SDGRIKLSDFGFCAQVSKEVPKRKS-LVGTPYWMAPEVISRLPYG 196

Query: 676 TKVDVFSFGVMLLEIICG 693
           T+VD++S G+M++E+I G
Sbjct: 197 TEVDIWSLGIMVIEMIDG 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 85.1 bits (210), Expect = 2e-18
 Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 12/196 (6%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE-KTNEEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G+V+ G LR  +T +  AVK   + +      +F+ E +I+ +  H N+VRL+G
Sbjct: 3   IGRGNFGEVFSGRLRADNTPV--AVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 60

Query: 555 FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            C+++    +V EL+  G    FL  EG R    + +++    A G+ YL  +     IH
Sbjct: 61  VCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH---CIH 117

Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT-MGYVAPEWLRNVP 673
            D+  +N L+  K      + KISDFG+S+        +   M+   + + APE L    
Sbjct: 118 RDLAARNCLVTEKN-----VLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGR 172

Query: 674 VTTKVDVFSFGVMLLE 689
            +++ DV+SFG++L E
Sbjct: 173 YSSESDVWSFGILLWE 188

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 84.9 bits (210), Expect = 3e-18
 Identities = 72/284 (25%), Positives = 134/284 (47%), Gaps = 40/284 (14%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F K +G+G  G V+ G  R    QI++A+K + +    + E+F+ E K++ +  H  LV+
Sbjct: 8   FMKELGSGQFGVVHLGKWR---AQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQ 63

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR---VEIALGVARGLLYLHEEC 608
           L G C+++    +V E M NG L N+L    QR G + +   + +   V  G+ YL    
Sbjct: 64  LYGVCTQQKPLYIVTEFMENGCLLNYL---RQRQGKLSKDMLLSMCQDVCEGMEYLE--- 117

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
               IH D+  +N L     + +  + K+SDFG+++ +  D+  + +  +  + +  PE 
Sbjct: 118 RNSFIHRDLAARNCL-----VSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEV 172

Query: 669 LRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ 727
                 ++K DV+SFGV++ E+   G+   E               S++ +  M+SR  +
Sbjct: 173 FNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKK-------------SNYEVVEMISRGFR 219

Query: 728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML 771
           +        L+ +  +E M      C H  P  RP+  +++  +
Sbjct: 220 LYRPK----LASMTVYEVMYS----CWHEKPEGRPTFAELLRAI 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 84.9 bits (210), Expect = 4e-18
 Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 21/212 (9%)

Query: 495 LVGTGSSGKVYRG-------ILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHK 547
           L+G+GS G VY G       ++ +K  ++       +       +    E+ ++    H+
Sbjct: 7   LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHE 66

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           N+V+ LG   + D   +  E +P G+++  L + G     + R      + +GL YLH  
Sbjct: 67  NIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVR-NFVRQILKGLNYLHNR 125

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-----MRGTMG 662
               IIH DIK  N+L+D K        KISDFGISK L  +   T TN     ++G++ 
Sbjct: 126 ---GIIHRDIKGANILVDNKG-----GIKISDFGISKKLEANSLSTKTNGARPSLQGSVF 177

Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           ++APE ++    T K D++S G +++E++ G+
Sbjct: 178 WMAPEVVKQTSYTRKADIWSLGCLVVEMLTGK 209

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 85.1 bits (210), Expect = 5e-18
 Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 37/222 (16%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRT-HHKNL 549
           F  ++G G+ G+V R +++    ++  A+K L E   E  + +F  EL+++ +  HH N+
Sbjct: 6   FEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNI 65

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHE---GQRPGWV------------QRVEIA 594
           + LLG C       +  E  P G L +FL         P +             Q ++ A
Sbjct: 66  INLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFA 125

Query: 595 LGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD 654
             VA G+ YL E+   Q IH D+  +NVL+       N  +KI+DFG+S+         +
Sbjct: 126 SDVATGMQYLSEK---QFIHRDLAARNVLVG-----ENLASKIADFGLSR-------GEE 170

Query: 655 TNMRGTMGYVAPEWLR----NVPV-TTKVDVFSFGVMLLEII 691
             ++ TMG +   W+     N  V TTK DV+SFGV+L EI+
Sbjct: 171 VYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIV 212

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 84.1 bits (208), Expect = 5e-18
 Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 14/208 (6%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKL--EKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           ++VG G+ G V+  + R K  Q  + +K++  E+  +        E +++    H N++ 
Sbjct: 6   RVVGRGAFGIVH--LCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIE 63

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
                 E+   ++V E  P GTL+ ++  + +    +    I     + LL LH      
Sbjct: 64  YYENFLEDKALMIVMEYAPGGTLAEYI--QKRCNSLLDEDTILHFFVQILLALHHVHTKL 121

Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL-NKDQTRTDTNMRGTMGYVAPEWLR 670
           I+H D+K QN+LLD   +    + KI DFGISK+L +K +  T   + GT  Y++PE   
Sbjct: 122 ILHRDLKTQNILLDKHKM----VVKIGDFGISKILSSKSKAYT---VVGTPCYISPELCE 174

Query: 671 NVPVTTKVDVFSFGVMLLEIICGRRHIE 698
             P   K D+++ G +L E+   +R  E
Sbjct: 175 GKPYNQKSDIWALGCVLYELASLKRAFE 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 85.5 bits (212), Expect = 6e-18
 Identities = 68/207 (32%), Positives = 99/207 (47%), Gaps = 20/207 (9%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRT-HHKNL 549
           K++G GS GKV   +  LK T    AVK L+KD+   +++    MTE +++     H  L
Sbjct: 1   KVLGKGSFGKVL--LAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFL 58

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
            +L      +D+   V E +  G L  F      R    +    A  +  GL +LHE   
Sbjct: 59  TQLHSCFQTKDRLFFVMEYVNGGDLM-FHIQRSGRFDEPRARFYAAEIVLGLQFLHER-- 115

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK--LLNKDQTRTDTNMRGTMGYVAPE 667
             II+ D+K  NVLLD     +    KI+DFG+ K  +L    T T     GT  Y+APE
Sbjct: 116 -GIIYRDLKLDNVLLD-----SEGHIKIADFGMCKEGILGGVTTST---FCGTPDYIAPE 166

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            L   P    VD ++ GV+L E++ G+
Sbjct: 167 ILSYQPYGPAVDWWALGVLLYEMLAGQ 193

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 84.0 bits (208), Expect = 1e-17
 Identities = 75/296 (25%), Positives = 140/296 (47%), Gaps = 37/296 (12%)

Query: 492 FSKLVGTGSSGKVYRGILR---LKDTQIE-IAVKKLEKDIEKTNEEFMTELKIIGRTHHK 547
           F + +G G+ G V   + R   L+D   E +AVKKL+    +   +F  E++I+    H 
Sbjct: 8   FIQQLGKGNFGSVE--LCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHD 65

Query: 548 NLVRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
           N+V+  G C    +R   LV E +P G+L ++L    +R    + +  A  + +G+ YL 
Sbjct: 66  NIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLG 125

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGY 663
            +   + +H D+  +N+L++ +        KI DFG++K+L  +K+  +        + +
Sbjct: 126 SK---RYVHRDLATRNILVESENR-----VKIGDFGLTKVLPQDKEYYKVREPGESPIFW 177

Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS 723
            APE L     +   DV+SFGV+L E+     + + S     +E + ++ +D        
Sbjct: 178 YAPESLTESKFSVASDVWSFGVVLYELFT---YSDKSC-SPPAEFMRMMGND-------- 225

Query: 724 RNLQVLVSHDPEVLSDLERFER-------MAMVGLWCNHPDPNLRPSMKKVIHMLE 772
           +  Q++V H  E+L +  R          +  +   C + DP+ RPS  ++   +E
Sbjct: 226 KQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVE 281

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 84.1 bits (208), Expect = 1e-17
 Identities = 72/236 (30%), Positives = 114/236 (48%), Gaps = 29/236 (12%)

Query: 467 YFDPNSMEINFR-EFTFQELQEATKGFSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKK 522
           Y DP  +  + + EF    L      F K +G G+ GKV       L   D  +++AVK 
Sbjct: 18  YIDPTQLPYDLKWEFPRNNLS-----FGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKM 72

Query: 523 LEKDIEKTNEE-FMTELKIIGRTH---HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL 578
           L+     +  E  M+ELKI+  +H   H+N+V LLG C+     L++ E    G L NFL
Sbjct: 73  LKPTAHSSEREALMSELKIM--SHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFL 130

Query: 579 FHEGQRPGWVQR--VEIALGVARGLLYL-HEECETQIIHCDIKPQNVLLDLKTLDTNYMA 635
               +         +  +  VA+G+ +L  + C    IH D+  +NVLL         + 
Sbjct: 131 -RRKRESFLTLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNVLLT-----HGKIV 180

Query: 636 KISDFGISK-LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
           KI DFG+++ ++N        N R  + ++APE + N   T + DV+S+G++L EI
Sbjct: 181 KICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEI 236

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 83.5 bits (206), Expect = 1e-17
 Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 28/214 (13%)

Query: 496 VGTGSSGKVY----RGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           +G G+ GKV+      +L  +D  + +AVK L++  E   ++F  E +++    H+++VR
Sbjct: 13  LGEGAFGKVFLAECHNLLPEQDKML-VAVKALKEASESARQDFQREAELLTVLQHQHIVR 71

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFH-----------EGQRPGWV---QRVEIALGV 597
             G C+E    L+V+E M +G L+ FL             E   PG +   Q + IA  +
Sbjct: 72  FYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQI 131

Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNKDQTRTDTN 656
           A G++YL        +H D+  +N L     +    + KI DFG+S+ + + D  R    
Sbjct: 132 ASGMVYL---ASLHFVHRDLATRNCL-----VGQGLVVKIGDFGMSRDIYSTDYYRVGGR 183

Query: 657 MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
               + ++ PE +     TT+ D++SFGV+L EI
Sbjct: 184 TMLPIRWMPPESILYRKFTTESDIWSFGVVLWEI 217

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 82.9 bits (205), Expect = 1e-17
 Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 23/212 (10%)

Query: 490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNE---EFMTELKIIGRTHH 546
           KG  +L+G+GS G VY G+         +    L  D +   E   +   E+ ++ +  H
Sbjct: 4   KG--ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQH 61

Query: 547 KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLY 603
            N+V+ LG   EED   +  EL+P G+L+  L    ++ G      I L    +  GL Y
Sbjct: 62  PNIVQYLGTEREEDNLYIFLELVPGGSLAKLL----KKYGSFPEPVIRLYTRQILLGLEY 117

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           LH+      +H DIK  N+L     +DTN + K++DFG++K + +       + +G+  +
Sbjct: 118 LHDR---NTVHRDIKGANIL-----VDTNGVVKLADFGMAKQVVE--FSFAKSFKGSPYW 167

Query: 664 VAPEWLRNV-PVTTKVDVFSFGVMLLEIICGR 694
           +APE +          D++S G  +LE+  G+
Sbjct: 168 MAPEVIAQQGGYGLAADIWSLGCTVLEMATGK 199

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 82.7 bits (205), Expect = 2e-17
 Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 22/205 (10%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEE-FMTELKIIGRTHHKNLVRL 552
           +G G  G+V   ++++K      A+K ++K   +E   +E   +E +I+   +H  +V+L
Sbjct: 1   LGVGGFGRVE--LVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKL 58

Query: 553 LGFCSEEDKRLLVY---ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
             + + +DK+  +Y   E    G L   L   G    +  R  IA  V     YLH    
Sbjct: 59  --YRTFKDKKY-IYMLMEYCLGGELWTILRDRGLFDEYTARFYIA-CVVLAFEYLHNR-- 112

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             II+ D+KP+N+LLD     +N   K+ DFG +K L K   +T T   GT  YVAPE +
Sbjct: 113 -GIIYRDLKPENLLLD-----SNGYVKLVDFGFAKKL-KSGQKTWT-FCGTPEYVAPEII 164

Query: 670 RNVPVTTKVDVFSFGVMLLEIICGR 694
            N      VD +S G++L E++ GR
Sbjct: 165 LNKGYDFSVDYWSLGILLYELLTGR 189

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 83.9 bits (207), Expect = 2e-17
 Identities = 58/202 (28%), Positives = 108/202 (53%), Gaps = 13/202 (6%)

Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 13  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 72

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L + +LMP G L +++       G    +   + +A+G+ YL E    
Sbjct: 73  RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER--- 128

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL+      T    KI+DFG++KLL  D+        +  + ++A E +
Sbjct: 129 RLVHRDLAARNVLVK-----TPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESI 183

Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 184 LHRIYTHQSDVWSYGVTVWELM 205

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 82.3 bits (204), Expect = 2e-17
 Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 31/209 (14%)

Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLG 554
            +G GS G VY+ I   K+T   +A+K +   +E+  +E + E+ I+ +     +V+  G
Sbjct: 10  KLGEGSYGSVYKAIH--KETGQVVAIKVVP--VEEDLQEIIKEISILKQCDSPYIVKYYG 65

Query: 555 FCSEEDKRLLVYELMPNGTLSNFL------FHEGQRPGWVQRVEIAL---GVARGLLYLH 605
              +     +V E    G++S+ +        E          EIA       +GL YLH
Sbjct: 66  SYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTE---------EEIAAILYQTLKGLEYLH 116

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                + IH DIK  N+LL+ +       AK++DFG+S  L     + +T + GT  ++A
Sbjct: 117 SN---KKIHRDIKAGNILLNEEGQ-----AKLADFGVSGQLTDTMAKRNT-VIGTPFWMA 167

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           PE ++ +    K D++S G+  +E+  G+
Sbjct: 168 PEVIQEIGYNNKADIWSLGITAIEMAEGK 196

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 82.5 bits (204), Expect = 3e-17
 Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 11/201 (5%)

Query: 493 SKLVGTGSSGKVYRGI-LRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLV 550
            + +G G  G VY+G+ +  ++ +I +AVK  +     +  E+F+ E  I+ +  H ++V
Sbjct: 11  GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIV 70

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           +L+G    E+   +V EL P G L ++L            +  +  ++  L YL      
Sbjct: 71  KLIGVI-TENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLE---SK 126

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
           + +H DI  +NVL     + +    K+ DFG+S+ L  +     +  +  + ++APE + 
Sbjct: 127 RFVHRDIAARNVL-----VSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESIN 181

Query: 671 NVPVTTKVDVFSFGVMLLEII 691
               T+  DV+ FGV + EI+
Sbjct: 182 FRRFTSASDVWMFGVCMWEIL 202

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 82.7 bits (204), Expect = 3e-17
 Identities = 74/269 (27%), Positives = 119/269 (44%), Gaps = 37/269 (13%)

Query: 518 IAVKKLEKDIEKT-NEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSN 576
           +AVK L  D+ KT   +F+ E+KI+ R  + N++RLLG C  +D   ++ E M NG L+ 
Sbjct: 47  VAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQ 106

Query: 577 FLFHEGQRPGWVQRVEI-----------ALGVARGLLYLHEECETQIIHCDIKPQNVLLD 625
           FL        +     I           A+ +A G+ YL        +H D+  +N L  
Sbjct: 107 FLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYL---ASLNFVHRDLATRNCL-- 161

Query: 626 LKTLDTNYMAKISDFGISK-LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFG 684
              +  +Y  KI+DFG+S+ L + D  R        + ++A E +     TT  DV++FG
Sbjct: 162 ---VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFG 218

Query: 685 VMLLEI--ICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLER 742
           V L E+  +C  +   L   E+  E       +        +  Q+ +S  P   S +  
Sbjct: 219 VTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRN--------QGRQIYLSQTPLCPSPV-- 268

Query: 743 FERMAMVGLWCNHPDPNLRPSMKKVIHML 771
           F+ M    + C   D   RP+  K+ H L
Sbjct: 269 FKLM----MRCWSRDIKDRPTFNKIHHFL 293

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin

 Score = 77.7 bits (192), Expect = 3e-17
 Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 7/114 (6%)

Query: 35  TAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLT 94
           T  S  + +S +  F  GF++L        I +     +T+VW A+RD+P      +TL 
Sbjct: 3   TLSSGQTLVSGNSLFELGFFTLIMQNDYNLILYKSSS-RTVVWVANRDNPVSDSCTLTLQ 61

Query: 95  NDGKLLLTYFNGSV-----QQIYSGAASLALMQNDGNFVLKNANSAVVWDSFDF 143
           +DG L+L   +G V         +G   L L  +DGN V+ +++   +W SFD+
Sbjct: 62  SDGNLVLYDGDGRVVWSSNTTGANGNYVLVL-LDDGNLVIYDSDGNFLWQSFDY 114

Length = 114

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 82.0 bits (202), Expect = 3e-17
 Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 37/219 (16%)

Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRT-HHKNLVRL 552
           ++G G+ G+V +  ++    +++ A+K++ E   +  + +F  EL+++ +  HH N++ L
Sbjct: 2   VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 61

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHE---GQRPGWV------------QRVEIALGV 597
           LG C       L  E  P+G L +FL         P +             Q +  A  V
Sbjct: 62  LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 121

Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
           ARG+ YL ++   Q IH D+  +N+L     +  NY+AKI+DFG+S+         +  +
Sbjct: 122 ARGMDYLSQK---QFIHRDLAARNIL-----VGENYVAKIADFGLSR-------GQEVYV 166

Query: 658 RGTMGYVAPEWLR----NVPV-TTKVDVFSFGVMLLEII 691
           + TMG +   W+     N  V TT  DV+S+GV+L EI+
Sbjct: 167 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 205

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 82.0 bits (202), Expect = 5e-17
 Identities = 83/306 (27%), Positives = 141/306 (46%), Gaps = 49/306 (16%)

Query: 496 VGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           +G G+ GKV+      L  +  +I +AVK L+   +   ++F  E +++    H+++V+ 
Sbjct: 13  LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 72

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNF---------LFHEGQRPGWV---QRVEIALGVARG 600
            G C E D  ++V+E M +G L+ F         L  EG RP  +   Q + IA  +A G
Sbjct: 73  YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAG 132

Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNKDQTRTDTNMRG 659
           ++YL  +     +H D+  +N L     +  N + KI DFG+S+ + + D  R   +   
Sbjct: 133 MVYLASQ---HFVHRDLATRNCL-----VGENLLVKIGDFGMSRDVYSTDYYRVGGHTML 184

Query: 660 TMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRH--IELSRVEEESEEVDIVLSDWV 717
            + ++ PE +     TT+ DV+S GV+L EI    +    +LS  E             V
Sbjct: 185 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-------------V 231

Query: 718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEV 777
           I C+    +       P+ + DL       M+G W    +P++R ++K+ IH L   L  
Sbjct: 232 IECITQGRVLQRPRTCPKEVYDL-------MLGCW--QREPHMRLNIKE-IHSLLQNLAK 281

Query: 778 GMPPLL 783
             P  L
Sbjct: 282 ASPVYL 287

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 82.0 bits (202), Expect = 5e-17
 Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS+G V   I  +K +   +AVKK++   ++  E    E+ I+    H+N+V +   
Sbjct: 28  IGEGSTGIVC--IATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 85

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               D+  +V E +  G L++ + H   R    Q   + L V + L  LH +    +IH 
Sbjct: 86  YLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHR 140

Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  ++LL   T D     K+SDFG    ++K+  R  + + GT  ++APE +  +P  
Sbjct: 141 DIKSDSILL---THDGR--VKLSDFGFCAQVSKEVPRRKS-LVGTPYWMAPELISRLPYG 194

Query: 676 TKVDVFSFGVMLLEIICG 693
            +VD++S G+M++E++ G
Sbjct: 195 PEVDIWSLGIMVIEMVDG 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 81.4 bits (201), Expect = 5e-17
 Identities = 78/294 (26%), Positives = 130/294 (44%), Gaps = 50/294 (17%)

Query: 495 LVGTGSSGKVYR--------GILRLKDTQI-EIAVKKLEKDIEKTNEEFMTELKIIGRT- 544
            +G+G+ G VY+         +L LK+  +   A  K +++ +K+  + ++E+ II    
Sbjct: 7   HLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQL 66

Query: 545 HHKNLVRLLGFCSEEDKRLLVYELM---PNGTLSNFLFHEGQRPG----WVQRVEIALGV 597
            H N+VR      E D+  +V +L+   P G   N L  + QR      W   V++ L  
Sbjct: 67  RHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLA- 125

Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
              L YLH+E   +I+H D+ P N++L       +    I+DFG++K   K      T++
Sbjct: 126 ---LRYLHKE--KRIVHRDLTPNNIMLG-----EDDKVTITDFGLAK--QKQPESKLTSV 173

Query: 658 RGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV 717
            GT+ Y  PE ++N P   K DV++FG +L ++        L      +           
Sbjct: 174 VGTILYSCPEIVKNEPYGEKADVWAFGCILYQM------CTLQPPFYSTN---------- 217

Query: 718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML 771
              MLS   ++ V    E L +    E +  V   C  PD   RP + +V  M+
Sbjct: 218 ---MLSLATKI-VEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMI 267

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 81.2 bits (200), Expect = 6e-17
 Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 14/203 (6%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           K +G G  G+V+ G     +   ++AVK L K    + E F+ E +I+ +  H  LV+L 
Sbjct: 12  KKLGNGQFGEVWMGTW---NGNTKVAVKTL-KPGTMSPESFLEEAQIMKKLRHDKLVQLY 67

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQI 612
              SEE    +V E M  G+L +FL   EG+       V++A  VA G+ Y+        
Sbjct: 68  AVVSEE-PIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNY 123

Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV 672
           IH D++  N+L     +    + KI+DFG+++L+  ++       +  + + APE     
Sbjct: 124 IHRDLRSANIL-----VGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 178

Query: 673 PVTTKVDVFSFGVMLLEIICGRR 695
             T K DV+SFG++L E++   R
Sbjct: 179 RFTIKSDVWSFGILLTELVTKGR 201

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 84.9 bits (210), Expect = 8e-17
 Identities = 73/286 (25%), Positives = 130/286 (45%), Gaps = 35/286 (12%)

Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLG 554
           ++  G  G  Y+G  +     ++  VK++  D+       + ++   G+  H N+V+L+G
Sbjct: 697 VISRGKKGASYKG--KSIKNGMQFVVKEI-NDVNSIPSSEIADM---GKLQHPNIVKLIG 750

Query: 555 FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            C  E    L++E +    LS  L    +   W +R +IA+G+A+ L +LH  C   ++ 
Sbjct: 751 LCRSEKGAYLIHEYIEGKNLSEVL----RNLSWERRRKIAIGIAKALRFLHCRCSPAVVV 806

Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            ++ P+ +++D K  D  ++       +  LL      TDT    +  YVAPE      +
Sbjct: 807 GNLSPEKIIIDGK--DEPHLR----LSLPGLLC-----TDTKCFISSAYVAPETRETKDI 855

Query: 675 TTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDP 734
           T K D++ FG++L+E++ G+     S  + E   V   + +W   C    +L + +  DP
Sbjct: 856 TEKSDIYGFGLILIELLTGK-----SPADAEF-GVHGSIVEWARYCYSDCHLDMWI--DP 907

Query: 735 EVLSDL-----ERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL 775
            +  D+     E  E M +  L C   DP  RP    V+  LE   
Sbjct: 908 SIRGDVSVNQNEIVEVMNL-ALHCTATDPTARPCANDVLKTLESAS 952

Length = 968

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 81.0 bits (200), Expect = 8e-17
 Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 23/212 (10%)

Query: 494 KLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKDIEKTN--EEFMTELKIIGRTHHKNLV 550
           K++G G  G V  G L   D +Q+++AVK ++ DI   +  EEF++E   +    H N++
Sbjct: 5   KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVM 64

Query: 551 RLLGFCSEEDKR------LLVYELMPNGTLSNFLFHE--GQRPGWV---QRVEIALGVAR 599
           +L+G C E          +++   M +G L +FL +   G  P  +     ++  + +A 
Sbjct: 65  KLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIAL 124

Query: 600 GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS-KLLNKDQTRTDTNMR 658
           G+ YL        IH D+  +N +L       +    ++DFG+S K+ + D  R     +
Sbjct: 125 GMEYLSNR---NFIHRDLAARNCMLR-----EDMTVCVADFGLSKKIYSGDYYRQGRIAK 176

Query: 659 GTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
             + ++A E L +   T+K DV++FGV + EI
Sbjct: 177 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 208

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 81.2 bits (201), Expect = 8e-17
 Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 20/206 (9%)

Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN---EEFMTELKIIGRTHHKNLVR 551
           +VG G+ G V +   R K T   +A+KK  K+ E      +  + E+K++ +  H+N+V 
Sbjct: 8   VVGEGAYGVVLK--CRNKATGEIVAIKKF-KESEDDEDVKKTALREVKVLRQLRHENIVN 64

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFL--FHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           L      + +  LV+E +   TL   L     G  P  V+     L   + + Y H    
Sbjct: 65  LKEAFRRKGRLYLVFEYVER-TLLELLEASPGGLPPDAVRSYIWQL--LQAIAYCHSH-- 119

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             IIH DIKP+N+L+       + + K+ DFG ++ L        T+   T  Y APE L
Sbjct: 120 -NIIHRDIKPENILVSE-----SGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELL 173

Query: 670 -RNVPVTTKVDVFSFGVMLLEIICGR 694
             +      VDV++ G ++ E++ G 
Sbjct: 174 VGDTNYGKPVDVWAIGCIMAELLDGE 199

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 80.7 bits (199), Expect = 9e-17
 Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 18/214 (8%)

Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ-IEIAVKKLEKDI-EKTNEEFMTELKII 541
           EL   +    +++GTG  G++ RG L+L   + + +A+  L     +K    F+ E   +
Sbjct: 1   ELDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTL 60

Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF-HEGQRPGWVQRVEIALGVARG 600
           G+  H N+VRL G  +  +  ++V E M NG L +FL  HEGQ     Q + +  G+A G
Sbjct: 61  GQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVA-GQLMGMLPGLASG 119

Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-TNMRG 659
           + YL    E   +H  +    VL     ++++ + KIS F     L +D++    T M G
Sbjct: 120 MKYL---SEMGYVHKGLAAHKVL-----VNSDLVCKISGFR---RLQEDKSEAIYTTMSG 168

Query: 660 --TMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
              + + APE ++    ++  DV+SFG+++ E++
Sbjct: 169 KSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVM 202

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 80.7 bits (200), Expect = 9e-17
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 28/211 (13%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT---ELKIIGRTHH 546
           F+ L  +G GS G+VY+ I   K T   +A+K +  D+E+  +E      E++ + +   
Sbjct: 3   FTLLECIGKGSFGEVYKAI--DKRTNQVVAIKVI--DLEEAEDEIEDIQQEIQFLSQCRS 58

Query: 547 KNLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEIA---LGVARGLL 602
             + +  G    +  +L ++ E    G+  + L     +PG +    IA     V  GL 
Sbjct: 59  PYITKYYG-SFLKGSKLWIIMEYCGGGSCLDLL-----KPGKLDETYIAFILREVLLGLE 112

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           YLHEE     IH DIK  N+L     L      K++DFG+S  L    ++ +T   GT  
Sbjct: 113 YLHEE---GKIHRDIKAANIL-----LSEEGDVKLADFGVSGQLTSTMSKRNT-FVGTPF 163

Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           ++APE ++      K D++S G+  +E+  G
Sbjct: 164 WMAPEVIKQSGYDEKADIWSLGITAIELAKG 194

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 80.7 bits (199), Expect = 9e-17
 Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 25/219 (11%)

Query: 487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD------IEKTNEEFMTELKI 540
           E TKG  +++G G+ G VY G   L +    IAVK++E D       EK  E+   E+ +
Sbjct: 1   EWTKG--EVLGKGAYGTVYCG---LTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDL 55

Query: 541 IGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARG 600
           +    H N+V+ LG C +++   +  E +P G++S+ L   G  P  V   +    +  G
Sbjct: 56  LKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFC-KYTKQILDG 114

Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL-----NKDQTRTDT 655
           + YLH  C   ++H DIK  NV+     L  N + K+ DFG ++ L     +   +    
Sbjct: 115 VAYLHNNC---VVHRDIKGNNVM-----LMPNGIIKLIDFGCARRLAWVGLHGTHSNMLK 166

Query: 656 NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           +M GT  ++APE +       K D++S G  + E+  G+
Sbjct: 167 SMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGK 205

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 81.2 bits (200), Expect = 1e-16
 Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 16/200 (8%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ GKVY+   + K+T    A K +E   E+  E++M E++I+   +H  +V+LLG 
Sbjct: 20  LGDGAFGKVYKA--KNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGA 77

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
              + K  ++ E  P G +   +    +     Q   I   +   L YLH     +IIH 
Sbjct: 78  FYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM---KIIHR 134

Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP-----EWLR 670
           D+K  NVLL   TLD +   K++DFG+S    K   R D+ + GT  ++AP     E ++
Sbjct: 135 DLKAGNVLL---TLDGD--IKLADFGVSAKNVKTLQRRDSFI-GTPYWMAPEVVMCETMK 188

Query: 671 NVPVTTKVDVFSFGVMLLEI 690
           + P   K D++S G+ L+E+
Sbjct: 189 DTPYDYKADIWSLGITLIEM 208

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 80.8 bits (199), Expect = 1e-16
 Identities = 62/226 (27%), Positives = 112/226 (49%), Gaps = 36/226 (15%)

Query: 494 KLVGTGSSGKVYRGI-LRLKDTQ--IEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNL 549
           K +G G  GKV +    RLK       +AVK L+++   +   + ++E  ++ + +H ++
Sbjct: 6   KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHV 65

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFL----------------------FHEGQRPGW 587
           ++L G CS++   LL+ E    G+L +FL                       +  +R   
Sbjct: 66  IKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALT 125

Query: 588 VQRV-EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-L 645
           +  +   A  ++RG+ YL    E +++H D+  +NVL+     +   M KISDFG+S+ +
Sbjct: 126 MGDLISFAWQISRGMQYL---AEMKLVHRDLAARNVLV----AEGRKM-KISDFGLSRDV 177

Query: 646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
             +D     +  R  + ++A E L +   TT+ DV+SFGV+L EI+
Sbjct: 178 YEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 223

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 79.5 bits (196), Expect = 2e-16
 Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 27/210 (12%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN----EEFMTELKIIGRTHHKNLVR 551
           +G GS G V++ ++R  D ++  A+K++  D+ K N    EE + E +++ +     ++R
Sbjct: 8   IGKGSFGVVFK-VVRKADKRV-YAMKQI--DLSKMNRREREEAIDEARVLAKLDSSYIIR 63

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPG-----WVQRVEIALGVARGLLYLHE 606
                 ++ K  +V E   NG L   L  +  RP      W   ++I LG+A    +LH 
Sbjct: 64  YYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLA----HLHS 119

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
           +   +I+H DIK  N+ LD      N   KI D G++KLL+ D T     + GT  Y++P
Sbjct: 120 K---KILHRDIKSLNLFLDA---YDN--VKIGDLGVAKLLS-DNTNFANTIVGTPYYLSP 170

Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGRRH 696
           E   + P   K DV++ GV+L E  C  +H
Sbjct: 171 ELCEDKPYNEKSDVWALGVVLYE-CCTGKH 199

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 80.5 bits (199), Expect = 2e-16
 Identities = 59/185 (31%), Positives = 90/185 (48%), Gaps = 20/185 (10%)

Query: 518 IAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSN 576
           +AVK L  D  +   E+F+ E+KI+ R    N+ RLLG C+ +    ++ E M NG L+ 
Sbjct: 49  VAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQ 108

Query: 577 FL-FHEGQRPGWVQR---------VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDL 626
           FL  H  +  G             + +A  +A G+ YL        +H D+  +N L   
Sbjct: 109 FLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRNCL--- 162

Query: 627 KTLDTNYMAKISDFGISK-LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGV 685
             +  NY  KI+DFG+S+ L + D  R        + ++A E +     TTK DV++FGV
Sbjct: 163 --VGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGV 220

Query: 686 MLLEI 690
            L EI
Sbjct: 221 TLWEI 225

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 80.3 bits (198), Expect = 2e-16
 Identities = 61/222 (27%), Positives = 105/222 (47%), Gaps = 36/222 (16%)

Query: 496 VGTGSSGKVYR----GILRLKDTQIEIAVKKLEKDIE-KTNEEFMTELKIIGRTHHKNLV 550
           +G G+ G+V++    G+L  +     +AVK L+++       +F  E  ++    H N+V
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEP-FTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIV 71

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFH------------------EGQRP---GWVQ 589
           +LLG C+      L++E M  G L+ FL H                   G  P      +
Sbjct: 72  KLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTE 131

Query: 590 RVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS-KLLNK 648
           ++ IA  VA G+ YL E    + +H D+  +N L     +  N + KI+DFG+S  + + 
Sbjct: 132 QLCIAKQVAAGMAYLSER---KFVHRDLATRNCL-----VGENMVVKIADFGLSRNIYSA 183

Query: 649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
           D  +   N    + ++ PE +     TT+ DV+++GV+L EI
Sbjct: 184 DYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 225

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 80.1 bits (197), Expect = 2e-16
 Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 27/214 (12%)

Query: 496 VGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           +G G+ GKV+      L     ++ +AVK L+       ++F  E +++    H+++V+ 
Sbjct: 13  LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 72

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQ--------RP-------GWVQRVEIALGV 597
            G C + D  ++V+E M +G L+ FL   G         +P       G  Q + IA  +
Sbjct: 73  YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 132

Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNKDQTRTDTN 656
           A G++YL  +     +H D+  +N L     +  N + KI DFG+S+ + + D  R   +
Sbjct: 133 ASGMVYLASQ---HFVHRDLATRNCL-----VGANLLVKIGDFGMSRDVYSTDYYRVGGH 184

Query: 657 MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
               + ++ PE +     TT+ DV+SFGV+L EI
Sbjct: 185 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEI 218

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 80.1 bits (197), Expect = 2e-16
 Identities = 68/227 (29%), Positives = 121/227 (53%), Gaps = 18/227 (7%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMT--ELKIIGRTHHKNLV 550
           +++G G  G+V     +++ T    A KKLEK  I+K   E M   E +I+ + + + +V
Sbjct: 6   RVLGKGGFGEVC--ACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVV 63

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEI--ALGVARGLLYLHEEC 608
            L      +D   LV  LM  G L   ++H G+  G+ +   +  A  +  GL  LH+E 
Sbjct: 64  SLAYAYETKDALCLVLTLMNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLHQE- 121

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
             +I++ D+KP+N+LLD    D  ++ +ISD G++  + + QT       GT+GY+APE 
Sbjct: 122 --RIVYRDLKPENILLD----DHGHI-RISDLGLAVHVPEGQTIK--GRVGTVGYMAPEV 172

Query: 669 LRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSD 715
           ++N   T   D ++ G +L E+I G+   +  + + + EEV+ ++ +
Sbjct: 173 VKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE 219

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 79.9 bits (197), Expect = 3e-16
 Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 17/205 (8%)

Query: 494 KLVGTGSSGKV--YRGILRLKDTQIEIAVKKLEKDIEKTNEE-FMTELKIIGRTHHKNLV 550
           +++G G  GKV  Y        T   +AVK L+++  + N   +  E+ I+   +H+N+V
Sbjct: 10  RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIV 69

Query: 551 RLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           +  G CSE+  +   L+ E +P G+L ++L     +    Q +  A  +  G+ YLH + 
Sbjct: 70  KYKGCCSEQGGKGLQLIMEYVPLGSLRDYL--PKHKLNLAQLLLFAQQICEGMAYLHSQ- 126

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT--RTDTNMRGTMGYVAP 666
               IH D+  +NVLLD      + + KI DFG++K + +     R   +    + + A 
Sbjct: 127 --HYIHRDLAARNVLLD-----NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAV 179

Query: 667 EWLRNVPVTTKVDVFSFGVMLLEII 691
           E L+    +   DV+SFGV L E++
Sbjct: 180 ECLKENKFSYASDVWSFGVTLYELL 204

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 79.6 bits (196), Expect = 3e-16
 Identities = 64/204 (31%), Positives = 107/204 (52%), Gaps = 18/204 (8%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMT--ELKIIGRTHHKNLVRL 552
           +G G  G+V    +++K+T    A KKL+K  ++K + E M   E +I+ + +   +V L
Sbjct: 1   LGKGGFGEVCA--VQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNL 58

Query: 553 LGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRV-EIALGVARGLLYLHEECET 610
             +  E    L LV  LM  G L   +++ G+R   ++RV   +  +  G+L+LH     
Sbjct: 59  -AYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHS---M 114

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
            I++ D+KP+NVLLD          ++SD G++  +     +T T   GT GY+APE L+
Sbjct: 115 DIVYRDMKPENVLLD-----DQGNCRLSDLGLA--VELKDGKTITQRAGTNGYMAPEILK 167

Query: 671 NVPVTTKVDVFSFGVMLLEIICGR 694
             P +  VD F+ G  + E++ GR
Sbjct: 168 EEPYSYPVDWFAMGCSIYEMVAGR 191

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 79.3 bits (196), Expect = 3e-16
 Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 23/209 (11%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN---EEFMTELKIIGRTHHKNLVRL 552
           +G G++  VY  I        ++A+K++  D+EK     +E   E++ + + +H N+V+ 
Sbjct: 9   IGVGATAVVYAAIC--LPNNEKVAIKRI--DLEKCQTSVDELRKEVQAMSQCNHPNVVKY 64

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLHEECE 609
                  D+  LV   +  G+L + +       G +    IA     V +GL YLH    
Sbjct: 65  YTSFVVGDELWLVMPYLSGGSLLDIMKS-SYPRGGLDEAIIATVLKEVLKGLEYLHSN-- 121

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD---QTRTDTNMRGTMGYVAP 666
              IH DIK  N+L     L  +   KI+DFG+S  L        +      GT  ++AP
Sbjct: 122 -GQIHRDIKAGNIL-----LGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAP 175

Query: 667 EWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
           E +  V     K D++SFG+  +E+  G 
Sbjct: 176 EVMEQVHGYDFKADIWSFGITAIELATGA 204

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 79.3 bits (195), Expect = 3e-16
 Identities = 61/211 (28%), Positives = 104/211 (49%), Gaps = 22/211 (10%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVR 551
           K +G G  G V  G L   D+ +++AVK ++  I      E+F++E   +    H N++R
Sbjct: 5   KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMR 64

Query: 552 LLGFCSEEDKR------LLVYELMPNGTLSNFLFHE--GQRPGWVQR---VEIALGVARG 600
           L+G C +  +       +++   M +G L +FL +   G  P ++     V+    +A G
Sbjct: 65  LIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASG 124

Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNKDQTRTDTNMRG 659
           + YL  +     IH D+  +N +L+      N    ++DFG+SK + N D  R     + 
Sbjct: 125 MEYLSSK---SFIHRDLAARNCMLN-----ENMNVCVADFGLSKKIYNGDYYRQGRIAKM 176

Query: 660 TMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
            + ++A E L +   TTK DV+SFGV + EI
Sbjct: 177 PVKWIAIESLADRVYTTKSDVWSFGVTMWEI 207

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 80.4 bits (199), Expect = 3e-16
 Identities = 68/236 (28%), Positives = 104/236 (44%), Gaps = 52/236 (22%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKTNEE--FMTELKIIGRTHHKNLV 550
           K++G G+ G+V+  ++R KDT    A+K L K D+ K N+      E  I+       +V
Sbjct: 7   KVIGRGAFGEVW--LVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIV 64

Query: 551 RLLGFCSEEDKRLL--VYELMPNGTLSNFLFHEGQ-RPGWVQ--RVEIALGVARGLLYLH 605
           +L  + S +D+  L  V E MP G L N L  +        +    E+ L +      +H
Sbjct: 65  KL--YYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALD----SVH 118

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-------------DQTR 652
           +      IH DIKP N+L+D          K++DFG+ K +NK                R
Sbjct: 119 K---LGFIHRDIKPDNILIDADG-----HIKLADFGLCKKMNKAKDREYYLNDSHNLLFR 170

Query: 653 TDTNMR---------------GTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
            +  +R               GT  Y+APE LR  P   + D +S GV+L E++ G
Sbjct: 171 DNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYG 226

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 80.0 bits (197), Expect = 3e-16
 Identities = 71/224 (31%), Positives = 112/224 (50%), Gaps = 39/224 (17%)

Query: 494 KLVGTGSSGKVYR----GILRLK-DTQIEIAVKKL-----EKDIEKTNEEFMTELKIIGR 543
           K +G G  G+V R    GI + + D  + +AVK L     +KD+     E M  +K+IG+
Sbjct: 18  KPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISE-MELMKLIGK 76

Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL----------------FHEGQRPGW 587
             HKN++ LLG C++E    ++ E    G L  FL                  E Q   +
Sbjct: 77  --HKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQL-SF 133

Query: 588 VQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
              V  A  VARG+ YL      + IH D+  +NVL+     + N M KI+DFG+++ ++
Sbjct: 134 KDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVT----EDNVM-KIADFGLARGVH 185

Query: 648 K-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
             D  +  +N R  + ++APE L +   T + DV+SFG+++ EI
Sbjct: 186 DIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEI 229

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 79.3 bits (195), Expect = 4e-16
 Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 18/201 (8%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ GKVY+   + K+T +  A K ++   E+  E++M E+ I+    H N+V+LL  
Sbjct: 13  LGDGAFGKVYKA--QNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 70

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG-VARGLLYLHEECETQIIH 614
              E+   ++ E    G +   +  E +RP    ++ +        L YLH   E +IIH
Sbjct: 71  FYYENNLWILIEFCAGGAVDAVML-ELERPLTEPQIRVVCKQTLEALNYLH---ENKIIH 126

Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL----- 669
            D+K  N+L    TLD +   K++DFG+S    +   R D+ + GT  ++APE +     
Sbjct: 127 RDLKAGNILF---TLDGD--IKLADFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMCETS 180

Query: 670 RNVPVTTKVDVFSFGVMLLEI 690
           ++ P   K DV+S G+ L+E+
Sbjct: 181 KDRPYDYKADVWSLGITLIEM 201

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 79.7 bits (196), Expect = 4e-16
 Identities = 71/234 (30%), Positives = 119/234 (50%), Gaps = 39/234 (16%)

Query: 484 ELQEATKGFSKLVGTGSSGKVYR----GILRLKDTQI-EIAVKKLEKD-IEKTNEEFMTE 537
           E+        K +G G  G+V      G+ + K  ++ ++AVK L+ D  EK   + ++E
Sbjct: 14  EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISE 73

Query: 538 L---KIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR---- 590
           +   K+IG+  HKN++ LLG C+++    ++ E    G L  +L    +RP  ++     
Sbjct: 74  MEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYCYNP 129

Query: 591 -------------VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI 637
                        V  A  VARG+ YL  +   + IH D+  +NVL+     + N M KI
Sbjct: 130 TQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT----EDNVM-KI 181

Query: 638 SDFGISKLLNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
           +DFG+++ ++  D  +  TN R  + ++APE L +   T + DV+SFGV+L EI
Sbjct: 182 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 235

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 79.6 bits (196), Expect = 5e-16
 Identities = 76/252 (30%), Positives = 126/252 (50%), Gaps = 28/252 (11%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLV 550
           +++G GS GKV   + RLK++    AVK L+KD+   +   E  MTE +I+    +   +
Sbjct: 1   RVLGKGSFGKVM--LARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFL 58

Query: 551 RLLGFCSEEDKRLL-VYELMPNGTLSNFLFH--EGQRPGWVQRVEIALGVARGLLYLHEE 607
             L  C +   RL  V E +  G L   +FH  + +R    +    A  +   L++LH++
Sbjct: 59  TQLYCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARFYAAEITSALMFLHDK 115

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               II+ D+K  NVLLD +        K++DFG+ K    +   T T   GT  Y+APE
Sbjct: 116 ---GIIYRDLKLDNVLLDHEG-----HCKLADFGMCKEGIFNGKTTST-FCGTPDYIAPE 166

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVI-SCMLSRN- 725
            L+ +     VD ++ GV+L E++CG    E    E E +  + +L+D V+    LS++ 
Sbjct: 167 ILQEMLYGPSVDWWAMGVLLYEMLCGHAPFE---AENEDDLFEAILNDEVVYPTWLSQDA 223

Query: 726 ---LQVLVSHDP 734
              L+  ++ +P
Sbjct: 224 VDILKAFMTKNP 235

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 78.7 bits (194), Expect = 5e-16
 Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 25/223 (11%)

Query: 480 FTFQELQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEIAVKKLEK-DIEKTNEEFM 535
           F    LQE T      +G G  G+V+    +    +  +  + VK L+K   E    EF 
Sbjct: 2   FPRSNLQEIT-----TLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFR 56

Query: 536 TELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF-----HEGQRP---GW 587
            EL +  +  HKN+VRLLG C E +   ++ E    G L  FL       E  +P     
Sbjct: 57  RELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLST 116

Query: 588 VQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
            Q+V +   +A G+ +L      + +H D+  +N L     + +    K+S   +SK + 
Sbjct: 117 KQKVALCTQIALGMDHLS---NARFVHRDLAARNCL-----VSSQREVKVSLLSLSKDVY 168

Query: 648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
             +     N    + ++APE ++    +TK DV+SFGV++ E+
Sbjct: 169 NSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEV 211

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 78.9 bits (194), Expect = 6e-16
 Identities = 79/298 (26%), Positives = 146/298 (48%), Gaps = 50/298 (16%)

Query: 496 VGTGSSGKVYRGILR--LK-DTQIEIAVKKLEKDIE-KTNEEFMTELKIIGRTHHKNLVR 551
           +G GS G VY G  R  +K + +  +AVK + +    +   EF+ E  ++      ++VR
Sbjct: 14  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 73

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLF--------HEGQRPGWVQR-VEIALGVARGLL 602
           LLG  S+    L+V ELM +G L ++L         + G+ P  +Q  +++A  +A G+ 
Sbjct: 74  LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 133

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           YL+ +   + +H D+  +N +     +  ++  KI DFG++    +D   TD   +G  G
Sbjct: 134 YLNAK---KFVHRDLAARNCM-----VAHDFTVKIGDFGMT----RDIYETDYYRKGGKG 181

Query: 663 -----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV 717
                ++APE L++   TT  D++SFGV+L EI         S  E+  + +    ++ V
Sbjct: 182 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT--------SLAEQPYQGLS---NEQV 230

Query: 718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL 775
           +  ++         + PE ++DL     M M    C   +P +RP+  +++++L+  L
Sbjct: 231 LKFVMDGGYLDQPDNCPERVTDL-----MRM----CWQFNPKMRPTFLEIVNLLKDDL 279

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 78.2 bits (192), Expect = 8e-16
 Identities = 79/298 (26%), Positives = 146/298 (48%), Gaps = 50/298 (16%)

Query: 493 SKLVGTGSSGKVYRGILR--LKDT-QIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKN 548
           S+ +G GS G VY GI +  +KD  +  +A+K + E    +   EF+ E  ++   +  +
Sbjct: 11  SRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 70

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLF--------HEGQRPGWVQR-VEIALGVAR 599
           +VRLLG  S+    L++ ELM  G L ++L         +  Q P  +++ +++A  +A 
Sbjct: 71  VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIAD 130

Query: 600 GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG 659
           G+ YL+     + +H D+  +N +     +  ++  KI DFG++    +D   TD   +G
Sbjct: 131 GMAYLN---ANKFVHRDLAARNCM-----VAEDFTVKIGDFGMT----RDIYETDYYRKG 178

Query: 660 TMG-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS 714
             G     +++PE L++   TT  DV+SFGV+L EI         +  E+  + +    +
Sbjct: 179 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA--------TLAEQPYQGMS---N 227

Query: 715 DWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
           + V+  ++   L     + P++L     FE M M    C   +P +RPS  ++I  ++
Sbjct: 228 EQVLRFVMEGGLLDKPDNCPDML-----FELMRM----CWQYNPKMRPSFLEIISSIK 276

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 77.7 bits (191), Expect = 1e-15
 Identities = 58/202 (28%), Positives = 110/202 (54%), Gaps = 13/202 (6%)

Query: 494 KLVGTGSSGKVYRGILRL--KDTQIEIAVKKLEKDIE-KTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+GI     ++ +I +A+K L ++   K N+E + E  ++       + 
Sbjct: 13  KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVC 72

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L V +LMP G L +++     R G    +   + +A+G+ YL    E 
Sbjct: 73  RLLGICLTSTVQL-VTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLE---EV 128

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL+           KI+DFG+++LL+ D+T    +  +  + ++A E +
Sbjct: 129 RLVHRDLAARNVLVKSPN-----HVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI 183

Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 184 LHRRFTHQSDVWSYGVTVWELM 205

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 77.4 bits (190), Expect = 1e-15
 Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 18/198 (9%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+ G     +    +A+K L K    + E F+ E +++ +  H+ LV+L   
Sbjct: 14  LGQGCFGEVWMGTW---NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 69

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWV---QRVEIALGVARGLLYLHEECETQI 612
            SEE    +V E M  G+L +FL  +G+   ++   Q V++A  +A G+ Y+        
Sbjct: 70  VSEE-PIYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVER---MNY 123

Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV 672
           +H D++  N+L+       N + K++DFG+++L+  ++       +  + + APE     
Sbjct: 124 VHRDLRAANILVG-----ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 178

Query: 673 PVTTKVDVFSFGVMLLEI 690
             T K DV+SFG++L E+
Sbjct: 179 RFTIKSDVWSFGILLTEL 196

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 78.0 bits (192), Expect = 1e-15
 Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 34/226 (15%)

Query: 492 FSKLVGTGSSGKVY----RGILRLKDTQIE----------IAVKKLEKDIEKT-NEEFMT 536
           F + +G G  G+V+     G+ +  D              +AVK L +D  K    +F+ 
Sbjct: 9   FKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLK 68

Query: 537 ELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF-HEGQRPGWVQRVE--- 592
           E+KI+ R    N++RLL  C   D   ++ E M NG L+ FL  HE Q       V    
Sbjct: 69  EIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTIS 128

Query: 593 ------IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-L 645
                 +A  +A G+ YL        +H D+  +N L+       NY  KI+DFG+S+ L
Sbjct: 129 YSTLIFMATQIASGMKYL---SSLNFVHRDLATRNCLVGK-----NYTIKIADFGMSRNL 180

Query: 646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            + D  R        + +++ E +     TT  DV++FGV L EI+
Sbjct: 181 YSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEIL 226

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 77.8 bits (191), Expect = 2e-15
 Identities = 58/198 (29%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS+G V   I R K +  ++AVK ++   ++  E    E+ I+    H+N+V +   
Sbjct: 29  IGEGSTGIVC--IAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKS 86

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               ++  ++ E +  G L++ +     R    Q   +   V + L YLH +    +IH 
Sbjct: 87  YLVGEELWVLMEFLQGGALTDIV--SQTRLNEEQIATVCESVLQALCYLHSQ---GVIHR 141

Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  ++LL   TLD     K+SDFG    ++KD  +  + + GT  ++APE +   P  
Sbjct: 142 DIKSDSILL---TLDGR--VKLSDFGFCAQISKDVPKRKS-LVGTPYWMAPEVISRTPYG 195

Query: 676 TKVDVFSFGVMLLEIICG 693
           T+VD++S G+M++E++ G
Sbjct: 196 TEVDIWSLGIMVIEMVDG 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 76.8 bits (189), Expect = 2e-15
 Identities = 57/199 (28%), Positives = 105/199 (52%), Gaps = 14/199 (7%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           K +G G  G+V+ G     +   ++A+K L K    + E F+ E  ++ +  H  LVRL 
Sbjct: 12  KKLGAGQFGEVWMG---YYNGHTKVAIKSL-KQGSMSPEAFLAEANLMKQLQHPRLVRLY 67

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLLYLHEECETQI 612
              ++E    ++ E M NG+L +FL   EG +    + +++A  +A G+ ++  +     
Sbjct: 68  AVVTQE-PIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NY 123

Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV 672
           IH D++  N+L+  +TL      KI+DFG+++L+  ++       +  + + APE +   
Sbjct: 124 IHRDLRAANILVS-ETL----CCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 178

Query: 673 PVTTKVDVFSFGVMLLEII 691
             T K DV+SFG++L EI+
Sbjct: 179 TFTIKSDVWSFGILLTEIV 197

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 78.1 bits (192), Expect = 2e-15
 Identities = 73/234 (31%), Positives = 117/234 (50%), Gaps = 39/234 (16%)

Query: 484 ELQEATKGFSKLVGTGSSGKVYR----GILRLKDTQ-IEIAVKKLEKD-IEKTNEEFMTE 537
           EL        K +G G  G+V      GI + K  + + +AVK L+ D  +K   + ++E
Sbjct: 8   ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSE 67

Query: 538 L---KIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR---- 590
           +   K+IG+  HKN++ LLG C+++    ++ E    G L  +L    +RP  +      
Sbjct: 68  MEMMKMIGK--HKNIINLLGACTQDGPLYVLVEYASKGNLREYL--RARRPPGMDYSFDT 123

Query: 591 -------------VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI 637
                        V  A  VARG+ YL  +   + IH D+  +NVL+     + N M KI
Sbjct: 124 CKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLVT----EDNVM-KI 175

Query: 638 SDFGISK-LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
           +DFG+++ + N D  +  TN R  + ++APE L +   T + DV+SFGV+L EI
Sbjct: 176 ADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEI 229

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 76.9 bits (190), Expect = 2e-15
 Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 31/213 (14%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVK--KLEKDIEKTNEEFMTELKIIGR-THHKNLV 550
           +++G G+ GKVY+   R K T   +A+K   + +D E   EE   E  I+ + ++H N+ 
Sbjct: 12  EVIGEGTYGKVYKA--RHKKTGQLVAIKIMDIIEDEE---EEIKEEYNILRKYSNHPNIA 66

Query: 551 RLLGF------CSEEDKRLLVYELMPNGT---LSNFLFHEGQRPGWVQRVEIALGVARGL 601
              G          +D+  LV EL   G+   L   L  +G+R        I     RGL
Sbjct: 67  TFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGL 126

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YLHE    ++IH DIK QN+L     L  N   K+ DFG+S  L+    R +T + GT 
Sbjct: 127 AYLHEN---KVIHRDIKGQNIL-----LTKNAEVKLVDFGVSAQLDSTLGRRNTFI-GTP 177

Query: 662 GYVAPEWL-----RNVPVTTKVDVFSFGVMLLE 689
            ++APE +      +     + DV+S G+  +E
Sbjct: 178 YWMAPEVIACDEQPDASYDARSDVWSLGITAIE 210

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 76.9 bits (189), Expect = 2e-15
 Identities = 77/294 (26%), Positives = 133/294 (45%), Gaps = 43/294 (14%)

Query: 494 KLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKDIEKTN--EEFMTELKIIGRTHHKNLV 550
           +++G G  G V    L+ +D +  ++AVK L+ DI  ++  EEF+ E   +    H N++
Sbjct: 5   RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVI 64

Query: 551 RLLGFC--SEEDKRL----LVYELMPNGTLSNFLFHE--GQRPGWVQR---VEIALGVAR 599
           +L+G    S    RL    ++   M +G L  FL     G+ P  +     V   + +A 
Sbjct: 65  KLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIAS 124

Query: 600 GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS-KLLNKDQTRTDTNMR 658
           G+ YL  +     IH D+  +N +L+      N    ++DFG+S K+ + D  R     +
Sbjct: 125 GMEYLSSK---NFIHRDLAARNCMLN-----ENMTVCVADFGLSKKIYSGDYYRQGCASK 176

Query: 659 GTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVI 718
             + ++A E L +   TT  DV++FGV + EI+  R     + VE             + 
Sbjct: 177 LPVKWLALESLADNVYTTHSDVWAFGVTMWEIMT-RGQTPYAGVENSE----------IY 225

Query: 719 SCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
           + ++  N    +   P+ L D+  +E M      C  P+P  RPS + +   LE
Sbjct: 226 NYLIKGNR---LKQPPDCLEDV--YELMCQ----CWSPEPKCRPSFQHLRDQLE 270

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 76.2 bits (187), Expect = 3e-15
 Identities = 75/280 (26%), Positives = 126/280 (45%), Gaps = 38/280 (13%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+ G     +   ++A+K L K      E F+ E +I+ +  H  LV L   
Sbjct: 14  LGQGCFGEVWMGTW---NGTTKVAIKTL-KPGTMMPEAFLQEAQIMKKLRHDKLVPLYAV 69

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            SEE    +V E M  G+L +FL   +G+     Q V++A  +A G+ Y+        IH
Sbjct: 70  VSEE-PIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER---MNYIH 125

Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D++  N+L+       N + KI+DFG+++L+  ++       +  + + APE       
Sbjct: 126 RDLRAANILVG-----DNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 180

Query: 675 TTKVDVFSFGVMLLEIICGRRHIELSRVEEES-EEVDIVLSDWVISCMLSRNLQVLVSHD 733
           T K DV+SFG++L E++   R      V  E  E+V+             R  ++     
Sbjct: 181 TIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVE-------------RGYRMPCPQG 227

Query: 734 -PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
            PE L +L +          C   DP+ RP+ + +   LE
Sbjct: 228 CPESLHELMKL---------CWKKDPDERPTFEYIQSFLE 258

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 76.6 bits (188), Expect = 4e-15
 Identities = 70/224 (31%), Positives = 115/224 (51%), Gaps = 39/224 (17%)

Query: 494 KLVGTGSSGKVYR----GILRLKDTQ-IEIAVKKLEKD-IEKTNEEFMTEL---KIIGRT 544
           K +G G  G+V      GI + K  + + +AVK L+ D  EK   + ++E+   K+IG+ 
Sbjct: 21  KPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK- 79

Query: 545 HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR-------------- 590
            HKN++ LLG C+++    ++ E    G L  +L    +RP  ++               
Sbjct: 80  -HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDIARVPDEQMTF 136

Query: 591 ---VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
              V     VARG+ YL  +   + IH D+  +NVL+     + N M KI+DFG+++ +N
Sbjct: 137 KDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLVT----ENNVM-KIADFGLARDVN 188

Query: 648 K-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
             D  +  TN R  + ++APE L +   T + DV+SFGV++ EI
Sbjct: 189 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 232

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 75.9 bits (187), Expect = 5e-15
 Identities = 75/296 (25%), Positives = 134/296 (45%), Gaps = 42/296 (14%)

Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKK-LEKDIEK-TNEEFMTELKIIGRTHHKNLVRL 552
           LVG GS G V +   + K+T   +A+KK LE + +K   +  M E++++ +  H+NLV L
Sbjct: 8   LVGEGSYGMVMK--CKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNL 65

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNF-LFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           +     + +  LV+E + +  L +   +  G     V++      + RG+ + H      
Sbjct: 66  IEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRK--YLFQILRGIEFCHSH---N 120

Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           IIH DIKP+N+L+       + + K+ DFG ++ L        T+   T  Y APE L  
Sbjct: 121 IIHRDIKPENILVSQ-----SGVVKLCDFGFARTLAAPG-EVYTDYVATRWYRAPELLVG 174

Query: 672 VPVTTK-VDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM--LSRNLQV 728
                + VD+++ G ++ E++ G              + DI     +I C+  L    Q 
Sbjct: 175 DTKYGRAVDIWAVGCLVTEMLTGEPLF--------PGDSDIDQLYHIIKCLGNLIPRHQE 226

Query: 729 LVSHDP-----------EVLSDLERFERMAMVGL----WCNHPDPNLRPSMKKVIH 769
           +   +P           E+    +RF +++ + L     C   DP+ RPS  +++H
Sbjct: 227 IFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 77.2 bits (190), Expect = 5e-15
 Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 41/234 (17%)

Query: 486 QEATKGFSKL-----VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-NEEFMTELK 539
             A K  S+L     +G+G+ G VY+ I R   T    A+K +  + E T   +   E++
Sbjct: 67  PSAAKSLSELERVNRIGSGAGGTVYKVIHR--PTGRLYALKVIYGNHEDTVRRQICREIE 124

Query: 540 IIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSN-FLFHEGQRPGWVQRVEIALGVA 598
           I+   +H N+V+         +  ++ E M  G+L    +  E          ++A  + 
Sbjct: 125 ILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIADEQFL------ADVARQIL 178

Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR 658
            G+ YLH      I+H DIKP N+L++          KI+DFG+S++L   QT    N  
Sbjct: 179 SGIAYLHRR---HIVHRDIKPSNLLINSAK-----NVKIADFGVSRILA--QTMDPCNSS 228

Query: 659 -GTMGYVAPEWLRNVPVTTKV----------DVFSFGVMLLEIICGRRHIELSR 701
            GT+ Y++PE      + T +          D++S GV +LE   GR    + R
Sbjct: 229 VGTIAYMSPE-----RINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGR 277

Length = 353

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 76.1 bits (187), Expect = 6e-15
 Identities = 59/194 (30%), Positives = 91/194 (46%), Gaps = 28/194 (14%)

Query: 518 IAVKKLEKDIEK-TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSN 576
           +AVK L  D  K    +F+ E+KI+ R    N++RLLG C +ED   ++ E M NG L+ 
Sbjct: 49  VAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQ 108

Query: 577 FLFH----EGQRPG--------------WVQRVEIALGVARGLLYLHEECETQIIHCDIK 618
           FL      + +  G              +   + +AL +A G+ YL        +H D+ 
Sbjct: 109 FLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYL---SSLNFVHRDLA 165

Query: 619 PQNVLLDLKTLDTNYMAKISDFGISK-LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTK 677
            +N L     +  N   KI+DFG+S+ L   D  R        + ++A E +     TT 
Sbjct: 166 TRNCL-----VGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTA 220

Query: 678 VDVFSFGVMLLEII 691
            DV++FGV L EI+
Sbjct: 221 SDVWAFGVTLWEIL 234

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin

 Score = 71.2 bits (175), Expect = 6e-15
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 8/114 (7%)

Query: 37  GSNTSWLSPSGDFAFGFYSL-FGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTN 95
            S  + +S    F  GF+ L         I +     +T+VW A+RD+P+ +   +TL +
Sbjct: 5   SSGQTLVSSGSLFELGFFKLIMQSRDYNLILYKGSS-RTVVWVANRDNPSGSSCTLTLQS 63

Query: 96  DGKLLLTYFNGSV-----QQIYSGAASLALMQNDGNFVLKNANSAVVWDSFDFP 144
           DG L++   +G+V         +G   L L  +DGN VL +++   +W SFD+P
Sbjct: 64  DGNLVIYDGSGTVVWSSNTTRVNGNYVLVL-LDDGNLVLYDSDGNFLWQSFDYP 116

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. Length = 116

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 75.7 bits (186), Expect = 6e-15
 Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 17/205 (8%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKNLVRL 552
           +G G  G+V     +++ T    A KKL K   K  + +   M E +I+ + H + +V L
Sbjct: 1   LGKGGFGEVS--ACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSL 58

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEI--ALGVARGLLYLHEECE 609
                 +    LV  +M  G L   +++ + + PG+ +         +  GL +LH+   
Sbjct: 59  AYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR-- 116

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
            +II+ D+KP+NVLLD    D N   +ISD G++  L   Q++T     GT G++APE L
Sbjct: 117 -RIIYRDLKPENVLLDN---DGN--VRISDLGLAVELKDGQSKT-KGYAGTPGFMAPELL 169

Query: 670 RNVPVTTKVDVFSFGVMLLEIICGR 694
           +       VD F+ GV L E+I  R
Sbjct: 170 QGEEYDFSVDYFALGVTLYEMIAAR 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 75.7 bits (186), Expect = 8e-15
 Identities = 56/198 (28%), Positives = 97/198 (48%), Gaps = 13/198 (6%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+SG VY  I     T  E+A+K++    +   E  + E+ ++    H N+V  L  
Sbjct: 27  IGQGASGTVYTAID--VATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDS 84

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               D+  +V E +  G+L++ +       G  Q   +     + L +LH     Q+IH 
Sbjct: 85  YLVGDELWVVMEYLAGGSLTDVVTETCMDEG--QIAAVCRECLQALEFLHSN---QVIHR 139

Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  N+LL +     +   K++DFG    +  +Q++  T M GT  ++APE +      
Sbjct: 140 DIKSDNILLGM-----DGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYG 193

Query: 676 TKVDVFSFGVMLLEIICG 693
            KVD++S G+M +E++ G
Sbjct: 194 PKVDIWSLGIMAIEMVEG 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 75.1 bits (184), Expect = 8e-15
 Identities = 52/209 (24%), Positives = 106/209 (50%), Gaps = 14/209 (6%)

Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E+   +    K +G G  G+V+   +   +   ++AVK + K    + E F+ E  ++  
Sbjct: 2   EIPRESLKLEKKLGAGQFGEVW---MATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKT 57

Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLL 602
             H  LV+L    ++E    ++ E M  G+L +FL   EG +    + ++ +  +A G+ 
Sbjct: 58  LQHDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 116

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           ++ +      IH D++  N+L+   +L    + KI+DFG+++++  ++       +  + 
Sbjct: 117 FIEQR---NYIHRDLRAANILVS-ASL----VCKIADFGLARVIEDNEYTAREGAKFPIK 168

Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + APE +     T K DV+SFG++L+EI+
Sbjct: 169 WTAPEAINFGSFTIKSDVWSFGILLMEIV 197

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 75.4 bits (186), Expect = 9e-15
 Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 16/203 (7%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKK--LEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +G G+ G V++   + ++T   +A+KK  L +       + + E+K +    H  +V+LL
Sbjct: 8   IGEGAHGIVFKA--KDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLL 65

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVE-IALGVARGLLYLHEECETQI 612
                    +LV E MP   LS  L  E +RP    +V+     + +G+ Y+H      I
Sbjct: 66  DVFPHGSGFVLVMEYMP-SDLSEVLRDE-ERPLPEAQVKSYMRMLLKGVAYMHAN---GI 120

Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV 672
           +H D+KP N+L+         + KI+DFG+++L ++++ R  ++   T  Y APE L   
Sbjct: 121 MHRDLKPANLLISADG-----VLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGA 175

Query: 673 P-VTTKVDVFSFGVMLLEIICGR 694
                 VD+++ G +  E++ G 
Sbjct: 176 RKYDPGVDLWAVGCIFAELLNGS 198

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 74.1 bits (182), Expect = 2e-14
 Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 22/207 (10%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLE-----KDIEKTNEEFMTELKIIGRTHHKN 548
           KL+G G+ G+VY  +    DT  E+AVK++       + +K       E++++    H+ 
Sbjct: 8   KLLGQGAFGRVY--LCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHER 65

Query: 549 LVRLLGFCSEEDKRLLVY-ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           +V+  G C  +D+ L ++ E MP G++ + L   G     V R +    +  G+ YLH  
Sbjct: 66  IVQYYG-CLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTR-KYTRQILEGVEYLHSN 123

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR---GTMGYV 664
               I+H DIK  N+L D          K+ DFG SK L    +   T M+   GT  ++
Sbjct: 124 ---MIVHRDIKGANILRDS-----AGNVKLGDFGASKRLQTICSSG-TGMKSVTGTPYWM 174

Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           +PE +       K DV+S G  ++E++
Sbjct: 175 SPEVISGEGYGRKADVWSVGCTVVEML 201

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 73.9 bits (181), Expect = 2e-14
 Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 20/207 (9%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNL 549
           F+KL  +G GS G+VY+GI       + I +  LE + E   E+   E+ ++ +     +
Sbjct: 6   FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLE-EAEDEIEDIQQEITVLSQCDSPYI 64

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLHE 606
            R  G   +  K  ++ E +  G+  + L     +PG ++   IA     + +GL YLH 
Sbjct: 65  TRYYGSYLKGTKLWIIMEYLGGGSALDLL-----KPGPLEETYIATILREILKGLDYLHS 119

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
           E   + IH DIK  NVLL  +        K++DFG++  L   Q + +T + GT  ++AP
Sbjct: 120 E---RKIHRDIKAANVLLSEQG-----DVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAP 170

Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICG 693
           E ++      K D++S G+  +E+  G
Sbjct: 171 EVIKQSAYDFKADIWSLGITAIELAKG 197

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 73.8 bits (181), Expect = 2e-14
 Identities = 78/308 (25%), Positives = 139/308 (45%), Gaps = 66/308 (21%)

Query: 478 REFTFQELQEATKGFSKLVGTGSSGKVYRGI-LRLKDT-QIEIAVKKLE-KDIEKTNEEF 534
           R     EL++      KL+G+G  G V++GI +   D+ +I +A+K ++ +   +T +E 
Sbjct: 2   RILKETELRKL-----KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEI 56

Query: 535 MTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWV--QRV- 591
              +  +G   H  +VRLLG C     +L V +L P G+L   L H  Q    +  QR+ 
Sbjct: 57  TDHMLAMGSLDHAYIVRLLGICPGASLQL-VTQLSPLGSL---LDHVRQHRDSLDPQRLL 112

Query: 592 EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT 651
              + +A+G+ YL E     ++H ++  +N+LL      ++ + +I+DFG++ LL  D  
Sbjct: 113 NWCVQIAKGMYYLEEHR---MVHRNLAARNILLK-----SDSIVQIADFGVADLLYPDDK 164

Query: 652 RTDTN-MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVD 710
           +   +  +  + ++A E +     T + DV+S+GV + E                     
Sbjct: 165 KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWE--------------------- 203

Query: 711 IVLSDWVISCMLSRNLQVLVS-HDPEVLSDLERFERMA----------MVGLWCNHPDPN 759
                     M+S   +        EV   LE+ ER+A          MV + C   D N
Sbjct: 204 ----------MMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDEN 253

Query: 760 LRPSMKKV 767
           +RP+ K++
Sbjct: 254 VRPTFKEL 261

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 74.6 bits (183), Expect = 2e-14
 Identities = 67/204 (32%), Positives = 97/204 (47%), Gaps = 21/204 (10%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKNLVRL 552
           +G GS GKV +  +R +DTQ   A+K + K    +  E    + E  ++ + +   +V L
Sbjct: 1   IGKGSFGKVMQ--VRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPL 58

Query: 553 -LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
              F S E K  LV   +  G L    FH  QR G           A  L  L    +  
Sbjct: 59  KFSFQSPE-KLYLVLAFINGGEL----FHHLQREGRFDLSRARFYTAELLCALENLHKFN 113

Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKIS--DFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
           +I+ D+KP+N+LLD       Y   I+  DFG+ KL  KD  +T+T   GT  Y+APE L
Sbjct: 114 VIYRDLKPENILLD-------YQGHIALCDFGLCKLNMKDDDKTNT-FCGTPEYLAPELL 165

Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
                T  VD ++ GV+L E++ G
Sbjct: 166 LGHGYTKAVDWWTLGVLLYEMLTG 189

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 74.0 bits (182), Expect = 2e-14
 Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 44/222 (19%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF----MTELKIIGRTHHKNLVR 551
           +G G+ G+VY+   R KDT   +A+KK+  D EK  E F    + E+KI+ + +H+N+V 
Sbjct: 15  IGEGTYGQVYKA--RDKDTGELVALKKVRLDNEK--EGFPITAIREIKILRQLNHRNIVN 70

Query: 552 L----------LGFCSEEDKRLLVYELMPN---GTLSNFL--FHEGQRPGWVQRVEIALG 596
           L          L F  ++    LV+E M +   G L + L  F E     +++++     
Sbjct: 71  LKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQL----- 125

Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
              GL Y H+      +H DIK  N+LL+ K        K++DFG+++L N +++R  TN
Sbjct: 126 -LEGLNYCHK---KNFLHRDIKCSNILLNNKG-----QIKLADFGLARLYNSEESRPYTN 176

Query: 657 MRGTMGYVAPEWL----RNVPVTTKVDVFSFGVMLLEIICGR 694
              T+ Y  PE L    R  P    +DV+S G +L E+   +
Sbjct: 177 KVITLWYRPPELLLGEERYGPA---IDVWSCGCILGELFTKK 215

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 73.9 bits (182), Expect = 3e-14
 Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 17/203 (8%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKNLVRLL 553
           +G G+ G VY+   R K T   +A+KK++   E          E+K++   +H N+++LL
Sbjct: 7   IGEGTYGVVYKA--RDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLL 64

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVE-IALGVARGLLYLHEECETQI 612
                +    LV+E M +  L   +    QR      ++     + +GL + H      I
Sbjct: 65  DVFRHKGDLYLVFEFM-DTDLYKLIKDR-QRGLPESLIKSYLYQLLQGLAFCHSH---GI 119

Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV 672
           +H D+KP+N+L     ++T  + K++DFG+++       R  T+   T  Y APE L   
Sbjct: 120 LHRDLKPENLL-----INTEGVLKLADFGLARSFGSPV-RPYTHYVVTRWYRAPELLLGD 173

Query: 673 PV-TTKVDVFSFGVMLLEIICGR 694
              +T VD++S G +  E++  R
Sbjct: 174 KGYSTPVDIWSVGCIFAELLSRR 196

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 74.2 bits (182), Expect = 3e-14
 Identities = 72/206 (34%), Positives = 108/206 (52%), Gaps = 21/206 (10%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRL 552
           +G G+ G+VY+  +R KDT+   A+K L K     +K     + E  I+ RT       +
Sbjct: 1   IGKGTFGQVYQ--VRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFI 58

Query: 553 LG--FCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           +G  F  + D  L LV + M  G L   L  EG+      +  IA  V   L +LH+   
Sbjct: 59  VGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVL-ALEHLHKY-- 115

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL-LNKDQTRTDTNMRGTMGYVAPEW 668
             I++ D+KP+N+LLD     T ++A + DFG+SK  L  ++T T+T   GT  Y+APE 
Sbjct: 116 -DIVYRDLKPENILLDA----TGHIA-LCDFGLSKANLTDNKT-TNT-FCGTTEYLAPEV 167

Query: 669 LRNVPVTTK-VDVFSFGVMLLEIICG 693
           L +    TK VD +S GV++ E+ CG
Sbjct: 168 LLDEKGYTKHVDFWSLGVLVFEMCCG 193

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 73.3 bits (180), Expect = 4e-14
 Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 31/217 (14%)

Query: 500 SSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMT--ELKIIGRTHHKNLVRLLGFC 556
           ++GK+Y             A KKLEK  I+K   E M   E +I+ + + + +V L    
Sbjct: 23  ATGKMY-------------ACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY 69

Query: 557 SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEECETQIIH 614
             +D   LV  LM  G L   +++ G  PG+ +   V  A  +  GL  LH E   +I++
Sbjct: 70  ETKDALCLVLTLMNGGDLKFHIYNMGN-PGFDEERAVFYAAEITCGLEDLHRE---RIVY 125

Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGIS-KLLNKDQTRTDTNMRGTMGYVAPEWLRNVP 673
            D+KP+N+LLD    D  ++ +ISD G++ ++   +  R      GT+GY+APE ++N  
Sbjct: 126 RDLKPENILLD----DYGHI-RISDLGLAVEIPEGETIRGRV---GTVGYMAPEVVKNER 177

Query: 674 VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVD 710
            T   D +  G ++ E+I G+      + + + EEV+
Sbjct: 178 YTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVE 214

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 72.7 bits (179), Expect = 4e-14
 Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 27/225 (12%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVR 551
           + +G GS G V + + R  D +I +  K+++     EK  ++ ++E+ I+    H N+VR
Sbjct: 6   ETIGKGSFGTVRK-VRRKSDGKI-LVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVR 63

Query: 552 LLG-FCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC- 608
                    ++ L +V E    G L+  +    +   +++  E    +   LL    EC 
Sbjct: 64  YYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEE-EFIWRILTQLLLALYECH 122

Query: 609 -----ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
                   ++H D+KP N+      LD N   K+ DFG++K+L  D +   T + GT  Y
Sbjct: 123 NRSDPGNTVLHRDLKPANIF-----LDANNNVKLGDFGLAKILGHDSSFAKTYV-GTPYY 176

Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEIIC-------GRRHIELSR 701
           ++PE L ++    K D++S G ++ E +C        R  ++L+ 
Sbjct: 177 MSPEQLNHMSYDEKSDIWSLGCLIYE-LCALSPPFTARNQLQLAS 220

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 72.7 bits (178), Expect = 6e-14
 Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 30/228 (13%)

Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLK--DTQIEIAVKKLEKDIEKTNE--EFMTELK 539
           EL  +   F + +G  + GK+Y+G L L   D    +A+K L KDI    +  EF  E  
Sbjct: 1   ELPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTL-KDINNPQQWGEFQQEAS 59

Query: 540 IIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHE---------GQRPGWVQR 590
           ++   HH N+V LLG  ++E    +++E +  G L  FL                G V+ 
Sbjct: 60  LMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKS 119

Query: 591 -------VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS 643
                  + IA+ +A G+ YL        +H D+  +N+L     +      KISD G+S
Sbjct: 120 SLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNIL-----IGEQLHVKISDLGLS 171

Query: 644 K-LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
           + + + D  R        + ++ PE +     ++  D++SFGV+L EI
Sbjct: 172 REIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 72.8 bits (179), Expect = 6e-14
 Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 30/226 (13%)

Query: 480 FTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTEL 538
           FT ++L++   G    +G G+ G V +  +  K +   +AVK++     EK  +  + +L
Sbjct: 1   FTAEDLKD--LG---EIGRGAFGTVNK--MLHKPSGTIMAVKRIRSTVDEKEQKRLLMDL 53

Query: 539 KIIGRTHH-KNLVRLLGFCSEEDKRLLVYELMPNGTLSNF--LFHEGQRPGWVQRV--EI 593
            ++ R+     +V+  G    E    +  ELM + +L  F    +E  +    + +  +I
Sbjct: 54  DVVMRSSDCPYIVKFYGALFREGDCWICMELM-DISLDKFYKYVYEVLKSVIPEEILGKI 112

Query: 594 ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS-KLLNK-DQT 651
           A+   + L YL EE   +IIH D+KP N+LLD      N   K+ DFGIS +L++   +T
Sbjct: 113 AVATVKALNYLKEE--LKIIHRDVKPSNILLDR-----NGNIKLCDFGISGQLVDSIAKT 165

Query: 652 RTDTNMRGTMGYVAPEWL---RNVPVTTKVDVFSFGVMLLEIICGR 694
           R D    G   Y+APE +          + DV+S G+ L E+  G+
Sbjct: 166 R-DA---GCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGK 207

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 71.7 bits (176), Expect = 1e-13
 Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 22/209 (10%)

Query: 497 GTGSSGKVYRGILR------LKDTQIEIAV--KKLEKDIEKTNEEFMTELKIIGRTHHKN 548
           G G+   +Y+G+LR      +     E++V  K L  D    +  F     ++ +  HK+
Sbjct: 4   GQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR-DSLAFFETASLMSQLSHKH 62

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           LV+L G C   D+ ++V E +  G L  FL  E        ++++A  +A  L YL ++ 
Sbjct: 63  LVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK- 120

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNY--MAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
             +++H ++  +N+L+    L+  Y    K+SD GI   +   + R +      + ++AP
Sbjct: 121 --KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVE-----RIPWIAP 173

Query: 667 EWLRNVPV--TTKVDVFSFGVMLLEIICG 693
           E +RN     T   D +SFG  LLEI   
Sbjct: 174 ECIRNGQASLTIAADKWSFGTTLLEICSN 202

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 72.1 bits (177), Expect = 1e-13
 Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 24/211 (11%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           F  ++G GS GKV       K T    A+K L+KD+   +++    M E +++       
Sbjct: 4   FLMVLGKGSFGKVMLA--ERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPP 61

Query: 549 LVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEI--ALGVARGLLYLH 605
            +  L  C +   RL  V E +  G L   ++H  Q   + +   +  A  +A GL +LH
Sbjct: 62  FLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGKFKEPHAVFYAAEIAIGLFFLH 118

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK--LLNKDQTRTDTNMRGTMGY 663
            +    II+ D+K  NV+LD          KI+DFG+ K  +     TRT     GT  Y
Sbjct: 119 SK---GIIYRDLKLDNVMLD-----AEGHIKIADFGMCKENIFGGKTTRT---FCGTPDY 167

Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           +APE +   P    VD ++FGV+L E++ G+
Sbjct: 168 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 198

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 72.0 bits (177), Expect = 2e-13
 Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 47/224 (20%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF--MTELKIIGRTHHK 547
           F KL  +G G+ G VYR   R   +   +A+KK+  D E+       + E+ ++    H 
Sbjct: 9   FEKLNRIGEGTYGIVYRA--RDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHP 66

Query: 548 NLVRLL---------------GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVE 592
           N+V L                 +C ++   LL  + MP        F E Q         
Sbjct: 67  NIVELKEVVVGKHLDSIFLVMEYCEQDLASLL--DNMPTP------FSESQVKC------ 112

Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL-NKDQT 651
           + L + RGL YLHE     IIH D+K  N+LL  K        KI+DFG+++      + 
Sbjct: 113 LMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGC-----LKIADFGLARTYGLPAKP 164

Query: 652 RTDTNMRGTMGYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICGR 694
            T   +  T+ Y APE L      TT +D+++ G +L E++  +
Sbjct: 165 MTPKVV--TLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHK 206

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 71.7 bits (175), Expect = 2e-13
 Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 13/198 (6%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+SG VY   + +   Q E+A+K++    +   E  + E+ ++    + N+V  L  
Sbjct: 27  IGQGASGTVYTA-IDIATGQ-EVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 84

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               D+  +V E +  G+L++ +       G  Q   +     + L +LH     Q+IH 
Sbjct: 85  YLVGDELWVVMEYLAGGSLTDVVTETCMDEG--QIAAVCRECLQALDFLHS---NQVIHR 139

Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  N+LL +     +   K++DFG    +  +Q++  T M GT  ++APE +      
Sbjct: 140 DIKSDNILLGM-----DGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYG 193

Query: 676 TKVDVFSFGVMLLEIICG 693
            KVD++S G+M +E++ G
Sbjct: 194 PKVDIWSLGIMAIEMVEG 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 71.3 bits (174), Expect = 2e-13
 Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 21/214 (9%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNL 549
           F+KL  +G GS G+V++GI       + I +  LE + E   E+   E+ ++ +     +
Sbjct: 6   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE-EAEDEIEDIQQEITVLSQCDSPYV 64

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLHE 606
            +  G   ++ K  ++ E +  G+  + L      PG +   +IA     + +GL YLH 
Sbjct: 65  TKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS 119

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
           E   + IH DIK  NVLL       +   K++DFG++  L   Q + +T + GT  ++AP
Sbjct: 120 E---KKIHRDIKAANVLLS-----EHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAP 170

Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGR-RHIEL 699
           E ++     +K D++S G+  +E+  G   H EL
Sbjct: 171 EVIKQSAYDSKADIWSLGITAIELAKGEPPHSEL 204

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 71.0 bits (174), Expect = 2e-13
 Identities = 65/210 (30%), Positives = 99/210 (47%), Gaps = 25/210 (11%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVK--KLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +G G+ G VY+  +  + T + +A+K  +LE D  K N+  M EL I+ +     +V   
Sbjct: 9   LGKGNYGSVYK--VLHRPTGVTMAMKEIRLELDESKFNQIIM-ELDILHKAVSPYIVDFY 65

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWV---QRVEIALGVARGLLYLHEECET 610
           G    E    +  E M  G+L   L+  G     +       I   V +GL +L EE   
Sbjct: 66  GAFFIEGAVYMCMEYMDAGSLDK-LYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--H 122

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
            IIH D+KP NVL     ++ N   K+ DFG+S  L     +T+    G   Y+APE ++
Sbjct: 123 NIIHRDVKPTNVL-----VNGNGQVKLCDFGVSGNLVASLAKTNI---GCQSYMAPERIK 174

Query: 671 ------NVPVTTKVDVFSFGVMLLEIICGR 694
                 N   T + DV+S G+ +LE+  GR
Sbjct: 175 SGGPNQNPTYTVQSDVWSLGLSILEMALGR 204

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 70.4 bits (173), Expect = 2e-13
 Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 32/206 (15%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLE-----KDIEKTNEEFMTELKIIGRTHHKNLV 550
           +G+G+ G VY+         + I V KLE     + I++       E+ ++    H N+V
Sbjct: 11  IGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQ-------EISMLKECRHPNIV 63

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVAR----GLLYLHE 606
              G     DK  +V E    G+L + ++   + P  +  ++IA  V R    GL YLHE
Sbjct: 64  AYFGSYLRRDKLWIVMEYCGGGSLQD-IYQVTRGP--LSELQIAY-VCRETLKGLAYLHE 119

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
              T  IH DIK  N+LL   T D +   K++DFG+S  L     +  + + GT  ++AP
Sbjct: 120 ---TGKIHRDIKGANILL---TEDGD--VKLADFGVSAQLTATIAKRKSFI-GTPYWMAP 170

Query: 667 EWL---RNVPVTTKVDVFSFGVMLLE 689
           E     R      K D+++ G+  +E
Sbjct: 171 EVAAVERKGGYDGKCDIWALGITAIE 196

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 70.9 bits (174), Expect = 3e-13
 Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 29/226 (12%)

Query: 478 REFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKTNEEFMT 536
                 +L+         +G+G+ G+VY+  +R K T   +AVK++ +   ++ N+  + 
Sbjct: 10  YPADLNDLE-----NLGEIGSGTCGQVYK--MRFKKTGHVMAVKQMRRTGNKEENKRILM 62

Query: 537 ELKIIGRTHH-KNLVRLLG-FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV--E 592
           +L ++ ++H    +V+  G F ++ D  + + ELM   T  + L    Q P   + +  +
Sbjct: 63  DLDVVLKSHDCPYIVKCYGYFITDSDVFICM-ELM--STCLDKLLKRIQGP-IPEDILGK 118

Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           + + + + L YL E+    +IH D+KP N+LLD          K+ DFGIS  L   + +
Sbjct: 119 MTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASG-----NVKLCDFGISGRLVDSKAK 171

Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK----VDVFSFGVMLLEIICGR 694
           T +   G   Y+APE +       K     DV+S G+ L+E+  G+
Sbjct: 172 TRS--AGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQ 215

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 70.4 bits (172), Expect = 3e-13
 Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 20/223 (8%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMT--ELKIIGRTHHKNLV 550
           +++G G  G+V     +++ T    A K+LEK  I+K   E M   E +I+ + + + +V
Sbjct: 6   RVLGKGGFGEVC--ACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVV 63

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEEC 608
            L      +D   LV  +M  G L   +++ G  PG+ +   +  A  +  GL  LH E 
Sbjct: 64  NLAYAYETKDALCLVLTIMNGGDLKFHIYNMGN-PGFEEERALFYAAEILCGLEDLHRE- 121

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS-KLLNKDQTRTDTNMRGTMGYVAPE 667
               ++ D+KP+N+LLD    D  ++ +ISD G++ K+   +  R      GT+GY+APE
Sbjct: 122 --NTVYRDLKPENILLD----DYGHI-RISDLGLAVKIPEGESIRGRV---GTVGYMAPE 171

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVD 710
            L N   T   D +  G ++ E+I G+      + + + EEVD
Sbjct: 172 VLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVD 214

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 71.0 bits (174), Expect = 4e-13
 Identities = 69/209 (33%), Positives = 102/209 (48%), Gaps = 24/209 (11%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIG-RTHHKNL 549
           K++G GS GKV   +  LK T    A+K L+KD+   +   E  M E +++     H  L
Sbjct: 1   KVLGKGSFGKVM--LAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFL 58

Query: 550 VRLLGFCSEEDKRLL--VYELMPNGTLSNFLFH--EGQRPGWVQRVEIALGVARGLLYLH 605
             L  FC+ + K  L  V E +  G L   +FH     R    +    A  +  GL +LH
Sbjct: 59  THL--FCTFQTKEHLFFVMEYLNGGDL---MFHIQSSGRFDEARARFYAAEIICGLQFLH 113

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
           ++    II+ D+K  NVLLD      +   KI+DFG+ K     + +  T   GT  Y+A
Sbjct: 114 KK---GIIYRDLKLDNVLLD-----KDGHIKIADFGMCKENMNGEGKAST-FCGTPDYIA 164

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           PE L+       VD +SFGV+L E++ G+
Sbjct: 165 PEILKGQKYNESVDWWSFGVLLYEMLIGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 70.6 bits (173), Expect = 5e-13
 Identities = 66/204 (32%), Positives = 95/204 (46%), Gaps = 16/204 (7%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEE--FMTELKI-IGRTHHKNL 549
           K++G GS GKV   + + K      AVK L+K  I K  E+   M E  + +    H  L
Sbjct: 1   KVIGKGSFGKVL--LAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFL 58

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V L       DK   V + +  G L   L  E   P    R   A  +A  L YLH    
Sbjct: 59  VGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARF-YAAEIASALGYLHS--- 114

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             II+ D+KP+N+LLD       ++  ++DFG+ K    + ++T +   GT  Y+APE L
Sbjct: 115 LNIIYRDLKPENILLD----SQGHVV-LTDFGLCKE-GIEHSKTTSTFCGTPEYLAPEVL 168

Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
           R  P    VD +  G +L E++ G
Sbjct: 169 RKQPYDRTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 69.7 bits (170), Expect = 6e-13
 Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 22/208 (10%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLE-KDIEKTNEEFMTELKIIGRTHHKN 548
           F+KL  +G GS G+V++GI     TQ  +A+K ++ ++ E   E+   E+ ++ +     
Sbjct: 6   FTKLERIGKGSFGEVFKGID--NRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 63

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLH 605
           + +  G   +  K  ++ E +  G+  + L     R G     +IA     + +GL YLH
Sbjct: 64  VTKYYGSYLKGTKLWIIMEYLGGGSALDLL-----RAGPFDEFQIATMLKEILKGLDYLH 118

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
            E   + IH DIK  NVLL           K++DFG++  L   Q + +T + GT  ++A
Sbjct: 119 SE---KKIHRDIKAANVLLS-----EQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMA 169

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           PE ++     +K D++S G+  +E+  G
Sbjct: 170 PEVIQQSAYDSKADIWSLGITAIELAKG 197

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 70.2 bits (172), Expect = 6e-13
 Identities = 63/207 (30%), Positives = 94/207 (45%), Gaps = 21/207 (10%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKNLV 550
           KL+G G+ GKV   ++R K T    A+K L+K++    +E    +TE +++  T H  L 
Sbjct: 1   KLLGKGTFGKVI--LVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLT 58

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR---VEIALGVARGLLYLHEE 607
            L       D+   V E    G L   L  E        R    EI       L YLH  
Sbjct: 59  ALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA----LGYLHSC 114

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +++ D+K +N++LD      +   KI+DFG+ K    D     T   GT  Y+APE
Sbjct: 115 ---DVVYRDLKLENLMLD-----KDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPE 165

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            L +      VD +  GV++ E++CGR
Sbjct: 166 VLEDNDYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 70.4 bits (172), Expect = 7e-13
 Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 19/206 (9%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKN 548
           F + +GTGS G+V     + +D    +A+K+ EK     +K  +   +E KI+   +H  
Sbjct: 34  FIRTLGTGSFGRVILATYKNEDFP-PVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPF 92

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V L G   +E    LV E +  G    FL    + P      ++    A  ++ + E  
Sbjct: 93  CVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPN-----DVGCFYAAQIVLIFEYL 147

Query: 609 ET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
           ++  I++ D+KP+N+LLD      +   K++DFG +K++    TRT T + GT  Y+APE
Sbjct: 148 QSLNIVYRDLKPENLLLD-----KDGFIKMTDFGFAKVV---DTRTYT-LCGTPEYIAPE 198

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L NV      D ++ G+ + EI+ G
Sbjct: 199 ILLNVGHGKAADWWTLGIFIYEILVG 224

Length = 340

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 69.6 bits (170), Expect = 7e-13
 Identities = 55/203 (27%), Positives = 103/203 (50%), Gaps = 15/203 (7%)

Query: 496 VGTGSSGKVY--RGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRL 552
           +G G  GKV   R      +T  ++AVK L+ +       +   E++I+   +H+N+V+ 
Sbjct: 12  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71

Query: 553 LGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
            G C+E+      L+ E +P+G+L  +L     +    Q+++ A+ + +G+ YL      
Sbjct: 72  KGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR--- 128

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPEW 668
           Q +H D+  +NVL     +++ +  KI DFG++K +  +K+      ++   + + APE 
Sbjct: 129 QYVHRDLAARNVL-----VESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPEC 183

Query: 669 LRNVPVTTKVDVFSFGVMLLEII 691
           L         DV+SFGV L E++
Sbjct: 184 LIQSKFYIASDVWSFGVTLYELL 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 69.4 bits (169), Expect = 8e-13
 Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 13/198 (6%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+SG VY  +     T  E+A++++    +   E  + E+ ++    + N+V  L  
Sbjct: 28  IGQGASGTVYTAMDVA--TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               D+  +V E +  G+L++ +       G  Q   +     + L +LH     Q+IH 
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVVTETCMDEG--QIAAVCRECLQALEFLHS---NQVIHR 140

Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  N+LL +     +   K++DFG    +  +Q++  + M GT  ++APE +      
Sbjct: 141 DIKSDNILLGM-----DGSVKLTDFGFCAQITPEQSKR-STMVGTPYWMAPEVVTRKAYG 194

Query: 676 TKVDVFSFGVMLLEIICG 693
            KVD++S G+M +E+I G
Sbjct: 195 PKVDIWSLGIMAIEMIEG 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 69.6 bits (170), Expect = 9e-13
 Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 26/213 (12%)

Query: 491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHK 547
            F  ++G GS GKV   +   K T    A+K L+KD+   +++    M E +++      
Sbjct: 3   NFLMVLGKGSFGKVM--LAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKP 60

Query: 548 NLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWV---QRVEIALGVARGLLY 603
             +  L  C +   RL  V E +  G L   ++H  Q+ G     Q V  A  ++ GL +
Sbjct: 61  PFLTQLHSCFQTVDRLYFVMEYVNGGDL---MYHI-QQVGKFKEPQAVFYAAEISVGLFF 116

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK--LLNKDQTRTDTNMRGTM 661
           LH      II+ D+K  NV+LD +        KI+DFG+ K  +++   TRT     GT 
Sbjct: 117 LHRR---GIIYRDLKLDNVMLDSEG-----HIKIADFGMCKEHMVDGVTTRT---FCGTP 165

Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
            Y+APE +   P    VD +++GV+L E++ G+
Sbjct: 166 DYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 198

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 69.1 bits (169), Expect = 1e-12
 Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 21/203 (10%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKK--LEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +G G+ G VY+   R + T   IA+KK  LE++ E      + E+ ++    H N+VRL 
Sbjct: 10  IGEGTYGVVYKA--RDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIA----LGVARGLLYLHEECE 609
                E +  LV+E +      +   H    P + +   +       + RG+ Y H    
Sbjct: 68  DVVHSEKRLYLVFEYLD----LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH-- 121

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE-W 668
            +++H D+KPQN+L+D +   TN + K++DFG+++       RT T+   T+ Y APE  
Sbjct: 122 -RVLHRDLKPQNLLIDRR---TNAL-KLADFGLARAFGI-PVRTFTHEVVTLWYRAPEIL 175

Query: 669 LRNVPVTTKVDVFSFGVMLLEII 691
           L +   +T VD++S G +  E++
Sbjct: 176 LGSRHYSTPVDIWSVGCIFAEMV 198

Length = 294

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 69.5 bits (170), Expect = 1e-12
 Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 24/204 (11%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DI--EKTNEEFMTELKIIGRTHHKNLVRL 552
           +GTGS G+V   I + K T    A+K L+K +I   K  +    E  I+    H  +V +
Sbjct: 26  LGTGSFGRVR--IAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNM 83

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR---VEIALGVARGLLYLHEECE 609
           +    +E++   + E +  G L   L   G+ P  V +    E+ L       YLH +  
Sbjct: 84  MCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFE----YLHSK-- 137

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             II+ D+KP+N+LLD K        K++DFG +K   K   RT T + GT  Y+APE +
Sbjct: 138 -DIIYRDLKPENLLLDNKG-----HVKVTDFGFAK---KVPDRTFT-LCGTPEYLAPEVI 187

Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
           ++      VD ++ GV+L E I G
Sbjct: 188 QSKGHGKAVDWWTMGVLLYEFIAG 211

Length = 329

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 68.4 bits (167), Expect = 1e-12
 Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 23/209 (11%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE--FMTELKIIGRTHHKNLVRLL 553
           +G G  GKV  G      ++  + VK+L +     +E+  F+ E++     +H N+++ L
Sbjct: 3   IGNGWFGKVLLGEAHRGMSKARVVVKEL-RASATPDEQLLFLQEVQPYRELNHPNVLQCL 61

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFL----FHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           G C E    LLV E  P G L N+L        Q         +A  VA GLL+LH   +
Sbjct: 62  GQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---Q 118

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS-KLLNKDQTRTDTNMRGTMGYVAPEW 668
              IH D+  +N  L   T D +   KI D+G++ +   +D   T       + ++APE 
Sbjct: 119 ADFIHSDLALRNCQL---TADLS--VKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPEL 173

Query: 669 -------LRNVPVTTKVDVFSFGVMLLEI 690
                  L     T K +++S GV + E+
Sbjct: 174 VEIRGQDLLPKDQTKKSNIWSLGVTMWEL 202

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 68.6 bits (167), Expect = 1e-12
 Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 17/200 (8%)

Query: 496 VGTGSSGKVYRGILRLKDTQI--EIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +G G+SG V+       D     E+A+K++    +   E  + E+ ++    + N+V  L
Sbjct: 27  IGQGASGTVFTA----IDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFL 82

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
                 D+  +V E +  G+L++ +          Q   +     + L +LH     Q+I
Sbjct: 83  DSFLVGDELFVVMEYLAGGSLTDVVTETCMDEA--QIAAVCRECLQALEFLHA---NQVI 137

Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP 673
           H DIK  NVLL +         K++DFG    +  +Q++  T M GT  ++APE +    
Sbjct: 138 HRDIKSDNVLLGMDG-----SVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKA 191

Query: 674 VTTKVDVFSFGVMLLEIICG 693
              KVD++S G+M +E++ G
Sbjct: 192 YGPKVDIWSLGIMAIEMVEG 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 67.9 bits (166), Expect = 2e-12
 Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 21/209 (10%)

Query: 496 VGTGSSGKVYRGILR-LKDT----QIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLV 550
           +G G+  K+++GI R + D     + E+ +K L+K     +E F     ++ +  HK+LV
Sbjct: 3   LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
              G C   D+ ++V E +  G+L  +L           ++E+A  +A  L +L ++   
Sbjct: 63  LNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK--- 119

Query: 611 QIIHCDIKPQNVLL----DLKTLDTNYMAKISDFGIS-KLLNKDQTRTDTNMRGTMGYVA 665
            + H ++  +NVLL    D KT +  ++ K+SD GIS  +L K+       +   + +V 
Sbjct: 120 GLTHGNVCAKNVLLIREEDRKTGNPPFI-KLSDPGISITVLPKEI------LLERIPWVP 172

Query: 666 PEWLRNVP-VTTKVDVFSFGVMLLEIICG 693
           PE + N   ++   D +SFG  L EI  G
Sbjct: 173 PECIENPQNLSLAADKWSFGTTLWEIFSG 201

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 67.9 bits (166), Expect = 2e-12
 Identities = 54/219 (24%), Positives = 103/219 (47%), Gaps = 32/219 (14%)

Query: 494 KLVGTGSSGK--VYRGILRLKDTQI----EIAVKKLEKDIEKTNEEFMTELKIIGRTHHK 547
           +++G G+ G+  +YR   R +D  +    E+ + +L    EK   + + E+ I+    H 
Sbjct: 6   RVLGKGAFGEATLYR---RTEDDSLVVWKEVNLTRLS---EKERRDALNEIVILSLLQHP 59

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR------PGWVQRVEIALGVARGL 601
           N++       +++  L+  E    GTL + +  +  +        W    +I   V+   
Sbjct: 60  NIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYL-FQIVSAVS--- 115

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            Y+H+     I+H DIK  N+ L    L      K+ DFGISK+L  + +  +T + GT 
Sbjct: 116 -YIHKA---GILHRDIKTLNIFLTKAGL-----IKLGDFGISKILGSEYSMAETVV-GTP 165

Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELS 700
            Y++PE  + V    K D+++ G +L E++  +R  + +
Sbjct: 166 YYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT 204

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 68.4 bits (168), Expect = 2e-12
 Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 38/214 (17%)

Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFM--------TELKIIGRTHH 546
            +G G+ G VY+   R  +T   +A+KK+   +   +EE +          LK +    H
Sbjct: 6   EIGEGAYGTVYKA--RDLNTGRFVALKKVR--VP-LSEEGIPLSTLREIALLKQLESFEH 60

Query: 547 KNLVRLLGFC-----SEEDKRLLVYELMPNGTLSNFLFH---EGQRPGWVQRVEIALGVA 598
            N+VRLL  C       E K  LV+E + +  L+ +L      G  P  ++ +   L   
Sbjct: 61  PNIVRLLDVCHGPRTDRELKLTLVFEHV-DQDLATYLSKCPKPGLPPETIKDLMRQL--L 117

Query: 599 RGLLYLHEECETQIIHCDIKPQNVLL--DLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           RG+ +LH      I+H D+KPQN+L+  D +        KI+DFG++++ + +   T   
Sbjct: 118 RGVDFLHSHR---IVHRDLKPQNILVTSDGQV-------KIADFGLARIYSFEMALTSVV 167

Query: 657 MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
           +  T+ Y APE L      T VD++S G +  E+
Sbjct: 168 V--TLWYRAPEVLLQSSYATPVDMWSVGCIFAEL 199

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 68.3 bits (167), Expect = 2e-12
 Identities = 61/216 (28%), Positives = 105/216 (48%), Gaps = 32/216 (14%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKK--LEKDIEKTNEEFMTELKIIGRTHHK 547
           F K+  +G G+ G VY+   R K T   +A+KK  L+ + E      + E+ ++   +H 
Sbjct: 2   FQKVEKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 59

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVAR-------- 599
           N+V+LL     E+K  LV+E + +  L  F+  +           I L + +        
Sbjct: 60  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM--DASPLS-----GIPLPLIKSYLFQLLQ 111

Query: 600 GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG 659
           GL + H     +++H D+KPQN+L     ++T    K++DFG+++       RT T+   
Sbjct: 112 GLAFCHSH---RVLHRDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYTHEVV 162

Query: 660 TMGYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICGR 694
           T+ Y APE L      +T VD++S G +  E++  R
Sbjct: 163 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 198

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 68.2 bits (167), Expect = 2e-12
 Identities = 59/206 (28%), Positives = 110/206 (53%), Gaps = 22/206 (10%)

Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLE-KDI--EKTNEEFMTELKIIGRTHHKNL 549
            K VGTG+ G+V+  ++R + ++   A+K +   ++   K  +    E +++    H  +
Sbjct: 6   IKTVGTGTFGRVH--LVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFI 63

Query: 550 VRLLGFCSEEDKRLL--VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           +RL  F +E D+R L  + E +P G L ++L + G+          +  V   L YLH +
Sbjct: 64  IRL--FWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVC-ALEYLHSK 120

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              +I++ D+KP+N+LLD          K++DFG +K L +D+T T   + GT  Y+APE
Sbjct: 121 ---EIVYRDLKPENILLD-----KEGHIKLTDFGFAKKL-RDRTWT---LCGTPEYLAPE 168

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            +++      VD ++ G+++ E++ G
Sbjct: 169 VIQSKGHNKAVDWWALGILIYEMLVG 194

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 67.8 bits (166), Expect = 3e-12
 Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 30/210 (14%)

Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKL---EKDIEKTNEE--FMTELKIIGRTHHKNL 549
           L+G G+ G VYRG        + + +  L   + D+     E   +++L+   ++   N+
Sbjct: 8   LIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLR---QSQPPNI 64

Query: 550 VRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL----YL 604
            +  G    +  RL ++ E    G++   +     + G +    I++ + R +L    Y+
Sbjct: 65  TKYYG-SYLKGPRLWIIMEYAEGGSVRTLM-----KAGPIAEKYISV-IIREVLVALKYI 117

Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
           H+     +IH DIK  N+L+   T   N    + DFG++ LLN++ ++  T   GT  ++
Sbjct: 118 HK---VGVIHRDIKAANILV---TNTGNVK--LCDFGVAALLNQNSSKRST-FVGTPYWM 168

Query: 665 APEWLRNVPV-TTKVDVFSFGVMLLEIICG 693
           APE +       TK D++S G+ + E+  G
Sbjct: 169 APEVITEGKYYDTKADIWSLGITIYEMATG 198

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 67.6 bits (165), Expect = 3e-12
 Identities = 73/273 (26%), Positives = 123/273 (45%), Gaps = 32/273 (11%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE-KTNEEFMTELKIIGRTHHKNLV 550
           + +++G G+ G VY+    L  T+  +AVK +  DI  +  ++ M+EL+I+ +     ++
Sbjct: 5   YQEILGHGNGGTVYKAYHLL--TRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYII 62

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
              G    E++  +  E M  G+L  +     + P  V    IA+ V +GL YL      
Sbjct: 63  GFYGAFFVENRISICTEFMDGGSLDVY----RKIPEHVLG-RIAVAVVKGLTYL---WSL 114

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
           +I+H D+KP N+L     ++T    K+ DFG+S  L     +T     GT  Y+APE + 
Sbjct: 115 KILHRDVKPSNML-----VNTRGQVKLCDFGVSTQLVNSIAKTYV---GTNAYMAPERIS 166

Query: 671 NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLV 730
                   DV+S G+  +E+  GR      ++++              S M  + LQ +V
Sbjct: 167 GEQYGIHSDVWSLGISFMELALGR--FPYPQIQKNQG-----------SLMPLQLLQCIV 213

Query: 731 SHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS 763
             DP VL   +  E+       C    P  RP+
Sbjct: 214 DEDPPVLPVGQFSEKFVHFITQCMRKQPKERPA 246

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 67.5 bits (165), Expect = 3e-12
 Identities = 73/279 (26%), Positives = 132/279 (47%), Gaps = 29/279 (10%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V + +  +  T   +A K +         ++ + EL+I+       +V   G
Sbjct: 13  LGAGNGGSVSK-VKHIP-TGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYG 70

Query: 555 FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV-EIALGVARGLLYLHEECETQII 613
               E+   +  E M  G+L       G  P  V+ + +IA+ V  GL YL+     +I+
Sbjct: 71  AFLNENNICMCMEFMDCGSLDRIYKKGG--PIPVEILGKIAVAVVEGLTYLYNV--HRIM 126

Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGIS-KLLNKDQTRTDTNMRGTMGYVAPEWLRNV 672
           H DIKP N+L++     +    K+ DFG+S +L+N   +  DT + GT  Y++PE ++  
Sbjct: 127 HRDIKPSNILVN-----SRGQIKLCDFGVSGELIN---SIADTFV-GTSTYMSPERIQGG 177

Query: 673 PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSH 732
             T K DV+S G+ ++E+  G+     S ++++ ++  + + D ++  ++      L S 
Sbjct: 178 KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILD-LLQQIVQEPPPRLPSS 236

Query: 733 D-PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM 770
           D PE L D         V   C   DP  RP+ +++  M
Sbjct: 237 DFPEDLRD--------FVDA-CLLKDPTERPTPQQLCAM 266

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 68.1 bits (167), Expect = 3e-12
 Identities = 70/232 (30%), Positives = 103/232 (44%), Gaps = 53/232 (22%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF----MTELKIIGRTHHKNL 549
           KL G G+ G+VY+   R   T   +A+KK+    EK  + F    + E+KI+ +  H N+
Sbjct: 15  KL-GEGTFGEVYKA--RQIKTGRVVALKKILMHNEK--DGFPITALREIKILKKLKHPNV 69

Query: 550 VRLLGFCSEE-----DKRLLVYELMP------NGTLSN--FLFHEGQRPGWV-QRVEIAL 595
           V L+    E       KR  VY + P      +G L N      E Q   ++ Q +E   
Sbjct: 70  VPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLE--- 126

Query: 596 GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ----- 650
               G+ YLHE     I+H DIK  N+L     +D   + KI+DFG+++  +        
Sbjct: 127 ----GINYLHEN---HILHRDIKAANIL-----IDNQGILKIADFGLARPYDGPPPNPKG 174

Query: 651 -----TRTDTNMRGTMGYVAPEWL---RNVPVTTKVDVFSFGVMLLEIICGR 694
                TR  TN+  T  Y  PE L   R    TT VD++  G +  E+   R
Sbjct: 175 GGGGGTRKYTNLVVTRWYRPPELLLGERR--YTTAVDIWGIGCVFAEMFTRR 224

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 67.7 bits (165), Expect = 3e-12
 Identities = 66/222 (29%), Positives = 113/222 (50%), Gaps = 18/222 (8%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMT--ELKIIGRTHHKNLV 550
           +++G G  G+V     +++ T    A KKLEK  I+K   E M   E +I+ + + + +V
Sbjct: 6   RVLGKGGFGEVC--ACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVV 63

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEI--ALGVARGLLYLHEEC 608
            L      +D   LV  +M  G L   +++ G  PG+ ++  I  A  +  GL  L  E 
Sbjct: 64  SLAYAYETKDALCLVLTIMNGGDLKFHIYNMGN-PGFDEQRAIFYAAELCCGLEDLQRE- 121

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
             +I++ D+KP+N+LLD    D  ++ +ISD G++  + + +T       GT+GY+APE 
Sbjct: 122 --RIVYRDLKPENILLD----DRGHI-RISDLGLAVQIPEGETVR--GRVGTVGYMAPEV 172

Query: 669 LRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVD 710
           + N   T   D +  G ++ E+I G+      +   + EEVD
Sbjct: 173 INNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVD 214

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 67.7 bits (165), Expect = 4e-12
 Identities = 67/209 (32%), Positives = 104/209 (49%), Gaps = 24/209 (11%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRT-HHKNL 549
           K++G GS GKV+  +  LK T    A+K L+KD+   +++    M E +++     H  L
Sbjct: 1   KMLGKGSFGKVF--LAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 58

Query: 550 VRLLGFCSEEDKRLL--VYELMPNGTLSNFLFH--EGQRPGWVQRVEIALGVARGLLYLH 605
             L  +C+ + K  L  V E +  G L   +FH     +    +    A  +  GL +LH
Sbjct: 59  THL--YCTFQTKENLFFVMEYLNGGDL---MFHIQSCHKFDLPRATFYAAEIICGLQFLH 113

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
            +    I++ D+K  N+LLD     T+   KI+DFG+ K       +T T   GT  Y+A
Sbjct: 114 SK---GIVYRDLKLDNILLD-----TDGHIKIADFGMCKENMLGDAKTCT-FCGTPDYIA 164

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           PE L      T VD +SFGV+L E++ G+
Sbjct: 165 PEILLGQKYNTSVDWWSFGVLLYEMLIGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 67.1 bits (164), Expect = 4e-12
 Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 25/209 (11%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKL---EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K +G G    VY+ I  L    +  A+KK+   E    K  ++ + E+ ++ +  H N++
Sbjct: 8   KKIGKGQFSVVYKAICLLDGRVV--ALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVI 65

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFL--FHEGQRP-----GWVQRVEIALGVARGLLY 603
           + L    E ++  +V EL   G LS  +  F + +R       W   V++       L +
Sbjct: 66  KYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLC----SALEH 121

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           +H +   +I+H DIKP NV +         + K+ D G+ +  +  +T    ++ GT  Y
Sbjct: 122 MHSK---RIMHRDIKPANVFIT-----ATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYY 172

Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEIIC 692
           ++PE +       K D++S G +L E+  
Sbjct: 173 MSPERIHENGYNFKSDIWSLGCLLYEMAA 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 67.3 bits (164), Expect = 6e-12
 Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 23/222 (10%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           F  ++G GS GKV   +   K T    A+K L+KD+   +++    M E +++  +    
Sbjct: 4   FLMVLGKGSFGKVM--LAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPP 61

Query: 549 LVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQ--RPGWVQRVEIALGVARGLLYLH 605
            +  L  C +   RL  V E +  G L   ++   Q  R      V  A  +A GL +LH
Sbjct: 62  FLTQLHSCFQTMDRLYFVMEYVNGGDL---MYQIQQVGRFKEPHAVFYAAEIAIGLFFLH 118

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
            +    II+ D+K  NV+LD     +    KI+DFG+ K    D   T T   GT  Y+A
Sbjct: 119 SK---GIIYRDLKLDNVMLD-----SEGHIKIADFGMCKENMWDGVTTKT-FCGTPDYIA 169

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESE 707
           PE +   P    VD ++FGV+L E++ G+   E    E+E E
Sbjct: 170 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE---GEDEDE 208

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 67.4 bits (164), Expect = 6e-12
 Identities = 54/203 (26%), Positives = 101/203 (49%), Gaps = 14/203 (6%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-NEEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V +  ++ K + + +A K +  +I+     + + EL+++   +   +V   G
Sbjct: 13  LGAGNGGVVTK--VQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 70

Query: 555 FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
               + +  +  E M  G+L   L  E +R       ++++ V RGL YL E+   QI+H
Sbjct: 71  AFYSDGEISICMEHMDGGSLDQVL-KEAKRIPEEILGKVSIAVLRGLAYLREK--HQIMH 127

Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+KP N+L++ +        K+ DFG+S  L      +     GT  Y++PE L+    
Sbjct: 128 RDVKPSNILVNSRG-----EIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERLQGTHY 179

Query: 675 TTKVDVFSFGVMLLEIICGRRHI 697
           + + D++S G+ L+E+  GR  I
Sbjct: 180 SVQSDIWSMGLSLVELAIGRYPI 202

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 67.0 bits (163), Expect = 6e-12
 Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 26/209 (12%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKII-GRTHHKNLVRLLG 554
           +G G+ GKVY+ +   KD  +  AVK L+  I   +EE   E  I+    +H N+V+  G
Sbjct: 30  IGKGTYGKVYK-VTNKKDGSLA-AVKILDP-ISDVDEEIEAEYNILQSLPNHPNVVKFYG 86

Query: 555 FCSEEDKRL-----LVYELMPNGTLSNF---LFHEGQRPGWVQRVEIALGVARGLLYLHE 606
              + DK +     LV EL   G+++     L   GQR        I  G   GL +LH 
Sbjct: 87  MFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN 146

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
               +IIH D+K  N+L     L T    K+ DFG+S  L   + R +T++ GT  ++AP
Sbjct: 147 ---NRIIHRDVKGNNIL-----LTTEGGVKLVDFGVSAQLTSTRLRRNTSV-GTPFWMAP 197

Query: 667 EWLR-----NVPVTTKVDVFSFGVMLLEI 690
           E +      +     + DV+S G+  +E+
Sbjct: 198 EVIACEQQYDYSYDARCDVWSLGITAIEL 226

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 67.5 bits (165), Expect = 7e-12
 Identities = 69/266 (25%), Positives = 123/266 (46%), Gaps = 44/266 (16%)

Query: 448 GVAAIYY---SPAARGLIKRRNY---FDPNSMEINFREFTFQELQEATKGFS--KLVGTG 499
            V A+ Y    PA R      N+   ++  + +I        +L+   + F   K++G G
Sbjct: 2   TVTALVYDCDIPALRKNKNIDNFLSRYEKAAEKIT-------KLRMKAEDFDVIKVIGRG 54

Query: 500 SSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELK-IIGRTHHKNLVRLLGFC 556
           + G+V   ++R K ++   A+K L K   I++++  F  E + I+   + + +V+L    
Sbjct: 55  AFGEVQ--LVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQL--HY 110

Query: 557 SEEDKRLL--VYELMPNGTLSNFLFHEGQRPGWVQ--RVEIALGVARGLLYLHEECETQI 612
           + +D + L  V E MP G L N + +      W +    E+ L +      +H       
Sbjct: 111 AFQDDKYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDA----IHS---MGF 163

Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD-QTRTDTNMRGTMGYVAPEWLRN 671
           IH D+KP N+LLD      +   K++DFG    ++ +   R DT + GT  Y++PE L++
Sbjct: 164 IHRDVKPDNMLLD-----KSGHLKLADFGTCMKMDANGMVRCDTAV-GTPDYISPEVLKS 217

Query: 672 VPVTT----KVDVFSFGVMLLEIICG 693
                    + D +S GV L E++ G
Sbjct: 218 QGGDGYYGRECDWWSVGVFLYEMLVG 243

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 67.0 bits (163), Expect = 8e-12
 Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 29/259 (11%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGR-THHKNL 549
           +++G GS  KV   ++RLK T+   A+K ++K++   +E+     TE  +  + ++H  L
Sbjct: 1   RVIGRGSYAKVL--LVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 58

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR---VEIALGVARGLLYLHE 606
           V L      E +   V E +  G L   +  + + P    R    EI+L     L YLHE
Sbjct: 59  VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----LNYLHE 114

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK--LLNKDQTRTDTNMRGTMGYV 664
                II+ D+K  NVLLD     +    K++D+G+ K  L   D T   +   GT  Y+
Sbjct: 115 R---GIIYRDLKLDNVLLD-----SEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYI 163

Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR 724
           APE LR       VD ++ GV++ E++ GR   +   +   S+  D    D++   +L +
Sbjct: 164 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD---IVGSSDNPDQNTEDYLFQVILEK 220

Query: 725 NLQVLVSHDPEVLSDLERF 743
            +++  S   +  S L+ F
Sbjct: 221 QIRIPRSLSVKAASVLKSF 239

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 65.4 bits (159), Expect = 1e-11
 Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 15/203 (7%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTE--LKIIGRTHHKNL 549
           F ++VG GS G+V   ++R +    +  +KKL        E    E   +++ +  H N+
Sbjct: 4   FVRVVGKGSYGEV--SLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNI 61

Query: 550 VRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEE 607
           V        ED  L +V      G L + L  + G+     Q VE  + +A  L YLHE+
Sbjct: 62  VAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK 121

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               I+H D+K QNV L      TN + K+ D GI+++L ++Q    + + GT  Y++PE
Sbjct: 122 ---HILHRDLKTQNVFLT----RTN-IIKVGDLGIARVL-ENQCDMASTLIGTPYYMSPE 172

Query: 668 WLRNVPVTTKVDVFSFGVMLLEI 690
              N P   K DV++ G  + E+
Sbjct: 173 LFSNKPYNYKSDVWALGCCVYEM 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 65.9 bits (161), Expect = 1e-11
 Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 49/225 (21%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKK--LEKDIEKTNEEFMTELKIIGRTHHK 547
           ++K+  +G G+ G VY+G  R K T   +A+KK  LE + E      + E+ ++    H 
Sbjct: 2   YTKIEKIGEGTYGVVYKG--RNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHP 59

Query: 548 NLVRLLGFCSEEDKRLLVYEL-----------------MPNGTLSNFLFHEGQRPGWVQR 590
           N+V L     +E +  L++E                  M    + ++L+           
Sbjct: 60  NIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQ---------- 109

Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
                 + +G+L+ H     +++H D+KPQN+L+D K +      K++DFG+++      
Sbjct: 110 ------ILQGILFCHSR---RVLHRDLKPQNLLIDNKGV-----IKLADFGLARAFGI-P 154

Query: 651 TRTDTNMRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
            R  T+   T+ Y APE L   P  +T VD++S G +  E+   +
Sbjct: 155 VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKK 199

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 65.5 bits (159), Expect = 1e-11
 Identities = 67/216 (31%), Positives = 112/216 (51%), Gaps = 31/216 (14%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIE-IAVKKLEKDIEKTNEEFMTELKIIGR-THHKNLVR 551
           +LVG G+ G+VY+G   +K  Q+  I V  +  D E   EE   E+ ++ + +HH+N+  
Sbjct: 12  ELVGNGTYGQVYKG-RHVKTGQLAAIKVMDVTGDEE---EEIKQEINMLKKYSHHRNIAT 67

Query: 552 LLG-FCSE-----EDKRLLVYELMPNGTLSNFLFH-EGQ--RPGWVQRVEIALGVARGLL 602
             G F  +     +D+  LV E    G++++ + + +G   +  W+    I   + RGL 
Sbjct: 68  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AYICREILRGLS 125

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           +LH+    ++IH DIK QNVL     L  N   K+ DFG+S  L++   R +T + GT  
Sbjct: 126 HLHQH---KVIHRDIKGQNVL-----LTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPY 176

Query: 663 YVAPEWL---RNVPVTT--KVDVFSFGVMLLEIICG 693
           ++APE +    N   T   K D++S G+  +E+  G
Sbjct: 177 WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 212

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 65.6 bits (160), Expect = 2e-11
 Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 20/205 (9%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK-TNEEFMTELKIIGRTHHKNLVRLLG 554
           +G G+   VY+G  R + T   +A+K++  D E+ T    + E+ ++    H+N+VRL  
Sbjct: 8   LGEGTYATVYKG--RNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHD 65

Query: 555 FCSEEDKRLLVYELMPNGTLSNFLFHEGQR----PGWVQRVEIALGVARGLLYLHEECET 610
               E+K +LV+E M +  L  ++   G R    P  V+     L   +G+ + HE    
Sbjct: 66  VIHTENKLMLVFEYM-DKDLKKYMDTHGVRGALDPNTVKSFTYQL--LKGIAFCHEN--- 119

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
           +++H D+KPQN+L++ +        K++DFG+++        T +N   T+ Y AP+ L 
Sbjct: 120 RVLHRDLKPQNLLINKRG-----ELKLADFGLARAFGI-PVNTFSNEVVTLWYRAPDVLL 173

Query: 671 NVPV-TTKVDVFSFGVMLLEIICGR 694
                +T +D++S G ++ E+I GR
Sbjct: 174 GSRTYSTSIDIWSVGCIMAEMITGR 198

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 65.9 bits (161), Expect = 2e-11
 Identities = 75/252 (29%), Positives = 108/252 (42%), Gaps = 31/252 (12%)

Query: 497 GTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE---FMTELKI---IGRTHHKNLV 550
           G G  GKV   +   K T    A+K L+K      +E    M E +I        H  LV
Sbjct: 8   GRGHFGKVL--LAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLV 65

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
            L      ED    V E    G L   + H        + V  A  V  GL YLHE    
Sbjct: 66  NLFACFQTEDHVCFVMEYAAGGDLMMHI-HTDVFSE-PRAVFYAACVVLGLQYLHEN--- 120

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK--LLNKDQTRTDTNMRGTMGYVAPEW 668
           +I++ D+K  N+LLD +        KI+DFG+ K  +   D+T T     GT  ++APE 
Sbjct: 121 KIVYRDLKLDNLLLDTEG-----FVKIADFGLCKEGMGFGDRTST---FCGTPEFLAPEV 172

Query: 669 LRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVI-SCMLSRN-- 725
           L     T  VD +  GV++ E++ G         ++E E  D +++D V     LSR   
Sbjct: 173 LTETSYTRAVDWWGLGVLIYEMLVGESPF---PGDDEEEVFDSIVNDEVRYPRFLSREAI 229

Query: 726 --LQVLVSHDPE 735
             ++ L+  +PE
Sbjct: 230 SIMRRLLRRNPE 241

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 64.7 bits (157), Expect = 2e-11
 Identities = 63/213 (29%), Positives = 106/213 (49%), Gaps = 26/213 (12%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE--KTNEE---FMTELKIIGRTHHKN 548
           KL+G G+ G+VY  +    DT  E+AVK+++ D E  +T++E      E++++    H+ 
Sbjct: 8   KLLGQGAFGRVY--LCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHER 65

Query: 549 LVRLLGFCSEEDKRLL--VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE 606
           +V+  G   +  +R L    E MP G++ + L   G     V R +    +  G+ YLH 
Sbjct: 66  IVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTR-KYTRQILEGVSYLHS 124

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT--RTDTNMR---GTM 661
                I+H DIK  N+L      D+    K+ DFG SK L   QT   + T M+   GT 
Sbjct: 125 ---NMIVHRDIKGANIL-----RDSVGNVKLGDFGASKRL---QTICLSGTGMKSVTGTP 173

Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +++PE +       K D++S G  ++E++  +
Sbjct: 174 YWMSPEVISGEGYGRKADIWSVGCTVVEMLTEK 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 65.8 bits (161), Expect = 2e-11
 Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 42/216 (19%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT----ELKIIGRTHHKNLVR 551
           VG+G+ G+V         T  ++A+KKL +  +  +         EL+++    H+N++ 
Sbjct: 23  VGSGAYGQVCSAFDTK--TGRKVAIKKLSRPFQ--SAIHAKRTYRELRLLKHMDHENVIG 78

Query: 552 LLG-FC---SEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
           LL  F    S ED +   LV  LM    L+N +    Q+        +   + RGL Y+H
Sbjct: 79  LLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIH 135

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                 IIH D+KP N+      ++ +   KI DFG+++  + + T          GYVA
Sbjct: 136 S---AGIIHRDLKPSNI-----AVNEDCELKILDFGLARHTDDEMT----------GYVA 177

Query: 666 PEWLRNVPV-------TTKVDVFSFGVMLLEIICGR 694
             W R   +          VD++S G ++ E++ G+
Sbjct: 178 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGK 213

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 65.0 bits (158), Expect = 3e-11
 Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 25/209 (11%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKNLV 550
           KL+G G+ GKV   ++R K T    A+K L K++    +E    +TE +++  T H  L 
Sbjct: 1   KLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 58

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG--VARGLLYLHEEC 608
            L       D+   V E    G L    FH  +   + +      G  +   L YLH   
Sbjct: 59  ALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLHSR- 114

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR---GTMGYVA 665
              +++ DIK +N++LD      +   KI+DFG    L K+       M+   GT  Y+A
Sbjct: 115 --DVVYRDIKLENLMLD-----KDGHIKITDFG----LCKEGISDGATMKTFCGTPEYLA 163

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           PE L +      VD +  GV++ E++CGR
Sbjct: 164 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 64.6 bits (157), Expect = 3e-11
 Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 29/215 (13%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR-THHKNLVRL 552
           ++VG G+ G+VY+G   +K  Q+  A  K+    E   EE   E+ ++ + +HH+N+   
Sbjct: 22  EVVGNGTYGQVYKG-RHVKTGQL--AAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATY 78

Query: 553 LGF------CSEEDKRLLVYELMPNGTLSNFLFH-EGQ--RPGWVQRVEIALGVARGLLY 603
            G          +D+  LV E    G++++ + + +G   +  W+    I   + RGL +
Sbjct: 79  YGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWI--AYICREILRGLAH 136

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           LH     ++IH DIK QNVL     L  N   K+ DFG+S  L++   R +T + GT  +
Sbjct: 137 LHAH---KVIHRDIKGQNVL-----LTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYW 187

Query: 664 VAPEWL--RNVPVTT---KVDVFSFGVMLLEIICG 693
           +APE +     P  T   + D++S G+  +E+  G
Sbjct: 188 MAPEVIACDENPDATYDYRSDIWSLGITAIEMAEG 222

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 65.1 bits (159), Expect = 3e-11
 Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 30/207 (14%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE--EFMTELKIIGRTHHKNLVRL 552
           VG G  G+V+  + + KDT   +A+K+++K  + K NE    +TE  I+  T  + LV+L
Sbjct: 9   VGQGGYGQVF--LAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKL 66

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           L    +++   L  E +P G     L       E     ++   E+   V      LHE 
Sbjct: 67  LYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYM--AEMFEAVDA----LHE- 119

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNKDQTRTDTNMRGTMGYVAP 666
                IH D+KP+N L+D          K++DFG+SK ++    +     + G+  Y+AP
Sbjct: 120 --LGYIHRDLKPENFLIDASG-----HIKLTDFGLSKGIVTYANS-----VVGSPDYMAP 167

Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICG 693
           E LR       VD +S G ML E +CG
Sbjct: 168 EVLRGKGYDFTVDYWSLGCMLYEFLCG 194

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 64.0 bits (156), Expect = 4e-11
 Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 25/209 (11%)

Query: 497 GTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE-FMTELKIIGRTHH-KNLVRLLG 554
           G G+ G V +  +R   T   +AVK++   +    ++  + +L I  R+      V   G
Sbjct: 10  GRGAYGVVDK--MRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYG 67

Query: 555 FCSEEDKRLLVYELMPNGTLSNF---LFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
               E    +  E+M + +L  F   ++ +G         +IA+ + + L YLH +    
Sbjct: 68  ALFREGDVWICMEVM-DTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LS 124

Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           +IH D+KP NVL     ++ N   K+ DFGIS  L     +T     G   Y+APE  R 
Sbjct: 125 VIHRDVKPSNVL-----INRNGQVKLCDFGISGYLVDSVAKTID--AGCKPYMAPE--RI 175

Query: 672 VPVTT------KVDVFSFGVMLLEIICGR 694
            P         K DV+S G+ ++E+  GR
Sbjct: 176 NPELNQKGYDVKSDVWSLGITMIELATGR 204

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 65.3 bits (159), Expect = 5e-11
 Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 12/108 (11%)

Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL----LNKDQTRTDTN 656
           LL +H      +IH DIK  N+LL      +N + K+ DFG SK+    ++ D  RT   
Sbjct: 153 LLAVHHVHSKHMIHRDIKSANILLC-----SNGLVKLGDFGFSKMYAATVSDDVGRT--- 204

Query: 657 MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEE 704
             GT  YVAPE  R  P + K D+FS GV+L E++  +R  +   +EE
Sbjct: 205 FCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE 252

Length = 496

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 64.3 bits (156), Expect = 5e-11
 Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 18/206 (8%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKNLV 550
           KL+G G+ GKV   +++ K T    A+K L+K++    +E    +TE +++  + H  L 
Sbjct: 1   KLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLT 58

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG--VARGLLYLHEEC 608
            L       D+   V E    G L    FH  +   + +      G  +   L YLH E 
Sbjct: 59  ALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 115

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
              +++ D+K +N++LD      +   KI+DFG+ K   KD     T   GT  Y+APE 
Sbjct: 116 N--VVYRDLKLENLMLD-----KDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEV 167

Query: 669 LRNVPVTTKVDVFSFGVMLLEIICGR 694
           L +      VD +  GV++ E++CGR
Sbjct: 168 LEDNDYGRAVDWWGLGVVMYEMMCGR 193

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 64.0 bits (156), Expect = 5e-11
 Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 10/103 (9%)

Query: 592 EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT 651
           +I++ V RGL YL E+   +I+H D+KP N+L++     +    K+ DFG+S  L     
Sbjct: 103 KISIAVLRGLTYLREK--HKIMHRDVKPSNILVN-----SRGEIKLCDFGVSGQLIDSMA 155

Query: 652 RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +     GT  Y++PE L+    T + D++S G+ L+E+  GR
Sbjct: 156 NS---FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGR 195

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 63.7 bits (156), Expect = 6e-11
 Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 43/218 (19%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT--ELKIIGR-THHKNLV 550
           K +G G+ G VY    R K+T   +A+KK++K      EE M   E+K + +   H N+V
Sbjct: 5   KQLGDGTFGSVYLA--RNKETGELVAIKKMKKKFYSW-EECMNLREVKSLRKLNEHPNIV 61

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           +L     E D+   V+E M  G L   +     +P        +  V R ++Y       
Sbjct: 62  KLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKP-------FSESVIRSIIY------- 106

Query: 611 QII------------HCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNKDQTRTDTNM 657
           QI+            H D+KP+N+L     +    + KI+DFG+++ + ++      T+ 
Sbjct: 107 QILQGLAHIHKHGFFHRDLKPENLL-----VSGPEVVKIADFGLAREIRSRP---PYTDY 158

Query: 658 RGTMGYVAPE-WLRNVPVTTKVDVFSFGVMLLEIICGR 694
             T  Y APE  LR+   ++ VD+++ G ++ E+   R
Sbjct: 159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLR 196

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 63.7 bits (155), Expect = 6e-11
 Identities = 59/209 (28%), Positives = 98/209 (46%), Gaps = 19/209 (9%)

Query: 494 KLVGTGSSGKVY--RGILRLKDTQIEIAVKKLEKDI----EKTNEEFMTELKIIGRTHHK 547
           +++GTG+ GKV+  R +    D     A+K L+K       KT E   TE +++      
Sbjct: 6   RVLGTGAYGKVFLVRKVGG-HDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRC 64

Query: 548 NLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE 606
             +  L +  + D +L L+ + +  G L   L+          RV IA  +   L +LH+
Sbjct: 65  PFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIA-EIVLALDHLHQ 123

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
                II+ DIK +N+LLD     +     ++DFG+SK    ++     +  GT+ Y+AP
Sbjct: 124 ---LGIIYRDIKLENILLD-----SEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAP 175

Query: 667 EWLRNVPV--TTKVDVFSFGVMLLEIICG 693
           E +R         VD +S GV+  E++ G
Sbjct: 176 EVIRGGSGGHDKAVDWWSLGVLTFELLTG 204

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 63.3 bits (154), Expect = 7e-11
 Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 34/222 (15%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKTNEEFMTELKIIGRTHH-----K 547
           K +  G+ G VY  + + + T    A+K L+K D+   N+  +T +K             
Sbjct: 2   KPISKGAFGSVY--LAKKRSTGDYFAIKVLKKSDMIAKNQ--VTNVKAERAIMMIQGESP 57

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP-GWVQR--VEIALGVARGLLYL 604
            + +L      +D   LV E +  G  ++ +   G  P  W ++   E+ LGV      L
Sbjct: 58  YVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVE----DL 113

Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK--LLNKDQTRTDTNMRGTMG 662
           H+     IIH DIKP+N+L+D     T ++ K++DFG+S+  L NK          GT  
Sbjct: 114 HQR---GIIHRDIKPENLLID----QTGHL-KLTDFGLSRNGLENKK-------FVGTPD 158

Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEE 704
           Y+APE +  V      D +S G ++ E + G         + 
Sbjct: 159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA 200

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 64.1 bits (156), Expect = 7e-11
 Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 19/229 (8%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIG-RTHHKNL 549
           K++G GS GKV      LK T    A+K L+KD+   +++    MTE +I+     H  L
Sbjct: 1   KVLGKGSFGKVMLA--ELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFL 58

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
             L      +D+   V E +  G L  F     ++    +    A  V   L++LH    
Sbjct: 59  TALHCCFQTKDRLFFVMEYVNGGDLM-FQIQRSRKFDEPRSRFYAAEVTLALMFLHRH-- 115

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             +I+ D+K  N+LLD          K++DFG+ K        T T   GT  Y+APE L
Sbjct: 116 -GVIYRDLKLDNILLD-----AEGHCKLADFGMCKE-GILNGVTTTTFCGTPDYIAPEIL 168

Query: 670 RNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVI 718
           + +     VD ++ GV++ E++ G+   E    + E +  + +L D V+
Sbjct: 169 QELEYGPSVDWWALGVLMYEMMAGQPPFE---ADNEDDLFESILHDDVL 214

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 63.8 bits (155), Expect = 7e-11
 Identities = 85/295 (28%), Positives = 123/295 (41%), Gaps = 45/295 (15%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD---IEKTNEEFMTELKIIGRT-HHKNL 549
           K++G GS GKV      LK      AVK L+KD   I+   E  M E +++     +  L
Sbjct: 1   KVLGKGSFGKVLLA--ELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFL 58

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFH--EGQRPGWVQRVEIALGVARGLLYLHEE 607
             L      ++    V E +  G L   +FH  +  R    +    A  +  GL +LH +
Sbjct: 59  THLYCTFQTKEHLFFVMEFLNGGDL---MFHIQDKGRFDLYRATFYAAEIVCGLQFLHSK 115

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               II+ D+K  NV+LD      +   KI+DFG+ K       R  T   GT  Y+APE
Sbjct: 116 ---GIIYRDLKLDNVMLD-----RDGHIKIADFGMCKENVFGDNRAST-FCGTPDYIAPE 166

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEE--ESEEVDIVLSDWVISCMLSRN 725
            L+ +  T  VD +SFGV+L E++ G+        +E  ES  VD       I+      
Sbjct: 167 ILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDI 226

Query: 726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHP---------------DPNLRPSMK 765
           L+ L   DP          R+ +VG    HP               DP  +P +K
Sbjct: 227 LEKLFERDP--------TRRLGVVGNIRGHPFFKTINWTALEKRELDPPFKPKVK 273

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 63.7 bits (155), Expect = 8e-11
 Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 30/226 (13%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGR-THHKNL 549
           +++G GS  KV   ++ LK T+   A+K ++K++   +E+     TE  +    ++H  L
Sbjct: 1   RVIGRGSYAKVL--LVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFL 58

Query: 550 VRLLGFCSEEDKRL-LVYELMPNGTLSNFLFH-EGQR--PGWVQR---VEIALGVARGLL 602
           V L   C + + RL  V E +  G L   +FH + QR  P    R    EI+L     L 
Sbjct: 59  VGLHS-CFQTESRLFFVIEFVSGGDL---MFHMQRQRKLPEEHARFYSAEISLA----LN 110

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           +LHE     II+ D+K  NVLLD          K++D+G+ K   +    T T   GT  
Sbjct: 111 FLHER---GIIYRDLKLDNVLLD-----AEGHIKLTDYGMCKEGIRPGDTTST-FCGTPN 161

Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEE 708
           Y+APE LR       VD ++ GV++ E++ GR   ++  + +  ++
Sbjct: 162 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQ 207

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 63.9 bits (156), Expect = 9e-11
 Identities = 57/213 (26%), Positives = 101/213 (47%), Gaps = 25/213 (11%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +G+G+ G V   I     +  ++A+KK+    D+    +  + ELKI+    H N++ + 
Sbjct: 13  IGSGAYGVVCSAIDTR--SGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIR 70

Query: 554 GFCSEEDKRL----LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG-VARGLLYLHEEC 608
                         +V +LM +    + + H  Q P   + +   L  + RGL Y+H   
Sbjct: 71  DILRPPGADFKDVYVVMDLMESDL--HHIIHSDQ-PLTEEHIRYFLYQLLRGLKYIHSAN 127

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR---GTMGYVA 665
              +IH D+KP N+L     ++ +   +I DFG+++ L+   T     M     T  Y A
Sbjct: 128 ---VIHRDLKPSNLL-----VNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRA 179

Query: 666 PEWLRNVP-VTTKVDVFSFGVMLLEIICGRRHI 697
           PE L ++P  TT +D++S G +  E++ GRR +
Sbjct: 180 PELLLSLPEYTTAIDMWSVGCIFAEML-GRRQL 211

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 63.7 bits (155), Expect = 9e-11
 Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 25/209 (11%)

Query: 494 KLVGTGSSGKVY--RGILRLKDTQIEIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKNL 549
           K++G GS GKV+  R I    D     A+K L+K   K  +   T  E  I+   +H  +
Sbjct: 2   KVLGQGSFGKVFLVRKITG-PDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFI 60

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARGLLYL 604
           V+L      E K  L+ + +  G L        +F E     ++   E+AL     L +L
Sbjct: 61  VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL--AELALA----LDHL 114

Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
           H      II+ D+KP+N+LLD    +  ++ K++DFG+SK  + D  +   +  GT+ Y+
Sbjct: 115 HS---LGIIYRDLKPENILLD----EEGHI-KLTDFGLSKE-SIDHEKKAYSFCGTVEYM 165

Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           APE +     T   D +SFGV++ E++ G
Sbjct: 166 APEVVNRRGHTQSADWWSFGVLMFEMLTG 194

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 63.6 bits (154), Expect = 9e-11
 Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 19/206 (9%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKNLV 550
           KL+G G+ GKV   ++R K +    A+K L+K++    +E    +TE +++  T H  L 
Sbjct: 1   KLLGKGTFGKVI--LVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLT 58

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG--VARGLLYLHEEC 608
            L      +D+   V E +  G L    FH  +   + +      G  +   L YLH   
Sbjct: 59  SLKYSFQTKDRLCFVMEYVNGGEL---FFHLSRERVFSEDRTRFYGAEIVSALDYLHS-- 113

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
             +I++ D+K +N++LD      +   KI+DFG+ K    D     T   GT  Y+APE 
Sbjct: 114 -GKIVYRDLKLENLMLD-----KDGHIKITDFGLCKEGITDAATMKT-FCGTPEYLAPEV 166

Query: 669 LRNVPVTTKVDVFSFGVMLLEIICGR 694
           L +      VD +  GV++ E++CGR
Sbjct: 167 LEDNDYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 63.0 bits (153), Expect = 1e-10
 Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 29/214 (13%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNE-EFMTELKIIGRTHHKNLVRL 552
           K +G G  GKV  G +    T  ++ VK+L        + +F+ E +      H NL++ 
Sbjct: 1   KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQC 60

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR--------PGWVQRVEIALGVARGLLYL 604
           LG C+E    LLV E  P G L  +L     R        P  +QR  +A  +A GLL+L
Sbjct: 61  LGQCTEVTPYLLVMEFCPLGDLKGYL--RSCRKAELMTPDPTTLQR--MACEIALGLLHL 116

Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNMRGTMGY 663
           H+      IH D+  +N L     L  +   KI D+G+S    K D   T   +   + +
Sbjct: 117 HKN---NFIHSDLALRNCL-----LTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRW 168

Query: 664 VAPEWLRNV-------PVTTKVDVFSFGVMLLEI 690
           +APE +  V         T + +V+S GV + E+
Sbjct: 169 IAPELVDEVHGNLLVVDQTKESNVWSLGVTIWEL 202

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 63.5 bits (154), Expect = 1e-10
 Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 16/204 (7%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRT-HHKNL 549
           K++G GS GKV     R  D +   AVK L+K I    K  +  M E  ++ +   H  L
Sbjct: 1   KVIGKGSFGKVLLA-KRKLDGKC-YAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFL 58

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V L       +K   V + +  G L   L  E   P    R   A  +A  L YLH    
Sbjct: 59  VGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAA-EIASALGYLHS--- 114

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I++ D+KP+N+LLD     +     ++DFG+ K     Q+ T T   GT  Y+APE +
Sbjct: 115 INIVYRDLKPENILLD-----SQGHVVLTDFGLCKE-GIAQSDTTTTFCGTPEYLAPEVI 168

Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
           R  P    VD +  G +L E++ G
Sbjct: 169 RKQPYDNTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 63.3 bits (154), Expect = 1e-10
 Identities = 67/222 (30%), Positives = 104/222 (46%), Gaps = 38/222 (17%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD---IEKTNEEFMTELKIIGRTHHKNLV 550
           KL+  G+ G VY  ++R K+T+   A+KK+ K    +    ++   E  I+    +  +V
Sbjct: 7   KLISNGAYGAVY--LVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVV 64

Query: 551 RLLGFCSEEDKRLL--VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            +  FCS E KR L  V E +  G  +  L + G  P  + R+  A  V   L YLH   
Sbjct: 65  SM--FCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVL-ALEYLHN-- 119

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMA--KISDFGISKL-------------LNKDQTR- 652
              I+H D+KP N+L+         M   K++DFG+SK+             + KD TR 
Sbjct: 120 -YGIVHRDLKPDNLLI-------TSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKD-TRE 170

Query: 653 -TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
             D  + GT  Y+APE +        VD ++ G++L E + G
Sbjct: 171 FLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVG 212

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 62.5 bits (152), Expect = 1e-10
 Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 27/212 (12%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKL--EKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           K +G GS GK    +++ K+   +  +K++   K   K  EE   E+ ++    H N+V+
Sbjct: 6   KKIGEGSFGKAI--LVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQ 63

Query: 552 LLGFCSEEDKRLLVYELMPNGTL-------SNFLFHEGQRPGWVQRVEIALGVARGLLYL 604
                 E     +V +    G L          LF E Q   W   V+I L     L ++
Sbjct: 64  YQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWF--VQICLA----LKHV 117

Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
           H+    +I+H DIK QN+ L   T D     K+ DFGI+++LN       T + GT  Y+
Sbjct: 118 HDR---KILHRDIKSQNIFL---TKDG--TIKLGDFGIARVLNSTVELARTCI-GTPYYL 168

Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEIICGRRH 696
           +PE   N P   K D+++ G +L E +C  +H
Sbjct: 169 SPEICENRPYNNKSDIWALGCVLYE-MCTLKH 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 63.5 bits (154), Expect = 1e-10
 Identities = 53/206 (25%), Positives = 104/206 (50%), Gaps = 16/206 (7%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-NEEFMTELKIIGRTHHKN 548
           F K+  +G G+ G V++  +  K + + +A K +  +I+     + + EL+++   +   
Sbjct: 7   FEKISELGAGNGGVVFK--VSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 64

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           +V   G    + +  +  E M  G+L   L   G+ P  +   ++++ V +GL YL E+ 
Sbjct: 65  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREK- 122

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
             +I+H D+KP N+L++ +        K+ DFG+S  L      +     GT  Y++PE 
Sbjct: 123 -HKIMHRDVKPSNILVNSRG-----EIKLCDFGVSGQLIDSMANS---FVGTRSYMSPER 173

Query: 669 LRNVPVTTKVDVFSFGVMLLEIICGR 694
           L+    + + D++S G+ L+E+  GR
Sbjct: 174 LQGTHYSVQSDIWSMGLSLVEMAIGR 199

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 63.1 bits (153), Expect = 1e-10
 Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 19/205 (9%)

Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLE--KDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           +VG G+ G V +   R K+T+  +A+KK +  ++ E+  E  + ELK++     +N+V L
Sbjct: 8   VVGEGAYGVVLK--CRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVEL 65

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHE---GQRPGWVQRVEIALGVARGLLYLHEECE 609
                   K  LV+E +    L   L  E   G  P  V+     L   + + + H+   
Sbjct: 66  KEAFRRRGKLYLVFEYVEKNMLE--LLEEMPNGVPPEKVRSYIYQL--IKAIHWCHK--- 118

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I+H DIKP+N+L+       N + K+ DFG ++ L++      T    T  Y +PE L
Sbjct: 119 NDIVHRDIKPENLLIS-----HNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELL 173

Query: 670 RNVPVTTKVDVFSFGVMLLEIICGR 694
              P    VD++S G +L E+  G+
Sbjct: 174 LGAPYGKAVDMWSVGCILGELSDGQ 198

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 62.8 bits (153), Expect = 1e-10
 Identities = 76/299 (25%), Positives = 128/299 (42%), Gaps = 56/299 (18%)

Query: 493 SKLVGTGSSGKVYRGILR--LKDTQIEIAVKKLEKDIEKTN-EEFMTE-LKIIGRTHHKN 548
           S L+  G+ G+++ GIL       + E+ VK ++    +      + E   + G   H+N
Sbjct: 11  SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYG-LSHQN 69

Query: 549 LVRLLGFCSEE-DKRLLVYELMPNGTLSNFL----FHEGQRPGWV---QRVEIALGVARG 600
           ++ +L  C E+ +   ++Y  M  G L  FL      E   P  +   Q V +A+ +A G
Sbjct: 70  ILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACG 129

Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNKDQTRTDTNMRG 659
           + YLH+     +IH DI  +N ++D          KI+D  +S+ L   D      N   
Sbjct: 130 MSYLHKR---GVIHKDIAARNCVID-----EELQVKITDNALSRDLFPMDYHCLGDNENR 181

Query: 660 TMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC--GRRHIELSRVEEESEEVDIVLSDWV 717
            + ++A E L N   ++  DV+SFGV+L E++      ++E+     +  E+   L D  
Sbjct: 182 PVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEI-----DPFEMAAYLKDGY 236

Query: 718 -----ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML 771
                I+C             P+     E F  MA     C   DP  RPS  +++  L
Sbjct: 237 RLAQPINC-------------PD-----ELFAVMA----CCWALDPEERPSFSQLVQCL 273

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 64.8 bits (158), Expect = 1e-10
 Identities = 59/228 (25%), Positives = 94/228 (41%), Gaps = 40/228 (17%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLV 550
           +L+G G  G+VY            +A+KK+ +D+       + F+ E KI     H  +V
Sbjct: 8   RLIGKGGMGEVYLA--YDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIV 65

Query: 551 RLLGFCSEEDKRLLVYELMP---NGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            +   CS+ D    VY  MP     TL + L    Q+    + +     V   L   H+ 
Sbjct: 66  PVYSICSDGD---PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKI 122

Query: 608 CET-------QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN---KDQTRTDTNM 657
           C T        ++H D+KP N+LL L          I D+G +       +D    D + 
Sbjct: 123 CATIEYVHSKGVLHRDLKPDNILLGLFG-----EVVILDWGAAIFKKLEEEDLLDIDVDE 177

Query: 658 R--------------GTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           R              GT  Y+APE L  VP +   D+++ GV+L +++
Sbjct: 178 RNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQML 225

Length = 932

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 63.1 bits (153), Expect = 1e-10
 Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 22/225 (9%)

Query: 491 GFSKL--------VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIG 542
           GF KL        +G G+   VY+G  +L D  + +   +LE + E      + E+ ++ 
Sbjct: 1   GFGKLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLK 59

Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGL 601
              H N+V L      E    LV+E + +  L  +L   G     +  V++ L  + RGL
Sbjct: 60  DLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNSIN-MHNVKLFLFQLLRGL 117

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            Y H     +++H D+KPQN+L++ +        K++DFG+++      T+T +N   T+
Sbjct: 118 NYCHRR---KVLHRDLKPQNLLINERG-----ELKLADFGLAR-AKSIPTKTYSNEVVTL 168

Query: 662 GYVAPE-WLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEE 705
            Y  P+  L +   +T++D++  G +  E+  GR     S VEE+
Sbjct: 169 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ 213

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 63.5 bits (154), Expect = 1e-10
 Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 21/208 (10%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKNLVR 551
           K++G G+ G+V   ++R K T+   A+K L K   I++++  F  E + I    +   V 
Sbjct: 49  KVIGRGAFGEVQ--LVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 106

Query: 552 LLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
            L +  ++D+ L +V E MP G L N + +      W +        A  +L L      
Sbjct: 107 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWAR-----FYTAEVVLALDAIHSM 161

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD-QTRTDTNMRGTMGYVAPEWL 669
             IH D+KP N+LLD     + ++ K++DFG    +NK+   R DT + GT  Y++PE L
Sbjct: 162 GFIHRDVKPDNMLLD----KSGHL-KLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVL 215

Query: 670 RNVP----VTTKVDVFSFGVMLLEIICG 693
           ++         + D +S GV L E++ G
Sbjct: 216 KSQGGDGYYGRECDWWSVGVFLYEMLVG 243

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 62.4 bits (151), Expect = 1e-10
 Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 26/210 (12%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE--KTNEEFMT---ELKIIGRTHHKN 548
           KL+G G+ G+VY  +    DT  E+A K+++ D E  +T++E      E++++    H+ 
Sbjct: 8   KLLGQGAFGRVY--LCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHER 65

Query: 549 LVRLLGFCSEEDKRLLV--YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE 606
           +V+  G   +  ++ L    E MP G++ + L   G     V R +    +  G+ YLH 
Sbjct: 66  IVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTR-KYTRQILEGMSYLHS 124

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT--RTDTNMR---GTM 661
                I+H DIK  N+L D     +    K+ DFG SK L   QT   + T +R   GT 
Sbjct: 125 ---NMIVHRDIKGANILRD-----SAGNVKLGDFGASKRL---QTICMSGTGIRSVTGTP 173

Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            +++PE +       K DV+S G  ++E++
Sbjct: 174 YWMSPEVISGEGYGRKADVWSLGCTVVEML 203

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 62.7 bits (152), Expect = 1e-10
 Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 21/210 (10%)

Query: 494 KLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDI----EKTNEEFMTELKIIGRTHH 546
           K++GTG+ GKV+  ++R     D+    A+K L+K       KT E   TE +++     
Sbjct: 6   KVLGTGAYGKVF--LVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ 63

Query: 547 KNLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
              +  L +  + D +L L+ + +  G L     H  QR  + ++ E+ +     +L L 
Sbjct: 64  SPFLVTLHYAFQTDTKLHLILDYINGGEL---FTHLSQRERFKEQ-EVQIYSGEIVLALE 119

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
              +  II+ DIK +N+LLD     +N    ++DFG+SK  ++D+     +  GT+ Y+A
Sbjct: 120 HLHKLGIIYRDIKLENILLD-----SNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMA 174

Query: 666 PEWLR--NVPVTTKVDVFSFGVMLLEIICG 693
           P+ +R  +      VD +S GV++ E++ G
Sbjct: 175 PDIVRGGDGGHDKAVDWWSMGVLMYELLTG 204

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 62.3 bits (151), Expect = 2e-10
 Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 20/206 (9%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKII-GRTHHKNLVRLLG 554
           +G G+ GKV++ +L  K+   + AVK L+  I   +EE   E  I+   + H N+V+  G
Sbjct: 26  IGKGTYGKVFK-VLNKKNGS-KAAVKILDP-IHDIDEEIEAEYNILKALSDHPNVVKFYG 82

Query: 555 FCSEEDKR-----LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
              ++D +      LV EL   G++++ +    +R   ++   IA  +   L+ L     
Sbjct: 83  MYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV 142

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
            + IH D+K  N+L     L T    K+ DFG+S  L   + R +T++ GT  ++APE +
Sbjct: 143 NKTIHRDVKGNNIL-----LTTEGGVKLVDFGVSAQLTSTRLRRNTSV-GTPFWMAPEVI 196

Query: 670 R-----NVPVTTKVDVFSFGVMLLEI 690
                 +     + DV+S G+  +E+
Sbjct: 197 ACEQQLDSTYDARCDVWSLGITAIEL 222

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 63.0 bits (154), Expect = 2e-10
 Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 45/220 (20%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKL------EKDIEKTNEE--FMTELKIIGRTHHK 547
           +G G+ G V++ I R   T+  +A+KK+        D ++T  E  F+ EL       H 
Sbjct: 15  LGKGAYGIVWKAIDR--RTKEVVALKKIFDAFRNATDAQRTFREIMFLQELG-----DHP 67

Query: 548 NLVRLLG-FCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVE---IALGVARGLL 602
           N+V+LL    +E DK + LV+E M          H   R   ++ V    I   + + L 
Sbjct: 68  NIVKLLNVIKAENDKDIYLVFEYMETD------LHAVIRANILEDVHKRYIMYQLLKALK 121

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           Y+H      +IH D+KP N+L     L+++   K++DFG+++ L+      +      + 
Sbjct: 122 YIHS---GNVIHRDLKPSNIL-----LNSDCRVKLADFGLARSLS---ELEENPENPVLT 170

Query: 663 -YVAPEWLRNVPV-------TTKVDVFSFGVMLLEIICGR 694
            YVA  W R   +       T  VD++S G +L E++ G+
Sbjct: 171 DYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGK 210

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 62.9 bits (153), Expect = 2e-10
 Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 29/216 (13%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL--- 552
           +G GS+G V+  +    D    +AVKK+     ++ +  + E+KII R  H N+V++   
Sbjct: 13  LGCGSNGLVFSAVDS--DCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEV 70

Query: 553 -----------LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
                      +G  +E +   +V E M    L+N L   G       R+     + RGL
Sbjct: 71  LGPSGSDLTEDVGSLTELNSVYIVQEYM-ETDLANVLEQ-GPLSEEHARL-FMYQLLRGL 127

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG-- 659
            Y+H      ++H D+KP NV ++ + L    + KI DFG++++++   +       G  
Sbjct: 128 KYIHS---ANVLHRDLKPANVFINTEDL----VLKIGDFGLARIVDPHYSHKGYLSEGLV 180

Query: 660 TMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T  Y +P  L +    TK +D+++ G +  E++ G+
Sbjct: 181 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 216

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 62.3 bits (152), Expect = 2e-10
 Identities = 64/236 (27%), Positives = 101/236 (42%), Gaps = 48/236 (20%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKTNE--EFMTELKIIGRTHHKNLV 550
           KL+G G  G+V+  ++RLK T    A+K L+K ++ K N+    +TE +I+    H  L 
Sbjct: 7   KLLGKGDVGRVF--LVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLP 64

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEI----ALGVARGLLYLHE 606
            L      E    LV +  P G L   L    ++PG     E+    A  V   L YLH 
Sbjct: 65  TLYASFQTETYLCLVMDYCPGGELFRLL---QRQPGKCLSEEVARFYAAEVLLALEYLHL 121

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK----------DQTRTDTN 656
                I++ D+KP+N+LL       + M  +SDF +SK  +             +R  + 
Sbjct: 122 L---GIVYRDLKPENILL---HESGHIM--LSDFDLSKQSDVEPPPVSKALRKGSRRSSV 173

Query: 657 MR------------------GTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
                               GT  Y+APE +      + VD ++ G++L E++ G 
Sbjct: 174 NSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGT 229

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 61.9 bits (151), Expect = 2e-10
 Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 18/209 (8%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKK--LEKDIEKTNEEFMTELKIIGRTHHK 547
           + K+  +G G+ G VY+   R K T   +A+KK  LE + E      + E+ ++   +H 
Sbjct: 1   YQKVEKIGEGTYGVVYKA--RDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHP 58

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHE 606
           N+VRLL     E+K  LV+E + +  L  ++            ++  L  + +G+ Y H 
Sbjct: 59  NIVRLLDVVHSENKLYLVFEFL-DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHS 117

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
               +++H D+KPQN+L     +D     K++DFG+++       RT T+   T+ Y AP
Sbjct: 118 H---RVLHRDLKPQNLL-----IDREGALKLADFGLARAFGV-PVRTYTHEVVTLWYRAP 168

Query: 667 EWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
           E L      +T VD++S G +  E++  R
Sbjct: 169 EILLGSRQYSTPVDIWSIGCIFAEMVNRR 197

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 62.0 bits (151), Expect = 3e-10
 Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 43/215 (20%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKL---EKD--IEKTNEEFMTELKIIGRTHHKNLV 550
           +G GS G V++   R ++T   +A+KK    E D  I+K     + E++++ +  H NLV
Sbjct: 9   IGEGSYGVVFK--CRNRETGQIVAIKKFVESEDDPVIKKIA---LREIRMLKQLKHPNLV 63

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWV---QRVEIALGVARGLLYLHE 606
            L+     + K  LV+E        + + +E  + P  V      +I     + + + H+
Sbjct: 64  NLIEVFRRKRKLHLVFEY-----CDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHK 118

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMGYVA 665
                 IH D+KP+N+L     +      K+ DFG +++L       TD        YVA
Sbjct: 119 H---NCIHRDVKPENIL-----ITKQGQIKLCDFGFARILTGPGDDYTD--------YVA 162

Query: 666 PEWLR-------NVPVTTKVDVFSFGVMLLEIICG 693
             W R       +      VDV++ G +  E++ G
Sbjct: 163 TRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTG 197

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 62.1 bits (151), Expect = 3e-10
 Identities = 65/221 (29%), Positives = 102/221 (46%), Gaps = 36/221 (16%)

Query: 479 EFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---M 535
           E  F +L+E        +G GS G VY    R   T   +A+KK+    +++NE++   +
Sbjct: 14  EKLFTDLRE--------IGHGSFGAVYFA--RDVRTNEVVAIKKMSYSGKQSNEKWQDII 63

Query: 536 TELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIA- 594
            E++ + +  H N +   G    E    LV E    G+ S+ L  E  +   +Q VEIA 
Sbjct: 64  KEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDIL--EVHKKP-LQEVEIAA 119

Query: 595 --LGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
              G  +GL YLH       IH DIK  N+L     L      K++DFG + L++   + 
Sbjct: 120 ICHGALQGLAYLHSHER---IHRDIKAGNIL-----LTEPGTVKLADFGSASLVSPANS- 170

Query: 653 TDTNMRGTMGYVAPEWLRNV---PVTTKVDVFSFGVMLLEI 690
                 GT  ++APE +  +       KVDV+S G+  +E+
Sbjct: 171 ----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 62.3 bits (151), Expect = 3e-10
 Identities = 70/266 (26%), Positives = 107/266 (40%), Gaps = 78/266 (29%)

Query: 494 KLVGTGSSGKVYR----GILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKI-IGRTHHK 547
           K++G G+ GKV      GI + K +   +AVK L E      ++  M+ELKI I   +H 
Sbjct: 13  KVLGHGAFGKVVEASAFGIDK-KSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHL 71

Query: 548 NLVRLLGFCSEEDKRLLV-YELMPNGTLSN------------------------------ 576
           N+V LLG C++ +  L+V  E    G LSN                              
Sbjct: 72  NVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQS 131

Query: 577 -----------------FLFHEGQRPGWVQRVE--------------IALGVARGLLYLH 605
                            F           Q  +               +  VARG+ +L 
Sbjct: 132 RVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFL- 190

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT-DTNMRGTMGYV 664
                + IH D+  +N+LL       N + KI DFG+++ + KD       + R  + ++
Sbjct: 191 --ASRKCIHRDLAARNILLS-----ENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWM 243

Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEI 690
           APE + +   TT+ DV+SFGV+L EI
Sbjct: 244 APESIFDKVYTTQSDVWSFGVLLWEI 269

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 61.6 bits (149), Expect = 3e-10
 Identities = 58/212 (27%), Positives = 106/212 (50%), Gaps = 14/212 (6%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+   V++G  +L +  + +   +LE + E      + E+ ++    H N+V L   
Sbjct: 13  LGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKNLKHANIVTLHDI 71

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E    LV+E + +  L  +L + G     +  V+I +  + RGL Y H+    +I+H
Sbjct: 72  IHTERCLTLVFEYLDS-DLKQYLDNCGNLMS-MHNVKIFMFQLLRGLSYCHKR---KILH 126

Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE-WLRNVP 673
            D+KPQN+L++ K        K++DFG+++      T+T +N   T+ Y  P+  L +  
Sbjct: 127 RDLKPQNLLINEKG-----ELKLADFGLAR-AKSVPTKTYSNEVVTLWYRPPDVLLGSTE 180

Query: 674 VTTKVDVFSFGVMLLEIICGRRHIELSRVEEE 705
            +T +D++  G +L E+  GR     S V+EE
Sbjct: 181 YSTPIDMWGVGCILYEMATGRPMFPGSTVKEE 212

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 61.9 bits (151), Expect = 3e-10
 Identities = 65/224 (29%), Positives = 99/224 (44%), Gaps = 52/224 (23%)

Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKNLVRL 552
            +G G+ G V     +   T +++A+KK+    E       T  E+KI+ R  H+N++ +
Sbjct: 12  YIGEGAYGMVCSATHKP--TGVKVAIKKISP-FEHQTFCQRTLREIKILRRFKHENIIGI 68

Query: 553 L------GFCSEEDKRLLVYELMPNG--------TLSN-----FLFHEGQRPGWVQRVEI 593
           L       F S  D   +V ELM            LSN     FL+              
Sbjct: 69  LDIIRPPSFESFNDV-YIVQELMETDLYKLIKTQHLSNDHIQYFLYQ------------- 114

Query: 594 ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL--LNKDQT 651
              + RGL Y+H      ++H D+KP N+L     L+TN   KI DFG++++     D T
Sbjct: 115 ---ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTNCDLKICDFGLARIADPEHDHT 163

Query: 652 RTDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
              T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 164 GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNR 207

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 61.6 bits (149), Expect = 4e-10
 Identities = 66/205 (32%), Positives = 96/205 (46%), Gaps = 18/205 (8%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEE--FMTELKIIGRT-HHKNL 549
           K++G GS GKV   + R K  +   AVK L+K  I K  EE   M+E  ++ +   H  L
Sbjct: 1   KVIGKGSFGKVL--LARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFL 58

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEI-ALGVARGLLYLHEEC 608
           V L       DK   V + +  G L  F   + +R     R    A  +A  L YLH   
Sbjct: 59  VGLHFSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARFYAAEIASALGYLHS-- 114

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
              I++ D+KP+N+LLD     +     ++DFG+ K  N +   T +   GT  Y+APE 
Sbjct: 115 -LNIVYRDLKPENILLD-----SQGHIVLTDFGLCKE-NIEHNGTTSTFCGTPEYLAPEV 167

Query: 669 LRNVPVTTKVDVFSFGVMLLEIICG 693
           L   P    VD +  G +L E++ G
Sbjct: 168 LHKQPYDRTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 61.2 bits (148), Expect = 4e-10
 Identities = 58/210 (27%), Positives = 103/210 (49%), Gaps = 31/210 (14%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFM--------TELKIIGRTHHK 547
           +G G+ GKV++    LK+    +A+K++     +T EE M          L+ +    H 
Sbjct: 9   IGEGAYGKVFKA-RDLKNGGRFVALKRVRV---QTGEEGMPLSTIREVAVLRHLETFEHP 64

Query: 548 NLVRLLGFCS-----EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV--EIALGVARG 600
           N+VRL   C+      E K  LV+E + +  L+ +L  +   PG       ++   + RG
Sbjct: 65  NVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRG 122

Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
           L +LH     +++H D+KPQN+L+      ++   K++DFG++++ +     T   +  T
Sbjct: 123 LDFLHSH---RVVHRDLKPQNILVT-----SSGQIKLADFGLARIYSFQMALTSVVV--T 172

Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
           + Y APE L      T VD++S G +  E+
Sbjct: 173 LWYRAPEVLLQSSYATPVDLWSVGCIFAEM 202

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 61.5 bits (149), Expect = 5e-10
 Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 40/217 (18%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT----ELKIIGRTHHKNL 549
           K VG+G+ G V   + R   T  ++A+KKL +  +  +E F      EL+++    H+N+
Sbjct: 21  KQVGSGAYGTVCSALDR--RTGAKVAIKKLYRPFQ--SELFAKRAYRELRLLKHMKHENV 76

Query: 550 VRLLG-FCSEE--DKRLLVYELMP-NGT-LSNFLFHEGQRPGWVQRVEIALGVARGLLYL 604
           + LL  F  +   D+    Y +MP  GT L   + HE      +Q   +   + +GL Y+
Sbjct: 77  IGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKHEKLSEDRIQF--LVYQMLKGLKYI 134

Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG---TM 661
           H      IIH D+KP N+      ++ +   KI DFG+++       +TD+ M G   T 
Sbjct: 135 HA---AGIIHRDLKPGNL-----AVNEDCELKILDFGLAR-------QTDSEMTGYVVTR 179

Query: 662 GYVAPE----WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            Y APE    W+     T  VD++S G ++ E++ G+
Sbjct: 180 WYRAPEVILNWMH---YTQTVDIWSVGCIMAEMLTGK 213

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 61.4 bits (150), Expect = 5e-10
 Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 65/235 (27%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF----MTELKIIGRTHHKNL 549
           K +G+G+ G V   +   K T  ++A+KK+    +  +       + E+K++    H+N+
Sbjct: 6   KPIGSGAYGVVCSAVD--KRTGRKVAIKKISNVFD--DLIDAKRILREIKLLRHLRHENI 61

Query: 550 VRLLGF----CSEEDKRL-LVYELMP---------NGTLSN-----FLFHEGQRPGWVQR 590
           + LL        E+   + +V ELM             L++     FL+           
Sbjct: 62  IGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKSPQPLTDDHIQYFLYQ---------- 111

Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
                 + RGL YLH      +IH D+KP N+L     +++N   KI DFG+++ ++   
Sbjct: 112 ------ILRGLKYLHS---ANVIHRDLKPSNIL-----VNSNCDLKICDFGLARGVD--- 154

Query: 651 TRTDTNMRGTM-GYVAPEWLRNVPV-------TTKVDVFSFGVMLLEIICGRRHI 697
              D + +G +  YV   W R   +       T  +D++S G +  E++  R+ +
Sbjct: 155 --PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELL-TRKPL 206

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 61.0 bits (148), Expect = 6e-10
 Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 21/210 (10%)

Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVR 551
           LVG G  G+V   ++R K T    A+K ++K +   ++T   F  E  I+  ++   + +
Sbjct: 8   LVGRGHFGEVQ--VVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQ 65

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLF-HEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           L     ++D   LV E  P G L + L  +E Q    + +  +A  V    L +H   + 
Sbjct: 66  LQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELV----LAIHSVHQM 121

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
             +H DIKP+NVL+D     T ++ K++DFG +  L  ++        GT  Y+APE L 
Sbjct: 122 GYVHRDIKPENVLID----RTGHI-KLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLT 176

Query: 671 NVPVTTK------VDVFSFGVMLLEIICGR 694
            +    K       D +S GV+  E+I GR
Sbjct: 177 TMNGDGKGTYGVECDWWSLGVIAYEMIYGR 206

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 61.1 bits (148), Expect = 6e-10
 Identities = 63/205 (30%), Positives = 93/205 (45%), Gaps = 18/205 (8%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRT-HHKNL 549
           K++G GS GKV   + + K      AVK L+K     +K     M E  ++ +   H  L
Sbjct: 1   KVIGKGSFGKVL--LAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFL 58

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEI-ALGVARGLLYLHEEC 608
           V L       +K   V + +  G L  F   + +R     R    A  VA  + YLH   
Sbjct: 59  VGLHYSFQTAEKLYFVLDYVNGGEL--FFHLQRERCFLEPRARFYAAEVASAIGYLHSL- 115

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
              II+ D+KP+N+LLD +         ++DFG+ K   + +  T T   GT  Y+APE 
Sbjct: 116 --NIIYRDLKPENILLDSQG-----HVVLTDFGLCKEGVEPEETTST-FCGTPEYLAPEV 167

Query: 669 LRNVPVTTKVDVFSFGVMLLEIICG 693
           LR  P    VD +  G +L E++ G
Sbjct: 168 LRKEPYDRTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 61.6 bits (149), Expect = 7e-10
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 28/211 (13%)

Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLG 554
           ++G GS G VY  I    DT  ++A+KK+ +D +  N E +    I+   +H N++ L  
Sbjct: 73  IIGNGSFGVVYEAICI--DTSEKVAIKKVLQDPQYKNRELL----IMKNLNHINIIFLKD 126

Query: 555 FCSEEDKRL--------LVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLY 603
           +   E  +         +V E +P  T+  ++ H  +    +    + L    + R L Y
Sbjct: 127 YYYTECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAY 185

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           +H +    I H D+KPQN+L+D  T    +  K+ DFG +K L   Q     +   +  Y
Sbjct: 186 IHSKF---ICHRDLKPQNLLIDPNT----HTLKLCDFGSAKNLLAGQ--RSVSYICSRFY 236

Query: 664 VAPE-WLRNVPVTTKVDVFSFGVMLLEIICG 693
            APE  L     TT +D++S G ++ E+I G
Sbjct: 237 RAPELMLGATNYTTHIDLWSLGCIIAEMILG 267

Length = 440

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 60.3 bits (146), Expect = 7e-10
 Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 36/213 (16%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAV-KKLEKDIEKTNEEFMT--ELKIIGRTHHKNLVRL 552
           +G GS G VY    +    +  + V K++       NE      E +++ +  H  +V+ 
Sbjct: 8   LGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKF 67

Query: 553 LG-------------FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVAR 599
                          +C   D    + EL   G        E Q   W   +++ LGV  
Sbjct: 68  HASFLERDAFCIITEYCEGRDLDCKLEELKHTGKT----LSENQVCEWF--IQLLLGVH- 120

Query: 600 GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG 659
              Y+H+    +I+H D+K +N+ L       N + KI DFG+S+LL        T   G
Sbjct: 121 ---YMHQR---RILHRDLKAKNIFL------KNNLLKIGDFGVSRLL-MGSCDLATTFTG 167

Query: 660 TMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC 692
           T  Y++PE L++    +K D++S G +L E+ C
Sbjct: 168 TPYYMSPEALKHQGYDSKSDIWSLGCILYEMCC 200

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 60.9 bits (148), Expect = 9e-10
 Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 9/97 (9%)

Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR 658
           RGL YLH      I+H DIKP N+L++     +N + KI DFG++++   D+++  T   
Sbjct: 114 RGLKYLHS---AGILHRDIKPGNLLVN-----SNCVLKICDFGLARVEEPDESKHMTQEV 165

Query: 659 GTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
            T  Y APE L      T+ VD++S G +  E++  R
Sbjct: 166 VTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRR 202

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 60.8 bits (147), Expect = 9e-10
 Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 25/241 (10%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKNLV 550
           +++G GS  KV   ++RLK      A+K ++K++   +E+     TE  +  +      +
Sbjct: 1   RVIGRGSYAKVL--LVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFL 58

Query: 551 RLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
             L  C +   RL LV E +  G L   +  + + P    R   A  +   L +LHE   
Sbjct: 59  VGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARF-YAAEICIALNFLHER-- 115

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK--LLNKDQTRTDTNMRGTMGYVAPE 667
             II+ D+K  NVLLD      +   K++D+G+ K  L   D T T     GT  Y+APE
Sbjct: 116 -GIIYRDLKLDNVLLD-----ADGHIKLTDYGMCKEGLGPGDTTST---FCGTPNYIAPE 166

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ 727
            LR       VD ++ GV++ E++ GR   ++      ++  D+   D++   +L + ++
Sbjct: 167 ILRGEEYGFSVDWWALGVLMFEMMAGRSPFDII-----TDNPDMNTEDYLFQVILEKPIR 221

Query: 728 V 728
           +
Sbjct: 222 I 222

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 60.2 bits (146), Expect = 1e-09
 Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 39/222 (17%)

Query: 487 EATKGFSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT--NEEFMTELKIIG 542
           E T  +  L  VG G+ G V     +L  T   +A+KK+ K        +    ELK++ 
Sbjct: 7   EITNRYVDLQPVGMGAFGLVCSARDQL--TGQNVAIKKIMKPFSTPVLAKRTYRELKLLK 64

Query: 543 RTHHKNLVRLLG-FCSEEDKRLLVYELMPNGT-LSNFLFHEGQRPGWVQRVEIALGVARG 600
              H+N++ L   F S  +    V EL+  GT L   L        ++Q       + RG
Sbjct: 65  HLRHENIISLSDIFISPLEDIYFVTELL--GTDLHRLLTSRPLEKQFIQY--FLYQILRG 120

Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG- 659
           L Y+H      ++H D+KP N+L     ++ N   KI DFG++++        D  M G 
Sbjct: 121 LKYVHS---AGVVHRDLKPSNIL-----INENCDLKICDFGLARI-------QDPQMTGY 165

Query: 660 --TMGYVAPE----WLR-NVPVTTKVDVFSFGVMLLEIICGR 694
             T  Y APE    W + +V    +VD++S G +  E++ G+
Sbjct: 166 VSTRYYRAPEIMLTWQKYDV----EVDIWSAGCIFAEMLEGK 203

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 59.6 bits (144), Expect = 2e-09
 Identities = 57/225 (25%), Positives = 108/225 (48%), Gaps = 22/225 (9%)

Query: 491 GFSKL--------VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIG 542
           GF K+        +G G+   V++G  +L +  + +   +LE + E      + E+ ++ 
Sbjct: 1   GFGKMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLK 59

Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGL 601
              H N+V L      +    LV+E + +  L  ++   G     +  V+I L  + RGL
Sbjct: 60  DLKHANIVTLHDIVHTDKSLTLVFEYL-DKDLKQYMDDCGNIMS-MHNVKIFLYQILRGL 117

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            Y H     +++H D+KPQN+L++ +        K++DFG+++      T+T +N   T+
Sbjct: 118 AYCHRR---KVLHRDLKPQNLLINERG-----ELKLADFGLAR-AKSVPTKTYSNEVVTL 168

Query: 662 GYVAPE-WLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEE 705
            Y  P+  L +   +T++D++  G +  E+  GR     S VE+E
Sbjct: 169 WYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE 213

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 60.0 bits (145), Expect = 2e-09
 Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 29/212 (13%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK--DIEKTNEEFMTELK-IIGRTHHKNLV 550
           K++G G+ G+V   ++R K +Q   A+K L K   I++++  F  E + I+   +   +V
Sbjct: 49  KVIGRGAFGEVQ--LVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 106

Query: 551 RLLGFCSEEDKRLL--VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           +L  FC+ +D + L  V E MP G L N + +      W +        A  +L L    
Sbjct: 107 QL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAK-----FYTAEVVLALDAIH 159

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT---RTDTNMRGTMGYVA 665
              +IH D+KP N+L     LD +   K++DFG    +  D+T   R DT + GT  Y++
Sbjct: 160 SMGLIHRDVKPDNML-----LDKHGHLKLADFGTC--MKMDETGMVRCDTAV-GTPDYIS 211

Query: 666 PEWLRNVP----VTTKVDVFSFGVMLLEIICG 693
           PE L++         + D +S GV L E++ G
Sbjct: 212 PEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 243

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 59.5 bits (145), Expect = 2e-09
 Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 42/216 (19%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE--FMT---ELKIIGRTHHKN 548
           K +G G+   VY+   R K+T   +A+KK++    K  ++    T   E+K++    H N
Sbjct: 6   KKLGEGTYAVVYKA--RDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPN 63

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVA---------- 598
           ++ LL     +    LV+E M    L             ++   I L  A          
Sbjct: 64  IIGLLDVFGHKSNINLVFEFME-TDLEKV----------IKDKSIVLTPADIKSYMLMTL 112

Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR 658
           RGL YLH      I+H D+KP N+L     + ++ + K++DFG+++       +  T+  
Sbjct: 113 RGLEYLHSN---WILHRDLKPNNLL-----IASDGVLKLADFGLARSFGSPNRKM-THQV 163

Query: 659 GTMGYVAPEWL---RNVPVTTKVDVFSFGVMLLEII 691
            T  Y APE L   R+      VD++S G +  E++
Sbjct: 164 VTRWYRAPELLFGARH--YGVGVDMWSVGCIFAELL 197

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 58.5 bits (141), Expect = 2e-09
 Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 26/210 (12%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKL--EKDIEKTNEE---FMTELKIIGRTHHKN 548
           KL+G G+ G+VY  +    DT  E+AVK++  + D ++T++E      E++++    H  
Sbjct: 8   KLLGRGAFGEVY--LCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDR 65

Query: 549 LVRLLGFCSE-EDKRLLVY-ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE 606
           +V+  G   + E+K+L ++ E MP G++ + L   G     V R      + +G+ YLH 
Sbjct: 66  IVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTR-RYTRQILQGVSYLHS 124

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT--RTDTNMR---GTM 661
                I+H DIK  N+L      D+    K+ DFG SK +   QT   + T ++   GT 
Sbjct: 125 ---NMIVHRDIKGANIL-----RDSAGNVKLGDFGASKRI---QTICMSGTGIKSVTGTP 173

Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            +++PE +       K DV+S    ++E++
Sbjct: 174 YWMSPEVISGEGYGRKADVWSVACTVVEML 203

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 58.9 bits (142), Expect = 3e-09
 Identities = 70/244 (28%), Positives = 111/244 (45%), Gaps = 44/244 (18%)

Query: 459 RGLIKRRNYFDPNSMEINFR---EFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ 515
           +G++K     DP   ++ ++   E  F  L E        +G GS G VY        T 
Sbjct: 2   KGVVK-----DPEIADLFYKDDPEEIFVGLHE--------IGHGSFGAVY--FATNSHTN 46

Query: 516 IEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG 572
             +AVKK+    ++TNE++   + E+K + +  H N +   G   +E    LV E    G
Sbjct: 47  EVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-G 105

Query: 573 TLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL 629
           + S+ L    ++P  +Q VEIA    G  +GL YLH      +IH DIK  N+LL     
Sbjct: 106 SASDLL-EVHKKP--LQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPG- 158

Query: 630 DTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV---PVTTKVDVFSFGVM 686
                 K++DFG +   +   +       GT  ++APE +  +       KVDV+S G+ 
Sbjct: 159 ----QVKLADFGSASKSSPANS-----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 209

Query: 687 LLEI 690
            +E+
Sbjct: 210 CIEL 213

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 58.8 bits (142), Expect = 4e-09
 Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 26/212 (12%)

Query: 494 KLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEK----DIEKTNEEFMTELKIIGRTHH 546
           K++GTG+ GKV+  ++R     DT    A+K L+K       KT E   TE  ++     
Sbjct: 6   KVLGTGAYGKVF--LVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQ 63

Query: 547 KNLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQ-RVEIALG-VARGLLY 603
              +  L +  + + +L L+ + +  G +   L+   QR  + +  V    G +   L +
Sbjct: 64  SPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLY---QRDNFSEDEVRFYSGEIILALEH 120

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNKDQTRTDTNMRGTMG 662
           LH+     I++ DIK +N+LLD     +     ++DFG+SK  L++++ RT  +  GT+ 
Sbjct: 121 LHK---LGIVYRDIKLENILLD-----SEGHVVLTDFGLSKEFLSEEKERT-YSFCGTIE 171

Query: 663 YVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           Y+APE +R      K VD +S G+++ E++ G
Sbjct: 172 YMAPEIIRGKGGHGKAVDWWSLGILIFELLTG 203

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 58.5 bits (142), Expect = 4e-09
 Identities = 58/231 (25%), Positives = 96/231 (41%), Gaps = 64/231 (27%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKNLVR 551
           K +G G+ G V        +T  ++A+KK+    +   +   T  E+K++    H+N++ 
Sbjct: 11  KPIGRGAYGIVCSAKNS--ETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIA 68

Query: 552 LLGFCSEEDKR-----LLVYELM---------PNGTLSN-----FLFHEGQRPGWVQRVE 592
           +        +       +VYELM          + TLS+     FL+             
Sbjct: 69  IKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQ------------ 116

Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
               + RGL Y+H      ++H D+KP N+L     L+ N   KI DFG++        R
Sbjct: 117 ----LLRGLKYIHS---ANVLHRDLKPSNLL-----LNANCDLKICDFGLA--------R 156

Query: 653 TDTNMRGTMG-YVAPEWLRNVPV-------TTKVDVFSFGVMLLEIICGRR 695
           T +     M  YV   W R   +       TT +DV+S G +  E++ GR+
Sbjct: 157 TTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELL-GRK 206

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family

 Score = 54.6 bits (132), Expect = 4e-09
 Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 9/82 (10%)

Query: 229 FRLTRNVMTPTEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYG 288
           +R+T N        Y R T+   G+ ++F +    S  W   W A  D C V   CG YG
Sbjct: 38  YRMTNN------SIYSRLTLSSEGSLERFTWIP-NSQDWNLFWSAPKDQCDVYGRCGPYG 90

Query: 289 MCTSSDNETVTCNCIPGYTPLN 310
            C  + +    CNCI G+ P N
Sbjct: 91  YCDVNTSP--KCNCIKGFVPKN 110

In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. Length = 110

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 57.7 bits (139), Expect = 5e-09
 Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 21/205 (10%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIA-VKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           K +G G   +VYR    L    + +  V+  E    K  ++ + E+ ++ + +H N+++ 
Sbjct: 8   KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKY 67

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEG-------QRPGWVQRVEIALGVARGLLYLH 605
           L    E+++  +V EL   G LS  + +         +R  W   V++   V     ++H
Sbjct: 68  LDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVE----HMH 123

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                +++H DIKP NV +         + K+ D G+ +  +   T   + + GT  Y++
Sbjct: 124 SR---RVMHRDIKPANVFIT-----ATGVVKLGDLGLGRFFSSKTTAAHS-LVGTPYYMS 174

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEI 690
           PE +       K D++S G +L E+
Sbjct: 175 PERIHENGYNFKSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 57.7 bits (139), Expect = 6e-09
 Identities = 64/287 (22%), Positives = 120/287 (41%), Gaps = 43/287 (14%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DI--EKTNEEFMTELKIIGRTHHKNLV 550
           K +G G   +VYR    L    +  A+KK++  D+   K   + + E+ ++ + +H N++
Sbjct: 8   KKIGRGQFSEVYRATCLLDGVPV--ALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVI 65

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEG-------QRPGWVQRVEIALGVARGLLY 603
           +      E+++  +V EL   G LS  + H         ++  W   V++       L +
Sbjct: 66  KYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQL----CSALEH 121

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           +H     +++H DIKP NV      +    + K+ D G+ +  +   T   + + GT  Y
Sbjct: 122 MHSR---RVMHRDIKPANVF-----ITATGVVKLGDLGLGRFFSSKTTAAHS-LVGTPYY 172

Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS 723
           ++PE +       K D++S G +L E+   +      ++   S    I   D+       
Sbjct: 173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY------- 225

Query: 724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM 770
                     P + SD    E   +V + C +PDP  RP +  V  +
Sbjct: 226 ----------PPLPSDHYSEELRQLVNM-CINPDPEKRPDITYVYDV 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 57.3 bits (138), Expect = 7e-09
 Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 30/213 (14%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQI---EIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLV 550
           ++VG GS G+         D +    EI + K    +E + +E +    ++ +  H N+V
Sbjct: 6   RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAV----LLAKMKHPNIV 61

Query: 551 RLLGFCSEEDKRLLVYELMPNGTL-------SNFLFHEGQRPGWVQRVEIALGVARGLLY 603
                   +    +V E    G L          LF E     W   V++ LGV     +
Sbjct: 62  AFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWF--VQMCLGVQ----H 115

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           +HE+   +++H DIK +N+ L       N   K+ DFG ++LL        T + GT  Y
Sbjct: 116 IHEK---RVLHRDIKSKNIFLT-----QNGKVKLGDFGSARLLTSPGAYACTYV-GTPYY 166

Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRH 696
           V PE   N+P   K D++S G +L E +C  +H
Sbjct: 167 VPPEIWENMPYNNKSDIWSLGCILYE-LCTLKH 198

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 57.3 bits (138), Expect = 9e-09
 Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 32/210 (15%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFM--------TELKIIGRTHHK 547
           +G G+ G VY+   R   +   +A+K +     +TNE+ +          LK +    H 
Sbjct: 8   IGVGAYGTVYKA--RDPHSGHFVALKSVRV---QTNEDGLPLSTVREVALLKRLEAFDHP 62

Query: 548 NLVRLLGFCS-----EEDKRLLVYELMPNGTLSNFLFHEGQRPGW-VQRV-EIALGVARG 600
           N+VRL+  C+      E K  LV+E + +  L  +L  +   PG   + + ++     RG
Sbjct: 63  NIVRLMDVCATSRTDRETKVTLVFEHV-DQDLRTYL-DKVPPPGLPAETIKDLMRQFLRG 120

Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
           L +LH  C   I+H D+KP+N+L+      +    K++DFG++++ +     T   +  T
Sbjct: 121 LDFLHANC---IVHRDLKPENILVT-----SGGQVKLADFGLARIYSCQMALTPVVV--T 170

Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
           + Y APE L      T VD++S G +  E+
Sbjct: 171 LWYRAPEVLLQSTYATPVDMWSVGCIFAEM 200

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 57.5 bits (139), Expect = 9e-09
 Identities = 61/230 (26%), Positives = 96/230 (41%), Gaps = 42/230 (18%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNE-------------EFMT--EL 538
             +G G+ GKV +    L      +A+KK+ K IE +N+              F T  EL
Sbjct: 15  AHLGEGTYGKVEKAYDTLTGK--IVAIKKV-KIIEISNDVTKDRQLVGMCGIHFTTLREL 71

Query: 539 KIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVA 598
           KI+    H+N++ L+    E D   LV ++M    L   +     R    Q   I L + 
Sbjct: 72  KIMNEIKHENIMGLVDVYVEGDFINLVMDIM-ASDLKK-VVDRKIRLTESQVKCILLQIL 129

Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI-------------SKL 645
            GL  LH   +   +H D+ P N+ ++ K +      KI+DFG+             SK 
Sbjct: 130 NGLNVLH---KWYFMHRDLSPANIFINSKGI-----CKIADFGLARRYGYPPYSDTLSKD 181

Query: 646 LNKDQTRTDTNMRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
               +    T+   T+ Y APE L         VD++S G +  E++ G+
Sbjct: 182 ETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231

Length = 335

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 57.9 bits (140), Expect = 9e-09
 Identities = 41/123 (33%), Positives = 58/123 (47%), Gaps = 11/123 (8%)

Query: 467 YFDPNSMEINFR-EFTFQELQEATKGFSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKK 522
           + DP  +  N + EF    LQ     F K +G G+ GKV       L  +D  + +AVK 
Sbjct: 21  FIDPTQLPYNEKWEFPRDNLQ-----FGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKM 75

Query: 523 LEKDIEKTNEE-FMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFH 580
           L+        E  M+ELKI+     HKN+V LLG C+     L++ E    G L NFL  
Sbjct: 76  LKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRK 135

Query: 581 EGQ 583
           + +
Sbjct: 136 KAE 138

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 57.1 bits (138), Expect = 1e-08
 Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 17/199 (8%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKK--LEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +G G+ G V++   + ++T   +A+K+  L+ D E      + E+ ++    HKN+VRL 
Sbjct: 8   IGEGTYGTVFKA--KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLY 65

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQ-RPGWVQRVEIALGVARGLLYLHEECETQI 612
                + K  LV+E         F    G   P  V+     L   +GL + H      +
Sbjct: 66  DVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQL--LKGLAFCHSH---NV 120

Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV 672
           +H D+KPQN+L     ++ N   K++DFG+++       R  +    T+ Y  P+ L   
Sbjct: 121 LHRDLKPQNLL-----INKNGELKLADFGLARAFGI-PVRCYSAEVVTLWYRPPDVLFGA 174

Query: 673 PV-TTKVDVFSFGVMLLEI 690
            + +T +D++S G +  E+
Sbjct: 175 KLYSTSIDMWSAGCIFAEL 193

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 56.6 bits (136), Expect = 2e-08
 Identities = 55/223 (24%), Positives = 111/223 (49%), Gaps = 19/223 (8%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS   VY+G  ++    + + V +L+++ E T    + E  ++    H N+V L   
Sbjct: 13  LGEGSYATVYKGKSKVNGKLVALKVIRLQEE-EGTPFTAIREASLLKGLKHANIVLLHDI 71

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLHEECETQI 612
              ++   LV+E +     ++   +  + PG +    + L    + RGL Y+H+     I
Sbjct: 72  IHTKETLTLVFEYVH----TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR---YI 124

Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE-WLRN 671
           +H D+KPQN+L+     DT  + K++DFG+++      + T +N   T+ Y  P+  L +
Sbjct: 125 LHRDLKPQNLLIS----DTGEL-KLADFGLAR-AKSVPSHTYSNEVVTLWYRPPDVLLGS 178

Query: 672 VPVTTKVDVFSFGVMLLEIICGRRHIE-LSRVEEESEEVDIVL 713
              +T +D++  G + +E+I G      +  ++++ E + +VL
Sbjct: 179 TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVL 221

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 57.0 bits (137), Expect = 2e-08
 Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 32/211 (15%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKNLVRLL 553
           VG+G+ G V         T + +AVKKL +  +       T  EL+++    H+N++ LL
Sbjct: 25  VGSGAYGSVCAAFD--TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 82

Query: 554 GFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
              +      E +   LV  LM    L+N +  +      VQ   +   + RGL Y+H  
Sbjct: 83  DVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF--LIYQILRGLKYIHS- 138

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG---TMGYV 664
               IIH D+KP N+      ++ +   KI DFG+++        TD  M G   T  Y 
Sbjct: 139 --ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYR 184

Query: 665 APEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
           APE + N +     VD++S G ++ E++ GR
Sbjct: 185 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 215

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 55.7 bits (134), Expect = 2e-08
 Identities = 49/208 (23%), Positives = 95/208 (45%), Gaps = 21/208 (10%)

Query: 496 VGTGSSGKVYRGILRLKD----------TQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           +G G+  ++Y GIL  KD           +I++ +K L+      +  F     ++ +  
Sbjct: 3   LGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVS 62

Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
           HK++V L G C  + + ++V E +  G L  F+  +        + ++A  +A  L YL 
Sbjct: 63  HKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLE 122

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNY--MAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           ++    ++H ++  +N+LL  + +D       K+SD GI   +   Q   +      + +
Sbjct: 123 DK---DLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQECVE-----RIPW 174

Query: 664 VAPEWLRNVPV-TTKVDVFSFGVMLLEI 690
           +APE + +    +   D +SFG  L EI
Sbjct: 175 IAPECVEDSKNLSIAADKWSFGTTLWEI 202

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 55.5 bits (134), Expect = 3e-08
 Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 19/206 (9%)

Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLG 554
           L+       +Y+GI   K+  I    KK  K  +   +    E+K + R    N++++ G
Sbjct: 27  LIKENDQNSIYKGIFNNKEVIIR-TFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG 85

Query: 555 FCSEEDKRL----LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           F  +    L    L+ E    G L   L  E +   +  ++++A+   +GL  L++    
Sbjct: 86  FIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYTNK 144

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
              + ++   + L+       NY  KI   G+ K+L+    + + N    M Y + + L 
Sbjct: 145 P--YKNLTSVSFLVT-----ENYKLKIICHGLEKILSSPPFK-NVNF---MVYFSYKMLN 193

Query: 671 NV--PVTTKVDVFSFGVMLLEIICGR 694
           ++    T K D++S GV+L EI  G+
Sbjct: 194 DIFSEYTIKDDIYSLGVVLWEIFTGK 219

Length = 283

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 54.6 bits (131), Expect = 5e-08
 Identities = 69/259 (26%), Positives = 109/259 (42%), Gaps = 40/259 (15%)

Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT--------NEEFMTELKIIGRTHH 546
           ++G G  G+VY    R  DT    A+K L+K   K         NE  M  L   G    
Sbjct: 1   IIGRGGFGEVYG--CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 58

Query: 547 KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEG---QRPGWVQRVEIALGVARGLLY 603
             +V +       DK   + +LM  G L   L   G   ++       EI LG    L +
Sbjct: 59  --IVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILG----LEH 112

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           +H      +++ D+KP N+L     LD +   +ISD G++   +K +        GT GY
Sbjct: 113 MHNRF---VVYRDLKPANIL-----LDEHGHVRISDLGLACDFSKKKPHASV---GTHGY 161

Query: 664 VAPEWL-RNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML 722
           +APE L +     +  D FS G ML +++ G       + +++ E         +    L
Sbjct: 162 MAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE---------IDRMTL 212

Query: 723 SRNLQVLVSHDPEVLSDLE 741
           + N+++  S  PE+ S LE
Sbjct: 213 TVNVELPDSFSPELKSLLE 231

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 54.7 bits (132), Expect = 6e-08
 Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 55/223 (24%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF----MTELKIIGRTHHKNLVR 551
           +G G+ G+V++   R K T+  +A+KK+  + EK  E F    + E+KI+    H+N+V 
Sbjct: 20  IGQGTFGEVFKA--RHKKTKQIVALKKVLMENEK--EGFPITALREIKILQLLKHENVVN 75

Query: 552 LLGFCSEEDKR--------LLVYELMPN---GTLSNFLFHEGQRPGWVQRVEIALGVAR- 599
           L+  C  +            LV+E   +   G LSN            + V+  L   + 
Sbjct: 76  LIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSN------------KNVKFTLSEIKK 123

Query: 600 -------GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK---LLNKD 649
                  GL Y+H     +I+H D+K  N+L     +  + + K++DFG+++   L    
Sbjct: 124 VMKMLLNGLYYIH---RNKILHRDMKAANIL-----ITKDGILKLADFGLARAFSLSKNS 175

Query: 650 QTRTDTNMRGTMGYVAPEWL---RNVPVTTKVDVFSFGVMLLE 689
           +    TN   T+ Y  PE L   R+      +D++  G ++ E
Sbjct: 176 KPNRYTNRVVTLWYRPPELLLGERD--YGPPIDMWGAGCIMAE 216

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 54.8 bits (132), Expect = 6e-08
 Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 28/211 (13%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKK--LEKDIEKTNEEFMTELKIIGRTHHKN-LVRL 552
           +G G+ GKVY+   R K+T   +A+KK  LE D E      + E+ ++        +VRL
Sbjct: 9   IGEGTYGKVYKA--RDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRL 66

Query: 553 LGFCSEEDKR-----LLVYELMPNGTLSNFLFHEGQRPG------WVQRVEIALGVARGL 601
           L     E+K       LV+E + +  L  F+   G+ PG       ++     L   +G+
Sbjct: 67  LDVEHVEEKNGKPSLYLVFEYL-DSDLKKFMDSNGRGPGRPLPAKTIKSFMYQL--LKGV 123

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            + H+     ++H D+KPQN+L+D        + KI+D G+ +  +    ++ T+   T+
Sbjct: 124 AHCHKH---GVMHRDLKPQNLLVD----KQKGLLKIADLGLGRAFSI-PVKSYTHEIVTL 175

Query: 662 GYVAPE-WLRNVPVTTKVDVFSFGVMLLEII 691
            Y APE  L +   +T VD++S G +  E+ 
Sbjct: 176 WYRAPEVLLGSTHYSTPVDIWSVGCIFAEMS 206

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 54.6 bits (131), Expect = 7e-08
 Identities = 51/206 (24%), Positives = 101/206 (49%), Gaps = 20/206 (9%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           + +G GS   VY+GI R+    + + V  ++ + E      + E  ++    H N+V L 
Sbjct: 11  EKLGEGSYATVYKGISRINGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLH 69

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLHEECET 610
                ++    V+E M +  L+ ++    Q PG +    + L    + RGL Y+H +   
Sbjct: 70  DIIHTKETLTFVFEYM-HTDLAQYM---IQHPGGLHPYNVRLFMFQLLRGLAYIHGQ--- 122

Query: 611 QIIHCDIKPQNVLLD-LKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
            I+H D+KPQN+L+  L  L      K++DFG+++      ++T ++   T+ Y  P+ L
Sbjct: 123 HILHRDLKPQNLLISYLGEL------KLADFGLAR-AKSIPSQTYSSEVVTLWYRPPDVL 175

Query: 670 RN-VPVTTKVDVFSFGVMLLEIICGR 694
                 ++ +D++  G + +E++ G+
Sbjct: 176 LGATDYSSALDIWGAGCIFIEMLQGQ 201

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 54.4 bits (131), Expect = 1e-07
 Identities = 66/248 (26%), Positives = 103/248 (41%), Gaps = 60/248 (24%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKTNE--EFMTELKIIGRTHHKNLV 550
           K +G G+ G+V   ++R  DT    A+K L K D+   N+      E  I+    ++ +V
Sbjct: 7   KTIGIGAFGEVC--LVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVV 64

Query: 551 RLLGFCSEEDKRLL--VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           +L  + S +DK  L  V + +P G + + L   G     + R  IA  +   +  +H+  
Sbjct: 65  KL--YYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIA-ELTCAIESVHK-- 119

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI---------SKLLNK-DQTRTDT--- 655
               IH DIKP N+L+D      +   K++DFG+         SK   K D  R D+   
Sbjct: 120 -MGFIHRDIKPDNILIDR-----DGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEP 173

Query: 656 ------------------NMR-----------GTMGYVAPEWLRNVPVTTKVDVFSFGVM 686
                               R           GT  Y+APE L     T   D +S GV+
Sbjct: 174 SEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 233

Query: 687 LLEIICGR 694
           L E++ G+
Sbjct: 234 LYEMLVGQ 241

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 53.9 bits (130), Expect = 1e-07
 Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 12/100 (12%)

Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD---T 655
            GL Y+H      ++H D+KP N+L++      +   KI DFG+++  +++        T
Sbjct: 116 CGLKYIHS---ANVLHRDLKPGNLLVNA-----DCELKICDFGLARGFSENPGENAGFMT 167

Query: 656 NMRGTMGYVAPE-WLRNVPVTTKVDVFSFGVMLLEIICGR 694
               T  Y APE  L     T  +DV+S G +L E++  +
Sbjct: 168 EYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRK 207

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 53.0 bits (127), Expect = 2e-07
 Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 37/222 (16%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN----EEFMTELKIIGRTH------ 545
           +G G+   +Y G LR++        +  ++D          E    LK++  +H      
Sbjct: 3   LGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALA 62

Query: 546 ------------HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHE-GQRP-GWVQRV 591
                       H +L  + G C    + ++V E + +G L   L  E G+ P  W  ++
Sbjct: 63  FFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAW--KI 120

Query: 592 EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL--DTNYMAKISDFGISKLLNKD 649
            +A  +A  L YL ++    ++H ++  +N+LL    L   T+   K+SD G+S      
Sbjct: 121 TVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR 177

Query: 650 QTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEI 690
           + R +      + ++APE +     ++T  D +SFG  LLEI
Sbjct: 178 EERVER-----IPWIAPECVPGGNSLSTAADKWSFGTTLLEI 214

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 53.1 bits (127), Expect = 3e-07
 Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 20/209 (9%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKTNEE--FMTELKIIGRTHHKNLV 550
           K++G G+ G+V   ++++K T+   A+K L K ++ K  E   F  E  ++     + + 
Sbjct: 7   KVIGRGAFGEV--AVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWIT 64

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECE 609
            L     +E+   LV +    G L   L   E + P  + R  IA  V    L +H   +
Sbjct: 65  TLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMV----LAIHSIHQ 120

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
              +H DIKP NVLLD+     N   +++DFG    +N+D T   +   GT  Y++PE L
Sbjct: 121 LHYVHRDIKPDNVLLDM-----NGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEIL 175

Query: 670 RNV-----PVTTKVDVFSFGVMLLEIICG 693
           + +         + D +S GV + E++ G
Sbjct: 176 QAMEDGMGKYGPECDWWSLGVCMYEMLYG 204

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 53.3 bits (128), Expect = 3e-07
 Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 18/199 (9%)

Query: 499 GSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE 558
           GS G+V+       + + ++ VK +     KT      E+ I+    H+ ++ L+     
Sbjct: 103 GSEGEVFVCTKHGDEQRKKVIVKAVTGG--KTPG---REIDILKTISHRAIINLIHAYRW 157

Query: 559 EDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV-EIALGVARGLLYLHEECETQIIHCDI 617
           +     V  +MP      F + +   P  +++   I   +   L YLH      IIH D+
Sbjct: 158 KS---TVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDV 211

Query: 618 KPQNVLLDLKTLDTNYMAKISDFGIS-KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTT 676
           K +N+ LD         A + DFG + KL     T       GT+   +PE L   P   
Sbjct: 212 KTENIFLDEPE-----NAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCA 266

Query: 677 KVDVFSFGVMLLEIICGRR 695
           K D++S G++L E+     
Sbjct: 267 KTDIWSAGLVLFEMSVKNV 285

Length = 392

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 52.2 bits (125), Expect = 4e-07
 Identities = 65/236 (27%), Positives = 100/236 (42%), Gaps = 31/236 (13%)

Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT--------NEEFMTELKIIGRTHH 546
           ++G G  G+VY    R  DT    A+K L+K   K         NE  M  L   G    
Sbjct: 1   IIGRGGFGEVYG--CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 58

Query: 547 KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE 606
             +V +       DK   + +LM  G L    +H  Q  G     E+    A  +L L  
Sbjct: 59  --IVCMSYAFHTPDKLSFILDLMNGGDLH---YHLSQH-GVFSEAEMRFYAAEIILGLEH 112

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
                +++ D+KP N+L     LD +   +ISD G++   +K +        GT GY+AP
Sbjct: 113 MHNRFVVYRDLKPANIL-----LDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMAP 164

Query: 667 EWL-RNVPVTTKVDVFSFGVMLLEIICG----RRHIELSRVEEE--SEEVDIVLSD 715
           E L + V   +  D FS G ML +++ G    R+H    + E +  +  + + L D
Sbjct: 165 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 220

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 52.4 bits (125), Expect = 4e-07
 Identities = 64/214 (29%), Positives = 100/214 (46%), Gaps = 38/214 (17%)

Query: 496 VGTGSSGKV---YRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKNLV 550
           VG+G+ G V   Y   LR K     +AVKKL +  +       T  EL+++    H+N++
Sbjct: 23  VGSGAYGSVCSAYDTRLRQK-----VAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVI 77

Query: 551 RLLGF----CSEED--KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYL 604
            LL       S E+  +  LV  LM    L+N +  +      VQ +   L   RGL Y+
Sbjct: 78  GLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQL--LRGLKYI 134

Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG---TM 661
           H      IIH D+KP NV      ++ +   +I DFG+++       + D  M G   T 
Sbjct: 135 HS---AGIIHRDLKPSNV-----AVNEDCELRILDFGLAR-------QADDEMTGYVATR 179

Query: 662 GYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
            Y APE + N +     VD++S G ++ E++ G+
Sbjct: 180 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGK 213

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 52.0 bits (124), Expect = 5e-07
 Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 30/228 (13%)

Query: 484 ELQEATKGFSKLVGTGSSGKVYRGIL----RLKDTQIEIAVKKLEKDIEKT-NEEFMTEL 538
           E+  +T  F + +G    GKVY+G L      + TQ  +A+K L+   E    EEF  E 
Sbjct: 1   EINLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQ-AVAIKTLKDKAEGPLREEFKHEA 59

Query: 539 KIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGW----------- 587
            +  R  H N+V LLG  ++E    +++    +  L  FL                    
Sbjct: 60  MMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKS 119

Query: 588 ----VQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI- 642
                  V I   +A G+ +L       ++H D+  +NVL+  K        KISD G+ 
Sbjct: 120 TLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDK-----LNVKISDLGLF 171

Query: 643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
            ++   D  +   N    + +++PE +     +   D++S+GV+L E+
Sbjct: 172 REVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEV 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 51.8 bits (124), Expect = 7e-07
 Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 11/118 (9%)

Query: 467 YFDPNSMEINFR-EFTFQELQEATKGFSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKK 522
           Y DP  +  + + EF    L      F K +G G+ GKV       L   D  + +AVK 
Sbjct: 18  YIDPTQLPYDHKWEFPRNRLS-----FGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKM 72

Query: 523 LEKDIEKTNEE-FMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL 578
           L+     T  E  M+ELK++    +H N+V LLG C+     L++ E    G L NFL
Sbjct: 73  LKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFL 130

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 51.8 bits (124), Expect = 8e-07
 Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 9/98 (9%)

Query: 594 ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT 653
           +  VARG+ +L      + IH D+  +N+LL       N + KI DFG+++ + KD    
Sbjct: 179 SFQVARGMEFLASR---KCIHRDLAARNILLS-----ENNVVKICDFGLARDIYKDPDYV 230

Query: 654 DT-NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
              + R  + ++APE + +   TT+ DV+SFGV+L EI
Sbjct: 231 RKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEI 268

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 51.0 bits (123), Expect = 9e-07
 Identities = 54/240 (22%), Positives = 91/240 (37%), Gaps = 69/240 (28%)

Query: 481 TFQELQEATKGFSKL----VGTGSSGKVYRGILRLKDTQ---------------IEIAVK 521
           +  EL +  K    +    +  G  GKV   +L+ K TQ               IE  V 
Sbjct: 5   SLSELVQFLKNCEIVKKLKLIDGKFGKVS--VLKHKPTQKLFVQKIIKAKNFNAIEPMVH 62

Query: 522 KLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHE 581
           +L KD                   + N ++L    +     +L+ + + +G L + L  E
Sbjct: 63  QLMKD-------------------NPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKE 103

Query: 582 GQRPGWVQRVE------IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMA 635
           G       ++       I   +   L  LH+     IIH DIK +NVL D          
Sbjct: 104 G-------KLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYD------RAKD 147

Query: 636 KI--SDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           +I   D+G+ K++      T +   GT+ Y +PE ++        D ++ GV+  E++ G
Sbjct: 148 RIYLCDYGLCKIIG-----TPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTG 202

Length = 267

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 51.4 bits (123), Expect = 9e-07
 Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 41/217 (18%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT----ELKIIGRTHHKNL 549
           K VG+G+ G V   I   K T  ++A+KKL +  +  +E F      EL ++    H+N+
Sbjct: 21  KQVGSGAYGSVCSAID--KRTGEKVAIKKLSRPFQ--SEIFAKRAYRELTLLKHMQHENV 76

Query: 550 VRLLG-FCSEEDKRLL--VYELMPNGTLSNFLFHEGQR----PGWVQRVE-IALGVARGL 601
           + LL  F S          Y +MP      ++  + Q+    P    +V+ +   +  GL
Sbjct: 77  IGLLDVFTSAVSGDEFQDFYLVMP------YMQTDLQKIMGHPLSEDKVQYLVYQMLCGL 130

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG-- 659
            Y+H      IIH D+KP N+      ++ +   KI DFG+++         D  M G  
Sbjct: 131 KYIHS---AGIIHRDLKPGNL-----AVNEDCELKILDFGLAR-------HADAEMTGYV 175

Query: 660 -TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
            T  Y APE + N +     VD++S G ++ E++ G+
Sbjct: 176 VTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGK 212

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 50.9 bits (122), Expect = 1e-06
 Identities = 55/225 (24%), Positives = 91/225 (40%), Gaps = 56/225 (24%)

Query: 494 KLVGTGSSGKV---YRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKN 548
           K +G+G+ G V   Y  +     T   +A+KKL +  +          EL ++   +HKN
Sbjct: 22  KPIGSGAQGIVCAAYDTV-----TGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKN 76

Query: 549 LVRLLGFCSEEDKRL-------LVYELMP------------NGTLSNFLFHEGQRPGWVQ 589
           ++ LL       K L       LV ELM             +  +S  L+          
Sbjct: 77  IIGLLN-VFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQ--------- 126

Query: 590 RVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
                  +  G+ +LH      IIH D+KP N+++      ++   KI DFG+++     
Sbjct: 127 -------MLCGIKHLHS---AGIIHRDLKPSNIVVK-----SDCTLKILDFGLARTAGTS 171

Query: 650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
              T   +  T  Y APE +  +     VD++S G ++ E+I G 
Sbjct: 172 FMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGT 214

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 50.4 bits (121), Expect = 2e-06
 Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 12/161 (7%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT---ELKIIGRTHHKNLVRL 552
           +G G+ G+VY+   +      E A+KK + D E+      +   E+ ++    H+N+V L
Sbjct: 8   IGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSL 67

Query: 553 LG-FCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQR--VEIAL-GVARGLLYLHEE 607
           +  F    DK + L+++   +       FH   +   +    V+  L  +  G+ YLH  
Sbjct: 68  VEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH-- 125

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK 648
               ++H D+KP N+L+ +       + KI D G+++L N 
Sbjct: 126 -SNWVLHRDLKPANILV-MGEGPERGVVKIGDLGLARLFNA 164

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 50.4 bits (120), Expect = 2e-06
 Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 30/182 (16%)

Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT- 655
           VA+G+ +L      + IH D+  +N+LL       N + KI DFG+++ + KD       
Sbjct: 188 VAKGMEFL---ASRKCIHRDLAARNILLS-----ENNVVKICDFGLARDIYKDPDYVRKG 239

Query: 656 NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLS 714
           + R  + ++APE + +   T + DV+SFGV+L EI   G       +++EE         
Sbjct: 240 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--------- 290

Query: 715 DWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT 774
                  L    ++     P+  +  E ++ M    L C H +P+ RP+  +++  L   
Sbjct: 291 ---FCRRLKEGTRM---RAPDYTTP-EMYQTM----LDCWHGEPSQRPTFSELVEHLGNL 339

Query: 775 LE 776
           L+
Sbjct: 340 LQ 341

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 49.3 bits (118), Expect = 4e-06
 Identities = 62/248 (25%), Positives = 96/248 (38%), Gaps = 67/248 (27%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFM-TELKIIGRTHHKNLV 550
           K++G G+ G+V   +++ KDT    A+KKL K   +EK     +  E  I+    +  +V
Sbjct: 7   KVIGRGAFGEVR--LVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVV 64

Query: 551 RLLGFCSEEDKR--LLVYELMPNGTLSNFLF------HEGQRPGWVQRVEIALGVARGLL 602
           +L  + S +D+    L+ E +P G +   L        E  R            +A  +L
Sbjct: 65  KL--YYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETR----------FYIAETIL 112

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-------- 654
            +    +   IH DIKP N+LLD K        K+SDFG+   L K              
Sbjct: 113 AIDSIHKLGYIHRDIKPDNLLLDAKG-----HIKLSDFGLCTGLKKSHRTEFYRILSHAL 167

Query: 655 ----------------------TNMR-------GTMGYVAPEWLRNVPVTTKVDVFSFGV 685
                                  N R       GT  Y+APE         + D +S GV
Sbjct: 168 PSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGV 227

Query: 686 MLLEIICG 693
           ++ E++ G
Sbjct: 228 IMYEMLVG 235

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 48.8 bits (117), Expect = 5e-06
 Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 31/205 (15%)

Query: 499 GSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF-MT---ELKIIGRTHHKNLVRL-- 552
           G+ G VYR   R K T   +A+KKL+  +EK  E F +T   E+ I+ +  H N+V +  
Sbjct: 16  GTYGVVYRA--RDKKTGEIVALKKLK--MEKEKEGFPITSLREINILLKLQHPNIVTVKE 71

Query: 553 --LGFCSEEDKRLLVYELMPN---GTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
             +G  S  DK  +V E + +     +      +      V+ + + L    G+ +LH+ 
Sbjct: 72  VVVG--SNLDKIYMVMEYVEHDLKSLMETM--KQPFLQSEVKCLMLQL--LSGVAHLHDN 125

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               I+H D+K  N+LL+ + +      KI DFG+++       +  T +  T+ Y APE
Sbjct: 126 ---WILHRDLKTSNLLLNNRGI-----LKICDFGLAREYG-SPLKPYTQLVVTLWYRAPE 176

Query: 668 WLRNVPV-TTKVDVFSFGVMLLEII 691
            L      +T +D++S G +  E++
Sbjct: 177 LLLGAKEYSTAIDMWSVGCIFAELL 201

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 49.0 bits (117), Expect = 5e-06
 Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 25/210 (11%)

Query: 494 KLVGTGSSGKVYR-GILRLKDTQIEIAVKKLEKDI----EKTNEEFMTELKIIGRTHHKN 548
           K++G G  GKV++   +   DT    A+K L+K      +K       E  I+    H  
Sbjct: 2   KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPF 61

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLY 603
           +V L+       K  L+ E +  G L   L     F E     ++  + +AL       +
Sbjct: 62  IVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALE------H 115

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           LH++    II+ D+KP+N+L     LD     K++DFG+ K    + T T T   GT+ Y
Sbjct: 116 LHQQ---GIIYRDLKPENIL-----LDAQGHVKLTDFGLCKESIHEGTVTHT-FCGTIEY 166

Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           +APE L        VD +S G ++ +++ G
Sbjct: 167 MAPEILMRSGHGKAVDWWSLGALMYDMLTG 196

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 49.1 bits (117), Expect = 5e-06
 Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 25/164 (15%)

Query: 535 MTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE-----LMP--NGTLSNFLFHEGQRPGW 587
           + E  ++   +H +++R+        K  LV       ++P  +  L  +L    +    
Sbjct: 105 LIEAMLLQNVNHPSVIRM--------KDTLVSGAITCMVLPHYSSDLYTYLTKRSRPLPI 156

Query: 588 VQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
            Q + I   +  GL YLH +   +IIH D+K +N+ ++   +D      I D G ++   
Sbjct: 157 DQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFIN--DVDQ---VCIGDLGAAQFPV 208

Query: 648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
                    + GT+   APE L      +K D++S G++L E++
Sbjct: 209 VAPA--FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEML 250

Length = 357

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 47.6 bits (113), Expect = 1e-05
 Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 20/207 (9%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE-KTNEEFMTELKIIGRTHHKNLVRLLG 554
           +G G  GKV    +        + VK+L+ +   K   EF+ +        H N+++ LG
Sbjct: 3   IGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLG 62

Query: 555 FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEI---ALGVARGLLYLHEECETQ 611
            C E    LLV+E    G L ++L  E       Q + +   A  +A G+ ++H+     
Sbjct: 63  QCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---N 119

Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNMRGTMGYVAPEW-- 668
            +H D+  +N  L   T D     K+ D+GI     K D   T+ +    + ++APE   
Sbjct: 120 FLHSDLALRNCFL---TSDLT--VKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVG 174

Query: 669 -----LRNVPVTTKVDVFSFGVMLLEI 690
                L     T   +V++ GV L E+
Sbjct: 175 EFHGGLITAEQTKPSNVWALGVTLWEL 201

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 47.7 bits (113), Expect = 1e-05
 Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 30/211 (14%)

Query: 494 KLVGTGSSGKVYRGILRLKDT--QIEIAVKKLEKDIEKTN--EEFMTELKIIGRTHHKNL 549
           K +G+G+ G V        DT   I +AVKKL +  +     +    EL ++   +HKN+
Sbjct: 27  KPIGSGAQGIVCAAF----DTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 82

Query: 550 VRLLGFCS-----EEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLL 602
           + LL   +     EE + + LV ELM +  L   +  E       +R+   L  +  G+ 
Sbjct: 83  ISLLNVFTPQKSLEEFQDVYLVMELM-DANLCQVIHMELDH----ERMSYLLYQMLCGIK 137

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           +LH      IIH D+KP N+++      ++   KI DFG+++    +   T   +  T  
Sbjct: 138 HLHS---AGIIHRDLKPSNIVVK-----SDCTLKILDFGLARTACTNFMMTPYVV--TRY 187

Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           Y APE +  +     VD++S G ++ E++ G
Sbjct: 188 YRAPEVILGMGYKENVDIWSVGCIMGELVKG 218

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 48.6 bits (115), Expect = 1e-05
 Identities = 57/230 (24%), Positives = 105/230 (45%), Gaps = 37/230 (16%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQ-----IEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKN 548
           K +G G  G+V+  +++ K TQ       I+ + L+   E+   + + E+ ++    HKN
Sbjct: 19  KKIGNGRFGEVF--LVKHKRTQEFFCWKAISYRGLK---EREKSQLVIEVNVMRELKHKN 73

Query: 549 LVRLLG-FCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE 606
           +VR +  F ++ +++L ++ E    G LS  +    +  G ++   I + + R LL+   
Sbjct: 74  IVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAI-VDITRQLLHALA 132

Query: 607 ECET--------QIIHCDIKPQNVLLDL------------KTLDTNYMAKISDFGISKLL 646
            C          +++H D+KPQN+ L                L+   +AKI DFG+SK  
Sbjct: 133 YCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSK-- 190

Query: 647 NKDQTRTDTNMRGTMGYVAPEWL--RNVPVTTKVDVFSFGVMLLEIICGR 694
           N        +  GT  Y +PE L         K D+++ G ++ E+  G+
Sbjct: 191 NIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGK 240

Length = 1021

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 47.7 bits (113), Expect = 1e-05
 Identities = 63/250 (25%), Positives = 98/250 (39%), Gaps = 60/250 (24%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKL-EKDIEKTNE--EFMTELKIIGRTHHKNLV 550
           K +G G+ G+V   +    DT    A+K L +KD+   N+      E  I+    ++ +V
Sbjct: 7   KTLGIGAFGEVC--LACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVV 64

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           +L     ++D    V + +P G + + L      P  + R  IA       L +    + 
Sbjct: 65  KLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIA----ELTLAIESVHKM 120

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI---------SKLLNK-DQTRTD------ 654
             IH DIKP N+L+DL     +   K++DFG+         SK   K    R D      
Sbjct: 121 GFIHRDIKPDNILIDL-----DGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSD 175

Query: 655 -----TNMR-------------------------GTMGYVAPEWLRNVPVTTKVDVFSFG 684
                +N R                         GT  Y+APE L     T   D +S G
Sbjct: 176 LWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235

Query: 685 VMLLEIICGR 694
           V+L E++ G+
Sbjct: 236 VILFEMLVGQ 245

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 47.3 bits (112), Expect = 2e-05
 Identities = 63/240 (26%), Positives = 96/240 (40%), Gaps = 54/240 (22%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTN-EEFMTELKIIGRTHHKNLV 550
           K++G G+ G+V   +++ KDT    A+K L K   +EK        E  I+       +V
Sbjct: 7   KVIGRGAFGEVR--LVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVV 64

Query: 551 RLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           ++  F S +DKR   L+ E +P G +   L  +      +        +A  +L +    
Sbjct: 65  KM--FYSFQDKRNLYLIMEFLPGGDMMTLLMKKDT----LSEEATQFYIAETVLAIDAIH 118

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-------------- 654
           +   IH DIKP N+LLD K        K+SDFG+   L K   RT+              
Sbjct: 119 QLGFIHRDIKPDNLLLDAKG-----HVKLSDFGLCTGLKKAH-RTEFYRNLTHNPPSDFS 172

Query: 655 -TNMR--------------------GTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
             NM                     GT  Y+APE           D +S GV++ E++ G
Sbjct: 173 FQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 47.3 bits (112), Expect = 2e-05
 Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 29/263 (11%)

Query: 509 LRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL 568
            R  D + ++  K +  + E+      +EL  +    H  +V+       +DK LL+ E 
Sbjct: 87  TRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146

Query: 569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKT 628
              G L+  +    +     Q  E+ L   + +L L E    +++H D+K  N+ L    
Sbjct: 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFL---- 202

Query: 629 LDTNYMAKISDFGISKLLNKDQTRTD--TNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVM 686
           + T  + K+ DFG SK  + D    D  ++  GT  Y+APE       + K D++S GV+
Sbjct: 203 MPTG-IIKLGDFGFSKQYS-DSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVI 260

Query: 687 LLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERM 746
           L E++   R  +     E  ++V     D    C +S  ++ L+  DP +LS        
Sbjct: 261 LYELLTLHRPFKGPSQREIMQQVLYGKYD-PFPCPVSSGMKALL--DP-LLSK------- 309

Query: 747 AMVGLWCNHPDPNLRPSMKKVIH 769
                     +P LRP+ ++++H
Sbjct: 310 ----------NPALRPTTQQLLH 322

Length = 478

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 46.8 bits (111), Expect = 3e-05
 Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 11/96 (11%)

Query: 597 VARGLLYL-HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNKDQTRTD 654
           VA+G+ +L  + C    IH D+  +NVLL         +AKI DFG+++ ++N       
Sbjct: 221 VAQGMDFLASKNC----IHRDVAARNVLLT-----DGRVAKICDFGLARDIMNDSNYVVK 271

Query: 655 TNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
            N R  + ++APE + +   T + DV+S+G++L EI
Sbjct: 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 307

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 46.6 bits (110), Expect = 3e-05
 Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 14/206 (6%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLG- 554
           VG G+ G VY+   +      + A+K++E      +     E+ ++    H N++ L   
Sbjct: 9   VGRGTYGHVYKAKRKDGKDDRDYALKQIEG--TGISMSACREIALLRELKHPNVISLQKV 66

Query: 555 FCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLY-----LHEEC 608
           F S  D+++ L+++   +       FH   +    + V++  G+ + LLY     +H   
Sbjct: 67  FLSHADRKVWLLFDYAEHDLWHIIKFHRASKAN-KKPVQLPRGMVKSLLYQILDGIHYLH 125

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD-QTRTDTN-MRGTMGYVAP 666
              ++H D+KP N+L+  +  +   + KI+D G ++L N   +   D + +  T  Y AP
Sbjct: 126 ANWVLHRDLKPANILVMGEGPERGRV-KIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 184

Query: 667 EWLRNVPVTTK-VDVFSFGVMLLEII 691
           E L      TK +D+++ G +  E++
Sbjct: 185 ELLLGARHYTKAIDIWAIGCIFAELL 210

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 47.0 bits (111), Expect = 3e-05
 Identities = 68/248 (27%), Positives = 112/248 (45%), Gaps = 46/248 (18%)

Query: 463 KRRNYFDPNSMEINFREFT----FQELQEATKGFSKLVGTGSSGKV---YRGILRLKDTQ 515
           KR N F   S+EI    FT    +Q L        K +G+G+ G V   Y  IL     +
Sbjct: 5   KRDNNF--YSVEIGDSTFTVLKRYQNL--------KPIGSGAQGIVCAAYDAIL-----E 49

Query: 516 IEIAVKKLEKDIEKTN--EEFMTELKIIGRTHHKNLVRLLGFCS-----EEDKRL-LVYE 567
             +A+KKL +  +     +    EL ++   +HKN++ LL   +     EE + + +V E
Sbjct: 50  RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME 109

Query: 568 LMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIHCDIKPQNVLLDL 626
           LM +  L   +  E       +R+   L  +  G+ +LH      IIH D+KP N+++  
Sbjct: 110 LM-DANLCQVIQMELDH----ERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVK- 160

Query: 627 KTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVM 686
               ++   KI DFG+++        T   +  T  Y APE +  +     VD++S G +
Sbjct: 161 ----SDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCI 214

Query: 687 LLEIICGR 694
           + E+I G 
Sbjct: 215 MGEMIKGG 222

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 46.2 bits (110), Expect = 3e-05
 Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 45/226 (19%)

Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
            E  K   KL G GS   VY+G  +L    + +   +LE + E      + E  ++    
Sbjct: 4   LETYKKLDKL-GEGSYATVYKGRSKLTGQLVALKEIRLEHE-EGAPFTAIREASLLKDLK 61

Query: 546 HKNLVRLLGFCSEEDKRLLVYELM-----------PNG-TLSN---FLFHEGQRPGWVQR 590
           H N+V L      +    LV+E +             G ++ N   FLF           
Sbjct: 62  HANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQ---------- 111

Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLL-DLKTLDTNYMAKISDFGISKLLNKD 649
                 + RGL Y H+    +++H D+KPQN+L+ +   L      K++DFG+++     
Sbjct: 112 ------LLRGLAYCHQR---RVLHRDLKPQNLLISERGEL------KLADFGLAR-AKSV 155

Query: 650 QTRTDTNMRGTMGYVAPE-WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            ++T +N   T+ Y  P+  L +   +T +D++  G +  E+  GR
Sbjct: 156 PSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGR 201

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 46.5 bits (110), Expect = 4e-05
 Identities = 63/250 (25%), Positives = 102/250 (40%), Gaps = 60/250 (24%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKL-EKDIEKTNE--EFMTELKIIGRTHHKNLV 550
           K +G G+ G+V   + R  DT+   A+K L +KD+   N+      E  I+    ++ +V
Sbjct: 7   KTLGIGAFGEVC--LARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVV 64

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RL     ++D    V + +P G + + L   G  P  + R  IA  +   +  +H+    
Sbjct: 65  RLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIA-ELTCAVESVHK---M 120

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI---------SKLLNK-DQTRTDT----- 655
             IH DIKP N+L     +D +   K++DFG+         SK     D  R D+     
Sbjct: 121 GFIHRDIKPDNIL-----IDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSN 175

Query: 656 -------------------------------NMRGTMGYVAPEWLRNVPVTTKVDVFSFG 684
                                          ++ GT  Y+APE L     T   D +S G
Sbjct: 176 EWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235

Query: 685 VMLLEIICGR 694
           V+L E++ G+
Sbjct: 236 VILYEMLVGQ 245

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 46.2 bits (109), Expect = 4e-05
 Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 20/209 (9%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKTNEE--FMTELKIIGRTHHKNLV 550
           K++G G+ G+V   +++LK+     A+K L K ++ K  E   F  E  ++    ++ + 
Sbjct: 7   KVIGRGAFGEV--AVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWIT 64

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECE 609
            L     +E+   LV +    G L   L   E + P  + R  +A  V    + +    +
Sbjct: 65  TLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMV----IAIDSVHQ 120

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
              +H DIKP N+L+D+     N   +++DFG    L +D T   +   GT  Y++PE L
Sbjct: 121 LHYVHRDIKPDNILMDM-----NGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEIL 175

Query: 670 RNVP-----VTTKVDVFSFGVMLLEIICG 693
           + +         + D +S GV + E++ G
Sbjct: 176 QAMEDGKGKYGPECDWWSLGVCMYEMLYG 204

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 45.1 bits (106), Expect = 9e-05
 Identities = 48/206 (23%), Positives = 95/206 (46%), Gaps = 14/206 (6%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLG- 554
           VG G+ G VY+   +    + E A+K++E      +     E+ ++    H N++ L   
Sbjct: 9   VGRGTYGHVYKAKRKDGKDEKEYALKQIEG--TGISMSACREIALLRELKHPNVIALQKV 66

Query: 555 FCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLY-----LHEEC 608
           F S  D+++ L+++   +       FH   +    + +++   + + LLY     +H   
Sbjct: 67  FLSHSDRKVWLLFDYAEHDLWHIIKFHRASKAN-KKPMQLPRSMVKSLLYQILDGIHYLH 125

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD-QTRTDTN-MRGTMGYVAP 666
              ++H D+KP N+L+ +         KI+D G ++L N   +   D + +  T  Y AP
Sbjct: 126 ANWVLHRDLKPANILV-MGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 184

Query: 667 EWLRNVPVTTK-VDVFSFGVMLLEII 691
           E L      TK +D+++ G +  E++
Sbjct: 185 ELLLGARHYTKAIDIWAIGCIFAELL 210

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 45.2 bits (107), Expect = 9e-05
 Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 59/230 (25%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNE--EFMTELKIIGRTHHKNLVR 551
           +++G GS G V   I     T  ++A+KK+    E  ++    + E+K++    H ++V 
Sbjct: 6   EVIGKGSYGVVCSAIDTH--TGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVE 63

Query: 552 LLGFCSEEDKR-----LLVYELM---------PNGTLSN-----FLFHEGQRPGWVQRVE 592
           +        +R      +V+ELM          N  L+      FL+             
Sbjct: 64  IKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQ------------ 111

Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
               + R L Y+H      + H D+KP+N+L      + +   KI DFG++++   D   
Sbjct: 112 ----LLRALKYIHT---ANVFHRDLKPKNIL-----ANADCKLKICDFGLARVAFND--- 156

Query: 653 TDTNMRGTMGYVAPEWLRNVPV--------TTKVDVFSFGVMLLEIICGR 694
           T T +  T  YVA  W R   +        T  +D++S G +  E++ G+
Sbjct: 157 TPTAIFWT-DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK 205

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 44.9 bits (106), Expect = 1e-04
 Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 28/180 (15%)

Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT-DT 655
           VA+G+ +L  +     IH D+  +N+LL         + KI DFG+++ +  D       
Sbjct: 223 VAKGMSFLASK---NCIHRDLAARNILLT-----HGRITKICDFGLARDIRNDSNYVVKG 274

Query: 656 NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSD 715
           N R  + ++APE + N   T + DV+S+G++L EI        L         VD     
Sbjct: 275 NARLPVKWMAPESIFNCVYTFESDVWSYGILLWEI------FSLGSSPYPGMPVDSKFYK 328

Query: 716 WVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL 775
                M+    ++L    PE  +  E ++ M      C   DP  RP+ K+++ ++E  L
Sbjct: 329 -----MIKEGYRML---SPE-CAPSEMYDIMKS----CWDADPLKRPTFKQIVQLIEQQL 375

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 44.5 bits (105), Expect = 1e-04
 Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 14/97 (14%)

Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQIEIAVKKLEKDIEKTNEE--FMTELKI---IG 542
             K +G G+ GKV +    GI +    +  +AVK L K+    +E    MTELKI   IG
Sbjct: 11  LGKPLGRGAFGKVIQASAFGIEKSASCRT-VAVKML-KEGATASEYKALMTELKILIHIG 68

Query: 543 RTHHKNLVRLLGFCSEEDKRLLV-YELMPNGTLSNFL 578
             HH N+V LLG C++    L+V  E    G LSN+L
Sbjct: 69  --HHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYL 103

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 44.6 bits (106), Expect = 1e-04
 Identities = 51/221 (23%), Positives = 95/221 (42%), Gaps = 61/221 (27%)

Query: 497 GTGSSGKVYRGILRLKDTQIEIAVKKLEK---DIEKTNEEFMTELKIIGR-THHKNLVRL 552
           G G+  +V +   + + T    A+K ++K    +E+ N   + E++ + R + H N++RL
Sbjct: 8   GEGTFSEVLKA--QSRKTGKYYAIKCMKKHFKSLEQVNN--LREIQALRRLSPHPNILRL 63

Query: 553 LGFCSEE-DKRL-LVYELM---------------PNGTLSNFLFHEGQRPGWVQRVEIAL 595
           +    +    RL LV+ELM               P   + ++++                
Sbjct: 64  IEVLFDRKTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQ--------------- 108

Query: 596 GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT 655
            + + L ++H      I H DIKP+N+L+    L      K++DFG  + +      T+ 
Sbjct: 109 -LLKSLDHMHRN---GIFHRDIKPENILIKDDIL------KLADFGSCRGIYSKPPYTE- 157

Query: 656 NMRGTMGYVAPEWLRNVPVTT-----KVDVFSFGVMLLEII 691
               T  Y APE L    +T      K+D+++ G +  EI+
Sbjct: 158 -YISTRWYRAPECL----LTDGYYGPKMDIWAVGCVFFEIL 193

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 44.8 bits (106), Expect = 1e-04
 Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 20/209 (9%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKTNEE--FMTELKIIGRTHHKNLV 550
           K++G G+ G+V   ++++K+T    A+K L K ++ K  E   F  E  ++     + + 
Sbjct: 7   KVIGRGAFGEV--AVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWIT 64

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR-PGWVQRVEIALGVARGLLYLHEECE 609
            L     +E+   LV +    G L   L     R P  + R  +A  V    L +    +
Sbjct: 65  NLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMV----LAIDSVHQ 120

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
              +H DIKP NVLLD      N   +++DFG    L  D T       GT  Y++PE L
Sbjct: 121 LGYVHRDIKPDNVLLDK-----NGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEIL 175

Query: 670 RNVP-----VTTKVDVFSFGVMLLEIICG 693
           + +         + D +S GV + E++ G
Sbjct: 176 QAMEDGKGRYGPECDWWSLGVCMYEMLYG 204

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 44.3 bits (104), Expect = 2e-04
 Identities = 61/239 (25%), Positives = 95/239 (39%), Gaps = 52/239 (21%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE---FMTELKIIGRTHHKNLV 550
           K++G G+ G+V   +++ KDT    A+K L K      E+      E  I+       +V
Sbjct: 7   KVIGRGAFGEVR--LVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVV 64

Query: 551 RLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           ++  F S +DK    L+ E +P G +   L  +      +   E    +A  +L +    
Sbjct: 65  KM--FYSFQDKLNLYLIMEFLPGGDMMTLLMKKDT----LTEEETQFYIAETVLAIDSIH 118

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK----------------DQTR 652
           +   IH DIKP N+LLD K        K+SDFG+   L K                D T 
Sbjct: 119 QLGFIHRDIKPDNLLLDSKG-----HVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTF 173

Query: 653 TDTNMR------------------GTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
            + N +                  GT  Y+APE           D +S GV++ E++ G
Sbjct: 174 QNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 43.9 bits (103), Expect = 2e-04
 Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 43/219 (19%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN--EEFMTELKIIGRTHHKNLVR 551
           K +G+G+ G V      + D  +  A+KKL +  +     +    EL ++   +HKN++ 
Sbjct: 23  KPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNF----LFHEGQRPGWVQRVEIALGVAR-------- 599
           LL                P  +L  F    L  E       Q +++ L   R        
Sbjct: 81  LLNV------------FTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 128

Query: 600 --GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
             G+ +LH      IIH D+KP N+++      ++   KI DFG+++        T   +
Sbjct: 129 LCGIKHLHS---AGIIHRDLKPSNIVVK-----SDCTLKILDFGLARTAGTSFMMTPYVV 180

Query: 658 RGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRH 696
             T  Y APE +  +     VD++S G ++ E++   RH
Sbjct: 181 --TRYYRAPEVILGMGYKENVDIWSVGCIMGEMV---RH 214

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 42.6 bits (100), Expect = 6e-04
 Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 14/113 (12%)

Query: 582 GQRPGWVQRVEIALGVARGLL----YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI 637
           G R   +   ++   VAR LL    Y+H E    IIH DIK +NVL++           +
Sbjct: 251 GARLRPLGLAQVT-AVARQLLSAIDYIHGE---GIIHRDIKTENVLVN-----GPEDICL 301

Query: 638 SDFGISKLLNKD-QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLE 689
            DFG +        T     + GT+   APE L   P T  VD++S G+++ E
Sbjct: 302 GDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFE 354

Length = 461

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 41.5 bits (97), Expect = 0.001
 Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 15/125 (12%)

Query: 570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL 629
           P  T  + L +E     ++  V  +  VA G+ +L  +     +H D+  +NVL+    L
Sbjct: 221 PERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLICEGKL 277

Query: 630 DTNYMAKISDFGISKLLNKDQTRTDTNMRGT----MGYVAPEWLRNVPVTTKVDVFSFGV 685
                 KI DFG+++ + +D        +G+    + ++APE + N   TT  DV+SFG+
Sbjct: 278 -----VKICDFGLARDIMRDSNYIS---KGSTFLPLKWMAPESIFNNLYTTLSDVWSFGI 329

Query: 686 MLLEI 690
           +L EI
Sbjct: 330 LLWEI 334

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 41.5 bits (97), Expect = 0.001
 Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 15/120 (12%)

Query: 467 YFDPNSMEINFR-EFTFQELQEATKGFSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKK 522
           Y DP  +  + R EF    L        +++G+G+ GKV  G    L      +++AVK 
Sbjct: 20  YVDPMQLPYDSRWEFPRDGLV-----LGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKM 74

Query: 523 LEKDIEKTNEE-FMTELKIIGRTH---HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL 578
           L+     + ++  M+ELKI+  TH   H N+V LLG C++     ++ E    G L N+L
Sbjct: 75  LKPTARSSEKQALMSELKIM--THLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYL 132

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 171 STGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTLNNVS 209
           +  +YTL +Q+DGNLVL  Y       W + T    +  
Sbjct: 15  TDSSYTLILQSDGNLVL--YDGNGRVVWSSNTSGKGSGC 51

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 40.0 bits (93), Expect = 0.004
 Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 12/104 (11%)

Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI--SDFGISKLLNKDQ 650
           I   V R + YLHE    +IIH DIK +N+ +       N+   +   DFG +       
Sbjct: 187 IERSVLRAIQYLHE---NRIIHRDIKAENIFI-------NHPGDVCLGDFGAACFPVDIN 236

Query: 651 TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
                   GT+   APE L   P    VD++S G++L E+    
Sbjct: 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCH 280

Length = 391

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	788
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.98
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.98
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.98
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.98
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.98
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.98
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.98
PLN00009	294	cyclin-dependent kinase A; Provisional	99.98
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.98
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.98
PHA02882	294	putative serine/threonine kinase; Provisional	99.98
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.98
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.98
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.98
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.98
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.98
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.98
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.98
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.98
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.98
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.98
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.98
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.97
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.97
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.97
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.97
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.97
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.97
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.97
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.97
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.97
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.97
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.97
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.97
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.97
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.97
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.97
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.97
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.97
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.97
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.97
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.97
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.97
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.97
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.97
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.97
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.97
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.97
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.97
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.96
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.96
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.96
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.96
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.96
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.96
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.96
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.96
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.96
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.96
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.95
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.95
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.95
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.95
KOG1152	772	consensus Signal transduction serine/threonine kin	99.95
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.94
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.94
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.94
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.93
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.93
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.92
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.92
PLN00181	793	protein SPA1-RELATED; Provisional	99.91
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	99.91
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	99.9
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.9
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	99.89
PRK09188	365	serine/threonine protein kinase; Provisional	99.87
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.87
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.86
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	99.85
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.84
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.84
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.84
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.83
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.8
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.79
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.78
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.76
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.74
PRK12274	218	serine/threonine protein kinase; Provisional	99.73
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.72
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.72
PRK10345	210	hypothetical protein; Provisional	99.72
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.68
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.67
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.63
smart00090	237	RIO RIO-like kinase.	99.62
PRK14879	211	serine/threonine protein kinase; Provisional	99.6
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.59
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.59
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.59
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.58
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.5
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.48
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.44
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.44
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.34
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.32
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.23
KOG1243	690	consensus Protein kinase [General function predict	99.2
PF08276	66	PAN_2: PAN-like domain; InterPro: IPR013227 PAN do	99.15
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.04
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.04
cd01098	84	PAN_AP_plant Plant PAN/APPLE-like domain; present	99.02
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.0
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.98
KOG3087	229	consensus Serine/threonine protein kinase [General	98.98
cd00129	80	PAN_APPLE PAN/APPLE-like domain; present in N-term	98.97
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.91
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.9
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.8
COG4248	637	Uncharacterized protein with protein kinase and he	98.74
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.7
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.65
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.6
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.51
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.47
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.31
PRK09902	216	hypothetical protein; Provisional	98.24
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.14
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.0
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.97
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	97.97
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.85
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.84
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.8
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.75
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.71
smart00473	78	PAN_AP divergent subfamily of APPLE domains. Apple	97.69
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	97.6
PF01636	239	APH: Phosphotransferase enzyme family This family	97.56
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	97.56
PLN02876	822	acyl-CoA dehydrogenase	97.52
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.42
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.41
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.26
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.13
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.08
PRK10593	297	hypothetical protein; Provisional	97.04
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	96.93
PRK09550	401	mtnK methylthioribose kinase; Reviewed	96.92
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	96.83
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	96.42
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	96.32
PRK05231	319	homoserine kinase; Provisional	96.11
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	96.1
PLN02236	344	choline kinase	95.98
cd01100	73	APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d	95.92
KOG2268	465	consensus Serine/threonine protein kinase [Signal	95.8
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	95.51
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	95.47
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	95.41
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	95.27
KOG1093	725	consensus Predicted protein kinase (contains TBC a	95.11
KOG2270	520	consensus Serine/threonine protein kinase involved	94.79
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	94.66
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	94.45
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	94.4

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-50  Score=432.17  Aligned_cols=288  Identities=42%  Similarity=0.748  Sum_probs=249.2

Q ss_pred             CCcccCHHHHHHHhhccc--ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEe
Q 047157          476 NFREFTFQELQEATKGFS--KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL  553 (788)
Q Consensus       476 ~~~~~~~~~l~~~t~~~~--~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~  553 (788)
                      ..+.|++.+|.++|.+|+  ..||+|+||.||+|.+.   ++..||||++........++|.+|++++.+++|||||+++
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~---~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~Ll  137 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLS---DGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLL  137 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEEC---CCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEE
Confidence            578899999999999998  69999999999999995   4479999988765432155699999999999999999999


Q ss_pred             eEEecCC-eEEEEEecCCCCCHhHhhhccCC-CCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCC
Q 047157          554 GFCSEED-KRLLVYELMPNGTLSNFLFHEGQ-RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDT  631 (788)
Q Consensus       554 ~~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~  631 (788)
                      |||.+.+ +.+||||||++|+|.++|+.... .++|..|++|+.++|+||+|||+.+.+.||||||||+|||||     +
T Consensus       138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD-----~  212 (361)
T KOG1187|consen  138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD-----E  212 (361)
T ss_pred             EEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC-----C
Confidence            9999998 59999999999999999988766 889999999999999999999999888999999999999999     8


Q ss_pred             CCcEEEeecCCccccCCCCCcccccc-cCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccch
Q 047157          632 NYMAKISDFGISKLLNKDQTRTDTNM-RGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVD  710 (788)
Q Consensus       632 ~~~~kL~Dfg~a~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~  710 (788)
                      ++++||+|||+|+....... ..... .||.+|+|||++..+..+.|+|||||||+|+||+||+++.+....     ...
T Consensus       213 ~~~aKlsDFGLa~~~~~~~~-~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~-----~~~  286 (361)
T KOG1187|consen  213 DFNAKLSDFGLAKLGPEGDT-SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRP-----RGE  286 (361)
T ss_pred             CCCEEccCccCcccCCcccc-ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCC-----ccc
Confidence            99999999999976543111 11112 799999999999999999999999999999999999988875431     122


Q ss_pred             hhhHHHHHHHhhcccccccccCCCC-CcccH-HHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCC
Q 047157          711 IVLSDWVISCMLSRNLQVLVSHDPE-VLSDL-ERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEV  777 (788)
Q Consensus       711 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~-~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~  777 (788)
                      ..+.+|++..+..+.+.+++++... ..... +...++.+++.+|++.+|.+||+|.||+++|+.+...
T Consensus       287 ~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~  355 (361)
T KOG1187|consen  287 LSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL  355 (361)
T ss_pred             ccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence            3378899999999999999988865 33333 6888999999999999999999999999999765543

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-44  Score=363.54  Aligned_cols=257  Identities=28%  Similarity=0.403  Sum_probs=213.7

Q ss_pred             cCHHHHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEec
Q 047157          480 FTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE  558 (788)
Q Consensus       480 ~~~~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~  558 (788)
                      ++..||+.     .+.||+|..|+||+++++  .+++.+|+|.+... .....+++.+|+++++..+||+||++||.|..
T Consensus        76 i~~~dle~-----~~~lG~G~gG~V~kv~Hk--~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~  148 (364)
T KOG0581|consen   76 ISLSDLER-----LGVLGSGNGGTVYKVRHK--PTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS  148 (364)
T ss_pred             cCHHHhhh-----hhhcccCCCcEEEEEEEc--CCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence            45555543     468999999999999998  88899999999433 35667899999999999999999999999999


Q ss_pred             CC-eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhh-ccCCceEecCCCCCcEEeccCCCCCCCcEE
Q 047157          559 ED-KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE-ECETQIIHCDIKPQNVLLDLKTLDTNYMAK  636 (788)
Q Consensus       559 ~~-~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~~~~~~~~~k  636 (788)
                      .. ...|+||||++|+|++++... ++.++...-+|+.++++||.|||+ +   +||||||||+|||++     ..+.+|
T Consensus       149 ~~~~isI~mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvN-----skGeVK  219 (364)
T KOG0581|consen  149 NGEEISICMEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVN-----SKGEVK  219 (364)
T ss_pred             CCceEEeehhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeec-----cCCCEE
Confidence            88 599999999999999999654 668899999999999999999996 5   999999999999998     889999


Q ss_pred             EeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHH
Q 047157          637 ISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDW  716 (788)
Q Consensus       637 L~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~  716 (788)
                      |+|||.+..+.+.   ....+.||..|||||.+.+..|+.++||||||+.++|+.+|+.|+......   ......+   
T Consensus       220 icDFGVS~~lvnS---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~---~~~~~~L---  290 (364)
T KOG0581|consen  220 ICDFGVSGILVNS---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP---YLDIFEL---  290 (364)
T ss_pred             eccccccHHhhhh---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCC---CCCHHHH---
Confidence            9999999987654   334578999999999999999999999999999999999999999764110   0000111   


Q ss_pred             HHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          717 VISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       717 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                               +..++...+.........+++..++..||+.||.+||+++|++++
T Consensus       291 ---------l~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  291 ---------LCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             ---------HHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                     122333233333333677889999999999999999999999863

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=5.3e-44  Score=381.49  Aligned_cols=252  Identities=32%  Similarity=0.507  Sum_probs=206.9

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCC-eEEEEEecC
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED-KRLLVYELM  569 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~lV~e~~  569 (788)
                      .+.||+|+||+||+|.++   ....||||++....  ....++|.+|+.+|.+++|||||+++|+|.+.. ..+|||||+
T Consensus        46 ~~~iG~G~~g~V~~~~~~---g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~  122 (362)
T KOG0192|consen   46 EEVLGSGSFGTVYKGKWR---GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYM  122 (362)
T ss_pred             hhhcccCCceeEEEEEeC---CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeC
Confidence            456999999999999985   44349999997543  222679999999999999999999999999988 799999999


Q ss_pred             CCCCHhHhhhc-cCCCCCHHHHHHHHHHHHHHHHHhhhccCCc-eEecCCCCCcEEeccCCCCCCC-cEEEeecCCcccc
Q 047157          570 PNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQ-IIHCDIKPQNVLLDLKTLDTNY-MAKISDFGISKLL  646 (788)
Q Consensus       570 ~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~-ivH~dlkp~NIll~~~~~~~~~-~~kL~Dfg~a~~~  646 (788)
                      ++|+|.++++. ....+++..+++++.|||+||.|||++   + ||||||||+|||++     .+. ++||+|||+++..
T Consensus       123 ~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~-----~~~~~~KI~DFGlsr~~  194 (362)
T KOG0192|consen  123 PGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVD-----LKGKTLKIADFGLSREK  194 (362)
T ss_pred             CCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEc-----CCCCEEEECCCccceee
Confidence            99999999988 478899999999999999999999999   7 99999999999999     665 9999999999876


Q ss_pred             CCCCCcccccccCCccccCccccc--CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLR--NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~--~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .... ...+...||+.|||||++.  ..+++.|+|||||||++|||+||+.||.......        .   +.......
T Consensus       195 ~~~~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~--------~---~~~v~~~~  262 (362)
T KOG0192|consen  195 VISK-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQ--------V---ASAVVVGG  262 (362)
T ss_pred             cccc-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHH--------H---HHHHHhcC
Confidence            5432 2333468999999999999  6699999999999999999999999998653211        0   11111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                               .....+......+..++.+||+.||++||++.+++..|+.+..
T Consensus       263 ---------~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~  305 (362)
T KOG0192|consen  263 ---------LRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS  305 (362)
T ss_pred             ---------CCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence                     1111111256678889999999999999999999999986654

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4e-44  Score=382.97  Aligned_cols=248  Identities=27%  Similarity=0.400  Sum_probs=212.9

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      .+|...+.||+|||+.+|+++..  .++..||+|++.+..   ....+.+.+|+++.+.|+|||||+++++|++.+..||
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~--~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYi   95 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDL--DTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYI   95 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEc--CCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEE
Confidence            45677899999999999999886  678899999997643   4567789999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |+|+|++++|.++++ ..+.+++.++..+++||+.||.|||++   +|+|||||..|++++     ++.++||+|||+|.
T Consensus        96 vLELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~-----~~~~VKIgDFGLAt  166 (592)
T KOG0575|consen   96 VLELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLN-----ENMNVKIGDFGLAT  166 (592)
T ss_pred             EEEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhc---Cceecccchhheeec-----CcCcEEecccceee
Confidence            999999999999996 568899999999999999999999999   999999999999998     89999999999999


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .+..+.... .+.+||+.|+|||++.....+..+||||+||++|.||+|++||+.....+....+.            ..
T Consensus       167 ~le~~~Erk-~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik------------~~  233 (592)
T KOG0575|consen  167 QLEYDGERK-KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIK------------LN  233 (592)
T ss_pred             eecCccccc-ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHH------------hc
Confidence            887665444 34899999999999999999999999999999999999999998765443322111            00


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                                +...+.....+..+||..+|++||.+|||+++|+.
T Consensus       234 ----------~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  234 ----------EYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             ----------CcccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                      11111133456678999999999999999999996

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=9.8e-44  Score=362.61  Aligned_cols=206  Identities=31%  Similarity=0.496  Sum_probs=182.6

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      |.+.+.||+|+|++||+|+++  ..+..||||.+.+.  ..+..+.+..|+.+|+.++|||||++++++..++..+||||
T Consensus        12 y~~~~~iG~GsfavVykg~h~--~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME   89 (429)
T KOG0595|consen   12 YELSREIGSGSFAVVYKGRHK--KSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME   89 (429)
T ss_pred             ceehhhccCcceEEEEEeEec--cCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence            455677999999999999998  56689999999776  56777889999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCC-CCCCCcEEEeecCCcccc
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKT-LDTNYMAKISDFGISKLL  646 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~-~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||.+|+|.+|++.+ ..+++.....++.|||.||++||++   +||||||||+||||+... ......+||+|||+|+.+
T Consensus        90 yC~gGDLs~yi~~~-~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L  165 (429)
T KOG0595|consen   90 YCNGGDLSDYIRRR-GRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL  165 (429)
T ss_pred             eCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence            99999999999766 4789999999999999999999999   999999999999998542 111268999999999988


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVE  703 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~  703 (788)
                      ....  ...+.+|++-|||||++...+|+.|+|+||+|+|||++++|+.||+.....
T Consensus       166 ~~~~--~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~  220 (429)
T KOG0595|consen  166 QPGS--MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK  220 (429)
T ss_pred             Cchh--HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH
Confidence            7433  334579999999999999999999999999999999999999999865443

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.7e-44  Score=364.02  Aligned_cols=257  Identities=25%  Similarity=0.337  Sum_probs=207.1

Q ss_pred             HHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHH-------HHHHHHHHHHHhcCCCccccceEeeEEec
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK-------TNEEFMTELKIIGRTHHKNLVRLLGFCSE  558 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~-------~~~~~~~E~~~l~~l~hpniv~~~~~~~~  558 (788)
                      .+..|-+.+.||+|+||.|-+|..+  .+++.||||++.+....       ......+|+++|++|+|||||+++++++.
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~--~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~  247 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEK--KTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV  247 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEc--ccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec
Confidence            3455677899999999999999887  78889999999754321       22346799999999999999999999999


Q ss_pred             CCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEe
Q 047157          559 EDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS  638 (788)
Q Consensus       559 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~  638 (788)
                      .+..|+||||++||.|.+.+..+ +.+.+.....++.|++.|+.|||++   ||+||||||+|||+..+.  ++..+||+
T Consensus       248 ~ds~YmVlE~v~GGeLfd~vv~n-k~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~--e~~llKIt  321 (475)
T KOG0615|consen  248 PDSSYMVLEYVEGGELFDKVVAN-KYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDA--EDCLLKIT  321 (475)
T ss_pred             CCceEEEEEEecCccHHHHHHhc-cccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCC--cceEEEec
Confidence            99999999999999999999665 5566777788999999999999999   999999999999998554  56899999


Q ss_pred             ecCCccccCCCCCcccccccCCccccCcccccCCC--CC-ccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHH
Q 047157          639 DFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP--VT-TKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSD  715 (788)
Q Consensus       639 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s-~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~  715 (788)
                      |||+|+....  ...+.+.+||+.|.|||++.++.  +. .|.|+||+||+||-+++|..||........          
T Consensus       322 DFGlAK~~g~--~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s----------  389 (475)
T KOG0615|consen  322 DFGLAKVSGE--GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS----------  389 (475)
T ss_pred             ccchhhcccc--ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc----------
Confidence            9999998763  33445689999999999997654  33 378999999999999999999975432221          


Q ss_pred             HHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          716 WVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       716 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                       ...++..+.+.      .......+..++..++|.+||..||++|||+.|+++
T Consensus       390 -l~eQI~~G~y~------f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  390 -LKEQILKGRYA------FGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             -HHHHHhcCccc------ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence             11111122111      011223456788999999999999999999999986

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.8e-44  Score=346.38  Aligned_cols=259  Identities=23%  Similarity=0.320  Sum_probs=212.0

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEee-EEecCCe-E
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLG-FCSEEDK-R  562 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~-~~~~~~~-~  562 (788)
                      .+.|.+.++||+|.||+||++...  .++..||.|.+.-.  ..+....+..|+.+|++|+|||||++++ -+.++++ +
T Consensus        18 l~~y~Il~~IG~GsFg~vykv~~~--~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl   95 (375)
T KOG0591|consen   18 LADYQILKKIGRGSFGEVYKVQCL--LDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL   95 (375)
T ss_pred             HHHHHHHHHHcCCcchheEEeeec--cCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence            345677899999999999999887  67889999988632  3556778999999999999999999998 4555555 8


Q ss_pred             EEEEecCCCCCHhHhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhhccCC-ceEecCCCCCcEEeccCCCCCCCcEEEe
Q 047157          563 LLVYELMPNGTLSNFLFH---EGQRPGWVQRVEIALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKIS  638 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~-~ivH~dlkp~NIll~~~~~~~~~~~kL~  638 (788)
                      +||||++..|+|.+.+++   .++.+++..+++++.|+++||.++|.+... -|+||||||.||+|+     .++.+||+
T Consensus        96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~-----~~gvvKLG  170 (375)
T KOG0591|consen   96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLT-----ANGVVKLG  170 (375)
T ss_pred             HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEc-----CCCceeec
Confidence            999999999999999853   456789999999999999999999993221 399999999999999     88999999


Q ss_pred             ecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHH
Q 047157          639 DFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVI  718 (788)
Q Consensus       639 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  718 (788)
                      |||+++.+....... ...+|||.||+||.+.+.+|+.|+||||+||++|||+.-++||.+....+...           
T Consensus       171 DfGL~r~l~s~~tfA-~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~-----------  238 (375)
T KOG0591|consen  171 DFGLGRFLSSKTTFA-HSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCK-----------  238 (375)
T ss_pred             cchhHhHhcchhHHH-HhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHH-----------
Confidence            999999987655433 45789999999999999999999999999999999999999998763322111           


Q ss_pred             HHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          719 SCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       719 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                       .+..++.        ....+..+...+..|+..|+..||+.||+...+++.+..
T Consensus       239 -KI~qgd~--------~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  239 -KIEQGDY--------PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             -HHHcCCC--------CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence             1112211        112335677888999999999999999997666666654

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-43  Score=372.38  Aligned_cols=262  Identities=28%  Similarity=0.473  Sum_probs=219.9

Q ss_pred             HHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       484 ~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      ++......+.+.||+|-||.||.|.+.   ....||+|.+... .-..+.|.+|+++|++|+|+|||+++++|..++.++
T Consensus       202 ei~r~~l~l~~~LG~G~FG~V~~g~~~---~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piy  277 (468)
T KOG0197|consen  202 EIPREELKLIRELGSGQFGEVWLGKWN---GSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIY  277 (468)
T ss_pred             eecHHHHHHHHHhcCCccceEEEEEEc---CCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceE
Confidence            445555667899999999999999995   5558999998764 333468889999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhc-cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          564 LVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ||||||+.|+|.++|++ .+..+...+.+.++.|||+|++||+++   ++|||||.++||||+     ++..+||+|||+
T Consensus       278 IVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~-----~~~~vKIsDFGL  349 (468)
T KOG0197|consen  278 IVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVD-----EDLVVKISDFGL  349 (468)
T ss_pred             EEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---Cccchhhhhhheeec-----cCceEEEccccc
Confidence            99999999999999986 567889999999999999999999999   999999999999999     888999999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      |+....+.........-...|.|||.+....++.|||||||||+||||+| |+.|+......+.                
T Consensus       350 Ar~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev----------------  413 (468)
T KOG0197|consen  350 ARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEV----------------  413 (468)
T ss_pred             ccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHH----------------
Confidence            99666555544444556778999999999999999999999999999997 7777765533221                


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCCC
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVG  778 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~~  778 (788)
                           -+.++..-+...+...+..+.+|+..||+.+|++|||++.+...|+.+....
T Consensus       414 -----~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~  465 (468)
T KOG0197|consen  414 -----LELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST  465 (468)
T ss_pred             -----HHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence                 1122223344445556778889999999999999999999999998776543

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=7.2e-41  Score=327.53  Aligned_cols=265  Identities=23%  Similarity=0.293  Sum_probs=210.2

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeeccc--chHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCC
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMP  570 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~  570 (788)
                      ..++|+|+||+||+++++  ++++.||||++-.  +.+...+-.++|+++|++++|+|+|.++++|.....++||+||++
T Consensus         7 LgkvGEGSYGvV~KCrnk--~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~d   84 (396)
T KOG0593|consen    7 LGKVGEGSYGVVMKCRNK--DTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCD   84 (396)
T ss_pred             hhccccCcceEEEEeccC--CcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecc
Confidence            457899999999999887  8999999999843  235566778999999999999999999999999999999999997


Q ss_pred             CCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCC
Q 047157          571 NGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ  650 (788)
Q Consensus       571 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~  650 (788)
                      ..-| +-|.......+...+.+++.|+++|+.|+|++   ++|||||||+||||+     .++.+||+|||+|+.+.. .
T Consensus        85 hTvL-~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit-----~~gvvKLCDFGFAR~L~~-p  154 (396)
T KOG0593|consen   85 HTVL-HELERYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILIT-----QNGVVKLCDFGFARTLSA-P  154 (396)
T ss_pred             hHHH-HHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEe-----cCCcEEeccchhhHhhcC-C
Confidence            6444 44556667788899999999999999999999   999999999999999     889999999999998874 2


Q ss_pred             CcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHH---HHh-hccc
Q 047157          651 TRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVI---SCM-LSRN  725 (788)
Q Consensus       651 ~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~  725 (788)
                      ....+..+.|..|+|||.+.+ .+|.+..||||+||++.||++|.+.|.+.+..++...+...+.....   ..+ ..+.
T Consensus       155 gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~  234 (396)
T KOG0593|consen  155 GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPF  234 (396)
T ss_pred             cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCc
Confidence            334456788999999999977 78999999999999999999999999887654443322222222111   111 1222


Q ss_pred             ccccccCCCCCcccH-----HHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          726 LQVLVSHDPEVLSDL-----ERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~-----~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      +..+.-+.++...+.     ....-+++++..||+.||++|++.+|++.
T Consensus       235 F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  235 FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence            233333333333332     23457889999999999999999999875

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3e-41  Score=349.36  Aligned_cols=271  Identities=21%  Similarity=0.269  Sum_probs=215.6

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHH-HHHHHHHHhcCCC-ccccceEeeEEecCC-eEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNE-EFMTELKIIGRTH-HKNLVRLLGFCSEED-KRL  563 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~-~~~~E~~~l~~l~-hpniv~~~~~~~~~~-~~~  563 (788)
                      ...|...++||.|.||.||+|+..  ..+..||||++++......+ .-.+|+..|++|+ ||||+++.+++.+.+ .++
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~--~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~   86 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSK--ETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY   86 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeec--CCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence            456778899999999999999877  66778999999876544333 3468999999998 999999999998888 999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +||||| ..+|.++++++++.+++..+..|+.||++||+|+|.+   |++|||+||+|||+.     ....+||+|||+|
T Consensus        87 fVfE~M-d~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~-----~~~~iKiaDFGLA  157 (538)
T KOG0661|consen   87 FVFEFM-DCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILIS-----GNDVIKIADFGLA  157 (538)
T ss_pred             eeHHhh-hhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEec-----ccceeEecccccc
Confidence            999999 5699999999989999999999999999999999999   999999999999997     6789999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccc-cCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWL-RNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      +.+....  ..+..+.|..|+|||++ +..-|+.+.|+||+|||++|+.+-+..|.+.+..++..++...+.......+.
T Consensus       158 Rev~Skp--PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~  235 (538)
T KOG0661|consen  158 REVRSKP--PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWP  235 (538)
T ss_pred             cccccCC--CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccch
Confidence            9875433  34566789999999987 56789999999999999999999999998876655443333322221111111


Q ss_pred             c---------ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          723 S---------RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       723 ~---------~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                      +         -.+............. ....++++++.+|++.||.+||||+|++++-
T Consensus       236 eg~~La~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~p  292 (538)
T KOG0661|consen  236 EGYNLASAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQHP  292 (538)
T ss_pred             hHHHHHHHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence            1         1111111111111112 2567889999999999999999999999853

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-40  Score=334.99  Aligned_cols=247  Identities=28%  Similarity=0.326  Sum_probs=202.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ...+.++||+|+||+||+++.+  ++++.+|+|.+++..   ....+...+|..+|.+++||.||+++-.|++.+.+|||
T Consensus        26 dF~~lkviGkG~fGkV~~Vrk~--dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   26 DFEILKVIGKGSFGKVFQVRKK--DTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             heeeeeeeeccCCceEEEEEEc--ccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            4456799999999999999877  888999999997654   23456788999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      +||+.||.|.-+|.++ ..+++..+.-++..|+.||.|||++   +||||||||+|||||     .+++++|+|||+++.
T Consensus       104 ld~~~GGeLf~hL~~e-g~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd-----~~GHi~LtDFgL~k~  174 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQRE-GRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLD-----EQGHIKLTDFGLCKE  174 (357)
T ss_pred             EeccCCccHHHHHHhc-CCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeec-----CCCcEEEeccccchh
Confidence            9999999999999655 5677777778889999999999999   999999999999999     899999999999996


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ...... ...+++||+.|||||++.+..|+..+|.||+|+++|||++|.+||...+..+..+            .+....
T Consensus       175 ~~~~~~-~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~------------~I~~~k  241 (357)
T KOG0598|consen  175 DLKDGD-ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYD------------KILKGK  241 (357)
T ss_pred             cccCCC-ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHH------------HHhcCc
Confidence            544333 2344899999999999999999999999999999999999999998764332211            111111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC----CHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP----SMKKVI  768 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP----t~~evl  768 (788)
                      +         ...+.-...+..+++..+|+.||++|.    .+++|.
T Consensus       242 ~---------~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik  279 (357)
T KOG0598|consen  242 L---------PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIK  279 (357)
T ss_pred             C---------CCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhh
Confidence            0         001111235667888999999999995    455544

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.8e-40  Score=342.87  Aligned_cols=269  Identities=24%  Similarity=0.281  Sum_probs=212.9

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecC--CeEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE--DKRLLV  565 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~~~lV  565 (788)
                      |.-.++||+|.||.||+|+..  .++..||+|+++.+.  .....-..+||.+|++|+||||+++.+...+.  ..+|||
T Consensus       119 feki~kIGeGTyg~VYkAr~~--~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV  196 (560)
T KOG0600|consen  119 FEKIEKIGEGTYGQVYKARDL--ETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV  196 (560)
T ss_pred             HHHHHHhcCcchhheeEeeec--ccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence            333578999999999999887  788899999997654  34445678999999999999999999988776  689999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      +|||+. +|..++...+-.++..++..++.||+.||.|+|.+   +|+|||||.+|||||     .++.+||+|||+|+.
T Consensus       197 FeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLid-----n~G~LKiaDFGLAr~  267 (560)
T KOG0600|consen  197 FEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILID-----NNGVLKIADFGLARF  267 (560)
T ss_pred             Eecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEc-----CCCCEEeccccceee
Confidence            999965 89999988888999999999999999999999999   999999999999999     889999999999999


Q ss_pred             cCCCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      +........+..+-|..|+|||++.+. .|+.+.|+||.||||.||++|+..|.+....++...+...........+...
T Consensus       268 y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~  347 (560)
T KOG0600|consen  268 YTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVS  347 (560)
T ss_pred             ccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccc
Confidence            888777777888889999999998765 7999999999999999999999999887665544332211111111111111


Q ss_pred             cccccccCCCCCcc--cH-----HHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          725 NLQVLVSHDPEVLS--DL-----ERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       725 ~~~~l~~~~~~~~~--~~-----~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .+.......+....  ..     ......++|+..+|..||.+|.|+.++++
T Consensus       348 kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  348 KLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             cCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence            11111111111111  11     12345678889999999999999999885

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-40  Score=346.64  Aligned_cols=250  Identities=26%  Similarity=0.310  Sum_probs=207.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~l  564 (788)
                      .+.|.+.||.|+|++|++|+.+  .+++.+|||++.+..   +...+.+..|-.+|.+| .||.|++++-.|+++..+|+
T Consensus        74 DF~Fg~~lGeGSYStV~~A~~~--~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF  151 (604)
T KOG0592|consen   74 DFKFGKILGEGSYSTVVLAREK--ATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF  151 (604)
T ss_pred             hcchhheeccccceeEEEeeec--CCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence            4567899999999999999887  788899999997653   33445678899999999 89999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |+||+++|+|.++|.+. ..+++.....++.+|+.||+|||++   |||||||||+|||||     .++++||+|||.|+
T Consensus       152 vLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd-----~dmhikITDFGsAK  222 (604)
T KOG0592|consen  152 VLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLD-----KDGHIKITDFGSAK  222 (604)
T ss_pred             EEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEc-----CCCcEEEeeccccc
Confidence            99999999999999766 6688888889999999999999999   999999999999999     99999999999999


Q ss_pred             ccCCCCCc------------ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh
Q 047157          645 LLNKDQTR------------TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV  712 (788)
Q Consensus       645 ~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~  712 (788)
                      .+......            ....++||..|.+||++.....++.+|||+||||||+|+.|++||...+....-+     
T Consensus       223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFq-----  297 (604)
T KOG0592|consen  223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQ-----  297 (604)
T ss_pred             cCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHH-----
Confidence            88543221            1145889999999999999999999999999999999999999998653221111     


Q ss_pred             hHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          713 LSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       713 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                             .+.          ..+........+...+|+.+.|..||.+|+|++||.++.
T Consensus       298 -------kI~----------~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp  339 (604)
T KOG0592|consen  298 -------KIQ----------ALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP  339 (604)
T ss_pred             -------HHH----------HhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence                   110          011111112235677889999999999999999998864

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=3e-40  Score=366.64  Aligned_cols=266  Identities=30%  Similarity=0.457  Sum_probs=219.2

Q ss_pred             HHHHHHhhcccccccccccceEEEEEEec---cCcceeeeeeecccchHH-HHHHHHHHHHHhcCCCccccceEeeEEec
Q 047157          483 QELQEATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDIEK-TNEEFMTELKIIGRTHHKNLVRLLGFCSE  558 (788)
Q Consensus       483 ~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~  558 (788)
                      .++......+.+.||+|.||.||+|+...   ......||||.+++.... .+++|++|++++..|+|||||+++|+|.+
T Consensus       481 ~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~  560 (774)
T KOG1026|consen  481 LEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCRE  560 (774)
T ss_pred             eEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc
Confidence            34455555677899999999999998652   244568999999877655 78899999999999999999999999999


Q ss_pred             CCeEEEEEecCCCCCHhHhhhcc---------CCC----CCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEec
Q 047157          559 EDKRLLVYELMPNGTLSNFLFHE---------GQR----PGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLD  625 (788)
Q Consensus       559 ~~~~~lV~e~~~~gsL~~~l~~~---------~~~----~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  625 (788)
                      ++..++|+|||..|+|.++|...         +..    ++..+.+.|+.|||.|+.||-++   .+|||||..+|+||.
T Consensus       561 ~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVg  637 (774)
T KOG1026|consen  561 GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVG  637 (774)
T ss_pred             CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceec
Confidence            99999999999999999999542         122    78889999999999999999999   999999999999998


Q ss_pred             cCCCCCCCcEEEeecCCccccC-CCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccc
Q 047157          626 LKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVE  703 (788)
Q Consensus       626 ~~~~~~~~~~kL~Dfg~a~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~  703 (788)
                           ++..|||+|||+++..= .+......+..-..+|||||.+..++||.+||||||||+|||+++ |+.|+.+...+
T Consensus       638 -----e~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~  712 (774)
T KOG1026|consen  638 -----ENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ  712 (774)
T ss_pred             -----cceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH
Confidence                 89999999999998652 222222223345678999999999999999999999999999996 88899876443


Q ss_pred             cccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCC
Q 047157          704 EESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEV  777 (788)
Q Consensus       704 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~  777 (788)
                      +            +...+..+.+         ...+...+.++..|+..||+.+|++||+++||-..|+...+.
T Consensus       713 E------------VIe~i~~g~l---------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~  765 (774)
T KOG1026|consen  713 E------------VIECIRAGQL---------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA  765 (774)
T ss_pred             H------------HHHHHHcCCc---------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence            3            2333333333         223345677889999999999999999999999999875543

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-39  Score=336.28  Aligned_cols=254  Identities=28%  Similarity=0.418  Sum_probs=202.6

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCC--eEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED--KRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lV~e  567 (788)
                      ....+.||+|+||+||++...  +++...|||..........+.+.+|+++|.+++|||||+++|.....+  .+++.||
T Consensus        19 ~~~~~~lG~Gs~G~V~l~~~~--~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   19 WSKGKLLGRGSFGSVYLATNK--KTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME   96 (313)
T ss_pred             hhhhccccCccceEEEEEEec--CCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence            344688999999999999987  557799999987654333677899999999999999999999855544  6899999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCC-CCcEEEeecCCcccc
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDT-NYMAKISDFGISKLL  646 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~-~~~~kL~Dfg~a~~~  646 (788)
                      |+++|+|.+++...+..+++..+..+.+||++||+|||++   +|+||||||+|||++     . ++.+||+|||++...
T Consensus        97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~-----~~~~~~KlaDFG~a~~~  168 (313)
T KOG0198|consen   97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLD-----PSNGDVKLADFGLAKKL  168 (313)
T ss_pred             ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEe-----CCCCeEEeccCcccccc
Confidence            9999999999987766789999999999999999999999   999999999999998     6 689999999999877


Q ss_pred             CC--CCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          647 NK--DQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       647 ~~--~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ..  ..........||+.|||||++..+ ...+++|||||||++.||+||+.||...  .        ....+.......
T Consensus       169 ~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~--------~~~~~~~~ig~~  238 (313)
T KOG0198|consen  169 ESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--F--------EEAEALLLIGRE  238 (313)
T ss_pred             ccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--c--------chHHHHHHHhcc
Confidence            63  222334457899999999999853 3345999999999999999999999753  0        011111111112


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                      .....+         +.....+..+++..|++.||++||||++++++.-
T Consensus       239 ~~~P~i---------p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf  278 (313)
T KOG0198|consen  239 DSLPEI---------PDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF  278 (313)
T ss_pred             CCCCCC---------CcccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence            211111         1123456778899999999999999999998763

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.8e-39  Score=329.42  Aligned_cols=260  Identities=22%  Similarity=0.290  Sum_probs=209.9

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchH-HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE-KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ..|.+.++||.|.-++||+|+..  ..+..||||++.-+.. ...+.+.+|+..|+.++||||++++..|..+..+|+||
T Consensus        26 ~~YeL~e~IG~G~sa~V~~A~c~--p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm  103 (516)
T KOG0582|consen   26 KDYELQEVIGVGASAVVYLARCI--PTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM  103 (516)
T ss_pred             cceeEEEEEeccceeEeeeeeec--ccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence            45777899999999999999988  5668999999965442 33588999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      .||.+||+.++++.. ...+++..+..|++++++||.|||.+   |.||||||+.||||+     .+|.|||+|||....
T Consensus       104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~-----~dG~VkLadFgvsa~  175 (516)
T KOG0582|consen  104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILID-----SDGTVKLADFGVSAS  175 (516)
T ss_pred             hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEc-----CCCcEEEcCceeeee
Confidence            999999999999654 45689999999999999999999999   999999999999999     999999999998877


Q ss_pred             cCCCCCccc---ccccCCccccCccccc--CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          646 LNKDQTRTD---TNMRGTMGYVAPEWLR--NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       646 ~~~~~~~~~---~~~~gt~~y~aPE~~~--~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      +.....+..   ..+.||+.|||||++.  ...|+.|+|||||||+..||.+|..||......+.           . -.
T Consensus       176 l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv-----------L-l~  243 (516)
T KOG0582|consen  176 LFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV-----------L-LL  243 (516)
T ss_pred             ecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH-----------H-HH
Confidence            654443322   4568999999999953  34699999999999999999999999975432110           0 01


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ...+....+................+.+++..||+.||.+|||++++++
T Consensus       244 tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  244 TLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             HhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence            1111111111112222333445567889999999999999999999986

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=8.7e-41  Score=362.67  Aligned_cols=272  Identities=26%  Similarity=0.492  Sum_probs=228.4

Q ss_pred             CCcccCHHHHHHH-----------hhcccccccccccceEEEEEEeccC-cceeeeeeecccch-HHHHHHHHHHHHHhc
Q 047157          476 NFREFTFQELQEA-----------TKGFSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKDI-EKTNEEFMTELKIIG  542 (788)
Q Consensus       476 ~~~~~~~~~l~~~-----------t~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~  542 (788)
                      -.+.++|++=.++           ...+.++||.|.||.|++|.++... ....||||.++... ++.+.+|+.|..||.
T Consensus       606 YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMG  685 (996)
T KOG0196|consen  606 YIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMG  685 (996)
T ss_pred             ecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcc
Confidence            3556777654333           3445578999999999999998533 44689999998654 566789999999999


Q ss_pred             CCCccccceEeeEEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcE
Q 047157          543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNV  622 (788)
Q Consensus       543 ~l~hpniv~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  622 (788)
                      +++||||+++.|+.......+||+|||++|+|+.+|+++...+++.+..-++++||.|++||.+.   ++|||||.++||
T Consensus       686 QFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNI  762 (996)
T KOG0196|consen  686 QFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNI  762 (996)
T ss_pred             cCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhc---Cchhhhhhhhhe
Confidence            99999999999999999999999999999999999999888899999999999999999999998   999999999999


Q ss_pred             EeccCCCCCCCcEEEeecCCccccCCCCCcccccccC--CccccCcccccCCCCCccCcchhhHHHHHHHH-hCCCCCCc
Q 047157          623 LLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG--TMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII-CGRRHIEL  699 (788)
Q Consensus       623 ll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~s~k~DVwSlGvil~ell-tg~~p~~~  699 (788)
                      |++     .+...|++|||+++.+..+.....+...|  ..+|.|||.+...++|.++|||||||++||.+ .|.+|+..
T Consensus       763 LVN-----snLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd  837 (996)
T KOG0196|consen  763 LVN-----SNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD  837 (996)
T ss_pred             eec-----cceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccc
Confidence            998     99999999999999886665333333333  46899999999999999999999999999987 48899865


Q ss_pred             cccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          700 SRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ...++..+                     -+...-....+++.+..|.+|+++|||.|-.+||.+.+|+.+|+++..
T Consensus       838 mSNQdVIk---------------------aIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr  893 (996)
T KOG0196|consen  838 MSNQDVIK---------------------AIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR  893 (996)
T ss_pred             cchHHHHH---------------------HHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence            43332211                     122344555667788899999999999999999999999999998764

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-39  Score=345.04  Aligned_cols=245  Identities=27%  Similarity=0.399  Sum_probs=210.8

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGT  573 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~gs  573 (788)
                      ++||+|+.|.||.+...  ..+..||||++....+...+-+.+|+.+|+..+|+|||++++.|...+++++|||||++|+
T Consensus       279 ~kigqgaSG~vy~A~~~--~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggs  356 (550)
T KOG0578|consen  279 KKIGQGATGGVYVARKI--STKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGS  356 (550)
T ss_pred             hhhccccccceeeeeec--cCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCc
Confidence            67999999999999876  6777899999988777778889999999999999999999999999999999999999999


Q ss_pred             HhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCcc
Q 047157          574 LSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT  653 (788)
Q Consensus       574 L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~  653 (788)
                      |.+.+.+  ..+++.++..|++++++||+|||.+   +|+|||||.+|||++     .++.+||+|||++..+..... .
T Consensus       357 LTDvVt~--~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~-----~~g~vKltDFGFcaqi~~~~~-K  425 (550)
T KOG0578|consen  357 LTDVVTK--TRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLT-----MDGSVKLTDFGFCAQISEEQS-K  425 (550)
T ss_pred             hhhhhhc--ccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEec-----cCCcEEEeeeeeeeccccccC-c
Confidence            9999844  3589999999999999999999999   999999999999998     788899999999998876554 4


Q ss_pred             cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCC
Q 047157          654 DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHD  733 (788)
Q Consensus       654 ~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  733 (788)
                      ....+||+.|||||+...+.|.+|.||||||+++.||+-|++||-..+....         -|   .+.       ....
T Consensus       426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrA---------ly---LIa-------~ng~  486 (550)
T KOG0578|consen  426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---------LY---LIA-------TNGT  486 (550)
T ss_pred             cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHH---------HH---HHh-------hcCC
Confidence            4557899999999999999999999999999999999999999965322110         00   011       1123


Q ss_pred             CCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          734 PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       734 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ++..........+.+++.+||+.||++||++.|+|++
T Consensus       487 P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  487 PKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             CCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence            4444455667788999999999999999999999974

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-39  Score=345.82  Aligned_cols=249  Identities=27%  Similarity=0.375  Sum_probs=204.6

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccc----hH-HHHHHHHHHHHHhcCCC-ccccceEeeEEecCC
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD----IE-KTNEEFMTELKIIGRTH-HKNLVRLLGFCSEED  560 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~----~~-~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~  560 (788)
                      ...|.+.+.||+|+||+|+.|.+.  .++..||+|.+.+.    .. ...+.+.+|+.++++++ ||||+++++++....
T Consensus        16 ~g~y~~~~~lG~GsfgkV~~a~~~--~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   16 IGKYELGRTLGSGSFGKVKLAKHR--LTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cCceeeeeeecCCCCeeEEEeeec--cCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            445777899999999999999887  56689999977653    12 34567778999999998 999999999999999


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCC-CcEEEee
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTN-YMAKISD  639 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~-~~~kL~D  639 (788)
                      ..++||||+.+|+|.+++.+ ..++.+.....+++||+.|++|||++   +|+||||||+|||++     .+ +++||+|
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld-----~~~~~~Kl~D  164 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLD-----GNEGNLKLSD  164 (370)
T ss_pred             eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEec-----CCCCCEEEec
Confidence            99999999999999999988 67788899999999999999999999   999999999999999     66 8999999


Q ss_pred             cCCccccCCCCCcccccccCCccccCcccccCCC-CC-ccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHH
Q 047157          640 FGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP-VT-TKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV  717 (788)
Q Consensus       640 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~  717 (788)
                      ||++.... .........+|++.|+|||++.+.. |+ .++||||+||+||.|++|+.||+.......            
T Consensus       165 FG~s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l------------  231 (370)
T KOG0583|consen  165 FGLSAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNL------------  231 (370)
T ss_pred             cccccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHH------------
Confidence            99999874 2223344578999999999999987 87 789999999999999999999986321110            


Q ss_pred             HHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 047157          718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI  768 (788)
Q Consensus       718 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl  768 (788)
                      ...+..+        ......... ..++..++.+||+.||.+|+|+.+|+
T Consensus       232 ~~ki~~~--------~~~~p~~~~-S~~~~~Li~~mL~~~P~~R~t~~~i~  273 (370)
T KOG0583|consen  232 YRKIRKG--------EFKIPSYLL-SPEARSLIEKMLVPDPSTRITLLEIL  273 (370)
T ss_pred             HHHHhcC--------CccCCCCcC-CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence            0111111        111111111 56778899999999999999999999

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=5e-39  Score=341.78  Aligned_cols=261  Identities=25%  Similarity=0.420  Sum_probs=209.7

Q ss_pred             HHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCe
Q 047157          484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDK  561 (788)
Q Consensus       484 ~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  561 (788)
                      ||......+.+.||+|.||+||+|.+.    | .||||.+.-.  ..+..+.|++|+..+++.+|.||+-+.|+|.....
T Consensus       388 eIp~~ev~l~~rIGsGsFGtV~Rg~wh----G-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~  462 (678)
T KOG0193|consen  388 EIPPEEVLLGERIGSGSFGTVYRGRWH----G-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL  462 (678)
T ss_pred             ccCHHHhhccceeccccccceeecccc----c-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence            344444456789999999999999884    3 7999988643  35678899999999999999999999999988877


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                       .||+.+|+|-+|..+|+....+++..+.+.|++||++|+.|||.+   +|||||||..||++.     ++++|||+|||
T Consensus       463 -AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~-----~~~kVkIgDFG  533 (678)
T KOG0193|consen  463 -AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLH-----EDLKVKIGDFG  533 (678)
T ss_pred             -eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEc-----cCCcEEEeccc
Confidence             999999999999999988888899999999999999999999999   999999999999998     77999999999


Q ss_pred             CccccCCC-CCcccccccCCccccCccccc---CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHH
Q 047157          642 ISKLLNKD-QTRTDTNMRGTMGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV  717 (788)
Q Consensus       642 ~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~  717 (788)
                      ++..-..- .........|...|||||+++   ..+|++.+||||||+++|||++|..||.....+.......       
T Consensus       534 Latvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVG-------  606 (678)
T KOG0193|consen  534 LATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVG-------  606 (678)
T ss_pred             ceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEec-------
Confidence            99754322 222233456788999999985   4589999999999999999999999997432222111000       


Q ss_pred             HHHhhcccccccccCCCCCcc-cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          718 ISCMLSRNLQVLVSHDPEVLS-DLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       718 ~~~~~~~~~~~l~~~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                           .+    .+  .++... .....+++.+|+..||..++++||++.+|+..|+.++.
T Consensus       607 -----rG----~l--~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  607 -----RG----YL--MPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             -----cc----cc--CccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence                 00    00  011111 22445678889999999999999999999999887765

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=1.6e-38  Score=345.59  Aligned_cols=262  Identities=29%  Similarity=0.428  Sum_probs=202.8

Q ss_pred             HHhhcccccccccccceEEEEEEec---cCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecCC-
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEED-  560 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~-  560 (788)
                      ...+.+.++||+|+||.||+|.+..   ...+..||||++.... ....+.+.+|+.++.++ +||||+++++++...+ 
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            4557788999999999999997531   2344689999986533 33456789999999999 8999999999887644 


Q ss_pred             eEEEEEecCCCCCHhHhhhccC----------------------------------------------------------
Q 047157          561 KRLLVYELMPNGTLSNFLFHEG----------------------------------------------------------  582 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~----------------------------------------------------------  582 (788)
                      ..++||||+++|+|.+++....                                                          
T Consensus        86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (338)
T cd05102          86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD  165 (338)
T ss_pred             ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence            6889999999999999986431                                                          


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCc-cccccc
Q 047157          583 ---QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMR  658 (788)
Q Consensus       583 ---~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~  658 (788)
                         ..+++..+..++.||++||+|||++   +|+||||||+|||++     .++.+||+|||+++........ ......
T Consensus       166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~-----~~~~~kl~DfG~a~~~~~~~~~~~~~~~~  237 (338)
T cd05102         166 LWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLS-----ENNVVKICDFGLARDIYKDPDYVRKGSAR  237 (338)
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEc-----CCCcEEEeecccccccccCcchhcccCCC
Confidence               2367788899999999999999998   999999999999998     7789999999999865432221 122234


Q ss_pred             CCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCc
Q 047157          659 GTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVL  737 (788)
Q Consensus       659 gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  737 (788)
                      ++..|+|||++.+..++.++||||||+++|||++ |..||......+.           .......+...         .
T Consensus       238 ~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-----------~~~~~~~~~~~---------~  297 (338)
T cd05102         238 LPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-----------FCQRLKDGTRM---------R  297 (338)
T ss_pred             CCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-----------HHHHHhcCCCC---------C
Confidence            5678999999999999999999999999999997 9999975422110           00111111100         0


Q ss_pred             ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          738 SDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       738 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ......+.+.+++.+||+.||++|||+.||+++|++++.
T Consensus       298 ~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~  336 (338)
T cd05102         298 APENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ  336 (338)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            011234567889999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8.4e-39  Score=342.67  Aligned_cols=247  Identities=23%  Similarity=0.323  Sum_probs=205.2

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      +++.+.||+|+-|.|-+|++.  .+|+.+|||++.+..   ......+.+|+.+|+.+.|||++++++++++..++|+|.
T Consensus        14 wkLgkTLG~Gstg~vrlakh~--~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRLAKHA--ETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             eeccccccCCCCceehhhhcc--cccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            456788999999999999887  889999999997652   334557889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++|-|.+++..++ .+.+.+..+++.||+.|+.|+|..   +|+||||||+|+|||     ...++||+|||+|.+-
T Consensus        92 Eyv~gGELFdylv~kG-~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd-----~~~nIKIADFGMAsLe  162 (786)
T KOG0588|consen   92 EYVPGGELFDYLVRKG-PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLD-----VKNNIKIADFGMASLE  162 (786)
T ss_pred             EecCCchhHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhh-----cccCEeeeccceeecc
Confidence            9999999999997774 456677778999999999999999   999999999999999     6667999999999875


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCC-ccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVT-TKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ..+..  ..+.+|++.|.|||++.+.+|. .++||||.|||||.||||+.||+..+...            ....+..+.
T Consensus       163 ~~gkl--LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~------------LLlKV~~G~  228 (786)
T KOG0588|consen  163 VPGKL--LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRV------------LLLKVQRGV  228 (786)
T ss_pred             cCCcc--ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHH------------HHHHHHcCc
Confidence            54433  3346899999999999999987 68999999999999999999998543221            111122222


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                      ++          .+.....+..+|+.+|+..||++|.|++||+++-
T Consensus       229 f~----------MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP  264 (786)
T KOG0588|consen  229 FE----------MPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP  264 (786)
T ss_pred             cc----------CCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence            11          1123455677899999999999999999999864

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.2e-39  Score=346.24  Aligned_cols=260  Identities=29%  Similarity=0.417  Sum_probs=210.0

Q ss_pred             cccccccccccceEEEEEEeccCc--ceeeeeeeccc---chHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDT--QIEIAVKKLEK---DIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~l~~---~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .+.++||+|+||.||+|.++..+.  ...||||....   ......++|.+|.++|++++|||||+++|++..+..++||
T Consensus       160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~iv  239 (474)
T KOG0194|consen  160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLV  239 (474)
T ss_pred             cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEE
Confidence            345899999999999999986544  22389999875   3367788999999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+|.||+|.++|.+.+..++..+++.++.+.|.||+|||++   +++||||..+|+|++     ....+||+|||+++.
T Consensus       240 mEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~-----~~~~vKISDFGLs~~  311 (474)
T KOG0194|consen  240 MELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYS-----KKGVVKISDFGLSRA  311 (474)
T ss_pred             EEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheec-----CCCeEEeCccccccC
Confidence            999999999999998888899999999999999999999999   999999999999998     667789999999876


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ...... ......-...|+|||.+....+++++|||||||++||+.+ |..||.+....+..            ..+...
T Consensus       312 ~~~~~~-~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~------------~kI~~~  378 (474)
T KOG0194|consen  312 GSQYVM-KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVK------------AKIVKN  378 (474)
T ss_pred             Ccceee-ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHH------------HHHHhc
Confidence            431111 1111234678999999999999999999999999999998 78898765432211            111011


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCCCC
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGM  779 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~~~  779 (788)
                              .-....+...+..+..++..||..||++||+|.++.+.|+.+.....
T Consensus       379 --------~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  379 --------GYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             --------CccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence                    11111122445667778889999999999999999999987765443

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=6.2e-38  Score=328.89  Aligned_cols=261  Identities=23%  Similarity=0.367  Sum_probs=208.0

Q ss_pred             HHHHhhcccccccccccceEEEEEEec-cCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRL-KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      +....+.+.+.||+|+||.||+|.+.. ......||+|.++... ....+.+.+|+.++++++||||+++++++..++..
T Consensus         2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   81 (266)
T cd05064           2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM   81 (266)
T ss_pred             CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence            445677888999999999999998753 2345689999987543 34456789999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||+++++|.+++......+++..++.++.||+.||+|||++   +++||||||+||+++     .++.+|++|||.
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~-----~~~~~~l~dfg~  153 (266)
T cd05064          82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVN-----SDLVCKISGFRR  153 (266)
T ss_pred             EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEc-----CCCcEEECCCcc
Confidence            999999999999999977666789999999999999999999999   999999999999998     788999999998


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      +...............++..|+|||.+.+..++.++||||||+++||+++ |+.||......+.        .    ...
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~--------~----~~~  221 (266)
T cd05064         154 LQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDV--------I----KAV  221 (266)
T ss_pred             cccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH--------H----HHH
Confidence            76543222222222345678999999999999999999999999999775 9999965422110        0    111


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      .....         ..........+.+++..||+.+|++||++++|++.|+++
T Consensus       222 ~~~~~---------~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         222 EDGFR---------LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HCCCC---------CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            11100         001122345678899999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1.6e-38  Score=306.38  Aligned_cols=270  Identities=20%  Similarity=0.246  Sum_probs=207.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      +|.-.++||+|.||.||+|+..  .+++.||||+++...  ........+|++.|+.++|+||+.++++|.+.+...||+
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~--~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf   80 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDT--ETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF   80 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEec--CCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence            3445678999999999999987  788899999997543  223456789999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      |||+ .+|+..++++...+...++..++.++++||+|||.+   .|+||||||.|+|++     +++.+||+|||+++.+
T Consensus        81 Efm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis-----~~g~lKiADFGLAr~f  151 (318)
T KOG0659|consen   81 EFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLIS-----SDGQLKIADFGLARFF  151 (318)
T ss_pred             Eecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEc-----CCCcEEeecccchhcc
Confidence            9995 599999999989999999999999999999999999   999999999999998     8999999999999988


Q ss_pred             CCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc-c
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS-R  724 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  724 (788)
                      ........ ..+-|..|+|||.+.+ +.|+...|+||.|||+.||+-|.+-|.+.+..++...+-..+.......+.+ .
T Consensus       152 ~~p~~~~~-~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~  230 (318)
T KOG0659|consen  152 GSPNRIQT-HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMT  230 (318)
T ss_pred             CCCCcccc-cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccc
Confidence            75544332 2367889999998876 4799999999999999999999988877654333221111110000000000 0


Q ss_pred             cccccc----cCCCCCc-ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 NLQVLV----SHDPEVL-SDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 ~~~~l~----~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .+.+..    -+.+... .-....+..++++..|+..||.+|+|+.|++++
T Consensus       231 ~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  231 SLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             ccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence            000000    0000000 112334566899999999999999999999865

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-38  Score=363.84  Aligned_cols=262  Identities=28%  Similarity=0.441  Sum_probs=214.4

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCc---ceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCC
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDT---QIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED  560 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~---~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  560 (788)
                      +....-.+.+.||+|.||.||.|.....+.   ...||||.+.+.. .+...+|.+|..+|+.++|||||+++|+|.+..
T Consensus       689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~  768 (1025)
T KOG1095|consen  689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG  768 (1025)
T ss_pred             CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence            334445566889999999999999875443   4569999997653 556779999999999999999999999999999


Q ss_pred             eEEEEEecCCCCCHhHhhhcc------CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCc
Q 047157          561 KRLLVYELMPNGTLSNFLFHE------GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM  634 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~  634 (788)
                      ..+|++|||++|+|..+|++.      ...+.....+.++.|||+|+.||+++   ++|||||..+|+||+     ....
T Consensus       769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~-----~~r~  840 (1025)
T KOG1095|consen  769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLD-----ERRV  840 (1025)
T ss_pred             CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeec-----ccCc
Confidence            999999999999999999887      67789999999999999999999999   999999999999999     7789


Q ss_pred             EEEeecCCccccCC-CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhh
Q 047157          635 AKISDFGISKLLNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIV  712 (788)
Q Consensus       635 ~kL~Dfg~a~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~  712 (788)
                      +||+|||+|+.+-. +.........-...|||||.+....++.|+|||||||+|||++| |..||...+..+.       
T Consensus       841 VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v-------  913 (1025)
T KOG1095|consen  841 VKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV-------  913 (1025)
T ss_pred             EEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH-------
Confidence            99999999995433 22222222244578999999999999999999999999999997 7788875532221       


Q ss_pred             hHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          713 LSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       713 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      +..    ....+          +...+...++.+.+|+..||+.+|++||++..|++.++.+.
T Consensus       914 ~~~----~~~gg----------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~  962 (1025)
T KOG1095|consen  914 LLD----VLEGG----------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAIS  962 (1025)
T ss_pred             HHH----HHhCC----------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhh
Confidence            111    11111          33334456778889999999999999999999999887664

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-38  Score=331.36  Aligned_cols=247  Identities=30%  Similarity=0.475  Sum_probs=202.1

Q ss_pred             ccCHHHHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEec
Q 047157          479 EFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE  558 (788)
Q Consensus       479 ~~~~~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~  558 (788)
                      ++.|++|.+.     +-||.|+.|.||+|+++    +..||||+++...       ..+|+.|++|+||||+.+.|+|..
T Consensus       120 eiPFe~IsEL-----eWlGSGaQGAVF~Grl~----netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtq  183 (904)
T KOG4721|consen  120 EIPFEEISEL-----EWLGSGAQGAVFLGRLH----NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQ  183 (904)
T ss_pred             cCCHHHhhhh-----hhhccCcccceeeeecc----CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecC
Confidence            4555665442     56999999999999984    4589999885432       257888999999999999999999


Q ss_pred             CCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEe
Q 047157          559 EDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS  638 (788)
Q Consensus       559 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~  638 (788)
                      ...++||||||..|.|.+.|+.. +.+.......+..+||.|+.|||.+   .|||||||.-||||.     .+..+||+
T Consensus       184 sPcyCIiMEfCa~GqL~~VLka~-~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs-----~~d~VKIs  254 (904)
T KOG4721|consen  184 SPCYCIIMEFCAQGQLYEVLKAG-RPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILIS-----YDDVVKIS  254 (904)
T ss_pred             CceeEEeeeccccccHHHHHhcc-CccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEee-----ccceEEec
Confidence            99999999999999999999554 6677788889999999999999999   999999999999998     67789999


Q ss_pred             ecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHH
Q 047157          639 DFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVI  718 (788)
Q Consensus       639 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  718 (788)
                      |||-++.....  .....+.||..|||||++++.+.++|+|||||||+|||||||..||...+.....-..         
T Consensus       255 DFGTS~e~~~~--STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGV---------  323 (904)
T KOG4721|consen  255 DFGTSKELSDK--STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGV---------  323 (904)
T ss_pred             cccchHhhhhh--hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEec---------
Confidence            99999876544  3344589999999999999999999999999999999999999999754332221110         


Q ss_pred             HHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          719 SCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       719 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                         -..        .+...-+...++-+.-|+++||+..|..||++++|+.+|+
T Consensus       324 ---GsN--------sL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld  366 (904)
T KOG4721|consen  324 ---GSN--------SLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD  366 (904)
T ss_pred             ---cCC--------cccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence               000        1112223344566777889999999999999999999996

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-38  Score=301.89  Aligned_cols=264  Identities=23%  Similarity=0.283  Sum_probs=211.7

Q ss_pred             HHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCC-----
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED-----  560 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----  560 (788)
                      ...+|++.++||+|||+-||++..-  .++..+|+|++.....+..+..++|++..++++|||+++++++...+.     
T Consensus        19 n~~Ryri~~~LgeGGfsfv~LV~~~--s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~   96 (302)
T KOG2345|consen   19 NNKRYRIQRLLGEGGFSFVDLVKGL--STGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH   96 (302)
T ss_pred             cCceEEEeeeecCCCceeeeeeccc--CcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence            3456788899999999999999865  667799999998877788899999999999999999999999875433     


Q ss_pred             eEEEEEecCCCCCHhHhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          561 KRLLVYELMPNGTLSNFLFH---EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                      +.||+++|...|+|.+.+..   ++..+++.+++.|+.+|++||.+||+. .++++||||||.|||+.     +.+.++|
T Consensus        97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls-----~~~~~vl  170 (302)
T KOG2345|consen   97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLS-----DSGLPVL  170 (302)
T ss_pred             eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEec-----CCCceEE
Confidence            58999999999999999854   355789999999999999999999997 33599999999999998     7889999


Q ss_pred             eecCCccccCCCCC--------cccccccCCccccCccccc---CCCCCccCcchhhHHHHHHHHhCCCCCCcccccccc
Q 047157          638 SDFGISKLLNKDQT--------RTDTNMRGTMGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEES  706 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~--------~~~~~~~gt~~y~aPE~~~---~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~  706 (788)
                      .|||.+........        +.......|..|+|||.+.   +..+++++|||||||+||+|+.|..||+..-.....
T Consensus       171 ~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgS  250 (302)
T KOG2345|consen  171 MDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGS  250 (302)
T ss_pred             EeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCe
Confidence            99999886532111        1112345789999999984   567889999999999999999999999753221100


Q ss_pred             ccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          707 EEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       707 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      -                  .-....+....+....+.+.+.+++++|++.||.+||++.+++..++.+.
T Consensus       251 l------------------aLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  251 L------------------ALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             E------------------EEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence            0                  00111112222333347888999999999999999999999999998753

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=1.7e-38  Score=333.31  Aligned_cols=247  Identities=27%  Similarity=0.393  Sum_probs=208.0

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .|.+.+.||+|+||.||+|+-+  .+.+.||+|.+.+..  .+..+.+.+|++++++++||||+.++++|+...+.++|+
T Consensus         3 ~yhv~e~iG~Gsfg~VYKgrrK--~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt   80 (808)
T KOG0597|consen    3 QYHVYEMIGEGSFGRVYKGRRK--YTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT   80 (808)
T ss_pred             chhHHHHhcCCccceeeecccc--cceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence            3556789999999999999776  788899999997543  455678999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+.| +|..+|... ..++++.+..|+.|++.||.|||+.   +|+|||+||+|||++     ..+.+|++|||+|+.+
T Consensus        81 e~a~g-~L~~il~~d-~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~-----~~~~~KlcdFg~Ar~m  150 (808)
T KOG0597|consen   81 EYAVG-DLFTILEQD-GKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLE-----KGGTLKLCDFGLARAM  150 (808)
T ss_pred             hhhhh-hHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeec-----CCCceeechhhhhhhc
Confidence            99977 999999655 5688899999999999999999999   999999999999998     8999999999999987


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      .. .....+...||+.|||||...+.+|+..+|+||+|||+||+.+|++||.......           .+..       
T Consensus       151 ~~-~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~-----------Lv~~-------  211 (808)
T KOG0597|consen  151 ST-NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQ-----------LVKS-------  211 (808)
T ss_pred             cc-CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHH-----------HHHH-------
Confidence            65 3344556889999999999999999999999999999999999999997542211           1111       


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                        +. .++ ...+......+..++...|+.||.+|.|..+++.+
T Consensus       212 --I~-~d~-v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  212 --IL-KDP-VKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH  251 (808)
T ss_pred             --Hh-cCC-CCCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence              11 111 11122556778889999999999999999998863

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.3e-38  Score=317.91  Aligned_cols=249  Identities=21%  Similarity=0.364  Sum_probs=209.9

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      +..|.|.+.||+|.||.|-++...  ..++.||||.++++.   ++..-.+.+|+++|..|+||||+.++++|+..+.+.
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~e~--~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIv  129 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAYEH--KSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIV  129 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehhhc--cCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEE
Confidence            456778899999999999999775  677899999997654   344557899999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      |||||..+|.|.+|+... ..+++.+...+++||..|+.|+|.+   +++|||||.+|||+|     .++++||+|||++
T Consensus       130 ivMEYaS~GeLYDYiSer-~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD-----~N~NiKIADFGLS  200 (668)
T KOG0611|consen  130 IVMEYASGGELYDYISER-GSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLD-----QNNNIKIADFGLS  200 (668)
T ss_pred             EEEEecCCccHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeec-----CCCCeeeeccchh
Confidence            999999999999999655 6788899999999999999999999   999999999999999     9999999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCC-ccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT-TKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ..+.....  ...++|++-|.+||++.+.+|. +..|-|||||+||.|+.|..||++.+...            ....+.
T Consensus       201 Nly~~~kf--LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~------------lvrQIs  266 (668)
T KOG0611|consen  201 NLYADKKF--LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR------------LVRQIS  266 (668)
T ss_pred             hhhccccH--HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH------------HHHHhh
Confidence            88755433  3468999999999999999986 78999999999999999999998864321            111122


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                      .+...+.           +.+....-||+|||-.+|++|-|+++|..+.
T Consensus       267 ~GaYrEP-----------~~PSdA~gLIRwmLmVNP~RRATieDiAsHW  304 (668)
T KOG0611|consen  267 RGAYREP-----------ETPSDASGLIRWMLMVNPERRATIEDIASHW  304 (668)
T ss_pred             cccccCC-----------CCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence            2222211           1223445689999999999999999999875

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=1.8e-37  Score=341.27  Aligned_cols=260  Identities=28%  Similarity=0.433  Sum_probs=202.7

Q ss_pred             HHhhcccccccccccceEEEEEEe---ccCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCe
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILR---LKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDK  561 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~---~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~  561 (788)
                      ...+.+.+.||+|+||.||+|...   ..+.+..||||+++... ....+.+.+|++++..+ +||||+++++++.+.+.
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            345677899999999999999753   23456689999986432 33456788999999999 89999999999999999


Q ss_pred             EEEEEecCCCCCHhHhhhccC-----------------------------------------------------------
Q 047157          562 RLLVYELMPNGTLSNFLFHEG-----------------------------------------------------------  582 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~-----------------------------------------------------------  582 (788)
                      .++||||+++|+|.+++....                                                           
T Consensus       114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (375)
T cd05104         114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS  193 (375)
T ss_pred             ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence            999999999999999985432                                                           


Q ss_pred             ---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          583 ---------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       583 ---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                                     ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .+..+||+|||++....
T Consensus       194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~-----~~~~~kl~DfG~a~~~~  265 (375)
T cd05104         194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLT-----HGRITKICDFGLARDIR  265 (375)
T ss_pred             ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEE-----CCCcEEEecCccceecc
Confidence                           1467888999999999999999998   999999999999998     77889999999998664


Q ss_pred             CCCCcc-cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          648 KDQTRT-DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       648 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ...... .....++..|+|||.+.+..++.++||||||+++|||++ |..||.......       .....    ...+.
T Consensus       266 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-------~~~~~----~~~~~  334 (375)
T cd05104         266 NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-------KFYKM----IKEGY  334 (375)
T ss_pred             CcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-------HHHHH----HHhCc
Confidence            432211 122345677999999999999999999999999999998 888886432111       01111    11110


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                       ...   .+     .....++.+++.+||+.||++|||+.||+++|++.
T Consensus       335 -~~~---~~-----~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         335 -RML---SP-----ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             -cCC---CC-----CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence             000   01     11235688999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=4.4e-37  Score=325.22  Aligned_cols=261  Identities=22%  Similarity=0.326  Sum_probs=203.2

Q ss_pred             CCcccCHHHHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchH---HHHHHHHHHHHHhcCCCccccceE
Q 047157          476 NFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLVRL  552 (788)
Q Consensus       476 ~~~~~~~~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~hpniv~~  552 (788)
                      +.+.++.++++..+   ...|++|+++.||+|..    ++..||||.++....   ...+.+.+|+.++++++||||+++
T Consensus        11 ~~~~i~~~~i~~~~---~~~i~~g~~~~v~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~   83 (283)
T PHA02988         11 DIKCIESDDIDKYT---SVLIKENDQNSIYKGIF----NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKI   83 (283)
T ss_pred             cceecCHHHcCCCC---CeEEeeCCceEEEEEEE----CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence            34455566653221   24689999999999987    356899999875432   225678899999999999999999


Q ss_pred             eeEEec----CCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCC
Q 047157          553 LGFCSE----EDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKT  628 (788)
Q Consensus       553 ~~~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  628 (788)
                      ++++.+    ....++||||+++|+|.+++.+. ..+++.....++.|++.||.|||+.  .+++||||||+|||++   
T Consensus        84 ~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~---  157 (283)
T PHA02988         84 YGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVT---  157 (283)
T ss_pred             eeeEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEEC---
Confidence            999876    35789999999999999999654 5688999999999999999999973  2788999999999998   


Q ss_pred             CCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccC--CCCCccCcchhhHHHHHHHHhCCCCCCcccccccc
Q 047157          629 LDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN--VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEES  706 (788)
Q Consensus       629 ~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~  706 (788)
                        .++.+||+|||++.......    ....++..|+|||++.+  ..++.++|||||||++|||++|+.||......+. 
T Consensus       158 --~~~~~kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~-  230 (283)
T PHA02988        158 --ENYKLKIICHGLEKILSSPP----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI-  230 (283)
T ss_pred             --CCCcEEEcccchHhhhcccc----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHH-
Confidence              78899999999988654322    22457889999999976  6899999999999999999999999975422110 


Q ss_pred             ccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          707 EEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       707 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                             ..    ......        .....+....+.+.+++.+||+.||++|||++||++.|+...
T Consensus       231 -------~~----~i~~~~--------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        231 -------YD----LIINKN--------NSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             -------HH----HHHhcC--------CCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence                   00    110010        001111123557889999999999999999999999998654

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=4.2e-37  Score=329.20  Aligned_cols=265  Identities=27%  Similarity=0.361  Sum_probs=201.8

Q ss_pred             HHhhcccccccccccceEEEEEEec--------------cCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccce
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRL--------------KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVR  551 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~--------------~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~  551 (788)
                      ...+.+.++||+|+||.||++.+..              ...+..||+|.+.... .....++.+|++++.+++||||++
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            3456778999999999999998642              1234579999887543 344668999999999999999999


Q ss_pred             EeeEEecCCeEEEEEecCCCCCHhHhhhccC------------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceE
Q 047157          552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEG------------------QRPGWVQRVEIALGVARGLLYLHEECETQII  613 (788)
Q Consensus       552 ~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~------------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv  613 (788)
                      +++++.+.+..++||||+++++|.+++....                  ..+++..++.++.||+.||.|||+.   +|+
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~iv  160 (304)
T cd05096          84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFV  160 (304)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Ccc
Confidence            9999999999999999999999999985421                  2357788999999999999999999   999


Q ss_pred             ecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh
Q 047157          614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC  692 (788)
Q Consensus       614 H~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt  692 (788)
                      ||||||+|||++     .++.+||+|||++......... ......++..|+|||++....++.++||||||+++|||++
T Consensus       161 H~dlkp~Nill~-----~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~  235 (304)
T cd05096         161 HRDLATRNCLVG-----ENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM  235 (304)
T ss_pred             ccCcchhheEEc-----CCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHH
Confidence            999999999998     7889999999999865433221 1223445788999999988899999999999999999987


Q ss_pred             --CCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          693 --GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       693 --g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                        +..||......+.        ..................      ........+.+++.+||+.||++|||++||.+.
T Consensus       236 ~~~~~p~~~~~~~~~--------~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~  301 (304)
T cd05096         236 LCKEQPYGELTDEQV--------IENAGEFFRDQGRQVYLF------RPPPCPQGLYELMLQCWSRDCRERPSFSDIHAF  301 (304)
T ss_pred             ccCCCCCCcCCHHHH--------HHHHHHHhhhcccccccc------CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence              4566654322111        111111111111000000      011234578899999999999999999999999


Q ss_pred             hhc
Q 047157          771 LEG  773 (788)
Q Consensus       771 L~~  773 (788)
                      |++
T Consensus       302 l~~  304 (304)
T cd05096         302 LTE  304 (304)
T ss_pred             HhC
Confidence            864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=4.5e-37  Score=325.76  Aligned_cols=251  Identities=25%  Similarity=0.293  Sum_probs=200.2

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      |...+.||+|+||.||++...  .++..||+|.+....   ......+.+|++++.+++|+||+++++.+.+.+..++||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~   79 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVR--ATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVL   79 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEe--cCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEE
Confidence            455688999999999999887  567799999886532   223346789999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+++|+|.+++... ...+++..+..++.|++.||+|||+.   +|+||||||+|||++     .++.+||+|||++..
T Consensus        80 e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~-----~~~~~kl~Dfg~~~~  151 (285)
T cd05631          80 TIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLD-----DRGHIRISDLGLAVQ  151 (285)
T ss_pred             EecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEEC-----CCCCEEEeeCCCcEE
Confidence            999999999888654 34678999999999999999999999   999999999999998     778999999999986


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ......  .....|+..|+|||++.+..++.++|||||||++|||++|+.||...........        ........ 
T Consensus       152 ~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~--------~~~~~~~~-  220 (285)
T cd05631         152 IPEGET--VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREE--------VDRRVKED-  220 (285)
T ss_pred             cCCCCe--ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHH--------HHHHhhcc-
Confidence            543221  2235689999999999999999999999999999999999999976432111000        00000000 


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS-----MKKVIHM  770 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~  770 (788)
                               ...........+.+|+.+||+.||++||+     +++++++
T Consensus       221 ---------~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  261 (285)
T cd05631         221 ---------QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH  261 (285)
T ss_pred             ---------cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence                     00111123456788999999999999997     8888874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-38  Score=325.04  Aligned_cols=247  Identities=26%  Similarity=0.374  Sum_probs=206.7

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      ...+.||+|.||.||+|...  .+++.||+|.+.-+. ....+++.+|+.++..++|+||.++|+.+..+..++++|||+
T Consensus        16 ~~~~~IgrGsfG~Vyk~~d~--~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~   93 (467)
T KOG0201|consen   16 TKLELIGRGSFGEVYKAIDN--KTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC   93 (467)
T ss_pred             ccchhccccccceeeeeeec--cccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence            33478999999999999987  788899999997544 344678899999999999999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      .+|++.+.|... ..+.+..+.-++++++.||.|||.+   +.+|||||+.|||+.     .++.+||+|||.+..+...
T Consensus        94 ~gGsv~~lL~~~-~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s-----~~g~vkl~DfgVa~ql~~~  164 (467)
T KOG0201|consen   94 GGGSVLDLLKSG-NILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLS-----ESGDVKLADFGVAGQLTNT  164 (467)
T ss_pred             cCcchhhhhccC-CCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEe-----ccCcEEEEecceeeeeech
Confidence            999999999543 4447778888999999999999999   999999999999998     7799999999999988765


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      .... ..++||+.|||||+++...|+.|+||||||++.+||.+|.+|+........                    +..+
T Consensus       165 ~~rr-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv--------------------lflI  223 (467)
T KOG0201|consen  165 VKRR-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV--------------------LFLI  223 (467)
T ss_pred             hhcc-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE--------------------EEec
Confidence            5554 568999999999999988999999999999999999999999865432111                    1111


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ....|..... .....+.+++..||+.||+.||+|.+++++
T Consensus       224 pk~~PP~L~~-~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  224 PKSAPPRLDG-DFSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             cCCCCCcccc-ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence            1112222222 556678889999999999999999999863

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-37  Score=301.75  Aligned_cols=234  Identities=26%  Similarity=0.291  Sum_probs=195.8

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .+.+.||.|+||.|.+++.+  .++..+|+|++++..   -+..+...+|..+|+.+.||+++++++.+.+.+..++|||
T Consensus        47 e~~~tlGtGSFGrV~LVr~k--~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvme  124 (355)
T KOG0616|consen   47 ERLKTLGTGSFGRVHLVREK--HSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVME  124 (355)
T ss_pred             hheeeeccCccceEEEEEEc--cCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEe
Confidence            45688999999999999887  667899999998754   2345677899999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |++||.|..++++. +++++....-++.||+.||+|||+.   +|++|||||+|||+|     .++.+||+|||+|+.+.
T Consensus       125 yv~GGElFS~Lrk~-~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD-----~~G~iKitDFGFAK~v~  195 (355)
T KOG0616|consen  125 YVPGGELFSYLRKS-GRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLD-----QNGHIKITDFGFAKRVS  195 (355)
T ss_pred             ccCCccHHHHHHhc-CCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeec-----cCCcEEEEeccceEEec
Confidence            99999999999765 5678888889999999999999999   999999999999999     99999999999999765


Q ss_pred             CCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      ..    .-+.+||+.|+|||++..+.+..++|.|||||++|||+.|..||...+....            ...+.++++.
T Consensus       196 ~r----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~i------------Y~KI~~~~v~  259 (355)
T KOG0616|consen  196 GR----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQI------------YEKILEGKVK  259 (355)
T ss_pred             Cc----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHH------------HHHHHhCccc
Confidence            43    3357899999999999999999999999999999999999999987643221            1222222211


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCC
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLR  761 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R  761 (788)
                                .+.-....+.+|+...|+.|-.+|
T Consensus       260 ----------fP~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  260 ----------FPSYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             ----------CCcccCHHHHHHHHHHHhhhhHhh
Confidence                      111223456677888888888888

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7.8e-38  Score=297.47  Aligned_cols=246  Identities=25%  Similarity=0.336  Sum_probs=205.8

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .++.+.||+|.||.||.|+.+  .+.-.||+|++.+..   ....+++.+|+++-..|+||||++++++|.+....||++
T Consensus        24 feigr~LgkgkFG~vYlarek--ks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil  101 (281)
T KOG0580|consen   24 FEIGRPLGKGKFGNVYLAREK--KSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL  101 (281)
T ss_pred             ccccccccCCccccEeEeeec--cCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence            346789999999999999887  777799999997653   344578999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||.++|+|...|+.. ..++++.....++.|+|.||.|+|.+   +|+||||||+|+|++     ..+..||+|||-+..
T Consensus       102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg-----~~~~lkiAdfGwsV~  173 (281)
T KOG0580|consen  102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLG-----SAGELKIADFGWSVH  173 (281)
T ss_pred             EecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccC-----CCCCeeccCCCceee
Confidence            999999999999744 45678888899999999999999999   999999999999998     888999999999886


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ..   .......+||..|.|||...+..++.+.|+|++|++.||++.|.+||+.....+...+            +..  
T Consensus       174 ~p---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkr------------I~k--  236 (281)
T KOG0580|consen  174 AP---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKR------------IRK--  236 (281)
T ss_pred             cC---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHH------------HHH--
Confidence            43   2334457899999999999999999999999999999999999999986542221111            100  


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                              .+...+........++|.+|+..+|.+|.+..|++++
T Consensus       237 --------~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  237 --------VDLKFPSTISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             --------ccccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence                    0111112334567789999999999999999999875

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=3.6e-37  Score=338.65  Aligned_cols=262  Identities=27%  Similarity=0.409  Sum_probs=203.4

Q ss_pred             HHHhhcccccccccccceEEEEEEec---cCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecCC
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEED  560 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~  560 (788)
                      ....+.+.+.||+|+||.||+|+...   ......||+|.+.... ....+.+.+|+++++.+ +||||+++++++.+.+
T Consensus        36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~  115 (374)
T cd05106          36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG  115 (374)
T ss_pred             cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence            34456778999999999999998642   2334579999986532 33456788999999999 8999999999999999


Q ss_pred             eEEEEEecCCCCCHhHhhhccC----------------------------------------------------------
Q 047157          561 KRLLVYELMPNGTLSNFLFHEG----------------------------------------------------------  582 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~----------------------------------------------------------  582 (788)
                      ..++||||+++|+|.+++....                                                          
T Consensus       116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (374)
T cd05106         116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS  195 (374)
T ss_pred             CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence            9999999999999999985421                                                          


Q ss_pred             -----------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCC
Q 047157          583 -----------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT  651 (788)
Q Consensus       583 -----------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~  651 (788)
                                 ..+++..+..++.||+.||.|||++   +|+||||||+|||++     ++..+||+|||++........
T Consensus       196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~-----~~~~~kL~DfGla~~~~~~~~  267 (374)
T cd05106         196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLT-----DGRVAKICDFGLARDIMNDSN  267 (374)
T ss_pred             cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEe-----CCCeEEEeeceeeeeccCCcc
Confidence                       2367788899999999999999998   999999999999998     778999999999986543322


Q ss_pred             cc-cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          652 RT-DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       652 ~~-~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      .. .....++..|+|||++.+..++.++||||||+++|||++ |+.||.......       ....    ....+ ... 
T Consensus       268 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-------~~~~----~~~~~-~~~-  334 (374)
T cd05106         268 YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-------KFYK----MVKRG-YQM-  334 (374)
T ss_pred             eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-------HHHH----HHHcc-cCc-
Confidence            11 122335668999999998899999999999999999997 999996532111       0000    01000 000 


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                             .........+.+++.+||+.||++|||+.+|+++|+++.
T Consensus       335 -------~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         335 -------SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             -------cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence                   000112356888999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-37  Score=344.12  Aligned_cols=257  Identities=21%  Similarity=0.255  Sum_probs=210.7

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC-ccccceEeeE-Eec------CCe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVRLLGF-CSE------EDK  561 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~-~~~------~~~  561 (788)
                      ..+.++|.+|||+.||.|...  ..+..+|+|++-...+...+.+.+|+++|++|. |+|||.+++. ...      .-+
T Consensus        39 v~V~~vLAEGGFa~VYla~~~--~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E  116 (738)
T KOG1989|consen   39 VTVEKVLAEGGFAQVYLAQDV--KGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE  116 (738)
T ss_pred             EEEEEEEccCCcEEEEEEEec--CCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence            456789999999999999986  444799999987777888899999999999996 9999999993 211      236


Q ss_pred             EEEEEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          562 RLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      .+|.||||.+|.|-+++..+ ...+++.++++|+.|+++|+++||.. +++|||||||-+||||.     .+++.||+||
T Consensus       117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls-----~~g~~KLCDF  190 (738)
T KOG1989|consen  117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLS-----ADGNYKLCDF  190 (738)
T ss_pred             EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEc-----CCCCEEeCcc
Confidence            78999999999999999654 45599999999999999999999985 77899999999999998     8889999999


Q ss_pred             CCccccCCCCCcc--------cccccCCccccCcccc---cCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccc
Q 047157          641 GISKLLNKDQTRT--------DTNMRGTMGYVAPEWL---RNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEV  709 (788)
Q Consensus       641 g~a~~~~~~~~~~--------~~~~~gt~~y~aPE~~---~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~  709 (788)
                      |.+..........        .-...-|+.|+|||.+   .+.++++|+|||+|||+||-|+....||+......     
T Consensus       191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la-----  265 (738)
T KOG1989|consen  191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA-----  265 (738)
T ss_pred             cccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee-----
Confidence            9987543222110        1113468999999987   67899999999999999999999999998653222     


Q ss_pred             hhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCCC
Q 047157          710 DIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVG  778 (788)
Q Consensus       710 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~~  778 (788)
                                         ++...-.......+..+|.+||..||++||.+||++-+|+..+.++...+
T Consensus       266 -------------------Ilng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~  315 (738)
T KOG1989|consen  266 -------------------ILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP  315 (738)
T ss_pred             -------------------EEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence                               22223333334578899999999999999999999999999998776543

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=1.6e-37  Score=324.34  Aligned_cols=251  Identities=34%  Similarity=0.566  Sum_probs=196.9

Q ss_pred             ccccccccccceEEEEEEe--ccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          492 FSKLVGTGSSGKVYRGILR--LKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       492 ~~~~lg~G~~g~Vy~~~~~--~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      +.+.||.|.||.||+|.+.  ....+..|+||.+.... ....+.+.+|++.+++++||||++++|++...+..++|+||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            4678999999999999998  45567789999996432 44578999999999999999999999999988889999999


Q ss_pred             CCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          569 MPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       569 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      +++|+|.++|... ...+++..++.|+.||++||.|||++   +++|++|+++||+++     .++.+||+|||++....
T Consensus        83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~-----~~~~~Kl~~f~~~~~~~  154 (259)
T PF07714_consen   83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLD-----SNGQVKLSDFGLSRPIS  154 (259)
T ss_dssp             -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEE-----TTTEEEEESTTTGEETT
T ss_pred             cccccccccccccccccccccccccccccccccccccccc---ccccccccccccccc-----ccccccccccccccccc
Confidence            9999999999876 67789999999999999999999999   999999999999999     88899999999998763


Q ss_pred             CCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          648 KDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       648 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      .... ...........|+|||.+....++.++||||||+++|||++ |+.||......+            .........
T Consensus       155 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~------------~~~~~~~~~  222 (259)
T PF07714_consen  155 EKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE------------IIEKLKQGQ  222 (259)
T ss_dssp             TSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH------------HHHHHHTTE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc------------ccccccccc
Confidence            2222 22233456778999999998889999999999999999999 678876442211            111111111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                      .         ..........+.+++..||+.||++|||++++++.|
T Consensus       223 ~---------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  223 R---------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             E---------TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             c---------ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            1         011112345678899999999999999999999886

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=5.1e-37  Score=331.26  Aligned_cols=243  Identities=26%  Similarity=0.289  Sum_probs=196.6

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMP  570 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~  570 (788)
                      +.||+|+||.||++...  .++..||+|.+....   ......+.+|++++++++||||+++++++...+..++||||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~   78 (323)
T cd05571           1 KLLGKGTFGKVILVREK--ATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYAN   78 (323)
T ss_pred             CeeeeCCCeEEEEEEEC--CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCC
Confidence            46899999999999876  667799999987543   2334567899999999999999999999999999999999999


Q ss_pred             CCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCC
Q 047157          571 NGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ  650 (788)
Q Consensus       571 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~  650 (788)
                      +++|.+++... ..+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||+++......
T Consensus        79 ~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~-----~~~~~kl~DfG~a~~~~~~~  149 (323)
T cd05571          79 GGELFFHLSRE-RVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLD-----KDGHIKITDFGLCKEGISDG  149 (323)
T ss_pred             CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEEC-----CCCCEEEeeCCCCcccccCC
Confidence            99999998654 5678999999999999999999999   999999999999998     78899999999987532221


Q ss_pred             CcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccc
Q 047157          651 TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLV  730 (788)
Q Consensus       651 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  730 (788)
                       .......||+.|+|||++.+..++.++|||||||++|||++|+.||........            ........     
T Consensus       150 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~------------~~~~~~~~-----  211 (323)
T cd05571         150 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL------------FELILMEE-----  211 (323)
T ss_pred             -CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHH------------HHHHHcCC-----
Confidence             122345689999999999999999999999999999999999999965422110            01111111     


Q ss_pred             cCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 047157          731 SHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIHM  770 (788)
Q Consensus       731 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~  770 (788)
                         ...  .......+.+++.+||+.||++||     ++.+++++
T Consensus       212 ---~~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  251 (323)
T cd05571         212 ---IRF--PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH  251 (323)
T ss_pred             ---CCC--CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence               000  112345678899999999999999     79998763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-36  Score=319.02  Aligned_cols=258  Identities=28%  Similarity=0.479  Sum_probs=207.0

Q ss_pred             HhhcccccccccccceEEEEEEecc-Ccceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ..+.+.+.||+|+||+||+|.++.. .....|++|.+.... .....++.+|+.++++++||||+++++++.+.+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            4567789999999999999988643 235689999886543 34456889999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++......+++..+..++.|++.||.|||++   +|+|+||||+||+++     +++.+||+|||++..
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~-----~~~~~~l~dfg~~~~  155 (266)
T cd05033          84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVN-----SNLVCKVSDFGLSRR  155 (266)
T ss_pred             EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEc-----CCCCEEECccchhhc
Confidence            999999999999977666789999999999999999999998   999999999999998     788999999999987


Q ss_pred             cCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          646 LNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       646 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ...... .......++..|+|||.+.+..++.++||||||+++|||++ |..||......+        .    ......
T Consensus       156 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~--------~----~~~~~~  223 (266)
T cd05033         156 LEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD--------V----IKAVED  223 (266)
T ss_pred             ccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH--------H----HHHHHc
Confidence            752221 11122334678999999998899999999999999999998 999985432111        0    011111


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      ...         ........+.+.+++.+||+.+|++||+++||+++|+++
T Consensus       224 ~~~---------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         224 GYR---------LPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             CCC---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            100         000112345688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=9.8e-37  Score=319.19  Aligned_cols=256  Identities=26%  Similarity=0.416  Sum_probs=205.8

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ...+.+.+.||+|+||.||+|...  ..+..|++|.+... ....+++.+|++++++++||||+++++++..++..++||
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~--~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (263)
T cd05052           5 RTDITMKHKLGGGQYGEVYEGVWK--KYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   81 (263)
T ss_pred             hHHeEEeeecCCcccceEEEEEEe--cCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence            344667789999999999999987  56778999998754 334567899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+++++|.+++... ...+++..++.++.|+++||+|||++   +++||||||+||+++     +++.+||+|||++..
T Consensus        82 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~-----~~~~~kl~df~~~~~  153 (263)
T cd05052          82 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVG-----ENHLVKVADFGLSRL  153 (263)
T ss_pred             EeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEc-----CCCcEEeCCCccccc
Confidence            999999999999654 34578999999999999999999998   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ..............+..|+|||.+.+..++.++||||||+++|||++ |..||......+.            .......
T Consensus       154 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~------------~~~~~~~  221 (263)
T cd05052         154 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------------YELLEKG  221 (263)
T ss_pred             cccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH------------HHHHHCC
Confidence            65433222222334568999999999999999999999999999998 8899865422111            0111110


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                       .        ...........+.+++.+||+.||++||++.+++++|+.+
T Consensus       222 -~--------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         222 -Y--------RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             -C--------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence             0        0001112346788899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.7e-37  Score=331.08  Aligned_cols=252  Identities=25%  Similarity=0.287  Sum_probs=202.5

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      |.+.+.||+|+||.||+|...  .++..||+|++....   ....+.+.+|++++..++||||+++++++.+.+..++||
T Consensus         3 y~~~~~ig~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           3 FQILTQVGQGGYGQVFLAKKK--DTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             cEEEEEEeecCCeEEEEEEEC--CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            567789999999999999886  567799999987543   234467889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++...
T Consensus        81 e~~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~-----~~~~~kL~Dfg~a~~~  151 (333)
T cd05600          81 EYVPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLID-----ASGHIKLTDFGLSKGI  151 (333)
T ss_pred             eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEC-----CCCCEEEEeCcCCccc
Confidence            999999999999644 4678889999999999999999999   999999999999998     7889999999999865


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      ..    ......|++.|+|||++.+..++.++|||||||++|||++|+.||......+...    .+..+          
T Consensus       152 ~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~----~i~~~----------  213 (333)
T cd05600         152 VT----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWE----NLKYW----------  213 (333)
T ss_pred             cc----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHH----HHHhc----------
Confidence            43    2234568999999999999999999999999999999999999997643221110    00000          


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ...+...............+.+++.+||+.+|++||+++|++++
T Consensus       214 ~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         214 KETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             cccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            00000000000012235677889999999999999999999975

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=6.5e-37  Score=331.64  Aligned_cols=272  Identities=22%  Similarity=0.325  Sum_probs=204.4

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ...|.+.+.||+|+||.||++...  .++..+|+|.+.... ....+.+.+|++++++++||||+++++++..++..++|
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHK--PSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   81 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEEC--CCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            345667789999999999999886  667789999887542 34456899999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++... ..+++..+..++.|++.||.|||++  .+|+||||||+|||++     .++.+||+|||++..
T Consensus        82 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~-----~~~~~kl~Dfg~~~~  153 (331)
T cd06649          82 MEHMDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVN-----SRGEIKLCDFGVSGQ  153 (331)
T ss_pred             eecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEc-----CCCcEEEccCccccc
Confidence            9999999999998654 4678899999999999999999985  2599999999999998     778999999999876


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhH-------HHHH
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS-------DWVI  718 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~-------~~~~  718 (788)
                      .....   .....|+..|+|||++.+..++.++||||||+++|||++|+.||......+..........       ....
T Consensus       154 ~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (331)
T cd06649         154 LIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSIS  230 (331)
T ss_pred             ccccc---cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccC
Confidence            54322   2235689999999999999999999999999999999999999965432111000000000       0000


Q ss_pred             HH-------------------hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          719 SC-------------------MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       719 ~~-------------------~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                      ..                   ........+...............++.+++.+||+.||++|||++|++++-
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~  302 (331)
T cd06649         231 PRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT  302 (331)
T ss_pred             cccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence            00                   000000000000011111112456788999999999999999999998753

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=1e-36  Score=317.74  Aligned_cols=252  Identities=26%  Similarity=0.440  Sum_probs=201.0

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      ..+.+.+.||+|+||.||++..+   .+..+++|.+... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~---~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e   79 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWR---AQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTE   79 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEec---cCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEE
Confidence            34567789999999999999874   3457999987643 2234678899999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++++|.+++......+++..+..++.|++.||.|||++   +|+|+||||+||+++     .++.+||+|||.+....
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~-----~~~~~kl~d~g~~~~~~  151 (256)
T cd05114          80 FMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVS-----STGVVKVSDFGMTRYVL  151 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEc-----CCCeEEECCCCCccccC
Confidence            9999999999976555689999999999999999999999   999999999999998     77899999999988654


Q ss_pred             CCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      ...........++..|+|||.+.+..++.++||||||+++|||++ |+.||......+.        ..    .......
T Consensus       152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~--------~~----~i~~~~~  219 (256)
T cd05114         152 DDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEV--------VE----MISRGFR  219 (256)
T ss_pred             CCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHH--------HH----HHHCCCC
Confidence            332222222345668999999998899999999999999999999 8899865422111        00    0111100


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                        .  ..+     ......+.+++.+||+.+|++||+++|+++.|.
T Consensus       220 --~--~~~-----~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~  256 (256)
T cd05114         220 --L--YRP-----KLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT  256 (256)
T ss_pred             --C--CCC-----CCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence              0  011     112356889999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-37  Score=319.31  Aligned_cols=254  Identities=26%  Similarity=0.273  Sum_probs=200.8

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchH--------------HHHHHHHHHHHHhcCCCccccceEe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE--------------KTNEEFMTELKIIGRTHHKNLVRLL  553 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~--------------~~~~~~~~E~~~l~~l~hpniv~~~  553 (788)
                      .+|.+.+.||+|.||.|-+|...  ..++.||||++.+...              ...+...+|+.+|++++|||||+++
T Consensus        97 Nqy~l~~eiG~G~yGkVkLar~~--~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li  174 (576)
T KOG0585|consen   97 NQYELIKEIGSGQYGKVKLARDE--VDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI  174 (576)
T ss_pred             hheehhhhhcCCccceEEEEeec--CCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence            45777899999999999999887  6777999999965321              1125788999999999999999999


Q ss_pred             eEEec--CCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCC
Q 047157          554 GFCSE--EDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDT  631 (788)
Q Consensus       554 ~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~  631 (788)
                      ++..+  .+.+|||+|||..|.+...-. ....++..+..++++++..||+|||.+   +||||||||+|+||+     +
T Consensus       175 EvLDDP~s~~~YlVley~s~G~v~w~p~-d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~-----~  245 (576)
T KOG0585|consen  175 EVLDDPESDKLYLVLEYCSKGEVKWCPP-DKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLS-----S  245 (576)
T ss_pred             EeecCcccCceEEEEEeccCCccccCCC-CcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEc-----C
Confidence            99976  458999999999888764331 122388999999999999999999999   999999999999999     8


Q ss_pred             CCcEEEeecCCccccCCCC----CcccccccCCccccCcccccCCC----CCccCcchhhHHHHHHHHhCCCCCCccccc
Q 047157          632 NYMAKISDFGISKLLNKDQ----TRTDTNMRGTMGYVAPEWLRNVP----VTTKVDVFSFGVMLLEIICGRRHIELSRVE  703 (788)
Q Consensus       632 ~~~~kL~Dfg~a~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~----~s~k~DVwSlGvil~elltg~~p~~~~~~~  703 (788)
                      ++++||+|||.+.......    ........||+.|+|||...++.    .+.+.||||+||+||-|+.|+.||......
T Consensus       246 ~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~  325 (576)
T KOG0585|consen  246 DGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL  325 (576)
T ss_pred             CCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH
Confidence            8999999999998763321    11223468999999999886632    346899999999999999999999765322


Q ss_pred             cccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          704 EESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       704 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                      +.            .        ..++...+......+..+.+.+|++++|+.||++|.+..+|..+.-
T Consensus       326 ~l------------~--------~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw  374 (576)
T KOG0585|consen  326 EL------------F--------DKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW  374 (576)
T ss_pred             HH------------H--------HHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence            11            1        1122222333333356678889999999999999999999987663

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=1.3e-36  Score=322.53  Aligned_cols=270  Identities=20%  Similarity=0.221  Sum_probs=202.3

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .|.+.+.||+|+||.||+++.+  .++..+|+|++....  ....+.+.+|++++++++||||+++++++..++..++||
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHK--ETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF   79 (287)
T ss_pred             CceEEEEecccCCEEEEEEEEC--CCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence            3567789999999999999886  667789999886432  334567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||++++.|..+. .....+++..+..++.||+.||.|||+.   +|+||||||+||+++     .++.+||+|||++...
T Consensus        80 e~~~~~~l~~~~-~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~-----~~~~~kl~Dfg~~~~~  150 (287)
T cd07848          80 EYVEKNMLELLE-EMPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLIS-----HNDVLKLCDFGFARNL  150 (287)
T ss_pred             ecCCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEc-----CCCcEEEeeccCcccc
Confidence            999987776544 3445688999999999999999999998   999999999999998     7789999999999876


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh----hHHHHHHHhh
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV----LSDWVISCML  722 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~  722 (788)
                      ............+++.|+|||++.+..++.++|||||||++|||++|+.||......+........    ..........
T Consensus       151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (287)
T cd07848         151 SEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYS  230 (287)
T ss_pred             cccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhc
Confidence            543333333456899999999999889999999999999999999999999764322111000000    0000000000


Q ss_pred             cccccccccCCCCCcc------cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          723 SRNLQVLVSHDPEVLS------DLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~------~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .........+......      .......+.+++.+||+.||++|||++|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         231 NPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             cchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            1111111000000000      0112456889999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=6.8e-37  Score=322.39  Aligned_cols=250  Identities=24%  Similarity=0.303  Sum_probs=200.7

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .+.++||+|+||.||+++-+  +++..+|+|++++..   ....+.++.|-.+|...++|.||+++-.|++.+.+|||||
T Consensus       144 e~Lk~IgkGAfGeVrLarKk--~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiME  221 (550)
T KOG0605|consen  144 ELLKVIGKGAFGEVRLARKK--DTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIME  221 (550)
T ss_pred             hhheeeccccceeEEEEEEc--cCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEE
Confidence            34588999999999999876  889999999998754   3445678899999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |++||++..+|... ..+++.....++.+++-|+..||+.   |+|||||||+|+|||     ..|++||+|||++.-+.
T Consensus       222 ylPGGD~mTLL~~~-~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD-----~~GHiKLSDFGLs~gl~  292 (550)
T KOG0605|consen  222 YLPGGDMMTLLMRK-DTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLID-----AKGHIKLSDFGLSTGLD  292 (550)
T ss_pred             ecCCccHHHHHHhc-CcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeec-----CCCCEeeccccccchhh
Confidence            99999999999665 5677777788889999999999999   999999999999999     89999999999986431


Q ss_pred             C-----------------------CCC-----c-c-----------------cccccCCccccCcccccCCCCCccCcch
Q 047157          648 K-----------------------DQT-----R-T-----------------DTNMRGTMGYVAPEWLRNVPVTTKVDVF  681 (788)
Q Consensus       648 ~-----------------------~~~-----~-~-----------------~~~~~gt~~y~aPE~~~~~~~s~k~DVw  681 (788)
                      .                       +..     . .                 ....+|||.|+|||++.+..|+..+|.|
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW  372 (550)
T KOG0605|consen  293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW  372 (550)
T ss_pred             hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence            1                       000     0 0                 0124599999999999999999999999


Q ss_pred             hhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCC
Q 047157          682 SFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLR  761 (788)
Q Consensus       682 SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R  761 (788)
                      |||||+||||.|-+||......+...    .+..|...              .....+.....+..+||.+|+. ||++|
T Consensus       373 SLG~ImyEmLvGyPPF~s~tp~~T~r----kI~nwr~~--------------l~fP~~~~~s~eA~DLI~rll~-d~~~R  433 (550)
T KOG0605|consen  373 SLGCIMYEMLVGYPPFCSETPQETYR----KIVNWRET--------------LKFPEEVDLSDEAKDLITRLLC-DPENR  433 (550)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHH----HHHHHhhh--------------ccCCCcCcccHHHHHHHHHHhc-CHHHh
Confidence            99999999999999998775544322    22222211              1111122223677889999998 99999


Q ss_pred             C---CHHHHHHH
Q 047157          762 P---SMKKVIHM  770 (788)
Q Consensus       762 P---t~~evl~~  770 (788)
                      .   .++||.++
T Consensus       434 LG~~G~~EIK~H  445 (550)
T KOG0605|consen  434 LGSKGAEEIKKH  445 (550)
T ss_pred             cCcccHHHHhcC
Confidence            6   47777663

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=1.9e-36  Score=320.65  Aligned_cols=256  Identities=28%  Similarity=0.456  Sum_probs=204.6

Q ss_pred             hhcccccccccccceEEEEEEeccC---cceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKD---TQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~---~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      .+.+.+.||+|+||.||+|......   ....|++|.+.... .....++.+|++++.+++||||+++++++...+..++
T Consensus         6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   85 (283)
T cd05048           6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCM   85 (283)
T ss_pred             HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEE
Confidence            4567789999999999999876322   23579999886433 3455678999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCC
Q 047157          565 VYELMPNGTLSNFLFHEG---------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL  629 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~  629 (788)
                      +|||+++++|.+++....               ..+++..++.++.|++.||.|||++   +++|+||||+||+++    
T Consensus        86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~----  158 (283)
T cd05048          86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVG----  158 (283)
T ss_pred             EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEc----
Confidence            999999999999996431               3567889999999999999999999   999999999999998    


Q ss_pred             CCCCcEEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccc
Q 047157          630 DTNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESE  707 (788)
Q Consensus       630 ~~~~~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~  707 (788)
                       +++.+||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|||++ |..||......+.  
T Consensus       159 -~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~--  235 (283)
T cd05048         159 -EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV--  235 (283)
T ss_pred             -CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHH--
Confidence             778999999999986533221 12223456788999999988899999999999999999998 9999875432111  


Q ss_pred             cchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          708 EVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       708 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                                ...+..+...         ......+.++.+|+.+||+.||++||+++||+++|++
T Consensus       236 ----------~~~i~~~~~~---------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         236 ----------IEMIRSRQLL---------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             ----------HHHHHcCCcC---------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence                      1111111111         1122345778899999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.9e-36  Score=316.59  Aligned_cols=257  Identities=26%  Similarity=0.436  Sum_probs=205.4

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      +....+.+.+.||+|++|.||+|...   .+..|++|.++... ...+++.+|++++++++||||+++++++...+..++
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~~---~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   78 (261)
T cd05068           3 IDRTSIQLLRKLGAGQFGEVWEGLWN---NTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYI   78 (261)
T ss_pred             cchhheeeEEEecccCCccEEEEEec---CCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeee
Confidence            44566788899999999999999874   34579999986543 235678899999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          565 VYELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      ||||+++++|.+++.... ..+++..+..++.|++.||.|||+.   +|+|+||||+||+++     .++.+||+|||++
T Consensus        79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~-----~~~~~~l~dfg~~  150 (261)
T cd05068          79 VTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVG-----ENNICKVADFGLA  150 (261)
T ss_pred             eeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEc-----CCCCEEECCcceE
Confidence            999999999999996543 5689999999999999999999998   999999999999998     7889999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ................+..|+|||.+.+..++.++||||||+++|||++ |+.||.......            ......
T Consensus       151 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~------------~~~~~~  218 (261)
T cd05068         151 RVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE------------VLQQVD  218 (261)
T ss_pred             EEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH------------HHHHHH
Confidence            8765332222222233467999999999899999999999999999999 998986532111            011111


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      .. ..        ........+.+.+++.+|++.+|++||++.++++.|++.
T Consensus       219 ~~-~~--------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         219 QG-YR--------MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             cC-CC--------CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence            11 00        001112346788899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.2e-37  Score=325.65  Aligned_cols=244  Identities=23%  Similarity=0.243  Sum_probs=199.1

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      |.+.+.||+|+||.||++...  .++..||+|.+....   ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           3 LERIKTVGTGTFGRVHLVRDR--ISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             ceeeeeeecCCCeEEEEEEEc--CCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            566789999999999999886  567799999986432   234567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++... ..+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||++...
T Consensus        81 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~-----~~~~~kl~Dfg~~~~~  151 (291)
T cd05612          81 EYVPGGELFSYLRNS-GRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLD-----KEGHIKLTDFGFAKKL  151 (291)
T ss_pred             eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEEC-----CCCCEEEEecCcchhc
Confidence            999999999999654 4678889999999999999999999   999999999999998     7789999999999865


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      ....    ....|++.|+|||++.+..++.++||||||+++|||++|+.||......+.            ........ 
T Consensus       152 ~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~------------~~~i~~~~-  214 (291)
T cd05612         152 RDRT----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI------------YEKILAGK-  214 (291)
T ss_pred             cCCc----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------------HHHHHhCC-
Confidence            4321    234689999999999998999999999999999999999999975432111            01111111 


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHHH
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS-----MKKVIHM  770 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~  770 (788)
                             ...  +......+.+++.+||+.||.+||+     ++|++++
T Consensus       215 -------~~~--~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         215 -------LEF--PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             -------cCC--CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence                   110  0112346788999999999999995     8888875

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=9.7e-37  Score=329.87  Aligned_cols=246  Identities=24%  Similarity=0.246  Sum_probs=200.0

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ..|.+.+.||+|+||.||+|...  .++..||+|.+....   ....+.+.+|++++++++||||+++++++.+++..++
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   95 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHK--GTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYF   95 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEEC--CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEE
Confidence            34677899999999999999886  667799999986542   2344678899999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++.
T Consensus        96 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~-----~~~~~kl~Dfg~~~  166 (329)
T PTZ00263         96 LLEFVVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLD-----NKGHVKVTDFGFAK  166 (329)
T ss_pred             EEcCCCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEC-----CCCCEEEeeccCce
Confidence            99999999999999654 4678888889999999999999999   999999999999998     78899999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ......    ....|++.|+|||++.+..++.++|||||||++|||++|+.||........            ......+
T Consensus       167 ~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~------------~~~i~~~  230 (329)
T PTZ00263        167 KVPDRT----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI------------YEKILAG  230 (329)
T ss_pred             EcCCCc----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH------------HHHHhcC
Confidence            654322    235689999999999999999999999999999999999999965422110            1111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS-----MKKVIHM  770 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~  770 (788)
                      ..        ..  +.....++.+++.+||+.||++||+     +++++.+
T Consensus       231 ~~--------~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        231 RL--------KF--PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             Cc--------CC--CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            11        00  0112346778999999999999997     6888754

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4.2e-36  Score=331.29  Aligned_cols=265  Identities=20%  Similarity=0.207  Sum_probs=197.0

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ...|.+.++||+|+||.||++...  .++..||+|....      ..+.+|++++++++||||+++++++......++|+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~--~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~  162 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDN--KTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL  162 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEEC--CCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence            345777899999999999999886  6777999997542      35678999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      |++. ++|.+++... ..+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++...
T Consensus       163 e~~~-~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~-----~~~~vkL~DFG~a~~~  232 (391)
T PHA03212        163 PRYK-TDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFIN-----HPGDVCLGDFGAACFP  232 (391)
T ss_pred             ecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEc-----CCCCEEEEeCCccccc
Confidence            9985 7888888554 5678999999999999999999999   999999999999998     7789999999999754


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHH-------
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVIS-------  719 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------  719 (788)
                      ............||+.|+|||++.+..++.++|||||||++|||++|+.||...............+......       
T Consensus       233 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~  312 (391)
T PHA03212        233 VDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNE  312 (391)
T ss_pred             ccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhh
Confidence            3322222334578999999999999999999999999999999999998875432111000000000000000       


Q ss_pred             ----------Hhhcccccccc---cCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          720 ----------CMLSRNLQVLV---SHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       720 ----------~~~~~~~~~l~---~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                                ...........   ...+...........+.+++.+||+.||++|||++|+++
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        313 FPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             cCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence                      00000000000   000000111233457889999999999999999999985

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-36  Score=326.09  Aligned_cols=240  Identities=26%  Similarity=0.285  Sum_probs=193.4

Q ss_pred             ccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCC
Q 047157          496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       496 lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      ||+|+||.||++...  .++..||+|.+....   ......+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus         1 lg~G~~g~Vy~~~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   78 (312)
T cd05585           1 IGKGSFGKVMQVRKR--DTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGG   78 (312)
T ss_pred             CCcCCCeEEEEEEEC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCC
Confidence            699999999999886  567789999986532   334567889999999999999999999999999999999999999


Q ss_pred             CHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCc
Q 047157          573 TLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR  652 (788)
Q Consensus       573 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~  652 (788)
                      +|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++....... .
T Consensus        79 ~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~-----~~~~~kl~Dfg~~~~~~~~~-~  148 (312)
T cd05585          79 ELFHHLQRE-GRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLD-----YQGHIALCDFGLCKLNMKDD-D  148 (312)
T ss_pred             cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEEC-----CCCcEEEEECcccccCccCC-C
Confidence            999999654 5688899999999999999999999   999999999999998     78899999999987543222 1


Q ss_pred             ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccC
Q 047157          653 TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSH  732 (788)
Q Consensus       653 ~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  732 (788)
                      ......||+.|+|||.+.+..++.++|||||||++|||++|+.||......+.           . ......        
T Consensus       149 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~-----------~-~~~~~~--------  208 (312)
T cd05585         149 KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEM-----------Y-RKILQE--------  208 (312)
T ss_pred             ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHH-----------H-HHHHcC--------
Confidence            22345689999999999999999999999999999999999999975422110           0 011111        


Q ss_pred             CCCCcccHHHHHHHHHHHhHccCCCCCCCCC---HHHHHH
Q 047157          733 DPEVLSDLERFERMAMVGLWCNHPDPNLRPS---MKKVIH  769 (788)
Q Consensus       733 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt---~~evl~  769 (788)
                      ....  +......+.+++.+||+.||++||+   +.|++.
T Consensus       209 ~~~~--~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         209 PLRF--PDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             CCCC--CCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence            1111  1123456788999999999999985   566654

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=2e-36  Score=327.09  Aligned_cols=243  Identities=27%  Similarity=0.299  Sum_probs=196.7

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMP  570 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~  570 (788)
                      +.||+|+||.||++...  .++..||+|.+....   ......+.+|+++++.++||||+++++++...+..++||||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~   78 (328)
T cd05593           1 KLLGKGTFGKVILVREK--ASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVN   78 (328)
T ss_pred             CeeeeCCCEEEEEEEEC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCC
Confidence            46899999999999876  667799999987542   2345678899999999999999999999999999999999999


Q ss_pred             CCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCC
Q 047157          571 NGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ  650 (788)
Q Consensus       571 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~  650 (788)
                      +++|..++... ..+++.++..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||++.......
T Consensus        79 ~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~-----~~~~~kL~DfG~~~~~~~~~  149 (328)
T cd05593          79 GGELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLD-----KDGHIKITDFGLCKEGITDA  149 (328)
T ss_pred             CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEEC-----CCCcEEEecCcCCccCCCcc
Confidence            99999888554 5688999999999999999999999   999999999999998     78899999999987543221


Q ss_pred             CcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccc
Q 047157          651 TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLV  730 (788)
Q Consensus       651 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  730 (788)
                       .......|++.|+|||.+.+..++.++|||||||++|||++|+.||......+..            ......      
T Consensus       150 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~------------~~~~~~------  210 (328)
T cd05593         150 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF------------ELILME------  210 (328)
T ss_pred             -cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHH------------HHhccC------
Confidence             1223356899999999999989999999999999999999999999754221110            001000      


Q ss_pred             cCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 047157          731 SHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIHM  770 (788)
Q Consensus       731 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~  770 (788)
                        ....  +......+.+++.+||+.||++||     +++|++++
T Consensus       211 --~~~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         211 --DIKF--PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             --CccC--CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence              0000  112245678899999999999997     89999865

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=8.2e-37  Score=324.28  Aligned_cols=270  Identities=21%  Similarity=0.255  Sum_probs=199.8

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .|.+.++||+|+||+||+|...  .++..||+|.++... ......+.+|++++++++||||+++++++.+++..++|||
T Consensus         6 ~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (288)
T cd07871           6 TYVKLDKLGEGTYATVFKGRSK--LTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE   83 (288)
T ss_pred             cceEeeEEecCCCEEEEEEEEC--CCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence            3667789999999999999876  567799999886432 2234567899999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++ +|.+++...+..+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||++....
T Consensus        84 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~-----~~~~~kl~DfG~~~~~~  154 (288)
T cd07871          84 YLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLIN-----EKGELKLADFGLARAKS  154 (288)
T ss_pred             CCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEC-----CCCCEEECcCcceeecc
Confidence            9974 99999877666788999999999999999999999   999999999999998     77899999999987643


Q ss_pred             CCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhH---HHHHHHhh-
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS---DWVISCML-  722 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~-  722 (788)
                      .... ......+++.|+|||.+.+ ..++.++||||+|+++|||++|+.||......+..........   .-.+.... 
T Consensus       155 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (288)
T cd07871         155 VPTK-TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITS  233 (288)
T ss_pred             CCCc-cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhcccc
Confidence            2221 2233467899999998865 5689999999999999999999999976543221110000000   00000000 


Q ss_pred             cccccccccCCCCCcc----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          723 SRNLQVLVSHDPEVLS----DLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~----~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .........+......    .......+.+++.+||+.||.+|||++|++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h  285 (288)
T cd07871         234 NEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH  285 (288)
T ss_pred             chhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            0000000000000000    01123467899999999999999999999853

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=3.6e-36  Score=312.72  Aligned_cols=248  Identities=26%  Similarity=0.411  Sum_probs=198.0

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      +.||+|+||.||+|...  .++..+++|.+.... ......+.+|++++++++||||+++++++......++||||++++
T Consensus         1 ~~lg~g~~g~vy~~~~~--~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (252)
T cd05084           1 ERIGRGNFGEVFSGRLR--ADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG   78 (252)
T ss_pred             CccCcccCccEEEEEEe--cCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence            46899999999999886  567789999876433 445568999999999999999999999999999999999999999


Q ss_pred             CHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCc
Q 047157          573 TLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR  652 (788)
Q Consensus       573 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~  652 (788)
                      +|.+++......+++..++.++.|++.||.|||++   +|+|+||||+||+++     .++.+||+|||++.........
T Consensus        79 ~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~-----~~~~~kl~dfg~~~~~~~~~~~  150 (252)
T cd05084          79 DFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVT-----EKNVLKISDFGMSREEEDGVYA  150 (252)
T ss_pred             cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEc-----CCCcEEECccccCccccccccc
Confidence            99999976666789999999999999999999999   999999999999998     7788999999998765432111


Q ss_pred             cc-ccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcccccccc
Q 047157          653 TD-TNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLV  730 (788)
Q Consensus       653 ~~-~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  730 (788)
                      .. .....+..|+|||.+.+..++.++||||||+++|||++ |..||.......            ........      
T Consensus       151 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~------------~~~~~~~~------  212 (252)
T cd05084         151 STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ------------TREAIEQG------  212 (252)
T ss_pred             ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH------------HHHHHHcC------
Confidence            11 11123457999999998899999999999999999997 888886432111            00001000      


Q ss_pred             cCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          731 SHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       731 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                         ............+.+++.+||+.+|++|||+.+|+++|+
T Consensus       213 ---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         213 ---VRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             ---CCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence               000111123457888999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=2.7e-36  Score=315.43  Aligned_cols=255  Identities=23%  Similarity=0.400  Sum_probs=204.1

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ...+.+.++||+|+||.||+|...   .+..|++|.+.... ...+.+.+|+.++++++|+||+++++.+.+.+..++||
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~---~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYN---NSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT   80 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEec---CCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence            445677899999999999999864   44579999886532 23568899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+++++|.+++... ...+++..+..++.|++.||+|||+.   +++|+||||+||+++     .++.+||+|||++..
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~-----~~~~~~l~dfg~~~~  152 (261)
T cd05072          81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVS-----ESLMCKIADFGLARV  152 (261)
T ss_pred             ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEec-----CCCcEEECCCcccee
Confidence            999999999999654 45678899999999999999999998   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .............++..|+|||.+....++.++||||||+++|+|++ |+.||........        ..    .....
T Consensus       153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~--------~~----~~~~~  220 (261)
T cd05072         153 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDV--------MS----ALQRG  220 (261)
T ss_pred             cCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHH--------HH----HHHcC
Confidence            65433222233345678999999988899999999999999999998 9999864321110        01    01111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      .       ..  .........+.+++.+||+.+|++||+++++.+.|+..
T Consensus       221 ~-------~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         221 Y-------RM--PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             C-------CC--CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            0       00  00112345678899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=2.4e-36  Score=319.25  Aligned_cols=258  Identities=28%  Similarity=0.451  Sum_probs=206.0

Q ss_pred             HHhhcccccccccccceEEEEEEecc---CcceeeeeeecccchHH-HHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLK---DTQIEIAVKKLEKDIEK-TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      ..++.+.+.||+|+||.||+|.....   .....||+|.+...... ..+.+.+|++++++++||||+++++++......
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   83 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP   83 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence            45677789999999999999987532   34568999998765433 567899999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccC-------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCC
Q 047157          563 LLVYELMPNGTLSNFLFHEG-------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL  629 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~-------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~  629 (788)
                      ++||||+++++|.+++...+             ..+++..+..++.||+.||.|||++   +++||||||+||+++    
T Consensus        84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~----  156 (280)
T cd05049          84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVG----  156 (280)
T ss_pred             EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEc----
Confidence            99999999999999996542             3467889999999999999999999   999999999999998    


Q ss_pred             CCCCcEEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccc
Q 047157          630 DTNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESE  707 (788)
Q Consensus       630 ~~~~~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~  707 (788)
                       .++.+||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+.  
T Consensus       157 -~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~--  233 (280)
T cd05049         157 -YDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEV--  233 (280)
T ss_pred             -CCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH--
Confidence             788999999999876533221 11223345678999999999999999999999999999998 9999865422111  


Q ss_pred             cchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          708 EVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       708 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                                ......+....         ........+.+++.+||+.||++||++.||++.|++
T Consensus       234 ----------~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         234 ----------IECITQGRLLQ---------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             ----------HHHHHcCCcCC---------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence                      01111111111         011234567899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.4e-37  Score=314.61  Aligned_cols=261  Identities=30%  Similarity=0.349  Sum_probs=196.0

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCC-----eEEEEEe
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED-----KRLLVYE  567 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~~~lV~e  567 (788)
                      .+++|.|+||.||+|+..  .+...||||+.-.+..-    --+|+++|+++.|||||+++-+|....     ...+|||
T Consensus        29 ~~liG~GsFg~Vyq~~~~--e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVle  102 (364)
T KOG0658|consen   29 VRLIGSGSFGVVYQAKLR--ETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLE  102 (364)
T ss_pred             eEEEeecccceEEEEEEc--CCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHH
Confidence            478999999999999998  55679999988654322    127999999999999999998885432     3358999


Q ss_pred             cCCCCCHhHhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          568 LMPNGTLSNFLFH---EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       568 ~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||+. +|.+++++   .+.+++...+.-+..||.+||+|||+.   +|+||||||+|+|+|.    +.+.+||+|||.|+
T Consensus       103 ymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~----~tg~LKicDFGSAK  174 (364)
T KOG0658|consen  103 YMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDP----DTGVLKICDFGSAK  174 (364)
T ss_pred             hchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcC----CCCeEEeccCCcce
Confidence            9975 88888864   356778888888999999999999998   9999999999999994    56899999999999


Q ss_pred             ccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      .+......  .....|..|+|||.+.+ ..|+.+.||||.||++.||+-|+..|.+.+..++..++-..+.....+.+..
T Consensus       175 ~L~~~epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~  252 (364)
T KOG0658|consen  175 VLVKGEPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKS  252 (364)
T ss_pred             eeccCCCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence            88765544  23456889999998865 4799999999999999999999999988755444333222221111111111


Q ss_pred             c-------cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          724 R-------NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       724 ~-------~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .       ....+...............+.++++.++|+.+|.+|.++.|++.
T Consensus       253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence            1       111111111101112233467889999999999999999999985

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=2.4e-36  Score=314.99  Aligned_cols=252  Identities=28%  Similarity=0.444  Sum_probs=202.0

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      ..+.+.+.||+|+||+||+|...   .+..+|+|.+.... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~---~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWR---GQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTE   79 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEec---CCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEE
Confidence            45677889999999999999774   34469999887542 234678999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++++|.+++......+++..++.++.||+.||.|||+.   +++|+||||+||+++     .++.+||+|||.++...
T Consensus        80 ~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~-----~~~~~kl~d~g~~~~~~  151 (256)
T cd05113          80 YMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVD-----DQGCVKVSDFGLSRYVL  151 (256)
T ss_pred             cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEc-----CCCCEEECCCccceecC
Confidence            9999999999977656789999999999999999999999   999999999999998     77899999999988654


Q ss_pred             CCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      ...........++..|+|||.+.+..++.++||||||+++|||++ |+.||......+        .    .........
T Consensus       152 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--------~----~~~~~~~~~  219 (256)
T cd05113         152 DDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE--------T----VEKVSQGLR  219 (256)
T ss_pred             CCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--------H----HHHHhcCCC
Confidence            433222222345678999999988889999999999999999998 999986432111        0    011111100


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                      .    ..     .....+.+.+++.+||+.||++||++.+|++.|+
T Consensus       220 ~----~~-----~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         220 L----YR-----PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             C----CC-----CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            0    00     1112467889999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=4.1e-36  Score=318.96  Aligned_cols=262  Identities=26%  Similarity=0.453  Sum_probs=209.0

Q ss_pred             HHHhhcccccccccccceEEEEEEec---cCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      +...+.+.+.||+|+||.||++....   ...+..+++|.+........+.+.+|++++++++||||+++++++...+..
T Consensus         3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   82 (288)
T cd05093           3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL   82 (288)
T ss_pred             chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence            44566778999999999999997632   234567999999876666677899999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccC------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCC
Q 047157          563 LLVYELMPNGTLSNFLFHEG------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD  630 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~  630 (788)
                      ++||||+++++|.+++...+            ..+++..++.++.|++.||+|||++   +++||||||+||+++     
T Consensus        83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~-----  154 (288)
T cd05093          83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVG-----  154 (288)
T ss_pred             EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEc-----
Confidence            99999999999999986432            2478999999999999999999998   999999999999998     


Q ss_pred             CCCcEEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCcccccccccc
Q 047157          631 TNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEE  708 (788)
Q Consensus       631 ~~~~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~  708 (788)
                      +++.+||+|||++........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+    
T Consensus       155 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~----  230 (288)
T cd05093         155 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE----  230 (288)
T ss_pred             cCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH----
Confidence            788999999999986543221 11222345778999999998899999999999999999998 888886542211    


Q ss_pred             chhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          709 VDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       709 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                              .......+.....    +     ......+.+++.+||+.||.+|||+.||++.|+.+..
T Consensus       231 --------~~~~i~~~~~~~~----~-----~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~  281 (288)
T cd05093         231 --------VIECITQGRVLQR----P-----RTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK  281 (288)
T ss_pred             --------HHHHHHcCCcCCC----C-----CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence                    0111111111110    0     1123568899999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=2.1e-36  Score=326.33  Aligned_cols=243  Identities=27%  Similarity=0.301  Sum_probs=195.7

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMP  570 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~  570 (788)
                      +.||+|+||.||++...  .++..||+|.+....   ......+.+|++++++++||||+++++.+...+..++||||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~   78 (323)
T cd05595           1 KLLGKGTFGKVILVREK--ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN   78 (323)
T ss_pred             CeeeeCCCEEEEEEEEC--CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCC
Confidence            46899999999999876  667799999987543   2344567889999999999999999999999999999999999


Q ss_pred             CCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCC
Q 047157          571 NGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ  650 (788)
Q Consensus       571 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~  650 (788)
                      +++|..++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++.......
T Consensus        79 ~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~-----~~~~~kL~Dfg~~~~~~~~~  149 (323)
T cd05595          79 GGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLD-----KDGHIKITDFGLCKEGISDG  149 (323)
T ss_pred             CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEc-----CCCCEEecccHHhccccCCC
Confidence            99999888554 5688999999999999999999999   999999999999998     78899999999987532221


Q ss_pred             CcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccc
Q 047157          651 TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLV  730 (788)
Q Consensus       651 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  730 (788)
                       .......|++.|+|||++.+..++.++|||||||++|||++|+.||........            .........    
T Consensus       150 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~------------~~~~~~~~~----  212 (323)
T cd05595         150 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL------------FELILMEEI----  212 (323)
T ss_pred             -CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH------------HHHHhcCCC----
Confidence             122235689999999999999999999999999999999999999965422111            000111110    


Q ss_pred             cCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 047157          731 SHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIHM  770 (788)
Q Consensus       731 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~  770 (788)
                          ..  +......+.+++.+||+.||++||     ++.+++++
T Consensus       213 ----~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h  251 (323)
T cd05595         213 ----RF--PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  251 (323)
T ss_pred             ----CC--CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence                00  112245677899999999999998     88888763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=4.4e-36  Score=313.78  Aligned_cols=254  Identities=27%  Similarity=0.462  Sum_probs=207.3

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      ..|.+.++||.|+||.||+|...  . +..+++|.+..........+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus         6 ~~y~~~~~ig~g~~~~vy~~~~~--~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   82 (261)
T cd05148           6 EEFTLERKLGSGYFGEVWEGLWK--N-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE   82 (261)
T ss_pred             HHHHHhhhhccCCCccEEEeEec--C-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence            45677899999999999999986  3 67899999987666567789999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          568 LMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       568 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      |+++++|.+++.+. +..+++..+..++.||+.||.|||++   +|+|+||||+||+++     .++.+||+|||.+...
T Consensus        83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~-----~~~~~kl~d~g~~~~~  154 (261)
T cd05148          83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVG-----EDLVCKVADFGLARLI  154 (261)
T ss_pred             ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEc-----CCceEEEccccchhhc
Confidence            99999999999764 45679999999999999999999998   999999999999998     7889999999999876


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ....... ....++..|+|||.+....++.++||||||+++|+|++ |+.||......+        ....    .... 
T Consensus       155 ~~~~~~~-~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~--------~~~~----~~~~-  220 (261)
T cd05148         155 KEDVYLS-SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE--------VYDQ----ITAG-  220 (261)
T ss_pred             CCccccc-cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH--------HHHH----HHhC-
Confidence            4332222 23345678999999988899999999999999999998 889986543111        0011    1100 


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                              ..........+.+.+++.+||+.||++|||++++++.|+.+
T Consensus       221 --------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         221 --------YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             --------CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence                    00011123345678999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=4.1e-36  Score=371.08  Aligned_cols=270  Identities=24%  Similarity=0.471  Sum_probs=207.2

Q ss_pred             ccCHHHHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEec
Q 047157          479 EFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE  558 (788)
Q Consensus       479 ~~~~~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~  558 (788)
                      .++++++... +...++||+|+||.||+|...  ..+..||||++.....    ....|++.+++++||||++++++|.+
T Consensus       682 ~~~~~~~~~~-~~~~~~ig~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~  754 (968)
T PLN00113        682 SITINDILSS-LKEENVISRGKKGASYKGKSI--KNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRS  754 (968)
T ss_pred             hhhHHHHHhh-CCcccEEccCCCeeEEEEEEC--CCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEc
Confidence            3455555443 344578999999999999876  5677999999865322    12356888999999999999999999


Q ss_pred             CCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEe
Q 047157          559 EDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS  638 (788)
Q Consensus       559 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~  638 (788)
                      .+..++||||+++|+|.+++.    .++|..+.+++.||++||+|||..+.++|+||||||+||+++     .+..+++.
T Consensus       755 ~~~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~-----~~~~~~~~  825 (968)
T PLN00113        755 EKGAYLIHEYIEGKNLSEVLR----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIID-----GKDEPHLR  825 (968)
T ss_pred             CCCCEEEEeCCCCCcHHHHHh----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEEC-----CCCceEEE
Confidence            999999999999999999994    478999999999999999999976667999999999999998     56666665


Q ss_pred             ecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHH
Q 047157          639 DFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVI  718 (788)
Q Consensus       639 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  718 (788)
                       |+........     ....++..|+|||++.+..++.++|||||||++|||++|+.||.....      ......+|..
T Consensus       826 -~~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~------~~~~~~~~~~  893 (968)
T PLN00113        826 -LSLPGLLCTD-----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG------VHGSIVEWAR  893 (968)
T ss_pred             -eccccccccC-----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC------CCCcHHHHHH
Confidence             5554432211     123578899999999999999999999999999999999999853211      1112334443


Q ss_pred             HHhhcccccccccCCCC--CcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          719 SCMLSRNLQVLVSHDPE--VLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       719 ~~~~~~~~~~l~~~~~~--~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ...........+++...  ...+.+...++.+++.+||+.||++||||+||+++|+++..
T Consensus       894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        894 YCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             HhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            33333333333333221  12344566788999999999999999999999999998754

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=3.6e-36  Score=323.78  Aligned_cols=261  Identities=26%  Similarity=0.419  Sum_probs=204.3

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCc--ceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCe
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDT--QIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDK  561 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  561 (788)
                      +....+...+.||+|+||.||+|.+...+.  ...||+|.+.... ....+++.+|+.+++.++||||+++++++... .
T Consensus         4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~   82 (316)
T cd05108           4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T   82 (316)
T ss_pred             cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-C
Confidence            344556777899999999999998753222  3358999986443 44567899999999999999999999998764 5


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      .++|+||+++|+|.+++......+++..++.++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||
T Consensus        83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~-----~~~~~kl~DfG  154 (316)
T cd05108          83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVK-----TPQHVKITDFG  154 (316)
T ss_pred             ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEec-----CCCcEEEcccc
Confidence            7799999999999999987767789999999999999999999999   999999999999998     77899999999


Q ss_pred             CccccCCCCCcc-cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHH
Q 047157          642 ISKLLNKDQTRT-DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVIS  719 (788)
Q Consensus       642 ~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~  719 (788)
                      +++......... ......+..|+|||.+.+..++.++||||||+++|||++ |+.||......+.        .    .
T Consensus       155 ~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~--------~----~  222 (316)
T cd05108         155 LAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--------S----S  222 (316)
T ss_pred             ccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH--------H----H
Confidence            998765433221 112234668999999999999999999999999999997 9999865422110        0    0


Q ss_pred             HhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          720 CMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       720 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ......         ...........+.+++.+||+.||++||++.+++..|..+.
T Consensus       223 ~~~~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~  269 (316)
T cd05108         223 ILEKGE---------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  269 (316)
T ss_pred             HHhCCC---------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            011100         00001112345778999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=7.2e-36  Score=317.59  Aligned_cols=260  Identities=26%  Similarity=0.438  Sum_probs=208.4

Q ss_pred             HhhcccccccccccceEEEEEEec---cCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ..+.+.+.||+|+||.||++....   ......+++|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            445667899999999999997642   23455799999877666666789999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCC
Q 047157          565 VYELMPNGTLSNFLFHEG---------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL  629 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~  629 (788)
                      ||||+++++|.+++....               ..+++..++.++.||+.||+|||++   +|+||||||+||+++    
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~----  157 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVG----  157 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEc----
Confidence            999999999999996432               3478999999999999999999999   999999999999998    


Q ss_pred             CCCCcEEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccc
Q 047157          630 DTNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESE  707 (788)
Q Consensus       630 ~~~~~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~  707 (788)
                       .++.+||+|||++........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+   
T Consensus       158 -~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---  233 (291)
T cd05094         158 -ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE---  233 (291)
T ss_pred             -cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---
Confidence             788999999999976543221 12223456788999999999999999999999999999998 999986542211   


Q ss_pred             cchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          708 EVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       708 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                               .......+.....         ....+..+.+++.+||+.||++|||+++|+++|+.+..
T Consensus       234 ---------~~~~~~~~~~~~~---------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         234 ---------VIECITQGRVLER---------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             ---------HHHHHhCCCCCCC---------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence                     1111111111110         11234568899999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=6.6e-38  Score=297.74  Aligned_cols=254  Identities=22%  Similarity=0.297  Sum_probs=204.7

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ..|.+.++||+|.|+.||+..+.  .+++..|+|.+...  .....+++.+|+++-+.|+||||+++.+.+.+....|||
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~--~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv   88 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHK--TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   88 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhc--cchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence            45667789999999999998876  77788888887532  344677899999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      +|+|+|++|..-+..+ ...++...-..++||+++|.|+|.+   +|||||+||+|+|+..+.  ..-.+||+|||+|..
T Consensus        89 Fe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~--~~A~vKL~~FGvAi~  162 (355)
T KOG0033|consen   89 FDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKA--KGAAVKLADFGLAIE  162 (355)
T ss_pred             EecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeecc--CCCceeecccceEEE
Confidence            9999999998776544 4457778888999999999999999   999999999999997554  556799999999998


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      +.  .......+.||++|||||+++..+|+..+|||+.|||||-|+.|..||.+.+.....            +.+..+.
T Consensus       163 l~--~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rly------------e~I~~g~  228 (355)
T KOG0033|consen  163 VN--DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY------------EQIKAGA  228 (355)
T ss_pred             eC--CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHH------------HHHhccc
Confidence            87  223334578999999999999999999999999999999999999999874332211            1111111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                          .+-++...  ....++..+|+.+||..||++|.|+.|.+.
T Consensus       229 ----yd~~~~~w--~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  229 ----YDYPSPEW--DTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             ----cCCCCccc--CcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence                11111111  123456778999999999999999999875

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=4e-36  Score=331.69  Aligned_cols=261  Identities=25%  Similarity=0.387  Sum_probs=202.8

Q ss_pred             HhhcccccccccccceEEEEEEecc---Ccceeeeeeecccch-HHHHHHHHHHHHHhcCCC-ccccceEeeEEecCCeE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLK---DTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~  562 (788)
                      ..+.+.++||+|+||.||+|.....   .....||||++.... ....+.+.+|+++++++. ||||+++++++.+.+..
T Consensus        37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~  116 (400)
T cd05105          37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPI  116 (400)
T ss_pred             cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCce
Confidence            3456678999999999999986421   223479999996433 334567999999999996 99999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccC------------------------------------------------------------
Q 047157          563 LLVYELMPNGTLSNFLFHEG------------------------------------------------------------  582 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~------------------------------------------------------------  582 (788)
                      +|||||+++|+|.+++.+..                                                            
T Consensus       117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (400)
T cd05105         117 YIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKE  196 (400)
T ss_pred             EEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhh
Confidence            99999999999999885421                                                            


Q ss_pred             -----------------------------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccC
Q 047157          583 -----------------------------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLK  627 (788)
Q Consensus       583 -----------------------------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  627 (788)
                                                         ..+++..+..++.||+.||.|||+.   +|+||||||+|||++  
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~--  271 (400)
T cd05105         197 ASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLA--  271 (400)
T ss_pred             hhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEe--
Confidence                                               2367778889999999999999998   999999999999998  


Q ss_pred             CCCCCCcEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccc
Q 047157          628 TLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEE  705 (788)
Q Consensus       628 ~~~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~  705 (788)
                         .+..+||+|||++......... ......++..|+|||.+.+..++.++||||||+++|||++ |..||........
T Consensus       272 ---~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~  348 (400)
T cd05105         272 ---QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST  348 (400)
T ss_pred             ---CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH
Confidence               7788999999999865432221 1222346778999999998899999999999999999997 8899864321110


Q ss_pred             cccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          706 SEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       706 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                                 .......+.         ...........+.+++.+||+.||++||++.+|.++|+.+.+
T Consensus       349 -----------~~~~~~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         349 -----------FYNKIKSGY---------RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             -----------HHHHHhcCC---------CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence                       001111110         000112234678899999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=3e-36  Score=326.90  Aligned_cols=249  Identities=25%  Similarity=0.300  Sum_probs=200.8

Q ss_pred             HHHhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      ....|.+.+.||+|+||.||+|.... .....||+|.+....   ....+.+.+|+++++.++||||+++++++.+++..
T Consensus        28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~  106 (340)
T PTZ00426         28 KYEDFNFIRTLGTGSFGRVILATYKN-EDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYL  106 (340)
T ss_pred             ChhhcEEEEEEeecCCeEEEEEEEEC-CCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEE
Confidence            34457788999999999999998752 223589999886532   23456788999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||+++|+|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+
T Consensus       107 ~lv~Ey~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~-----~~~~ikL~DFG~  177 (340)
T PTZ00426        107 YLVLEFVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLD-----KDGFIKMTDFGF  177 (340)
T ss_pred             EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEEC-----CCCCEEEecCCC
Confidence            9999999999999999654 4688899999999999999999999   999999999999998     788999999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      +......    .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......            ......
T Consensus       178 a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~------------~~~~i~  241 (340)
T PTZ00426        178 AKVVDTR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL------------IYQKIL  241 (340)
T ss_pred             CeecCCC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH------------HHHHHh
Confidence            9865432    123568999999999999889999999999999999999999997542211            011111


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIHM  770 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~  770 (788)
                      .....     .+     ......+.+++.+||+.||++|+     ++++++++
T Consensus       242 ~~~~~-----~p-----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        242 EGIIY-----FP-----KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             cCCCC-----CC-----CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence            11110     01     11234567899999999999995     89998875

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-36  Score=307.36  Aligned_cols=266  Identities=24%  Similarity=0.305  Sum_probs=204.0

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEec-----CCeEEEE
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE-----EDKRLLV  565 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~~~lV  565 (788)
                      .+.||+|+||.|..+..+  .++..||||++...  .....++..+|+++|+.++|+||+.+++++..     -+..|+|
T Consensus        27 ~~~iG~GAyGvVcsA~~~--~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV  104 (359)
T KOG0660|consen   27 IEPIGRGAYGVVCSAKDK--RTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLV  104 (359)
T ss_pred             cccccCcceeeEEEEEEc--CCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEe
Confidence            467999999999999988  66789999999733  34456788999999999999999999998855     4578999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      +|+| ..+|.+.++.. +.++...+..++.||++||.|+|+.   +|+||||||+|+|++     .+..+||+|||+|+.
T Consensus       105 ~elM-etDL~~iik~~-~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n-----~~c~lKI~DFGLAR~  174 (359)
T KOG0660|consen  105 FELM-ETDLHQIIKSQ-QDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLN-----ADCDLKICDFGLARY  174 (359)
T ss_pred             hhHH-hhHHHHHHHcC-ccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeec-----cCCCEEeccccceee
Confidence            9999 66888888544 5588889999999999999999999   999999999999998     888899999999998


Q ss_pred             cCCC-CCcccccccCCccccCcccc-cCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh---HHHHHHH
Q 047157          646 LNKD-QTRTDTNMRGTMGYVAPEWL-RNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL---SDWVISC  720 (788)
Q Consensus       646 ~~~~-~~~~~~~~~gt~~y~aPE~~-~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~~~  720 (788)
                      .... .....+..+.|..|.|||++ ....|+.+.||||.|||+.||++|+..|.+.+...+.......+   .+.....
T Consensus       175 ~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~  254 (359)
T KOG0660|consen  175 LDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQK  254 (359)
T ss_pred             ccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHH
Confidence            7543 12233567789999999987 45689999999999999999999999998875543322211110   0111112


Q ss_pred             hhcccccccccCCCCCcc------cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEVLS------DLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~------~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      +.+......+...+....      -.......++|+.+||..||.+|+|++|++++
T Consensus       255 i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h  310 (359)
T KOG0660|consen  255 IRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH  310 (359)
T ss_pred             hccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            222222222222221111      11234567899999999999999999999874

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=4.6e-36  Score=320.01  Aligned_cols=260  Identities=28%  Similarity=0.394  Sum_probs=202.4

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccc-hHHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      +.+.++||+|+||.||+|..........+++|.++.. .....+.+.+|++++.++ +||||+++++++.+.+..++|+|
T Consensus         4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e   83 (297)
T cd05089           4 IKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIE   83 (297)
T ss_pred             ceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEE
Confidence            5667899999999999998874444446788887642 234456789999999999 79999999999999999999999


Q ss_pred             cCCCCCHhHhhhccC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCC
Q 047157          568 LMPNGTLSNFLFHEG---------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTN  632 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~  632 (788)
                      |+++++|.+++....               ..+++..+..++.||+.||+|||++   +|+||||||+|||++     .+
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~-----~~  155 (297)
T cd05089          84 YAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVG-----EN  155 (297)
T ss_pred             ecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEEC-----CC
Confidence            999999999996532               2478899999999999999999998   999999999999998     77


Q ss_pred             CcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchh
Q 047157          633 YMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDI  711 (788)
Q Consensus       633 ~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~  711 (788)
                      ..+||+|||++.......  .......+..|+|||.+....++.++||||||+++|||++ |..||......+.      
T Consensus       156 ~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~------  227 (297)
T cd05089         156 LASKIADFGLSRGEEVYV--KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAEL------  227 (297)
T ss_pred             CeEEECCcCCCcccccee--ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH------
Confidence            899999999986432111  1111223457999999998899999999999999999997 9999965422110      


Q ss_pred             hhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCCCCC
Q 047157          712 VLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMP  780 (788)
Q Consensus       712 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~~~p  780 (788)
                            ......+.         ...........+.+++.+||+.+|.+||+++++++.|+.+.+...+
T Consensus       228 ------~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~  281 (297)
T cd05089         228 ------YEKLPQGY---------RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA  281 (297)
T ss_pred             ------HHHHhcCC---------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence                  01111110         0001112345678899999999999999999999999887765443

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=4.1e-36  Score=325.48  Aligned_cols=203  Identities=25%  Similarity=0.423  Sum_probs=174.8

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      +....|.+.+.||+|+||.||++...  .++..+++|.+.... ....+.+.+|++++++++||||+++++++.+++..+
T Consensus         2 l~~~~y~~~~~lg~g~~g~V~~~~~~--~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   79 (333)
T cd06650           2 LKDDDFEKISELGAGNGGVVFKVSHK--PSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS   79 (333)
T ss_pred             cchhhhheeccccCCCCEEEEEEEEC--CCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEE
Confidence            34566778899999999999999886  567789999876542 344567899999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +||||+++++|.+++... ..+++..+..++.|++.||.|||+.  .+|+|+||||+|||++     .++.+||+|||++
T Consensus        80 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~-----~~~~~kL~Dfg~~  151 (333)
T cd06650          80 ICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVN-----SRGEIKLCDFGVS  151 (333)
T ss_pred             EEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEc-----CCCCEEEeeCCcc
Confidence            999999999999999654 4578889999999999999999974  2699999999999998     7788999999998


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCcc
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELS  700 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~  700 (788)
                      .......   .....++..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus       152 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~  205 (333)
T cd06650         152 GQLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP  205 (333)
T ss_pred             hhhhhhc---cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence            7653221   12346889999999999989999999999999999999999999754

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.7e-36  Score=312.69  Aligned_cols=251  Identities=26%  Similarity=0.446  Sum_probs=200.0

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .+.+.+.||+|+||.||++..+   .+..+++|.+.... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~---~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWR---GKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY   80 (256)
T ss_pred             HcchhhhhccCCCceEEEeEec---CCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence            3557789999999999999874   34579999886432 2345688899999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++++|.+++......+++..+..++.||+.||+|||+.   +|+||||||+||+++     .++.+||+|||++.....
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~-----~~~~~kl~dfg~~~~~~~  152 (256)
T cd05059          81 MANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVG-----EDNVVKVSDFGLARYVLD  152 (256)
T ss_pred             CCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEEC-----CCCcEEECCcccceeccc
Confidence            999999999977666789999999999999999999999   999999999999998     788999999999876543


Q ss_pred             CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      ..........++..|+|||.+.+..++.++||||||+++|||++ |+.||......+..            ...... . 
T Consensus       153 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~------------~~~~~~-~-  218 (256)
T cd05059         153 DQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVV------------ESVSAG-Y-  218 (256)
T ss_pred             ccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHH------------HHHHcC-C-
Confidence            22222222234467999999998899999999999999999999 78888654221110            001100 0 


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                             ...........+.+++.+||+.+|++|||+.|+++.|.
T Consensus       219 -------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~  256 (256)
T cd05059         219 -------RLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT  256 (256)
T ss_pred             -------cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence                   00011123567889999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=7e-36  Score=338.60  Aligned_cols=250  Identities=20%  Similarity=0.268  Sum_probs=200.9

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      |.+.+.||+|++|.||+|..... .+..|++|.+..........+.+|+.+++.++||||+++++++..++..+|||||+
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~-~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~  147 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSD-PKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG  147 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCC-CCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence            66789999999999999986522 25578888776555555667889999999999999999999999999999999999


Q ss_pred             CCCCHhHhhhcc---CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          570 PNGTLSNFLFHE---GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       570 ~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ++|+|.+++...   ...+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++...
T Consensus       148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-----~~~~~kL~DFgla~~~  219 (478)
T PTZ00267        148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLM-----PTGIIKLGDFGFSKQY  219 (478)
T ss_pred             CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEEC-----CCCcEEEEeCcCceec
Confidence            999999988542   34578899999999999999999999   999999999999998     7889999999999876


Q ss_pred             CCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          647 NKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       647 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+            .......+.
T Consensus       220 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~------------~~~~~~~~~  287 (478)
T PTZ00267        220 SDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE------------IMQQVLYGK  287 (478)
T ss_pred             CCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH------------HHHHHHhCC
Confidence            44322 12334568999999999999999999999999999999999999996542211            001111111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ....         .......+.+++.+||+.||++||++++++.
T Consensus       288 ~~~~---------~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        288 YDPF---------PCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             CCCC---------CccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence            1100         1122356788999999999999999999864

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.5e-36  Score=321.41  Aligned_cols=250  Identities=21%  Similarity=0.289  Sum_probs=208.5

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeeccc--chHHHHHHHHHHHHHhcCCCccccceEeeEEecCCe-EEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDK-RLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~-~~lV  565 (788)
                      .|...+++|+|+||.++..+++  .....+++|.+.-  .....++...+|+.++++++|||||.+.+.+.+++. .+||
T Consensus         5 ~Ye~~~~iG~GafG~a~lvrhk--~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv   82 (426)
T KOG0589|consen    5 NYEVLRQVGRGAFGSALLVRHK--SDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV   82 (426)
T ss_pred             hhhhhhhcCccccchhhhhhhc--cCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence            4666789999999999999887  4455788887753  334555678899999999999999999999998887 9999


Q ss_pred             EecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          566 YELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |+|++||+|.+.+...+ ..++++.+..++.||+.|+.|||++   .|+|||||+.||+++     .+..|||+|||+|+
T Consensus        83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Niflt-----k~~~VkLgDfGlaK  154 (426)
T KOG0589|consen   83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLT-----KDKKVKLGDFGLAK  154 (426)
T ss_pred             EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhcc-----ccCceeecchhhhh
Confidence            99999999999997654 6789999999999999999999998   999999999999998     77889999999999


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .+..+... .....||+.|+.||++.+.+|..|+|||||||++|||++-+++|...+......            .....
T Consensus       155 ~l~~~~~~-a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~------------ki~~~  221 (426)
T KOG0589|consen  155 ILNPEDSL-ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELIL------------KINRG  221 (426)
T ss_pred             hcCCchhh-hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHH------------HHhhc
Confidence            98766522 345789999999999999999999999999999999999999998764332211            11111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                          ..     ...+..+..++..++..|++.+|..||++.+++.+
T Consensus       222 ----~~-----~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  222 ----LY-----SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             ----cC-----CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence                11     11223456677888999999999999999999875

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=1.7e-36  Score=328.44  Aligned_cols=252  Identities=22%  Similarity=0.228  Sum_probs=202.2

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      |.+.+.||+|+||+||++...  .++..||+|.++...   ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus         3 y~~~~~lg~G~~g~Vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           3 FDVKSLVGRGHFGEVQVVREK--ATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             ceEEEEEEeccCEEEEEEEEC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            567789999999999999876  667799999987543   234567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++......+++..+..++.||+.||.|||+.   +|+||||||+|||++     .++.+||+|||++..+
T Consensus        81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~-----~~~~~kL~Dfg~a~~~  152 (330)
T cd05601          81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLID-----RTGHIKLADFGSAARL  152 (330)
T ss_pred             CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEEC-----CCCCEEeccCCCCeEC
Confidence            99999999999977667789999999999999999999999   999999999999998     7889999999999876


Q ss_pred             CCCCCcccccccCCccccCccccc------CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLR------NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~------~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      ............||+.|+|||++.      ...++.++||||||+++|||++|+.||........           . ..
T Consensus       153 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~-----------~-~~  220 (330)
T cd05601         153 TANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT-----------Y-NN  220 (330)
T ss_pred             CCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH-----------H-HH
Confidence            544433333456899999999986      45678999999999999999999999975422111           0 00


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ....  ...+    ...........+.+++..|++ +|++|||+++++++
T Consensus       221 i~~~--~~~~----~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h  263 (330)
T cd05601         221 IMNF--QRFL----KFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH  263 (330)
T ss_pred             HHcC--CCcc----CCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence            1100  0000    111111234567788889997 99999999999863

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-36  Score=325.46  Aligned_cols=260  Identities=30%  Similarity=0.389  Sum_probs=211.7

Q ss_pred             cccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCCCH
Q 047157          495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTL  574 (788)
Q Consensus       495 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~gsL  574 (788)
                      +||+|.||+||.|++.  .+++.+|||.+........+.+..|+.+.+.|+|.|||+++|.+.+++..-|.||.++||+|
T Consensus       582 VLGKGTYG~VYA~RD~--~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL  659 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDM--DTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL  659 (1226)
T ss_pred             EeecCceeEEEeeccc--cceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence            6999999999999887  88999999999877666777889999999999999999999999999999999999999999


Q ss_pred             hHhhhccCCCC--CHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCc
Q 047157          575 SNFLFHEGQRP--GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR  652 (788)
Q Consensus       575 ~~~l~~~~~~~--~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~  652 (788)
                      .++|+.+-.++  ++.++-.+.+||++||.|||++   .|||||||-+|||++    .-.+.+||+|||-++.+..-. .
T Consensus       660 SsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvN----TySGvlKISDFGTsKRLAgin-P  731 (1226)
T KOG4279|consen  660 SSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVN----TYSGVLKISDFGTSKRLAGIN-P  731 (1226)
T ss_pred             HHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEe----eccceEEecccccchhhccCC-c
Confidence            99998875555  7888888999999999999999   999999999999997    267899999999998775433 3


Q ss_pred             ccccccCCccccCcccccCC--CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccc
Q 047157          653 TDTNMRGTMGYVAPEWLRNV--PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLV  730 (788)
Q Consensus       653 ~~~~~~gt~~y~aPE~~~~~--~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  730 (788)
                      ....+.||..|||||++..+  .|.+++|||||||++.||.||++||--.....           .+..  .    ..+.
T Consensus       732 ~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq-----------AAMF--k----VGmy  794 (1226)
T KOG4279|consen  732 CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ-----------AAMF--K----VGMY  794 (1226)
T ss_pred             cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh-----------Hhhh--h----hcce
Confidence            44568899999999999765  48899999999999999999999995321110           0000  0    0111


Q ss_pred             cCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH--HhhcCcCCCCCCCC
Q 047157          731 SHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH--MLEGTLEVGMPPLL  783 (788)
Q Consensus       731 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~--~L~~~~~~~~pp~p  783 (788)
                      +..|  ..+.+...+...++++|+.+||.+||+++++++  .|+--...+.||++
T Consensus       795 KvHP--~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~kk~r~~ls  847 (1226)
T KOG4279|consen  795 KVHP--PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNNKKPRPKLS  847 (1226)
T ss_pred             ecCC--CCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCCCCCCCCCC
Confidence            1222  234455677888999999999999999999985  45444344555554

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=9.9e-36  Score=314.48  Aligned_cols=258  Identities=25%  Similarity=0.405  Sum_probs=200.7

Q ss_pred             hhcccccccccccceEEEEEEeccCc--ceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDT--QIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .+.+.+.||+|+||+||+|.....+.  ...+++|.+.... .....++..|+..+++++||||+++++++.. ...+++
T Consensus         8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i   86 (279)
T cd05111           8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLV   86 (279)
T ss_pred             hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEE
Confidence            44566899999999999998753222  2358888876433 2344678889999999999999999998754 557889


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      +||+++|+|.+++......+++..+..++.||+.||.|||++   +++|+||||+|||++     .++.+||+|||+++.
T Consensus        87 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~-----~~~~~kl~Dfg~~~~  158 (279)
T cd05111          87 TQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLK-----SDSIVQIADFGVADL  158 (279)
T ss_pred             EEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEc-----CCCcEEEcCCcccee
Confidence            999999999999987777889999999999999999999998   999999999999998     788999999999986


Q ss_pred             cCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          646 LNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       646 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ...... .......++..|+|||.+.+..++.++||||||+++|||++ |+.||.......        ..+.    ...
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--------~~~~----~~~  226 (279)
T cd05111         159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE--------VPDL----LEK  226 (279)
T ss_pred             ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--------HHHH----HHC
Confidence            543222 12223456778999999998899999999999999999998 999986542211        1111    111


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      +....    .+.     .....+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus       227 ~~~~~----~~~-----~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~  270 (279)
T cd05111         227 GERLA----QPQ-----ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR  270 (279)
T ss_pred             CCcCC----CCC-----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence            11000    011     123456778899999999999999999999988654

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=5.4e-36  Score=324.83  Aligned_cols=261  Identities=29%  Similarity=0.435  Sum_probs=202.6

Q ss_pred             HhhcccccccccccceEEEEEEec---cCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEec-CCe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSE-EDK  561 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~-~~~  561 (788)
                      ..+.+.++||+|+||.||+|....   ..++..||+|+++... ....+.+.+|++++.++ +|+||++++++|.. +..
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~   86 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP   86 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence            457778999999999999997542   1234689999986432 33446788999999999 89999999998865 457


Q ss_pred             EEEEEecCCCCCHhHhhhccC-----------------------------------------------------------
Q 047157          562 RLLVYELMPNGTLSNFLFHEG-----------------------------------------------------------  582 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~-----------------------------------------------------------  582 (788)
                      .++++||+++++|.+++....                                                           
T Consensus        87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (337)
T cd05054          87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY  166 (337)
T ss_pred             EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence            889999999999999985421                                                           


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCc-ccccccCC
Q 047157          583 -QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGT  660 (788)
Q Consensus       583 -~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt  660 (788)
                       ..+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||++..+...... ......++
T Consensus       167 ~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~-----~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~  238 (337)
T cd05054         167 KEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLS-----ENNVVKICDFGLARDIYKDPDYVRKGDARLP  238 (337)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEe-----CCCcEEEeccccchhcccCcchhhccCCCCC
Confidence             2568899999999999999999999   999999999999998     7789999999999876433221 12234556


Q ss_pred             ccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCccc
Q 047157          661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSD  739 (788)
Q Consensus       661 ~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  739 (788)
                      ..|+|||++.+..++.++|||||||++|||++ |+.||......+.       +.    ....... ..        ..+
T Consensus       239 ~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~-------~~----~~~~~~~-~~--------~~~  298 (337)
T cd05054         239 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE-------FC----RRLKEGT-RM--------RAP  298 (337)
T ss_pred             ccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH-------HH----HHHhccC-CC--------CCC
Confidence            78999999999999999999999999999998 9999865321110       00    1111110 00        011


Q ss_pred             HHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          740 LERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       740 ~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ......+.+++.+||+.+|++||++.||+++|+.+++
T Consensus       299 ~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         299 EYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            1234578899999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=4.9e-36  Score=317.64  Aligned_cols=269  Identities=24%  Similarity=0.358  Sum_probs=203.8

Q ss_pred             hhcccccccccccceEEEEEEe--ccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEec--CCeEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILR--LKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE--EDKRLL  564 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~--~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~l  564 (788)
                      .+.+.+.||+|+||.||++...  ....+..|++|.+........+.+.+|++++++++||||+++++++..  ....++
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   84 (284)
T cd05081           5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL   84 (284)
T ss_pred             cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence            4567789999999999999753  234567899999877666667789999999999999999999998754  346899


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |+||+++++|.+++......+++..+..++.|++.||+|||++   +|+||||||+||+++     .++.+||+|||++.
T Consensus        85 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~-----~~~~~~l~dfg~~~  156 (284)
T cd05081          85 VMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVE-----SENRVKIGDFGLTK  156 (284)
T ss_pred             EEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEEC-----CCCeEEECCCcccc
Confidence            9999999999999976666789999999999999999999999   999999999999998     77899999999998


Q ss_pred             ccCCCCCcc--cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCcccccccc--ccc-h-hhhHHHHH
Q 047157          645 LLNKDQTRT--DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEES--EEV-D-IVLSDWVI  718 (788)
Q Consensus       645 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~--~~~-~-~~~~~~~~  718 (788)
                      .........  .....++..|+|||.+.+..++.++||||||+++|||++|..++.........  ... . ........
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd05081         157 VLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLI  236 (284)
T ss_pred             cccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHH
Confidence            764432211  11122345699999999889999999999999999999988765432211000  000 0 00000000


Q ss_pred             HHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          719 SCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       719 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      .....         .............+.+++.+||+.+|++|||+.||++.|+.+
T Consensus       237 ~~~~~---------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         237 ELLKN---------NGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             HHHhc---------CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            11111         111111122345688999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=1.4e-35  Score=309.26  Aligned_cols=250  Identities=26%  Similarity=0.411  Sum_probs=198.9

Q ss_pred             cccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCCC
Q 047157          495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGT  573 (788)
Q Consensus       495 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~gs  573 (788)
                      .||+|+||.||+|.+.....+..||+|.+.... ....+.+.+|+.++++++||||+++++++. .+..++||||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            489999999999988755666789999886553 334567999999999999999999999885 457899999999999


Q ss_pred             HhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCcc
Q 047157          574 LSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT  653 (788)
Q Consensus       574 L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~  653 (788)
                      |.+++......+++..++.++.||+.||.|||++   +++||||||+||+++     .+..+||+|||++..........
T Consensus        81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~-----~~~~~kl~dfg~~~~~~~~~~~~  152 (257)
T cd05115          81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLV-----NQHYAKISDFGLSKALGADDSYY  152 (257)
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEc-----CCCcEEeccCCccccccCCccce
Confidence            9999976667789999999999999999999998   999999999999998     77899999999998654332221


Q ss_pred             --cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcccccccc
Q 047157          654 --DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLV  730 (788)
Q Consensus       654 --~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  730 (788)
                        .....++..|+|||.+....++.++||||||+++||+++ |+.||......+.            ......+..    
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~------------~~~~~~~~~----  216 (257)
T cd05115         153 KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEV------------MSFIEQGKR----  216 (257)
T ss_pred             eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHH------------HHHHHCCCC----
Confidence              111223568999999988889999999999999999996 9999965422110            011111110    


Q ss_pred             cCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          731 SHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       731 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                           ...+....+.+.+++..||+.||++||++.+|.+.|+..
T Consensus       217 -----~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         217 -----LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             -----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence                 001112346777899999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=1.1e-35  Score=312.16  Aligned_cols=258  Identities=27%  Similarity=0.487  Sum_probs=204.8

Q ss_pred             HhhcccccccccccceEEEEEEeccC-cceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ..+...+.||+|+||.||+|...... ....+++|.+.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII   84 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence            34566789999999999999986322 23479999886542 44466889999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++......+++.++..++.|++.||.|||+.   +++|+||||+||+++     .++.+||+|||++..
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~-----~~~~~kl~dfg~~~~  156 (268)
T cd05063          85 TEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVN-----SNLECKVSDFGLSRV  156 (268)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEc-----CCCcEEECCCcccee
Confidence            999999999999977667789999999999999999999999   999999999999998     788999999999986


Q ss_pred             cCCCCCcccc--cccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          646 LNKDQTRTDT--NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       646 ~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ..........  ....+..|+|||.+....++.++||||||+++|||++ |+.||......+        .    .....
T Consensus       157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~--------~----~~~i~  224 (268)
T cd05063         157 LEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE--------V----MKAIN  224 (268)
T ss_pred             cccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH--------H----HHHHh
Confidence            6433222111  1223457999999988889999999999999999997 999986432111        0    01111


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      ...         ...........+.+++.+||+.+|++||++.+|++.|+++
T Consensus       225 ~~~---------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         225 DGF---------RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             cCC---------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            110         0001112345678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=1.2e-35  Score=313.62  Aligned_cols=260  Identities=27%  Similarity=0.412  Sum_probs=202.2

Q ss_pred             HhhcccccccccccceEEEEEEeccC---cceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKD---TQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~---~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      ..+.+.+.||+|++|.||+|.+....   ....|++|.+.... ......+.+|+.++++++|+||+++++++.+.+..+
T Consensus         6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   85 (277)
T cd05036           6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRF   85 (277)
T ss_pred             HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcE
Confidence            44566789999999999999987321   56789999886443 334567899999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccC------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          564 LVYELMPNGTLSNFLFHEG------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                      +||||+++++|.+++....      ..+++..++.++.||+.||.|||++   +++|+||||+||+++...  ....+||
T Consensus        86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~--~~~~~kl  160 (277)
T cd05036          86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKG--PGRVAKI  160 (277)
T ss_pred             EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccC--CCcceEe
Confidence            9999999999999986543      2578999999999999999999999   999999999999998432  3457999


Q ss_pred             eecCCccccCCCCCcc-cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHH
Q 047157          638 SDFGISKLLNKDQTRT-DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSD  715 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~  715 (788)
                      +|||+++......... ......+..|+|||++.+..++.++|||||||++|||++ |+.||......+.        ..
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~--------~~  232 (277)
T cd05036         161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV--------ME  232 (277)
T ss_pred             ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH--------HH
Confidence            9999998763322111 112233567999999998899999999999999999997 9999875432111        11


Q ss_pred             HHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          716 WVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       716 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                      .    .....       ..  .........+.+++.+||+.+|++||++.+|++.|+.
T Consensus       233 ~----~~~~~-------~~--~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~  277 (277)
T cd05036         233 F----VTGGG-------RL--DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY  277 (277)
T ss_pred             H----HHcCC-------cC--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence            0    10000       00  0111224578889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=1.4e-35  Score=309.24  Aligned_cols=248  Identities=29%  Similarity=0.434  Sum_probs=197.6

Q ss_pred             cccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCC
Q 047157          495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       495 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      +||+|+||.||+|.++...++..+|+|.++...  ....+++.+|+.++++++||||+++++++. .+..++||||++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            689999999999987655677899999886432  345678999999999999999999999885 45678999999999


Q ss_pred             CHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCc
Q 047157          573 TLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR  652 (788)
Q Consensus       573 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~  652 (788)
                      +|.+++... ..+++..+..++.|++.||.|||++   +|+||||||+||+++     .++.+||+|||++.........
T Consensus        81 ~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~-----~~~~~kl~Dfg~~~~~~~~~~~  151 (257)
T cd05116          81 PLNKFLQKN-KHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLV-----TQHYAKISDFGLSKALGADENY  151 (257)
T ss_pred             cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEc-----CCCeEEECCCccccccCCCCCe
Confidence            999999644 4688999999999999999999998   999999999999998     7788999999999876543322


Q ss_pred             c--cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          653 T--DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       653 ~--~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      .  .....++..|+|||.+....++.++||||||+++|||++ |+.||......+        ..    .........  
T Consensus       152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--------~~----~~i~~~~~~--  217 (257)
T cd05116         152 YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE--------VT----QMIESGERM--  217 (257)
T ss_pred             eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--------HH----HHHHCCCCC--
Confidence            1  112234578999999988889999999999999999998 999997542211        11    111111100  


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                           .  ........+.+++.+||+.||++||++.+|.+.|++
T Consensus       218 -----~--~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         218 -----E--CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             -----C--CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence                 0  011234567889999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=1e-35  Score=315.03  Aligned_cols=257  Identities=26%  Similarity=0.400  Sum_probs=201.7

Q ss_pred             HhhcccccccccccceEEEEEEec--cCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRL--KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~--~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ..+.+.+.||+|+||.||+|....  ...+..+++|.+.... ......+.+|++++++++||||+++++++..++..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            456677899999999999998642  2355789999987433 3445688999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhcc----------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCC
Q 047157          565 VYELMPNGTLSNFLFHE----------------GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKT  628 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~----------------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  628 (788)
                      ||||+++++|.+++...                ...+++.+...++.|++.||.|||++   +|+|+||||+||+++   
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~---  158 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIG---  158 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEc---
Confidence            99999999999998532                12467888999999999999999999   999999999999998   


Q ss_pred             CCCCCcEEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCcccccccc
Q 047157          629 LDTNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEES  706 (788)
Q Consensus       629 ~~~~~~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~  706 (788)
                        .+..+||+|||++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||........ 
T Consensus       159 --~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~-  235 (283)
T cd05090         159 --EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV-  235 (283)
T ss_pred             --CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-
Confidence              778899999999986543221 11223345678999999988889999999999999999998 8889865321110 


Q ss_pred             ccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          707 EEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       707 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                                 ...........         .......++.+++.+||+.||++||++.+|+++|..
T Consensus       236 -----------~~~~~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         236 -----------IEMVRKRQLLP---------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             -----------HHHHHcCCcCC---------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence                       11111111100         111224567889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=5.9e-36  Score=320.06  Aligned_cols=258  Identities=29%  Similarity=0.433  Sum_probs=201.3

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccc-hHHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ..+.+.+.||+|+||.||+|.+...+....+++|.+... .....+.+.+|++++.++ +||||+++++++.+++..++|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            456678999999999999999864444456788877643 244556888999999999 899999999999999999999


Q ss_pred             EecCCCCCHhHhhhccC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCC
Q 047157          566 YELMPNGTLSNFLFHEG---------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD  630 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~  630 (788)
                      +||+++++|.+++....               ..+++.+++.++.||+.||+|||++   +|+||||||+|||++     
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~-----  158 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG-----  158 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEec-----
Confidence            99999999999996432               2568899999999999999999998   999999999999998     


Q ss_pred             CCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccc
Q 047157          631 TNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEV  709 (788)
Q Consensus       631 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~  709 (788)
                      .++.+||+|||++......  ........+..|+|||.+.+..++.++||||||+++|||++ |..||......+.    
T Consensus       159 ~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~----  232 (303)
T cd05088         159 ENYVAKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL----  232 (303)
T ss_pred             CCCcEEeCccccCcccchh--hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHH----
Confidence            7789999999998643211  11111234567999999988889999999999999999998 9999864422110    


Q ss_pred             hhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          710 DIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       710 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                          ..    ......       .+.  ........+.+++.+||+.+|++||++++++++|+.+.+
T Consensus       233 ----~~----~~~~~~-------~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~  282 (303)
T cd05088         233 ----YE----KLPQGY-------RLE--KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  282 (303)
T ss_pred             ----HH----HHhcCC-------cCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence                00    010000       000  011123567889999999999999999999999877543

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=3.7e-36  Score=324.97  Aligned_cols=243  Identities=26%  Similarity=0.301  Sum_probs=195.3

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMP  570 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~  570 (788)
                      +.||+|+||.||++...  .++..||+|.+....   ......+.+|++++..++||||+++++++...+..++||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~--~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~   78 (325)
T cd05594           1 KLLGKGTFGKVILVKEK--ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN   78 (325)
T ss_pred             CeeeeCCCEEEEEEEEC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCC
Confidence            46899999999999876  667799999987542   2334567889999999999999999999999999999999999


Q ss_pred             CCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhh-ccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          571 NGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE-ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       571 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      +++|..++... ..+++..+..++.||+.||.|||+ .   +|+||||||+|||++     .++.+||+|||++......
T Consensus        79 ~~~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~-----~~~~~kL~Dfg~~~~~~~~  149 (325)
T cd05594          79 GGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLD-----KDGHIKITDFGLCKEGIKD  149 (325)
T ss_pred             CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEEC-----CCCCEEEecCCCCeecCCC
Confidence            99999888544 568899999999999999999997 6   999999999999998     7889999999998754322


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      .. ......|++.|+|||++.+..++.++||||||+++|||++|+.||.........            ........   
T Consensus       150 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~------------~~i~~~~~---  213 (325)
T cd05594         150 GA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF------------ELILMEEI---  213 (325)
T ss_pred             Cc-ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHH------------HHHhcCCC---
Confidence            21 122356899999999999999999999999999999999999999754321110            00100100   


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIHM  770 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~  770 (788)
                           ..  +......+.+++.+||+.||++|+     ++++++++
T Consensus       214 -----~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         214 -----RF--PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             -----CC--CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence                 00  111235677899999999999996     89999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=1e-35  Score=313.98  Aligned_cols=259  Identities=24%  Similarity=0.411  Sum_probs=201.8

Q ss_pred             HHHhhcccccccccccceEEEEEEec---cCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCe
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDK  561 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  561 (788)
                      ....+.+.+.||+|+||.||+|....   ...+..||+|.+.... .....++.+|+.+++.++||||+++++++.+...
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            34567778999999999999998642   2345679999885432 3345678999999999999999999999999999


Q ss_pred             EEEEEecCCCCCHhHhhhccC---------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCC
Q 047157          562 RLLVYELMPNGTLSNFLFHEG---------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTN  632 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~  632 (788)
                      .++||||+++++|.+++.+..         ..+++..+..++.|++.||.|||+.   +++|+||||+||+++     ++
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~-----~~  155 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA-----ED  155 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEc-----CC
Confidence            999999999999999986532         2357788899999999999999998   999999999999998     78


Q ss_pred             CcEEEeecCCccccCCCCCcc-cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccch
Q 047157          633 YMAKISDFGISKLLNKDQTRT-DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVD  710 (788)
Q Consensus       633 ~~~kL~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~  710 (788)
                      +.+||+|||++.......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||......+      
T Consensus       156 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~------  229 (277)
T cd05062         156 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ------  229 (277)
T ss_pred             CCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH------
Confidence            899999999987654322211 112345678999999998899999999999999999999 688886542211      


Q ss_pred             hhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          711 IVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       711 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                        ..    ...........         .......+.+++.+||+.||++|||+.|++++|++
T Consensus       230 --~~----~~~~~~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         230 --VL----RFVMEGGLLDK---------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             --HH----HHHHcCCcCCC---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence              00    11111111111         11223567889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.7e-36  Score=329.70  Aligned_cols=252  Identities=25%  Similarity=0.309  Sum_probs=203.0

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||+||+|...  .++..||+|++....   ......+.+|++++..++||||+++++++.+++..++|
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   79 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDK--DTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLV   79 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEEC--CCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEE
Confidence            3567789999999999999886  567799999987543   23456788999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++.+. ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++..
T Consensus        80 ~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~-----~~~~~kL~Dfg~~~~  150 (350)
T cd05573          80 MEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILID-----ADGHIKLADFGLCKK  150 (350)
T ss_pred             EcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEEC-----CCCCEEeecCCCCcc
Confidence            9999999999999765 6788999999999999999999998   999999999999998     788999999999987


Q ss_pred             cCCCC----------------------------CcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCC
Q 047157          646 LNKDQ----------------------------TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHI  697 (788)
Q Consensus       646 ~~~~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~  697 (788)
                      .....                            ........||+.|+|||.+.+..++.++|||||||++|||++|+.||
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf  230 (350)
T cd05573         151 MNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPF  230 (350)
T ss_pred             CcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCC
Confidence            64433                            11223356899999999999999999999999999999999999999


Q ss_pred             CccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC-HHHHHHH
Q 047157          698 ELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS-MKKVIHM  770 (788)
Q Consensus       698 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-~~evl~~  770 (788)
                      ......+..            ......  .    ............+.+.+++..|++ ||.+||+ ++|++++
T Consensus       231 ~~~~~~~~~------------~~i~~~--~----~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         231 YSDTLQETY------------NKIINW--K----ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             CCCCHHHHH------------HHHhcc--C----CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            765321110            001000  0    000011111135667888999997 9999999 9999975

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=1.5e-35  Score=310.88  Aligned_cols=259  Identities=26%  Similarity=0.473  Sum_probs=206.1

Q ss_pred             HHhhcccccccccccceEEEEEEeccC-cceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ...+.+.+.||+|+||.||+|.....+ ....+++|.++... ....+.+.+|+.++++++||||+++++++.+++..++
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   82 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI   82 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            345677899999999999999875332 34579999886532 3446789999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++++|.+++......+++.++..++.|++.||.|||+.   +++|+||||+|||++     .++.++|+|||++.
T Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~-----~~~~~~l~dfg~~~  154 (267)
T cd05066          83 VTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVN-----SNLVCKVSDFGLSR  154 (267)
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEEC-----CCCeEEeCCCCccc
Confidence            9999999999999987766789999999999999999999999   999999999999998     78899999999998


Q ss_pred             ccCCCCCccc--ccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHh
Q 047157          645 LLNKDQTRTD--TNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       645 ~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      ..........  ....++..|+|||.+.+..++.++||||||+++||+++ |+.||......+.        ..    ..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~--------~~----~~  222 (267)
T cd05066         155 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDV--------IK----AI  222 (267)
T ss_pred             ccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHH--------HH----HH
Confidence            7654332211  11223567999999998899999999999999999886 9999865422110        00    01


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      ... .        ........+..+.+++.+|++.+|.+||++.++++.|+++
T Consensus       223 ~~~-~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         223 EEG-Y--------RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             hCC-C--------cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            111 0        0001112345678899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=1.7e-35  Score=310.88  Aligned_cols=258  Identities=27%  Similarity=0.493  Sum_probs=204.6

Q ss_pred             HhhcccccccccccceEEEEEEeccC-cceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ..+.+.+.||+|+||.||+|...... ....|+||.+... .....++|..|+.++++++||||+++++++.++...++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            45678899999999999999986432 2347999998754 344567899999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++......+++.++..++.|++.||.|||++   +++|+||||+||+++     .+..+||+|||++..
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~-----~~~~~kl~dfg~~~~  155 (269)
T cd05065          84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVN-----SNLVCKVSDFGLSRF  155 (269)
T ss_pred             EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEc-----CCCcEEECCCccccc
Confidence            999999999999977667789999999999999999999998   999999999999998     778999999999876


Q ss_pred             cCCCCCcc-ccc-c--cCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHH
Q 047157          646 LNKDQTRT-DTN-M--RGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       646 ~~~~~~~~-~~~-~--~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      ........ ... .  ..+..|+|||.+.+..++.++||||||+++||+++ |..||......+        .....   
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~--------~~~~i---  224 (269)
T cd05065         156 LEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD--------VINAI---  224 (269)
T ss_pred             cccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH--------HHHHH---
Confidence            54322211 111 1  12457999999999999999999999999999886 999986542211        11111   


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                       ... .        ......+.+..+.+++.+||+.+|++||++++|+++|+++
T Consensus       225 -~~~-~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         225 -EQD-Y--------RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             -HcC-C--------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence             000 0        0001112345678899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=6.3e-36  Score=328.41  Aligned_cols=255  Identities=21%  Similarity=0.230  Sum_probs=201.7

Q ss_pred             HHHhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      ....|.+.+.||+|+||.||++...  .++..+|+|.+.+..   ....+.+.+|+.+++.++||||+++++++.+++..
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~  118 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHK--SSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL  118 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEEC--CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            3456777899999999999999886  667799999986532   23345678899999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||+++|+|.+++...  .++...+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+
T Consensus       119 ~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~-----~~~~~kL~DfG~  188 (370)
T cd05596         119 YMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLD-----KSGHLKLADFGT  188 (370)
T ss_pred             EEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEc-----CCCCEEEEeccc
Confidence            9999999999999998543  577888889999999999999999   999999999999998     788999999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCC----CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHH
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNV----PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVI  718 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  718 (788)
                      +...............||+.|+|||.+.+.    .++.++|||||||++|||++|+.||........            .
T Consensus       189 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~------------~  256 (370)
T cd05596         189 CMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT------------Y  256 (370)
T ss_pred             eeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHH------------H
Confidence            987654333233345789999999998653    478899999999999999999999976432110            0


Q ss_pred             HHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCC--CCCHHHHHHH
Q 047157          719 SCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNL--RPSMKKVIHM  770 (788)
Q Consensus       719 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~  770 (788)
                      ........      .............+.+++..||+.+|++  ||+++|++++
T Consensus       257 ~~i~~~~~------~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         257 SKIMDHKN------SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             HHHHcCCC------cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence            11111000      0111111223567788999999999988  9999999865

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=1e-35  Score=328.55  Aligned_cols=252  Identities=21%  Similarity=0.254  Sum_probs=194.8

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      +.+.+.||+|+||+||+|...  .++..+|+|++....   ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus         3 f~~~~~LG~G~~g~Vy~~~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~   80 (381)
T cd05626           3 FVKIKTLGIGAFGEVCLACKV--DTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (381)
T ss_pred             ceEEEEEeecCCEEEEEEEEC--CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence            456789999999999999886  677799999996532   334567899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++|+|.+++... ..+++..+..++.||+.||.|||+.   +|+||||||+|||++     .++.+||+|||++..+
T Consensus        81 E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~-----~~~~~kL~DFGl~~~~  151 (381)
T cd05626          81 DYIPGGDMMSLLIRM-EVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILID-----LDGHIKLTDFGLCTGF  151 (381)
T ss_pred             ecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEEC-----CCCCEEEeeCcCCccc
Confidence            999999999998654 4578888889999999999999998   999999999999998     7789999999997643


Q ss_pred             CCCCC----------------------------------------------cccccccCCccccCcccccCCCCCccCcc
Q 047157          647 NKDQT----------------------------------------------RTDTNMRGTMGYVAPEWLRNVPVTTKVDV  680 (788)
Q Consensus       647 ~~~~~----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~k~DV  680 (788)
                      .....                                              .......||+.|+|||.+.+..++.++||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Di  231 (381)
T cd05626         152 RWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDW  231 (381)
T ss_pred             ccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccce
Confidence            21000                                              00123468999999999998899999999


Q ss_pred             hhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhH--ccCCCC
Q 047157          681 FSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLW--CNHPDP  758 (788)
Q Consensus       681 wSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~--cl~~dP  758 (788)
                      |||||++|||++|+.||......+...           . ....  ..    ............++.+++.+  |+..+|
T Consensus       232 wSlG~il~elltG~~Pf~~~~~~~~~~-----------~-i~~~--~~----~~~~~~~~~~s~~~~dli~~ll~~~~~~  293 (381)
T cd05626         232 WSVGVILFEMLVGQPPFLAPTPTETQL-----------K-VINW--EN----TLHIPPQVKLSPEAVDLITKLCCSAEER  293 (381)
T ss_pred             eehhhHHHHHHhCCCCCcCCCHHHHHH-----------H-HHcc--cc----ccCCCCCCCCCHHHHHHHHHHccCcccc
Confidence            999999999999999997643211100           0 0000  00    00111111123455566655  566777


Q ss_pred             CCCCCHHHHHHH
Q 047157          759 NLRPSMKKVIHM  770 (788)
Q Consensus       759 ~~RPt~~evl~~  770 (788)
                      ..||+++|++++
T Consensus       294 ~~R~~~~~~l~h  305 (381)
T cd05626         294 LGRNGADDIKAH  305 (381)
T ss_pred             cCCCCHHHHhcC
Confidence            779999999875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.5e-35  Score=313.85  Aligned_cols=269  Identities=24%  Similarity=0.363  Sum_probs=201.0

Q ss_pred             cccccccccccceEEEEEEe--ccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecC--CeEEEE
Q 047157          491 GFSKLVGTGSSGKVYRGILR--LKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE--DKRLLV  565 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~--~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~~~lV  565 (788)
                      .+.+.||+|+||+||++...  ....+..||+|.+.... ....+.+.+|++++++++||||+++++++...  ...++|
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            66789999999999887643  22456689999987543 34567888999999999999999999988653  468899


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++...  .+++.++..++.|++.||.|||++   +|+||||||+||+++     .++.+||+|||++..
T Consensus        87 ~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~-----~~~~~~l~dfg~~~~  156 (283)
T cd05080          87 MEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLD-----NDRLVKIGDFGLAKA  156 (283)
T ss_pred             ecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEc-----CCCcEEEeecccccc
Confidence            9999999999998543  589999999999999999999999   999999999999998     778999999999987


Q ss_pred             cCCCCCc--ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          646 LNKDQTR--TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       646 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      .......  ......++..|+|||.+.+..++.++||||||+++|||++|+.|+......... ..     .........
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~-~~-----~~~~~~~~~  230 (283)
T cd05080         157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEE-MI-----GPKQGQMTV  230 (283)
T ss_pred             cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhh-hh-----cccccccch
Confidence            6433221  112234566799999998889999999999999999999999998643211000 00     000000000


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ..+...+...............+.+++..||+.||++|||+++|+++|+.+.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         231 VRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             hhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            0001111111111111223467889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=4.9e-36  Score=317.47  Aligned_cols=263  Identities=25%  Similarity=0.427  Sum_probs=220.6

Q ss_pred             HHHHHhhcccccccccccceEEEEEEec--cCcceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecCC
Q 047157          484 ELQEATKGFSKLVGTGSSGKVYRGILRL--KDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED  560 (788)
Q Consensus       484 ~l~~~t~~~~~~lg~G~~g~Vy~~~~~~--~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  560 (788)
                      +|.++.....+.||.|-||.||+|++..  ++....||||..+.+ ..+..+.|+.|..+|++++||||++++|+|.+ .
T Consensus       385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~  463 (974)
T KOG4257|consen  385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-Q  463 (974)
T ss_pred             eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-c
Confidence            3444555566899999999999999874  345567999998763 45567899999999999999999999999965 5


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ..+||||.++-|.|..||+.+...++......++.||..||+|||+.   ..|||||..+|||+.     ...-+||+||
T Consensus       464 P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVs-----Sp~CVKLaDF  535 (974)
T KOG4257|consen  464 PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVS-----SPQCVKLADF  535 (974)
T ss_pred             ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeec-----Ccceeeeccc
Confidence            78999999999999999999989999999999999999999999999   999999999999998     7778999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHH-hCCCCCCccccccccccchhhhHHHHHH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII-CGRRHIELSRVEEESEEVDIVLSDWVIS  719 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~  719 (788)
                      |+++.+..+.....+...-...|||||-+.-..++.++|||-|||.+||++ .|..||.+....+...            
T Consensus       536 GLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~------------  603 (974)
T KOG4257|consen  536 GLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIG------------  603 (974)
T ss_pred             chhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEE------------
Confidence            999998877766666556678899999999999999999999999999988 5899998754332211            


Q ss_pred             HhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          720 CMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       720 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                               .+....+...+...+..+.-|+.+||+.||.+||.+.|+...|..+++
T Consensus       604 ---------~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  604 ---------HIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             ---------EecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence                     122233334455667788899999999999999999999888865543

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-36  Score=325.35  Aligned_cols=242  Identities=27%  Similarity=0.303  Sum_probs=201.5

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~  563 (788)
                      ....+.++||+|.||+|+++..+  .+++.+|||.+++..   .+..+..+.|.+++... +||.|++++..|+..+++|
T Consensus       368 ~~F~~l~vLGkGsFGkV~lae~k--~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~  445 (694)
T KOG0694|consen  368 DDFRLLAVLGRGSFGKVLLAELK--GTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF  445 (694)
T ss_pred             cceEEEEEeccCcCceEEEEEEc--CCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence            34567799999999999999988  677799999998764   44556778888888877 5999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +||||+.||++..+  .....+++..+.-++..|+.||.|||++   +||+||||.+|||||     .+|++||+|||++
T Consensus       446 fvmey~~Ggdm~~~--~~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD-----~eGh~kiADFGlc  515 (694)
T KOG0694|consen  446 FVMEYVAGGDLMHH--IHTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLD-----TEGHVKIADFGLC  515 (694)
T ss_pred             EEEEecCCCcEEEE--EecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEc-----ccCcEEecccccc
Confidence            99999999994333  3446788999999999999999999999   999999999999999     8999999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      +....... ...+++||+.|||||++.+..|+.++|.|||||+||||+.|..||.+.+.++.-            ..+..
T Consensus       516 Ke~m~~g~-~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~F------------dsI~~  582 (694)
T KOG0694|consen  516 KEGMGQGD-RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVF------------DSIVN  582 (694)
T ss_pred             cccCCCCC-ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHH------------HHHhc
Confidence            97543333 445699999999999999999999999999999999999999999987544321            11111


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCH
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSM  764 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~  764 (788)
                                .+...+.....+.+.++.++|..+|++|--+
T Consensus       583 ----------d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  583 ----------DEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             ----------CCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence                      1222333445678889999999999999865

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=1.1e-35  Score=324.93  Aligned_cols=246  Identities=24%  Similarity=0.388  Sum_probs=191.6

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      .+.++||+|+||+||++...  .+++.||||.+.... ....+.+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus        77 ~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  154 (353)
T PLN00034         77 ERVNRIGSGAGGTVYKVIHR--PTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM  154 (353)
T ss_pred             hhhhhccCCCCeEEEEEEEC--CCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence            34578999999999999876  567799999986432 344568899999999999999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|.+..     ...+..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++..+...
T Consensus       155 ~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~-----~~~~~kL~DfG~~~~~~~~  221 (353)
T PLN00034        155 DGGSLEGTH-----IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLIN-----SAKNVKIADFGVSRILAQT  221 (353)
T ss_pred             CCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEc-----CCCCEEEcccccceecccc
Confidence            999986532     346677889999999999999999   999999999999998     7889999999999876433


Q ss_pred             CCcccccccCCccccCcccccC-----CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRN-----VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~-----~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .. ......|+..|+|||.+..     ...+.++|||||||++|||++|+.||......+.        ......... .
T Consensus       222 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~--------~~~~~~~~~-~  291 (353)
T PLN00034        222 MD-PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDW--------ASLMCAICM-S  291 (353)
T ss_pred             cc-cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccH--------HHHHHHHhc-c
Confidence            22 1223568999999998743     2345689999999999999999999973321110        000000000 0


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                             ..+.  .......++.+++.+||+.||++|||+.|++++
T Consensus       292 -------~~~~--~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        292 -------QPPE--APATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             -------CCCC--CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                   0000  111234578899999999999999999999985

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.7e-35  Score=316.65  Aligned_cols=262  Identities=22%  Similarity=0.280  Sum_probs=196.4

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .|.+.+.||+|+||.||+|...  .++..||+|.+.... ......+.+|++++++++||||+++++++.+.+..++|||
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           6 SYEKLEKLGEGSYATVYKGKSK--VNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cceEeeeEEecCCEEEEEEEEC--CCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            4667789999999999999886  567789999986443 2233467889999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |++ ++|.+++......++...+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||++....
T Consensus        84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~-----~~~~~kl~Dfg~~~~~~  154 (303)
T cd07869          84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLIS-----DTGELKLADFGLARAKS  154 (303)
T ss_pred             CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEC-----CCCCEEECCCCcceecc
Confidence            995 688888876666788899999999999999999999   999999999999998     77899999999987543


Q ss_pred             CCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc-
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN-  725 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  725 (788)
                      ... .......+++.|+|||++.+ ..++.++|||||||++|||++|+.||........      .+.. ......... 
T Consensus       155 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~------~~~~-~~~~~~~~~~  226 (303)
T cd07869         155 VPS-HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQD------QLER-IFLVLGTPNE  226 (303)
T ss_pred             CCC-ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH------HHHH-HHHHhCCCCh
Confidence            222 12233567899999998865 4578899999999999999999999975421110      0000 000000000 


Q ss_pred             --------ccccccC-----CCCCc----ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          726 --------LQVLVSH-----DPEVL----SDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       726 --------~~~l~~~-----~~~~~----~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                              .......     .+...    ........+.+++.+||+.||++|||++|+++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         227 DTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             hhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence                    0000000     00000    00012246778999999999999999999986

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=1.6e-35  Score=311.23  Aligned_cols=261  Identities=23%  Similarity=0.377  Sum_probs=206.3

Q ss_pred             HHHhhcccccccccccceEEEEEEecc-Ccceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      ...++.+.++||+|+||.||+|..... .....|++|...... ....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~   82 (270)
T cd05056           4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW   82 (270)
T ss_pred             chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence            345567789999999999999987533 334578999887654 4556789999999999999999999998875 5578


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +||||+++++|.+++......+++..+..++.|++.||.|||+.   +++|+||||+||+++     .++.+||+|||++
T Consensus        83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~-----~~~~~~l~d~g~~  154 (270)
T cd05056          83 IVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVS-----SPDCVKLGDFGLS  154 (270)
T ss_pred             EEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEe-----cCCCeEEccCcee
Confidence            99999999999999977666789999999999999999999998   999999999999998     7789999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ...............++..|+|||.+....++.++||||||+++||+++ |+.||......+..        .    ...
T Consensus       155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~--------~----~~~  222 (270)
T cd05056         155 RYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI--------G----RIE  222 (270)
T ss_pred             eecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHH--------H----HHH
Confidence            8665443222222334568999999988889999999999999999986 99999654321110        0    010


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ...       .+.  ........+.+++.+|+..+|++|||+.++++.|+++..
T Consensus       223 ~~~-------~~~--~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~  267 (270)
T cd05056         223 NGE-------RLP--MPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ  267 (270)
T ss_pred             cCC-------cCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            100       000  011224578889999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=9e-36  Score=321.36  Aligned_cols=243  Identities=26%  Similarity=0.339  Sum_probs=194.7

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEEecC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      ++||+|+||.||+|...  .++..||+|.+....   ....+.+..|.+++..+ +||||+++++++.+.+..++||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~   78 (321)
T cd05591           1 KVLGKGSFGKVMLAELK--GTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYV   78 (321)
T ss_pred             CccccCCCeEEEEEEEC--CCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCC
Confidence            46899999999999876  667799999987542   23345677888888865 7999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|..++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++......
T Consensus        79 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~-----~~~~~kL~Dfg~~~~~~~~  149 (321)
T cd05591          79 NGGDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLD-----AEGHCKLADFGMCKEGILN  149 (321)
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEEC-----CCCCEEEeecccceecccC
Confidence            999999988654 5678889999999999999999999   999999999999998     7889999999998754322


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      .. ......|++.|+|||++.+..++.++||||||+++|||++|+.||......+..            ........   
T Consensus       150 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~------------~~i~~~~~---  213 (321)
T cd05591         150 GV-TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLF------------ESILHDDV---  213 (321)
T ss_pred             Cc-cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHH------------HHHHcCCC---
Confidence            21 223456899999999999999999999999999999999999999765322110            11111110   


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-------CHHHHHHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-------SMKKVIHM  770 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-------t~~evl~~  770 (788)
                           .  .+......+.+++..||+.||++||       ++++++++
T Consensus       214 -----~--~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         214 -----L--YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             -----C--CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence                 0  0111235678899999999999999       88888754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.2e-35  Score=320.62  Aligned_cols=245  Identities=25%  Similarity=0.281  Sum_probs=194.9

Q ss_pred             ccccccccceEEEEEEec-cCcceeeeeeecccch----HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          494 KLVGTGSSGKVYRGILRL-KDTQIEIAVKKLEKDI----EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      +.||+|+||.||++.... ...+..||+|.+....    ......+.+|++++++++||||+++++++.+++..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            579999999999998642 2456789999987532    23345678899999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++++|.+++... ..+.+..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+++....
T Consensus        82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~-----~~~~~kl~Dfg~~~~~~~  152 (323)
T cd05584          82 LSGGELFMHLERE-GIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLD-----AQGHVKLTDFGLCKESIH  152 (323)
T ss_pred             CCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEC-----CCCCEEEeeCcCCeeccc
Confidence            9999999998654 4567888888999999999999999   999999999999998     788999999999875432


Q ss_pred             CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      ... ......|++.|+|||++.+..++.++||||||+++|||++|+.||.......            ..........  
T Consensus       153 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~------------~~~~~~~~~~--  217 (323)
T cd05584         153 EGT-VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK------------TIDKILKGKL--  217 (323)
T ss_pred             CCC-cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH------------HHHHHHcCCC--
Confidence            222 2223568999999999998889999999999999999999999997542211            0111111110  


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIHM  770 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~  770 (788)
                            ..  +......+.+++.+||+.||++||     ++++++++
T Consensus       218 ------~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h  256 (323)
T cd05584         218 ------NL--PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH  256 (323)
T ss_pred             ------CC--CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence                  00  111235678899999999999999     78888763

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=1.6e-35  Score=313.07  Aligned_cols=246  Identities=27%  Similarity=0.322  Sum_probs=195.2

Q ss_pred             ccccccceEEEEEEeccCcceeeeeeecccchH---HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCC
Q 047157          496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       496 lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      ||+|+||+||++...  .++..+|+|.+.....   ...+.+..|++++++++||||+++.+++..+...++||||++++
T Consensus         1 lg~G~~g~Vy~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g   78 (280)
T cd05608           1 LGKGGFGEVSACQMR--ATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGG   78 (280)
T ss_pred             CCCCCceeEEEEEEc--cCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCC
Confidence            699999999999876  5677999999865422   23356788999999999999999999999999999999999999


Q ss_pred             CHhHhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          573 TLSNFLFH---EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       573 sL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      +|..++..   ....+++..+..++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++......
T Consensus        79 ~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~-----~~~~~~l~dfg~~~~~~~~  150 (280)
T cd05608          79 DLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLD-----NDGNVRISDLGLAVELKDG  150 (280)
T ss_pred             CHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEC-----CCCCEEEeeCccceecCCC
Confidence            99988753   335688999999999999999999999   999999999999998     7788999999999765433


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      ... .....|++.|+|||.+.+..++.++||||||+++|||++|+.||..........       . ......       
T Consensus       151 ~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~-------~-~~~~~~-------  214 (280)
T cd05608         151 QSK-TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK-------E-LKQRIL-------  214 (280)
T ss_pred             Ccc-ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHH-------H-HHHhhc-------
Confidence            221 223568999999999999999999999999999999999999997542211000       0 000000       


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIHM  770 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~  770 (788)
                       ....  .........+.+++.+||+.||++||     ++++++++
T Consensus       215 -~~~~--~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         215 -NDSV--TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             -ccCC--CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence             0000  11122345678899999999999999     78888864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=8.1e-36  Score=321.36  Aligned_cols=242  Identities=27%  Similarity=0.387  Sum_probs=193.5

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEEecC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      ++||+|+||+||++..+  .++..||+|.+.+..   ....+.+..|..++..+ +||||+++++++.+.+..++||||+
T Consensus         1 ~~lg~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~   78 (320)
T cd05590           1 RVLGKGSFGKVMLARLK--ESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFV   78 (320)
T ss_pred             CeeeeCCCeEEEEEEEc--CCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCC
Confidence            46899999999999876  567799999987542   23445677888888776 7999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++......
T Consensus        79 ~~g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~-----~~~~~kL~DfG~~~~~~~~  149 (320)
T cd05590          79 NGGDLMFHIQKS-RRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLD-----HEGHCKLADFGMCKEGIFN  149 (320)
T ss_pred             CCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEEC-----CCCcEEEeeCCCCeecCcC
Confidence            999999988654 5688899999999999999999999   999999999999998     7889999999998754222


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      . .......|++.|+|||++.+..++.++||||||+++|||++|+.||......+.            .........   
T Consensus       150 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~------------~~~i~~~~~---  213 (320)
T cd05590         150 G-KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL------------FEAILNDEV---  213 (320)
T ss_pred             C-CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH------------HHHHhcCCC---
Confidence            1 122335689999999999999999999999999999999999999975432111            111111110   


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCH------HHHHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSM------KKVIH  769 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~------~evl~  769 (788)
                           .  ........+.+++.+||+.||++||++      +++++
T Consensus       214 -----~--~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~  252 (320)
T cd05590         214 -----V--YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILR  252 (320)
T ss_pred             -----C--CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHc
Confidence                 0  011124567889999999999999998      66654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=2.7e-35  Score=305.68  Aligned_cols=247  Identities=26%  Similarity=0.427  Sum_probs=198.0

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      ++||+|+||.||+|...   .+..+++|.+.... ......+.+|++++++++||||+++++++...+..++||||++++
T Consensus         1 ~~ig~g~~g~vy~~~~~---~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   77 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK---DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG   77 (250)
T ss_pred             CccCCCCCceEEEEEec---CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence            46899999999999863   45689999886543 334457899999999999999999999999999999999999999


Q ss_pred             CHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCc
Q 047157          573 TLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR  652 (788)
Q Consensus       573 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~  652 (788)
                      +|.+++......+++..+..++.|++.||.|||++   +++|+||||+||+++     .++.+||+|||++.........
T Consensus        78 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~-----~~~~~~l~d~g~~~~~~~~~~~  149 (250)
T cd05085          78 DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVG-----ENNVLKISDFGMSRQEDDGIYS  149 (250)
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEc-----CCCeEEECCCccceeccccccc
Confidence            99999976666789999999999999999999998   999999999999998     7889999999998754433222


Q ss_pred             ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhccccccccc
Q 047157          653 TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVS  731 (788)
Q Consensus       653 ~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  731 (788)
                      ......++..|+|||++....++.++||||||+++||+++ |..||........            ........      
T Consensus       150 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~------------~~~~~~~~------  211 (250)
T cd05085         150 SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA------------REQVEKGY------  211 (250)
T ss_pred             cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH------------HHHHHcCC------
Confidence            2222334667999999998899999999999999999998 8889864422110            01111110      


Q ss_pred             CCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          732 HDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       732 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                       ..  .........+.+++.+|++.+|++||++.|+++.|.
T Consensus       212 -~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         212 -RM--SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             -CC--CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence             00  011123467888999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=1.3e-35  Score=320.52  Aligned_cols=246  Identities=26%  Similarity=0.295  Sum_probs=193.8

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHh---cCCCccccceEeeEEecCCeEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKII---GRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l---~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      |.+.+.||+|+||.||++...  .++..||||.++...   ....+.+.+|++++   ++++||||+++++++.+.+..+
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~   78 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYK--KTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVC   78 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEEC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEE
Confidence            356789999999999999886  667799999987542   22334566666554   5678999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +||||+++++|..++..  ..+++..+..++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++
T Consensus        79 lv~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~-----~~~~~kL~Dfg~~  148 (324)
T cd05589          79 FVMEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLD-----TEGFVKIADFGLC  148 (324)
T ss_pred             EEEcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEEC-----CCCcEEeCcccCC
Confidence            99999999999988843  4689999999999999999999999   999999999999998     7889999999998


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ....... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||......+..            .....
T Consensus       149 ~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~------------~~i~~  215 (324)
T cd05589         149 KEGMGFG-DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF------------DSIVN  215 (324)
T ss_pred             ccCCCCC-CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHH------------HHHHh
Confidence            7543222 1223457899999999999999999999999999999999999999754321110            01111


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIHM  770 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~  770 (788)
                      ..        +..  .......+.+++.+||+.||++||     ++.+++++
T Consensus       216 ~~--------~~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~  257 (324)
T cd05589         216 DE--------VRY--PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ  257 (324)
T ss_pred             CC--------CCC--CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence            11        110  111245677899999999999999     57777664

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=1.6e-35  Score=313.55  Aligned_cols=258  Identities=24%  Similarity=0.337  Sum_probs=202.7

Q ss_pred             HHhhcccccccccccceEEEEEEecc---Ccceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLK---DTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      ...+.+.+.||+|+||.||+|.....   ..+..||+|.+.... ....+.+.+|+.++.+++||||+++++++.+.+..
T Consensus         4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~   83 (283)
T cd05091           4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL   83 (283)
T ss_pred             HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence            34566778999999999999987532   235689999997543 33456788999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhcc---------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccC
Q 047157          563 LLVYELMPNGTLSNFLFHE---------------GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLK  627 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~---------------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  627 (788)
                      ++++||+++++|.+++...               ...+++..+..++.|++.||.|||++   +|+||||||+||+++  
T Consensus        84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~--  158 (283)
T cd05091          84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVF--  158 (283)
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEec--
Confidence            9999999999999998532               23467888999999999999999998   999999999999998  


Q ss_pred             CCCCCCcEEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccc
Q 047157          628 TLDTNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEE  705 (788)
Q Consensus       628 ~~~~~~~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~  705 (788)
                         ++..+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |..||......+ 
T Consensus       159 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-  234 (283)
T cd05091         159 ---DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD-  234 (283)
T ss_pred             ---CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHH-
Confidence               778899999999886543222 11223345778999999988889999999999999999998 778886532211 


Q ss_pred             cccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          706 SEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       706 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                                 ............         ........+.+++..||+.+|++||++++|++.|+.
T Consensus       235 -----------~~~~i~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         235 -----------VIEMIRNRQVLP---------CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             -----------HHHHHHcCCcCC---------CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence                       111111111110         111234567889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=2e-35  Score=309.09  Aligned_cols=254  Identities=26%  Similarity=0.416  Sum_probs=201.5

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ...|.+.++||+|+||.||+|...  +. ..|++|.++.... ..+.+.+|++++++++||||+++++++.+ ...++||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~-~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~   79 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWN--GT-TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT   79 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEec--CC-ceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEE
Confidence            456788899999999999999874  33 4699999875322 34578999999999999999999998754 5679999


Q ss_pred             ecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+++++|.+++... +..+++..+..++.|++.||+|||+.   +|+|+||||+||+++     +++.+||+|||.+..
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~-----~~~~~~L~dfg~~~~  151 (262)
T cd05071          80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG-----ENLVCKVADFGLARL  151 (262)
T ss_pred             EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEc-----CCCcEEeccCCceee
Confidence            999999999999753 34578999999999999999999998   999999999999998     788999999999986


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .............++..|+|||...+..++.++||||||+++|||++ |+.||......+.            .......
T Consensus       152 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~------------~~~~~~~  219 (262)
T cd05071         152 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV------------LDQVERG  219 (262)
T ss_pred             ccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH------------HHHHhcC
Confidence            65433222223446678999999988899999999999999999999 7888864421110            0111110


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      .         ......+..+.+.+++.+|++.||++||+++++++.|+..
T Consensus       220 ~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         220 Y---------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             C---------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence            0         0011123456788999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-35  Score=317.22  Aligned_cols=256  Identities=25%  Similarity=0.293  Sum_probs=212.4

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHH---HHHHHHHHHHHhcCCC-ccccceEeeEEecCCeE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK---TNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~  562 (788)
                      ...|.+.+.||+|.||.||+++.+  .++..+|+|.+.+....   ..+.+.+|+++|+++. |||||.+++++++....
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~--~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~  111 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREK--STGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV  111 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEec--CCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence            445777799999999999999987  66889999999765432   3468999999999998 99999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++|||++.||.|.+.+.+.  .+++.....++.||+.++.|||+.   +|+||||||+|+|+..... .++.+|++|||+
T Consensus       112 ~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~-~~~~ik~~DFGl  185 (382)
T KOG0032|consen  112 YLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDE-GSGRIKLIDFGL  185 (382)
T ss_pred             EEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccC-CCCcEEEeeCCC
Confidence            9999999999999999776  399999999999999999999998   9999999999999985431 246899999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      +.....  .......+||+.|+|||++....|+..+||||+|+++|.|++|..||..........            .+.
T Consensus       186 a~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~------------~i~  251 (382)
T KOG0032|consen  186 AKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL------------AIL  251 (382)
T ss_pred             ceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH------------HHH
Confidence            998776  334556899999999999999999999999999999999999999998764322111            111


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .+..      ......-....+.+.+++..|+..||.+|+|+.+++++
T Consensus       252 ~~~~------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  252 RGDF------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             cCCC------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence            1211      11111112335677889999999999999999999985

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-36  Score=310.61  Aligned_cols=247  Identities=22%  Similarity=0.333  Sum_probs=209.6

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      |.+.+.||+|-|+.|-+|++.  -++..||||++.+..  .-....+.+|++.|+.++|||||++|++......+|||+|
T Consensus        20 YDLekTlG~GHFAVVKLArHV--FTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE   97 (864)
T KOG4717|consen   20 YDLEKTLGRGHFAVVKLARHV--FTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE   97 (864)
T ss_pred             ehhhhhhcCCceehhhhhhhh--cccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence            556788999999999999887  678899999997643  2334578899999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      .-++|+|.+|+.+....+.+....+++.||+.|+.|+|+.   .+|||||||+||.+.    ..-+-+||.|||++..+.
T Consensus        98 LGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFF----EKlGlVKLTDFGFSNkf~  170 (864)
T KOG4717|consen   98 LGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFF----EKLGLVKLTDFGFSNKFQ  170 (864)
T ss_pred             ecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEe----eecCceEeeeccccccCC
Confidence            9999999999999889999999999999999999999999   999999999999986    267899999999998876


Q ss_pred             CCCCcccccccCCccccCcccccCCCCC-ccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNVPVT-TKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      +....  +..+|+..|.|||++.+..|+ ++.||||||||||.|++|+.||+..+..+..                    
T Consensus       171 PG~kL--~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETL--------------------  228 (864)
T KOG4717|consen  171 PGKKL--TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETL--------------------  228 (864)
T ss_pred             Ccchh--hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhh--------------------
Confidence            65443  456899999999999999987 6899999999999999999999754332211                    


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ..++  +-...-+.....++.+||..||..||.+|-+.+||+.
T Consensus       229 TmIm--DCKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  229 TMIM--DCKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             hhhh--cccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence            1111  1112223455678999999999999999999999975

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=2.4e-35  Score=311.66  Aligned_cols=257  Identities=26%  Similarity=0.404  Sum_probs=203.3

Q ss_pred             HhhcccccccccccceEEEEEEec---cCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ..+.+.++||+|+||.||++....   ...+..+++|.+........+.+.+|++++++++|+||+++++++.+....++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            345567899999999999997531   23456899999887666677889999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccC--------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCC
Q 047157          565 VYELMPNGTLSNFLFHEG--------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD  630 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~  630 (788)
                      |+||+++++|.+++....              ..+++..++.++.||+.||+|||+.   +++||||||+|||++     
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~-----  156 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVG-----  156 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEc-----
Confidence            999999999999986542              2478899999999999999999998   999999999999998     


Q ss_pred             CCCcEEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCcccccccccc
Q 047157          631 TNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEE  708 (788)
Q Consensus       631 ~~~~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~  708 (788)
                      +++.+||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+.   
T Consensus       157 ~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~---  233 (280)
T cd05092         157 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA---  233 (280)
T ss_pred             CCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH---
Confidence            788999999999876533221 11122335678999999999999999999999999999998 8888854321110   


Q ss_pred             chhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          709 VDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       709 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                               ......+..       .  .........+.+++.+||+.||++||+++||++.|++
T Consensus       234 ---------~~~~~~~~~-------~--~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~  280 (280)
T cd05092         234 ---------IECITQGRE-------L--ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA  280 (280)
T ss_pred             ---------HHHHHcCcc-------C--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence                     000111100       0  0011223567889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.8e-35  Score=314.87  Aligned_cols=261  Identities=28%  Similarity=0.409  Sum_probs=205.4

Q ss_pred             HHHhhcccccccccccceEEEEEEecc---Ccceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecCC
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRLK---DTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEED  560 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~  560 (788)
                      ....+.+.+.||+|+||.||++.....   .....+++|.+.... .....++.+|++++.++ +||||+++++++..++
T Consensus        10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~   89 (293)
T cd05053          10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG   89 (293)
T ss_pred             CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence            344566778999999999999987632   234689999887532 34456788999999999 8999999999999999


Q ss_pred             eEEEEEecCCCCCHhHhhhcc---------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEec
Q 047157          561 KRLLVYELMPNGTLSNFLFHE---------------GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLD  625 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~---------------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  625 (788)
                      ..+++|||+++++|.+++...               ...+++..++.++.||+.||.|||+.   +|+||||||+||+++
T Consensus        90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~  166 (293)
T cd05053          90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVT  166 (293)
T ss_pred             CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEc
Confidence            999999999999999998532               34678999999999999999999998   999999999999998


Q ss_pred             cCCCCCCCcEEEeecCCccccCCCCCcc-cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccc
Q 047157          626 LKTLDTNYMAKISDFGISKLLNKDQTRT-DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVE  703 (788)
Q Consensus       626 ~~~~~~~~~~kL~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~  703 (788)
                           .++.+||+|||++..+....... .....++..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus       167 -----~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~  241 (293)
T cd05053         167 -----EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE  241 (293)
T ss_pred             -----CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH
Confidence                 78899999999998765432211 122335678999999988899999999999999999997 88888654221


Q ss_pred             cccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          704 EESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       704 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      +.            ........         ...........+.+++.+||+.||++|||++|+++.|+++.
T Consensus       242 ~~------------~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         242 EL------------FKLLKEGY---------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             HH------------HHHHHcCC---------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            11            01111110         00111123457889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-36  Score=319.45  Aligned_cols=261  Identities=26%  Similarity=0.418  Sum_probs=216.5

Q ss_pred             HHHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       483 ~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      -|+++......++||-|.||.||.|+++  .-...||||.++.+.- ..++|++|..+|+.++|||+|+++|+|..+...
T Consensus       262 WEmeRtdItMkhKLGGGQYGeVYeGvWK--kyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF  338 (1157)
T KOG4278|consen  262 WEMERTDITMKHKLGGGQYGEVYEGVWK--KYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF  338 (1157)
T ss_pred             hhccchheeeeeccCCCcccceeeeeee--ccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence            3455555566789999999999999998  6667899999986643 457999999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccCC-CCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQ-RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      |||+|||..|+|.+||+...+ ..+....+.++.||+.|+.||..+   ++|||||..+|.|+.     ++..+|++|||
T Consensus       339 YIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVg-----EnhiVKvADFG  410 (1157)
T KOG4278|consen  339 YIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVG-----ENHIVKVADFG  410 (1157)
T ss_pred             EEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhcccc-----ccceEEeeccc
Confidence            999999999999999987644 456677789999999999999999   999999999999998     88899999999


Q ss_pred             CccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHH
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      +++++..+.........-.+.|.|||-+....++.|+|||+|||+||||.| |-.||.+.+...            +.  
T Consensus       411 LsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSq------------VY--  476 (1157)
T KOG4278|consen  411 LSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------------VY--  476 (1157)
T ss_pred             hhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHH------------HH--
Confidence            999987665544444455778999999999999999999999999999997 667887643211            11  


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                             .++...-....+..+++.+.+|++.||+.+|.+||++.|+-+.+|.+.
T Consensus       477 -------~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf  524 (1157)
T KOG4278|consen  477 -------GLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF  524 (1157)
T ss_pred             -------HHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence                   122222333334456678889999999999999999999999887654

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=1.5e-35  Score=318.67  Aligned_cols=242  Identities=28%  Similarity=0.351  Sum_probs=190.4

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcC-CCccccceEeeEEecCCeEEEEEecC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGR-THHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      ++||+|+||.||+|...  .++..||+|.+....   ....+.+..|..++.. .+||||+++++++...+..++||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~   78 (316)
T cd05592           1 KVLGKGSFGKVMLAELK--GTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYL   78 (316)
T ss_pred             CeeeeCCCeEEEEEEEC--CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCC
Confidence            46899999999999886  667789999987543   2233455667777764 48999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++......
T Consensus        79 ~gg~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~-----~~~~~kL~Dfg~a~~~~~~  149 (316)
T cd05592          79 NGGDLMFHIQSS-GRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLD-----KDGHIKIADFGMCKENMNG  149 (316)
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEEC-----CCCCEEEccCcCCeECCCC
Confidence            999999988654 4688889999999999999999998   999999999999998     7789999999999754322


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      . .......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+.           . ......     
T Consensus       150 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~-----------~-~~i~~~-----  211 (316)
T cd05592         150 E-GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDEL-----------F-DSILND-----  211 (316)
T ss_pred             C-CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHH-----------H-HHHHcC-----
Confidence            2 222345689999999999999999999999999999999999999975432111           0 001100     


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHH-HHHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMK-KVIH  769 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-evl~  769 (788)
                         .+..  +......+.+++.+||+.||++||++. ++++
T Consensus       212 ---~~~~--~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05592         212 ---RPHF--PRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ  247 (316)
T ss_pred             ---CCCC--CCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence               0000  111234567889999999999999875 5543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=1.5e-35  Score=321.35  Aligned_cols=254  Identities=25%  Similarity=0.271  Sum_probs=198.1

Q ss_pred             hcccccccccccceEEEEEEec-cCcceeeeeeecccch----HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRL-KDTQIEIAVKKLEKDI----EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~  563 (788)
                      |.+.+.||+|+||.||++.... ...+..||+|.+.+..    ....+.+.+|+.++..+ +||||+++++++..++..+
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (332)
T cd05614           2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH   81 (332)
T ss_pred             ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence            5567899999999999987642 2456789999986532    23345678899999999 5999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +||||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++
T Consensus        82 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~-----~~~~~kl~DfG~~  152 (332)
T cd05614          82 LILDYVSGGEMFTHLYQR-DNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLD-----SEGHVVLTDFGLS  152 (332)
T ss_pred             EEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEEC-----CCCCEEEeeCcCC
Confidence            999999999999998654 5678899999999999999999999   999999999999998     7789999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ...............||+.|+|||.+.+. .++.++||||||+++|||++|+.||..........        .......
T Consensus       153 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~--------~~~~~~~  224 (332)
T cd05614         153 KEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQS--------EVSRRIL  224 (332)
T ss_pred             ccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHH--------HHHHHHh
Confidence            86544333333346789999999999765 47889999999999999999999996532211100        0111111


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIHM  770 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~  770 (788)
                      .        ..+..  .......+.+++.+||+.||++||     ++++++++
T Consensus       225 ~--------~~~~~--~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  267 (332)
T cd05614         225 K--------CDPPF--PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH  267 (332)
T ss_pred             c--------CCCCC--CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence            0        01111  112245677899999999999999     77788754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=8.1e-36  Score=302.76  Aligned_cols=265  Identities=25%  Similarity=0.304  Sum_probs=202.3

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchH--HHHHHHHHHHHHhcCCCccc-cceEeeEEecCC------
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE--KTNEEFMTELKIIGRTHHKN-LVRLLGFCSEED------  560 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~hpn-iv~~~~~~~~~~------  560 (788)
                      +...++||+|.||+||+|+.+  .++..||+|+++-...  ..-....+|+.++++++|+| |+++++++...+      
T Consensus        13 ~~~~eklGeGtyg~Vykar~~--~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~   90 (323)
T KOG0594|consen   13 YEKVEKLGEGTYGVVYKARSK--RTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG   90 (323)
T ss_pred             HHHHHHhCCCCceEEEEEEEe--cCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence            333467999999999999988  5667999999875533  23345689999999999999 999999998877      


Q ss_pred             eEEEEEecCCCCCHhHhhhccC---CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          561 KRLLVYELMPNGTLSNFLFHEG---QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                      ..++|+||+ .-+|..++....   ...+...+..++.||++||+|||++   +|+||||||+||||+     +.+.+||
T Consensus        91 ~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~-----~~G~lKl  161 (323)
T KOG0594|consen   91 KLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLIS-----SSGVLKL  161 (323)
T ss_pred             eEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEEC-----CCCcEee
Confidence            889999999 569999997665   3577788999999999999999999   999999999999999     7899999


Q ss_pred             eecCCccccCCCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHH
Q 047157          638 SDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDW  716 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~  716 (788)
                      +|||+|+...-.. ...+....|..|+|||++.+. .|+...||||+|||+.||++++..|.+....++...        
T Consensus       162 aDFGlAra~~ip~-~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~--------  232 (323)
T KOG0594|consen  162 ADFGLARAFSIPM-RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFR--------  232 (323)
T ss_pred             eccchHHHhcCCc-ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHH--------
Confidence            9999999654322 224456789999999999876 799999999999999999999999987654322211        


Q ss_pred             HHHHhhcc---cc---cccccCC--------CCCccc--HHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--hhcC
Q 047157          717 VISCMLSR---NL---QVLVSHD--------PEVLSD--LERFERMAMVGLWCNHPDPNLRPSMKKVIHM--LEGT  774 (788)
Q Consensus       717 ~~~~~~~~---~~---~~l~~~~--------~~~~~~--~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~~  774 (788)
                      +...+..+   ..   ..+.+..        +.....  ........+++.+||+.+|++|.|++.++.+  +..+
T Consensus       233 If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~  308 (323)
T KOG0594|consen  233 IFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL  308 (323)
T ss_pred             HHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence            11111110   00   0000111        000000  0111467889999999999999999999986  5443

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=2.5e-35  Score=318.75  Aligned_cols=252  Identities=25%  Similarity=0.350  Sum_probs=194.9

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEEecC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      +.||+|+||.||++...  .++..+|+|.+.+..   ....+.+..|+.++.++ +||||+++++++.+.+..++||||+
T Consensus         1 ~~lG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~   78 (329)
T cd05618           1 RVIGRGSYAKVLLVRLK--KTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV   78 (329)
T ss_pred             CeeeeCCCeEEEEEEEC--CCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCC
Confidence            46899999999999886  667789999987542   23445678888888776 8999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|..++... ..+++..+..++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++......
T Consensus        79 ~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~-----~~~~~kL~DfG~~~~~~~~  149 (329)
T cd05618          79 NGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLD-----SEGHIKLTDYGMCKEGLRP  149 (329)
T ss_pred             CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEC-----CCCCEEEeeCCccccccCC
Confidence            999999888544 5688999999999999999999999   999999999999998     7889999999998753222


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      .. ......||+.|+|||++.+..++.++||||||+++|||++|+.||..........   .....+..........   
T Consensus       150 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~---~~~~~~~~~~i~~~~~---  222 (329)
T cd05618         150 GD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD---QNTEDYLFQVILEKQI---  222 (329)
T ss_pred             CC-ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcc---cccHHHHHHHHhcCCC---
Confidence            11 2234578999999999999999999999999999999999999996422111100   0111122222211111   


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC------HHHHHHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS------MKKVIHM  770 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt------~~evl~~  770 (788)
                           ..  +......+.+++.+||+.||++||+      +.+++++
T Consensus       223 -----~~--p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05618         223 -----RI--PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  262 (329)
T ss_pred             -----CC--CCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence                 11  1122356778999999999999998      4676543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=1.4e-35  Score=325.42  Aligned_cols=254  Identities=22%  Similarity=0.243  Sum_probs=198.7

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      ...|.+.+.||+|+||.||++...  .++..+|+|.+.+..   ....+.+.+|+.+++.++||||+++++++.+++..+
T Consensus        42 ~~~y~~~~~lG~G~fg~Vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~  119 (370)
T cd05621          42 AEDYDVVKVIGRGAFGEVQLVRHK--SSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY  119 (370)
T ss_pred             HHHCeEEEEEEecCCeEEEEEEEC--CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence            355777889999999999999886  667789999986432   223456789999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +||||+++|+|.+++...  .+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||++
T Consensus       120 lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~-----~~~~~kL~DFG~a  189 (370)
T cd05621         120 MVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLD-----KHGHLKLADFGTC  189 (370)
T ss_pred             EEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEC-----CCCCEEEEecccc
Confidence            999999999999998543  578888999999999999999999   999999999999998     7889999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCC----CCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHH
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVP----VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVIS  719 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  719 (788)
                      ...............||+.|+|||++.+..    ++.++||||+||++|||++|+.||........            ..
T Consensus       190 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~------------~~  257 (370)
T cd05621         190 MKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT------------YS  257 (370)
T ss_pred             eecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH------------HH
Confidence            876543332333467999999999986543    78899999999999999999999975432111            00


Q ss_pred             HhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCC--CCCHHHHHHH
Q 047157          720 CMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNL--RPSMKKVIHM  770 (788)
Q Consensus       720 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~  770 (788)
                      .......      .............+.+++..|++.+|.+  ||+++|++++
T Consensus       258 ~i~~~~~------~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         258 KIMDHKN------SLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             HHHhCCc------ccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence            1111000      0111112233456677888898755543  8999999986

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=2.9e-35  Score=309.36  Aligned_cols=251  Identities=29%  Similarity=0.435  Sum_probs=196.5

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEEecCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELMPN  571 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~e~~~~  571 (788)
                      +.||+|+||.||+|.....+....+++|.+.... ....+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            4689999999999998744344567889887432 44556889999999999 799999999999999999999999999


Q ss_pred             CCHhHhhhccC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEE
Q 047157          572 GTLSNFLFHEG---------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAK  636 (788)
Q Consensus       572 gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~k  636 (788)
                      ++|.+++....               ..+++.++..++.|++.||+|||+.   +++|+||||+||+++     .++.+|
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~-----~~~~~k  152 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG-----ENYVAK  152 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEc-----CCCeEE
Confidence            99999986432               2468899999999999999999998   999999999999998     788999


Q ss_pred             EeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHH
Q 047157          637 ISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSD  715 (788)
Q Consensus       637 L~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~  715 (788)
                      |+|||++......  ........+..|+|||++....++.++||||||+++|||++ |..||......+.          
T Consensus       153 l~dfgl~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~----------  220 (270)
T cd05047         153 IADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL----------  220 (270)
T ss_pred             ECCCCCccccchh--hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHH----------
Confidence            9999998632211  11111233567999999988899999999999999999997 9999864321110          


Q ss_pred             HHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          716 WVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       716 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                        ........       ...  ........+.+++.+||+.||.+|||+.++++.|++++
T Consensus       221 --~~~~~~~~-------~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         221 --YEKLPQGY-------RLE--KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             --HHHHhCCC-------CCC--CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence              00111110       000  01122356789999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=2.6e-35  Score=314.89  Aligned_cols=261  Identities=27%  Similarity=0.422  Sum_probs=205.1

Q ss_pred             HHHhhcccccccccccceEEEEEEe---ccCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecCC
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEED  560 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~---~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~  560 (788)
                      ....+.+.+.||+|+||.||++...   .......||+|.++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus        33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  112 (302)
T cd05055          33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG  112 (302)
T ss_pred             cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence            3445677899999999999999753   12345689999887543 34456789999999999 7999999999999999


Q ss_pred             eEEEEEecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEee
Q 047157          561 KRLLVYELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD  639 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~D  639 (788)
                      ..++||||+++++|.+++.... ..+++.++..++.||+.||.|||++   +|+|+||||+|||++     .+..+||+|
T Consensus       113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~-----~~~~~~l~d  184 (302)
T cd05055         113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLT-----HGKIVKICD  184 (302)
T ss_pred             ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEc-----CCCeEEECC
Confidence            9999999999999999996543 3479999999999999999999998   999999999999998     778999999


Q ss_pred             cCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHH
Q 047157          640 FGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWV  717 (788)
Q Consensus       640 fg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~  717 (788)
                      ||++......... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+.       ...  
T Consensus       185 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~-------~~~--  255 (302)
T cd05055         185 FGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK-------FYK--  255 (302)
T ss_pred             CcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH-------HHH--
Confidence            9999866443221 1222345678999999998899999999999999999998 9999864322110       000  


Q ss_pred             HHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       718 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                        ....+ ..        ........+++.+++.+||+.+|++|||+.|+++.|+++
T Consensus       256 --~~~~~-~~--------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         256 --LIKEG-YR--------MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             --HHHcC-Cc--------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence              01111 00        000111245788999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=2.6e-35  Score=318.69  Aligned_cols=252  Identities=24%  Similarity=0.354  Sum_probs=196.5

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEEecC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      ++||+|+||.||++...  .++..||+|.++...   ....+.+..|..++.++ +||||+++++++.+.+..++||||+
T Consensus         1 ~~lG~G~~g~V~~~~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~   78 (329)
T cd05588           1 RVIGRGSYAKVLLVELK--KTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFV   78 (329)
T ss_pred             CeEeeCCCeEEEEEEEC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCC
Confidence            46899999999999886  667799999997542   23345678899999888 7999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++......
T Consensus        79 ~~g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~-----~~~~~kL~Dfg~~~~~~~~  149 (329)
T cd05588          79 SGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLD-----AEGHIKLTDYGMCKEGIRP  149 (329)
T ss_pred             CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEC-----CCCCEEECcCccccccccC
Confidence            999999888544 5789999999999999999999999   999999999999998     7889999999998753221


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      . .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+...   ....++..........   
T Consensus       150 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~---~~~~~~~~~~~~~~~~---  222 (329)
T cd05588         150 G-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPD---QNTEDYLFQVILEKQI---  222 (329)
T ss_pred             C-CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccccccccc---ccchHHHHHHHHcCCC---
Confidence            1 12233578999999999999999999999999999999999999997432221100   0111122222222111   


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC------HHHHHHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS------MKKVIHM  770 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt------~~evl~~  770 (788)
                           ..  +......+.+++.+||+.||.+||+      +++++++
T Consensus       223 -----~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05588         223 -----RI--PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH  262 (329)
T ss_pred             -----CC--CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence                 11  0112346788999999999999997      6777653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.5e-35  Score=306.28  Aligned_cols=251  Identities=29%  Similarity=0.433  Sum_probs=198.7

Q ss_pred             ccccccccceEEEEEEeccC-cceeeeeeecccchH-HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKDIE-KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPN  571 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~  571 (788)
                      ++||+|+||.||+|...... ....+++|.+..... ...+++.+|++++++++||||+++++++. .+..++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            47999999999999876433 447899999875443 35668999999999999999999999876 4568999999999


Q ss_pred             CCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCC
Q 047157          572 GTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT  651 (788)
Q Consensus       572 gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~  651 (788)
                      ++|.+++.... .+++..+..++.|++.||+|||..   +++|+||||+||+++     .++.+||+|||++........
T Consensus        80 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~-----~~~~~kl~df~~~~~~~~~~~  150 (257)
T cd05060          80 GPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLV-----NRHQAKISDFGMSRALGAGSD  150 (257)
T ss_pred             CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEc-----CCCcEEeccccccceeecCCc
Confidence            99999997654 789999999999999999999998   999999999999998     788999999999987644332


Q ss_pred             ccc--ccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          652 RTD--TNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       652 ~~~--~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      ...  ....++..|+|||.+.+..++.++||||||+++|||++ |..||......+        .....    ....  .
T Consensus       151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~--------~~~~~----~~~~--~  216 (257)
T cd05060         151 YYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE--------VIAML----ESGE--R  216 (257)
T ss_pred             ccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH--------HHHHH----HcCC--c
Confidence            211  11223567999999998899999999999999999998 999986532111        11111    1110  0


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                             ..........+.+++.+||+.+|++||++.+|++.|++..
T Consensus       217 -------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         217 -------LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             -------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence                   0011123457788999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=1.2e-35  Score=315.75  Aligned_cols=266  Identities=23%  Similarity=0.304  Sum_probs=191.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCC---CccccceEeeEEe-----c
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRT---HHKNLVRLLGFCS-----E  558 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l---~hpniv~~~~~~~-----~  558 (788)
                      .|.+.+.||+|+||.||+|.... .++..||+|.+....  ......+.+|+.+++.+   +||||+++++++.     .
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLK-NGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcC-CCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            36677899999999999998742 245689999886432  22234556677666654   7999999999885     3


Q ss_pred             CCeEEEEEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          559 EDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       559 ~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                      ....++||||++ ++|.+++... ...+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~-----~~~~~kl  151 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVT-----SSGQIKL  151 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEc-----CCCCEEE
Confidence            456899999996 6899988654 34578999999999999999999999   999999999999998     7889999


Q ss_pred             eecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh-----
Q 047157          638 SDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV-----  712 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~-----  712 (788)
                      +|||++......  .......+++.|+|||.+.+..++.++||||||+++|||++|+.||......+........     
T Consensus       152 ~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~  229 (290)
T cd07862         152 ADFGLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG  229 (290)
T ss_pred             ccccceEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCC
Confidence            999999865433  2223456899999999998889999999999999999999999999765332211100000     


Q ss_pred             hHHHHHHHhhcccccccccCCCCCcc---cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          713 LSDWVISCMLSRNLQVLVSHDPEVLS---DLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       713 ~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ...|......   .............   .....+.+.+++.+||+.||++|||+.|+++
T Consensus       230 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         230 EEDWPRDVAL---PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             hhhchhhhcc---cchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            0000000000   0000000000000   0112356678999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=3.6e-35  Score=310.19  Aligned_cols=262  Identities=26%  Similarity=0.423  Sum_probs=204.0

Q ss_pred             HHhhcccccccccccceEEEEEEeccCc--ceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDT--QIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      ...+.+.+.||+|+||+||+|.+...+.  ...||+|.+... .....+++.+|+.++..++||||+++++++.. ...+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~   84 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ   84 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence            3455667899999999999998763322  235899988643 34456788999999999999999999999875 4578


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +++||+++|+|.+++......+++..++.++.||+.||+|||++   +|+||||||+|||++     +++.+||+|||++
T Consensus        85 l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~-----~~~~~kL~dfG~~  156 (279)
T cd05109          85 LVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVK-----SPNHVKITDFGLA  156 (279)
T ss_pred             EEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEc-----CCCcEEECCCCce
Confidence            99999999999999977667789999999999999999999999   999999999999998     7778999999999


Q ss_pred             cccCCCCCcc-cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHh
Q 047157          644 KLLNKDQTRT-DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       644 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      +......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||.......        ....    .
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--------~~~~----~  224 (279)
T cd05109         157 RLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE--------IPDL----L  224 (279)
T ss_pred             eecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--------HHHH----H
Confidence            8765332211 112234678999999998899999999999999999998 888986432111        1111    1


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCCC
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVG  778 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~~  778 (788)
                      ....         ...........+.+++..||+.||++||++.++++.|+.+...+
T Consensus       225 ~~~~---------~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         225 EKGE---------RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             HCCC---------cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence            1110         00011123456788999999999999999999999998775544

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=4e-35  Score=308.53  Aligned_cols=255  Identities=26%  Similarity=0.437  Sum_probs=199.8

Q ss_pred             cccccccccccceEEEEEEeccC-cceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCe------
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDK------  561 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~------  561 (788)
                      .+.+.||+|+||.||+|....+. ....||+|+++...  ....+.+.+|++.++.++||||+++++++.+.+.      
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   81 (273)
T cd05035           2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK   81 (273)
T ss_pred             ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence            45688999999999999886332 34689999886432  3445688999999999999999999998866554      


Q ss_pred             EEEEEecCCCCCHhHhhhcc-----CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEE
Q 047157          562 RLLVYELMPNGTLSNFLFHE-----GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAK  636 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~k  636 (788)
                      .++|+||+++++|..++...     ...+++..+..++.|++.||.|||+.   +|+||||||+||+++     +++.+|
T Consensus        82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~-----~~~~~k  153 (273)
T cd05035          82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLR-----EDMTVC  153 (273)
T ss_pred             cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEEC-----CCCeEE
Confidence            79999999999999998542     24578999999999999999999998   999999999999998     778999


Q ss_pred             EeecCCccccCCCCCcc-cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhH
Q 047157          637 ISDFGISKLLNKDQTRT-DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLS  714 (788)
Q Consensus       637 L~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~  714 (788)
                      |+|||+++......... ......+..|+|||.+.+..++.++||||||+++|||++ |..||......+        ..
T Consensus       154 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~--------~~  225 (273)
T cd05035         154 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE--------IY  225 (273)
T ss_pred             ECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH--------HH
Confidence            99999998664432221 112234678999999988899999999999999999999 888886432111        11


Q ss_pred             HHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          715 DWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       715 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      +    ....+...         .........+.+++.+||+.||++|||+.||++.|+++
T Consensus       226 ~----~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         226 D----YLRHGNRL---------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             H----HHHcCCCC---------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            1    11111100         11122356788999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=2.5e-35  Score=307.97  Aligned_cols=255  Identities=25%  Similarity=0.426  Sum_probs=203.5

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      +...++.+.++||+|+||.||+|...   .+..+|+|.+..... ..+.+.+|+.++++++||||+++++++. .+..++
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~---~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~   77 (260)
T cd05067           3 VPRETLKLVKKLGAGQFGEVWMGYYN---GHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYI   77 (260)
T ss_pred             cchHHceeeeeeccCccceEEeeecC---CCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEE
Confidence            45677888999999999999999864   456899998875432 3467889999999999999999999874 467899


Q ss_pred             EEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          565 VYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +|||+++++|.+++... +..+++.++..++.|++.||+|||+.   +++|+||||+||+++     .++.++|+|||++
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~-----~~~~~~l~dfg~~  149 (260)
T cd05067          78 ITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVS-----ETLCCKIADFGLA  149 (260)
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEc-----CCCCEEEccCcce
Confidence            99999999999998654 45678999999999999999999998   999999999999998     7889999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ...............++..|+|||.+....++.++||||||+++|||++ |+.||......+.        ..    ...
T Consensus       150 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--------~~----~~~  217 (260)
T cd05067         150 RLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEV--------IQ----NLE  217 (260)
T ss_pred             eecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHH--------HH----HHH
Confidence            8765333222223445678999999998899999999999999999999 9999965422110        00    010


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                      .. .        ..........++.+++.+||+.+|++||+++++++.|+.
T Consensus       218 ~~-~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         218 RG-Y--------RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             cC-C--------CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            00 0        000111224578899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=3.4e-35  Score=309.07  Aligned_cols=254  Identities=26%  Similarity=0.388  Sum_probs=197.0

Q ss_pred             ccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecC------CeEE
Q 047157          492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE------DKRL  563 (788)
Q Consensus       492 ~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------~~~~  563 (788)
                      +.++||+|+||.||+|..........+|+|.++..  .....+.+.+|++++++++||||+++++++...      ...+
T Consensus         3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   82 (272)
T cd05075           3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV   82 (272)
T ss_pred             cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence            56889999999999999864443347899987643  244567889999999999999999999987432      2568


Q ss_pred             EEEecCCCCCHhHhhhc-----cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEe
Q 047157          564 LVYELMPNGTLSNFLFH-----EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS  638 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~-----~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~  638 (788)
                      +++||+++++|.+++..     ....+++.....++.||+.||+|||++   +|+||||||+|||++     .++.+||+
T Consensus        83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~-----~~~~~kl~  154 (272)
T cd05075          83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLN-----ENMNVCVA  154 (272)
T ss_pred             EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEc-----CCCCEEEC
Confidence            99999999999998742     224478999999999999999999998   999999999999998     78899999


Q ss_pred             ecCCccccCCCCCcc-cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHH
Q 047157          639 DFGISKLLNKDQTRT-DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDW  716 (788)
Q Consensus       639 Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~  716 (788)
                      |||++.......... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+            
T Consensus       155 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------------  222 (272)
T cd05075         155 DFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE------------  222 (272)
T ss_pred             CCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH------------
Confidence            999998764332211 122345678999999999999999999999999999999 788886432111            


Q ss_pred             HHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          717 VISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       717 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      .......+....         ........+.+++.+||+.||++|||+.++++.|+++
T Consensus       223 ~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         223 IYDYLRQGNRLK---------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             HHHHHHcCCCCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            111111111100         0112345678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-35  Score=312.41  Aligned_cols=252  Identities=26%  Similarity=0.311  Sum_probs=200.2

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      +|...++||+|+||+||++...  .++..||+|.+....   ......+.+|++++++++||||+++++.+..++..++|
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   78 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVR--ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV   78 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEc--CCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEE
Confidence            3556789999999999999876  567799999986532   22335678899999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          566 YELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |||+++++|.+++... ...+++..+..++.|++.||.|||+.   +|+||||||+||+++     +++.++|+|||++.
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~-----~~~~~~l~Dfg~~~  150 (285)
T cd05605          79 LTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLD-----DYGHIRISDLGLAV  150 (285)
T ss_pred             EeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEEC-----CCCCEEEeeCCCce
Confidence            9999999999988654 34689999999999999999999999   999999999999998     77899999999988


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .......  .....|+..|+|||.+.+..++.++||||+|+++|||++|+.||..........       . ........
T Consensus       151 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~-------~-~~~~~~~~  220 (285)
T cd05605         151 EIPEGET--IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKRE-------E-VERRVKED  220 (285)
T ss_pred             ecCCCCc--cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHH-------H-HHHHhhhc
Confidence            6543222  123468899999999998899999999999999999999999997543211100       0 00000000


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIHM  770 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~  770 (788)
                              ..  .........+.+++..||+.||++||     ++++++++
T Consensus       221 --------~~--~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         221 --------QE--EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             --------cc--ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence                    00  01122345678899999999999999     88899764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=3.9e-35  Score=307.69  Aligned_cols=257  Identities=21%  Similarity=0.334  Sum_probs=204.4

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeeccc---chHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK---DIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~---~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.++||+|+||.||+|...  .++..|+||.+..   ........+.+|+++++.++||||+++++++.+.+..++|
T Consensus         3 ~~~i~~~l~~g~~~~v~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   80 (267)
T cd08228           3 NFQIEKKIGRGQFSEVYRATCL--LDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIV   80 (267)
T ss_pred             ceeeeeeeccCCCeeEEEEEEe--CCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEE
Confidence            3567789999999999999886  5667899997753   2234456789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          566 YELMPNGTLSNFLFH---EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      +||+++++|.+++..   ....++...+..++.||+.||.|||++   +++|+||||+||+++     .++.++|+|||+
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~-----~~~~~~l~d~g~  152 (267)
T cd08228          81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFIT-----ATGVVKLGDLGL  152 (267)
T ss_pred             EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEc-----CCCCEEECcccc
Confidence            999999999988853   234578899999999999999999999   999999999999998     778899999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      +......... .....++..|+|||.+.+..++.++||||||+++|||++|+.||.......         ..+. ....
T Consensus       153 ~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~---------~~~~-~~~~  221 (267)
T cd08228         153 GRFFSSKTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL---------FSLC-QKIE  221 (267)
T ss_pred             ceeccchhHH-HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccH---------HHHH-HHHh
Confidence            8876433221 123467889999999988889999999999999999999999986432110         0111 1111


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      ....       +. .........+.+++.+||+.+|++||++++|++.|+++
T Consensus       222 ~~~~-------~~-~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         222 QCDY-------PP-LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             cCCC-------CC-CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            1000       00 11123446788999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=7.3e-36  Score=296.31  Aligned_cols=265  Identities=22%  Similarity=0.234  Sum_probs=200.6

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccchHH--HHHHHHHHHHHhcCCCccccceEeeEEec--CCeEEEEEec
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK--TNEEFMTELKIIGRTHHKNLVRLLGFCSE--EDKRLLVYEL  568 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~lV~e~  568 (788)
                      ...|++|.||.||+|+++  .+...||+|+++-+.+.  .--.-++|+.+|.+++|||||.+-.+...  -+.+||||||
T Consensus        81 lnrI~EGtyGiVYRakdk--~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~  158 (419)
T KOG0663|consen   81 LNRIEEGTYGVVYRAKDK--KTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEY  158 (419)
T ss_pred             HhhcccCcceeEEEeccC--CcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHH
Confidence            467999999999999887  77889999999754321  11245799999999999999999988754  4579999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      |+. +|..++....+++...++..++.|+++||+|||.+   .|+|||||++|+|+.     ..+.+||+|||+|+.++.
T Consensus       159 ~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~-----~~G~lKiaDFGLAR~ygs  229 (419)
T KOG0663|consen  159 VEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLS-----HKGILKIADFGLAREYGS  229 (419)
T ss_pred             HHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeec-----cCCcEEecccchhhhhcC
Confidence            965 89999988888999999999999999999999999   999999999999998     888999999999998876


Q ss_pred             CCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHH---HHHHhhcc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDW---VISCMLSR  724 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  724 (788)
                      .. ...+..+-|..|+|||.+.+. .|+.+.|+||+|||+.||+++++.|.+....++...+...+...   .|+.+..-
T Consensus       230 p~-k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~l  308 (419)
T KOG0663|consen  230 PL-KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSEL  308 (419)
T ss_pred             Cc-ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcccc
Confidence            53 234556779999999998764 69999999999999999999999998775544332221111100   11100000


Q ss_pred             cccccccCCCCCcc-----cH---HHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 NLQVLVSHDPEVLS-----DL---ERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 ~~~~l~~~~~~~~~-----~~---~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .....+. .+....     ..   ...+.-.+|+..+|..||.+|.|++|.+++
T Consensus       309 p~~k~~~-f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h  361 (419)
T KOG0663|consen  309 PAVKKMT-FSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH  361 (419)
T ss_pred             chhhccc-cCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence            0000000 000000     00   123566788889999999999999998864

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=2.2e-35  Score=323.81  Aligned_cols=200  Identities=25%  Similarity=0.312  Sum_probs=173.0

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      +.+.+.||+|+||+||++...  .++..||+|.+.+..   ......+.+|+.++.+++||||+++++.+.+....++||
T Consensus         3 y~~~~~LG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           3 FESLKVIGRGAFGEVRLVQKK--DTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             ceEeEEEEeCCCEEEEEEEEC--CCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            456789999999999999876  667799999987542   233457888999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++|+|.+++.+. ..+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||++..+
T Consensus        81 E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~-----~~~~vkL~DFGla~~~  151 (363)
T cd05628          81 EFLPGGDMMTLLMKK-DTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLD-----SKGHVKLSDFGLCTGL  151 (363)
T ss_pred             cCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEEC-----CCCCEEEeeccCcccc
Confidence            999999999999654 5688999999999999999999999   999999999999998     7789999999998754


Q ss_pred             CCCCC----------------------------------cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh
Q 047157          647 NKDQT----------------------------------RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC  692 (788)
Q Consensus       647 ~~~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt  692 (788)
                      .....                                  .......||+.|+|||++.+..++.++|||||||++|||++
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~  231 (363)
T cd05628         152 KKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI  231 (363)
T ss_pred             cccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHh
Confidence            32110                                  00123479999999999999999999999999999999999


Q ss_pred             CCCCCCcc
Q 047157          693 GRRHIELS  700 (788)
Q Consensus       693 g~~p~~~~  700 (788)
                      |+.||...
T Consensus       232 G~~Pf~~~  239 (363)
T cd05628         232 GYPPFCSE  239 (363)
T ss_pred             CCCCCCCC
Confidence            99999754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-35  Score=326.21  Aligned_cols=251  Identities=22%  Similarity=0.255  Sum_probs=197.6

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      |.+.+.||+|+||+||++...  .++..||||.+....   ....+.+.+|++++..++||||+++++++.+.+..++||
T Consensus         3 y~~~~~lG~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           3 FESIKVIGRGAFGEVRLVQKK--DTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             ceEEEEEEecCCEEEEEEEEC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            556789999999999999886  567799999997532   234456889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++|+|.+++... ..+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||++..+
T Consensus        81 E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~-----~~~~~kl~Dfg~~~~~  151 (364)
T cd05599          81 EYLPGGDMMTLLMKK-DTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLD-----AKGHIKLSDFGLCTGL  151 (364)
T ss_pred             CCCCCcHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEEC-----CCCCEEEeecccceec
Confidence            999999999999654 4688999999999999999999999   999999999999998     7889999999998754


Q ss_pred             CCCCCc-------------------------------------ccccccCCccccCcccccCCCCCccCcchhhHHHHHH
Q 047157          647 NKDQTR-------------------------------------TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLE  689 (788)
Q Consensus       647 ~~~~~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~e  689 (788)
                      ......                                     ......||+.|+|||++....++.++|||||||++||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e  231 (364)
T cd05599         152 KKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYE  231 (364)
T ss_pred             cccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHH
Confidence            321100                                     0112458999999999999999999999999999999


Q ss_pred             HHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC---HHH
Q 047157          690 IICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS---MKK  766 (788)
Q Consensus       690 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt---~~e  766 (788)
                      |++|..||......+..            ......  ..    ...........+.+.+++.+|+. +|.+|++   ++|
T Consensus       232 l~~G~~Pf~~~~~~~~~------------~~i~~~--~~----~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~  292 (364)
T cd05599         232 MLVGYPPFCSDNPQETY------------RKIINW--KE----TLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNE  292 (364)
T ss_pred             hhcCCCCCCCCCHHHHH------------HHHHcC--CC----ccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHH
Confidence            99999999754321110            000000  00    00111111223466778888886 9999998   998


Q ss_pred             HHHH
Q 047157          767 VIHM  770 (788)
Q Consensus       767 vl~~  770 (788)
                      ++++
T Consensus       293 ll~h  296 (364)
T cd05599         293 IKSH  296 (364)
T ss_pred             HhcC
Confidence            8774

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=6.9e-36  Score=314.86  Aligned_cols=269  Identities=27%  Similarity=0.411  Sum_probs=211.9

Q ss_pred             CHHHHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHH-HHHHHHHHHHHhcCCCccccceEeeEEecC
Q 047157          481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK-TNEEFMTELKIIGRTHHKNLVRLLGFCSEE  559 (788)
Q Consensus       481 ~~~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  559 (788)
                      ..+|+.+..-.|.++||+|.||.|.++...   ....||||.++..... ..++|.+|+++|.+++||||++++|+|..+
T Consensus       531 al~EfPRs~L~~~ekiGeGqFGEVhLCeve---g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~D  607 (807)
T KOG1094|consen  531 ALVEFPRSRLRFKEKIGEGQFGEVHLCEVE---GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQD  607 (807)
T ss_pred             chhhcchhheehhhhhcCcccceeEEEEec---CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecC
Confidence            344555555667899999999999999884   5789999999876544 458999999999999999999999999999


Q ss_pred             CeEEEEEecCCCCCHhHhhhccCCC-CCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEe
Q 047157          560 DKRLLVYELMPNGTLSNFLFHEGQR-PGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS  638 (788)
Q Consensus       560 ~~~~lV~e~~~~gsL~~~l~~~~~~-~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~  638 (788)
                      +.+++|+|||++|+|.+++.++... ..-.....|+.||+.|++||.+.   ++|||||.++|+|++     .++++||+
T Consensus       608 ePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~-----~e~~iKia  679 (807)
T KOG1094|consen  608 DPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVD-----GEFTIKIA  679 (807)
T ss_pred             CchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeec-----CcccEEec
Confidence            9999999999999999999766333 35556678999999999999999   999999999999999     99999999


Q ss_pred             ecCCccccCC-CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHH--hCCCCCCccccccccccchhhhHH
Q 047157          639 DFGISKLLNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII--CGRRHIELSRVEEESEEVDIVLSD  715 (788)
Q Consensus       639 Dfg~a~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ell--tg~~p~~~~~~~~~~~~~~~~~~~  715 (788)
                      |||+++.+-. +........+-..+|||||.+..++++.++|||+||+++||++  +...||.....+...        +
T Consensus       680 dfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vv--------e  751 (807)
T KOG1094|consen  680 DFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVV--------E  751 (807)
T ss_pred             CcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHH--------H
Confidence            9999995533 3333333455678999999999999999999999999999986  566787644222111        1


Q ss_pred             HHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          716 WVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       716 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      -..........+..+      ..+.-....+.+++++||..|-++||+++++...|++.
T Consensus       752 n~~~~~~~~~~~~~l------~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  752 NAGEFFRDQGRQVVL------SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             hhhhhcCCCCcceec------cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            111111111111111      12234456778999999999999999999999998764

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=5.3e-35  Score=304.87  Aligned_cols=250  Identities=27%  Similarity=0.386  Sum_probs=201.2

Q ss_pred             ccccccccceEEEEEEec-cCcceeeeeeecccchH-HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCC
Q 047157          494 KLVGTGSSGKVYRGILRL-KDTQIEIAVKKLEKDIE-KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPN  571 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~  571 (788)
                      ++||+|++|.||+|.+.. ......||+|.+..... ...+.+.+|++++++++||||+++++++.+ ...++|+||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            468999999999999864 23344799999987655 667789999999999999999999999988 899999999999


Q ss_pred             CCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCC
Q 047157          572 GTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ  650 (788)
Q Consensus       572 gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~  650 (788)
                      ++|.+++.+.. ..+++..++.++.|++.||.|||++   +++|+||||+||+++     .++.+||+|||++.......
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~-----~~~~~kl~dfg~~~~~~~~~  151 (257)
T cd05040          80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLA-----SDDKVKIGDFGLMRALPQNE  151 (257)
T ss_pred             CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEe-----cCCEEEeccccccccccccc
Confidence            99999997654 5689999999999999999999999   999999999999998     77899999999998764422


Q ss_pred             Cc--ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          651 TR--TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       651 ~~--~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      ..  ......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+..        ...   ....  .
T Consensus       152 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~--------~~~---~~~~--~  218 (257)
T cd05040         152 DHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQIL--------KKI---DKEG--E  218 (257)
T ss_pred             cceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHH--------HHH---HhcC--C
Confidence            11  1122456788999999998899999999999999999998 99998643221110        000   0000  0


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                             ........+..+.+++.+||+.+|++||++.+|++.|.
T Consensus       219 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         219 -------RLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             -------cCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence                   00011123467888999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.3e-35  Score=310.48  Aligned_cols=266  Identities=26%  Similarity=0.371  Sum_probs=201.6

Q ss_pred             HHHhhcccccccccccceEEEEEEecc------------Ccceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceE
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRLK------------DTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRL  552 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~~------------~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~  552 (788)
                      ....+.+.+.||+|+||.||++.....            .....||+|.+... .......+.+|++++++++||||+++
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~   82 (295)
T cd05097           3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRL   82 (295)
T ss_pred             chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence            345677889999999999999876421            22346899998654 23445679999999999999999999


Q ss_pred             eeEEecCCeEEEEEecCCCCCHhHhhhccC-----------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCc
Q 047157          553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEG-----------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQN  621 (788)
Q Consensus       553 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-----------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~N  621 (788)
                      ++++...+..++||||+++++|.+++....           ..+++..++.++.|++.||.|||++   +++|+||||+|
T Consensus        83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~N  159 (295)
T cd05097          83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRN  159 (295)
T ss_pred             EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhh
Confidence            999999999999999999999999985432           2357889999999999999999999   99999999999


Q ss_pred             EEeccCCCCCCCcEEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh--CCCCCC
Q 047157          622 VLLDLKTLDTNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC--GRRHIE  698 (788)
Q Consensus       622 Ill~~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt--g~~p~~  698 (788)
                      |+++     .++.+||+|||++........ .......++..|+|||.+.+..++.++||||||+++|||++  +..||.
T Consensus       160 ill~-----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~  234 (295)
T cd05097         160 CLVG-----NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYS  234 (295)
T ss_pred             EEEc-----CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCc
Confidence            9998     777899999999976533221 11122345678999999988899999999999999999998  556775


Q ss_pred             ccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          699 LSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       699 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                      .....+...        ................      ........+.+++.+||+.||++|||+.+|++.|+.
T Consensus       235 ~~~~~~~~~--------~~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~  295 (295)
T cd05097         235 LLSDEQVIE--------NTGEFFRNQGRQIYLS------QTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE  295 (295)
T ss_pred             ccChHHHHH--------HHHHhhhhccccccCC------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence            432211100        0000011100000000      011124578999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=4.1e-35  Score=306.72  Aligned_cols=248  Identities=23%  Similarity=0.410  Sum_probs=193.0

Q ss_pred             ccccccccceEEEEEEecc----------CcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          494 KLVGTGSSGKVYRGILRLK----------DTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~----------~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      +.||+|+||.||+|....+          .....|++|.+..........+.+|+.+++.++||||+++++++......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            4689999999999986422          123468999887665666678899999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCC--CCCcEEEeecC
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD--TNYMAKISDFG  641 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~--~~~~~kL~Dfg  641 (788)
                      +||||+++++|..++......+++..++.++.||++||+|||++   +|+||||||+|||++.....  ....++++|||
T Consensus        81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g  157 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSDPG  157 (262)
T ss_pred             EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence            99999999999999876666789999999999999999999999   99999999999999743211  12248999999


Q ss_pred             CccccCCCCCcccccccCCccccCccccc-CCCCCccCcchhhHHHHHHHH-hCCCCCCccccccccccchhhhHHHHHH
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLR-NVPVTTKVDVFSFGVMLLEII-CGRRHIELSRVEEESEEVDIVLSDWVIS  719 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~k~DVwSlGvil~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~  719 (788)
                      ++......     ....++..|+|||.+. +..++.++||||||+++|||+ +|+.|+......+.             .
T Consensus       158 ~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-------------~  219 (262)
T cd05077         158 IPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK-------------E  219 (262)
T ss_pred             CCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH-------------H
Confidence            98755322     1235678899999886 567899999999999999998 57777754321110             0


Q ss_pred             HhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          720 CMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       720 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                      ........ .         .......+.+++.+||+.||.+||++.+|++.|+
T Consensus       220 ~~~~~~~~-~---------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         220 RFYEGQCM-L---------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             HHHhcCcc-C---------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence            00011000 0         0012356788999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=3.2e-35  Score=307.18  Aligned_cols=253  Identities=27%  Similarity=0.427  Sum_probs=199.8

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ...+.+.++||+|+||.||+|...   .+..+++|.+..... ..+.+.+|+.++++++|||++++++++. ....+++|
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~   79 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWN---GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVT   79 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEec---CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEE
Confidence            345677889999999999999774   445799998875432 3457899999999999999999999885 45689999


Q ss_pred             ecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+++++|.+++... ...+++..+..++.|++.||.|||+.   +|+|+||||+||+++     +++.++|+|||.+..
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~-----~~~~~~l~dfg~~~~  151 (260)
T cd05070          80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVG-----DGLVCKIADFGLARL  151 (260)
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEe-----CCceEEeCCceeeee
Confidence            999999999999654 34579999999999999999999999   999999999999998     778999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .............++..|+|||.+.+..++.++||||||+++|||++ |+.||......+        ..+    .....
T Consensus       152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--------~~~----~~~~~  219 (260)
T cd05070         152 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE--------VLE----QVERG  219 (260)
T ss_pred             ccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH--------HHH----HHHcC
Confidence            64433222222345668999999988899999999999999999999 888886432111        001    11100


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                               .....+......+.+++.+|++.+|++|||+.++.+.|+.
T Consensus       220 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         220 ---------YRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             ---------CCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence                     0001112234578899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.8e-35  Score=321.51  Aligned_cols=275  Identities=21%  Similarity=0.282  Sum_probs=197.5

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecC-----CeE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE-----DKR  562 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~~  562 (788)
                      |.+.++||+|+||.||+|...  .++..||||++....  ......+.+|++++++++||||+++++++...     ...
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   79 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDT--HTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI   79 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEEC--CCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence            566789999999999999876  667799999886432  23345788999999999999999999988543     357


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||+. ++|.+++... ..+++..+..++.||++||.|||++   +|+||||||+|||++     .++.+||+|||+
T Consensus        80 ~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~-----~~~~~kL~Dfg~  149 (338)
T cd07859          80 YVVFELME-SDLHQVIKAN-DDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILAN-----ADCKLKICDFGL  149 (338)
T ss_pred             EEEEecCC-CCHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEC-----CCCcEEEccCcc
Confidence            99999995 6898888544 4688999999999999999999999   999999999999998     788999999999


Q ss_pred             ccccCCCCC--cccccccCCccccCcccccC--CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh---hHH
Q 047157          643 SKLLNKDQT--RTDTNMRGTMGYVAPEWLRN--VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV---LSD  715 (788)
Q Consensus       643 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~---~~~  715 (788)
                      +........  .......+++.|+|||++.+  ..++.++|||||||++|||++|+.||...............   ...
T Consensus       150 ~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~  229 (338)
T cd07859         150 ARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSP  229 (338)
T ss_pred             ccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence            986532221  11234568999999999865  67899999999999999999999999754321110000000   000


Q ss_pred             HHHHHhhcccccc----cccCCCCCc--ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--hhcCcC
Q 047157          716 WVISCMLSRNLQV----LVSHDPEVL--SDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM--LEGTLE  776 (788)
Q Consensus       716 ~~~~~~~~~~~~~----l~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~~~~  776 (788)
                      .............    +....+...  ........+.+++.+||+.||++|||++|++++  +++...
T Consensus       230 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~  298 (338)
T cd07859         230 ETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK  298 (338)
T ss_pred             HHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence            0000000000000    000000000  000123457889999999999999999999964  444433

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=2.5e-35  Score=325.18  Aligned_cols=263  Identities=23%  Similarity=0.399  Sum_probs=203.4

Q ss_pred             HHHHhhcccccccccccceEEEEEEec---cCcceeeeeeecccch-HHHHHHHHHHHHHhcCCC-ccccceEeeEEecC
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEE  559 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~  559 (788)
                      +....+.+.++||+|+||.||+|.+..   ...+..||+|++.... ....+.+.+|++++.++. ||||+++++++...
T Consensus        34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~  113 (401)
T cd05107          34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG  113 (401)
T ss_pred             ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence            444456667899999999999998752   2345689999997543 333457889999999997 99999999999999


Q ss_pred             CeEEEEEecCCCCCHhHhhhccC---------------------------------------------------------
Q 047157          560 DKRLLVYELMPNGTLSNFLFHEG---------------------------------------------------------  582 (788)
Q Consensus       560 ~~~~lV~e~~~~gsL~~~l~~~~---------------------------------------------------------  582 (788)
                      +..++|+||+++|+|.++++...                                                         
T Consensus       114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (401)
T cd05107         114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ  193 (401)
T ss_pred             CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence            99999999999999999996432                                                         


Q ss_pred             ----------------------------------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcE
Q 047157          583 ----------------------------------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNV  622 (788)
Q Consensus       583 ----------------------------------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  622 (788)
                                                              ..+++..+..++.||+.||.|||+.   +|+||||||+||
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~Ni  270 (401)
T cd05107         194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNV  270 (401)
T ss_pred             cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceE
Confidence                                                    1346677889999999999999998   999999999999


Q ss_pred             EeccCCCCCCCcEEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCcc
Q 047157          623 LLDLKTLDTNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELS  700 (788)
Q Consensus       623 ll~~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~  700 (788)
                      |++     .+..+||+|||++........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus       271 Ll~-----~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~  345 (401)
T cd05107         271 LIC-----EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPEL  345 (401)
T ss_pred             EEe-----CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCC
Confidence            998     778999999999986533221 11222356788999999998889999999999999999998 88898643


Q ss_pred             ccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          701 RVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       701 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ...+.           .......+ .      .+.  .+......+.+++..||+.+|++||+++||++.|+++.
T Consensus       346 ~~~~~-----------~~~~~~~~-~------~~~--~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         346 PMNEQ-----------FYNAIKRG-Y------RMA--KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             CchHH-----------HHHHHHcC-C------CCC--CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            21110           00111111 0      000  01112457888999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2.5e-35  Score=312.23  Aligned_cols=270  Identities=22%  Similarity=0.347  Sum_probs=205.2

Q ss_pred             HHhhcccccccccccceEEEEEEe--ccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecC--Ce
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILR--LKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE--DK  561 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~--~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~  561 (788)
                      +.++.+.+.||+|+||.||++...  ....+..|++|.+.... ....+.+.+|++++++++||||+++++++.+.  ..
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (284)
T cd05079           3 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG   82 (284)
T ss_pred             hhhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence            445667789999999999999754  23456789999986443 34456899999999999999999999998775  57


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      .++||||+++++|.+++.+....+++..+..++.||+.||+|||++   +|+||||||+||+++     .++.+||+|||
T Consensus        83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~-----~~~~~~l~dfg  154 (284)
T cd05079          83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVE-----SEHQVKIGDFG  154 (284)
T ss_pred             eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEc-----CCCCEEECCCc
Confidence            8999999999999999976656789999999999999999999999   999999999999998     77889999999


Q ss_pred             CccccCCCCCc--ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCcccccccc----ccchhhhHH
Q 047157          642 ISKLLNKDQTR--TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEES----EEVDIVLSD  715 (788)
Q Consensus       642 ~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~----~~~~~~~~~  715 (788)
                      ++.........  ......++..|+|||.+.+..++.++||||||+++|||++++.|..........    .........
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
T cd05079         155 LTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTR  234 (284)
T ss_pred             cccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHH
Confidence            99876433221  112345677899999998889999999999999999999987765322110000    000000000


Q ss_pred             HHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          716 WVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       716 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                       .........         ...........+.+++.+||+.||++|||++++++.|+.+
T Consensus       235 -~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         235 -LVRVLEEGK---------RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             -HHHHHHcCc---------cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence             011111110         0001112356788999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=1.8e-35  Score=318.06  Aligned_cols=241  Identities=27%  Similarity=0.331  Sum_probs=191.0

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcC-CCccccceEeeEEecCCeEEEEEecC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGR-THHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      ++||+|+||.||+|...  .++..||+|.++...   ....+.+..|..++.. ++||||+++++++.+.+..++||||+
T Consensus         1 ~~lg~G~~g~V~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~   78 (316)
T cd05620           1 KVLGKGSFGKVLLAELK--GKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFL   78 (316)
T ss_pred             CeeeeCCCeEEEEEEEC--CCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCC
Confidence            46999999999999886  667799999987543   2234566778888775 48999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|..++... ..+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||++......
T Consensus        79 ~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~-----~~~~~kl~Dfg~~~~~~~~  149 (316)
T cd05620          79 NGGDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLD-----RDGHIKIADFGMCKENVFG  149 (316)
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEC-----CCCCEEeCccCCCeecccC
Confidence            999999988654 5678899999999999999999999   999999999999998     7789999999998743221


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      . .......|++.|+|||++.+..++.++||||||+++|||++|+.||......+.            .......     
T Consensus       150 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~------------~~~~~~~-----  211 (316)
T cd05620         150 D-NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDEL------------FESIRVD-----  211 (316)
T ss_pred             C-CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH------------HHHHHhC-----
Confidence            1 122345689999999999999999999999999999999999999975432111            0111100     


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHH-HHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMK-KVI  768 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-evl  768 (788)
                         .+...  ......+.+++.+||+.||++||++. +++
T Consensus       212 ---~~~~~--~~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         212 ---TPHYP--RWITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             ---CCCCC--CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence               00000  01234677899999999999999984 665

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=3e-35  Score=308.63  Aligned_cols=256  Identities=21%  Similarity=0.259  Sum_probs=201.5

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ...|.+.+.||+|+||.||+|...  .++..|++|.+........+.+.+|+.++++++||||+++++.+...+..++|+
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~--~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~   85 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNL--HTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM   85 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEEC--CCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence            345677899999999999999876  567789999987554445567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++... ..+++..+..++.|++.||.|||+.   +|+||||||+||+++     .++.+||+|||++...
T Consensus        86 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~-----~~~~~~l~dfg~~~~~  156 (267)
T cd06646          86 EYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLT-----DNGDVKLADFGVAAKI  156 (267)
T ss_pred             eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEC-----CCCCEEECcCccceee
Confidence            999999999998644 4678999999999999999999998   999999999999998     7788999999999866


Q ss_pred             CCCCCcccccccCCccccCccccc---CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ..... ......++..|+|||.+.   ...++.++||||||+++|||++|+.||......+....            ...
T Consensus       157 ~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~------------~~~  223 (267)
T cd06646         157 TATIA-KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL------------MSK  223 (267)
T ss_pred             ccccc-ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhee------------eec
Confidence            43221 122346788999999874   44578899999999999999999999854321110000            000


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                      ....     .+...........+.+++.+||+.||++|||++++++.|
T Consensus       224 ~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         224 SNFQ-----PPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             CCCC-----CCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            0000     011111122346788999999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=3.4e-35  Score=314.43  Aligned_cols=265  Identities=28%  Similarity=0.413  Sum_probs=207.8

Q ss_pred             HHHHhhcccccccccccceEEEEEEec-----cCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEe
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRL-----KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCS  557 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~-----~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~  557 (788)
                      +....+.+.+.||+|+||.||++....     ......|++|.+.... ....+++.+|+.+++.+ +||||+++++++.
T Consensus        12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   91 (304)
T cd05101          12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT   91 (304)
T ss_pred             ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence            455667788999999999999997532     1234579999886543 34457889999999999 8999999999999


Q ss_pred             cCCeEEEEEecCCCCCHhHhhhccC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcE
Q 047157          558 EEDKRLLVYELMPNGTLSNFLFHEG---------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNV  622 (788)
Q Consensus       558 ~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  622 (788)
                      .....++||||+++++|.+++....               ..+++.++..++.||+.||.|||++   +|+||||||+||
T Consensus        92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni  168 (304)
T cd05101          92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNV  168 (304)
T ss_pred             cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceE
Confidence            9999999999999999999996532               3467888999999999999999999   999999999999


Q ss_pred             EeccCCCCCCCcEEEeecCCccccCCCCCcc-cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCcc
Q 047157          623 LLDLKTLDTNYMAKISDFGISKLLNKDQTRT-DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELS  700 (788)
Q Consensus       623 ll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~  700 (788)
                      +++     .++.+||+|||.+.......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus       169 li~-----~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~  243 (304)
T cd05101         169 LVT-----ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI  243 (304)
T ss_pred             EEc-----CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence            998     77899999999998764432221 222345678999999988899999999999999999998 77887543


Q ss_pred             ccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCCC
Q 047157          701 RVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVG  778 (788)
Q Consensus       701 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~~  778 (788)
                      ...+.            .........         ..........+.+++.+||+.+|++|||+.||++.|+++....
T Consensus       244 ~~~~~------------~~~~~~~~~---------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~  300 (304)
T cd05101         244 PVEEL------------FKLLKEGHR---------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT  300 (304)
T ss_pred             CHHHH------------HHHHHcCCc---------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence            22111            111111110         0011123467888999999999999999999999999876553

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.9e-35  Score=299.63  Aligned_cols=265  Identities=26%  Similarity=0.315  Sum_probs=216.5

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .++.+.||+|.-|+||++.++  +.....|+|++.+..   .+...+...|-+||+.++||.++.+|+.++.++..++||
T Consensus        79 f~llk~LG~GdiG~VyL~~l~--~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   79 FRLLKRLGCGDIGTVYLVELR--GTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHcCCCCceeEEEEEec--CCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            345688999999999999987  666899999998764   334457788999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+||+|..+++++ ++.+++..+.-++..++-||+|||-.   |||.|||||+||||.     +++++.|+||.++..
T Consensus       157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvr-----edGHIMLsDFDLS~~  228 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVR-----EDGHIMLSDFDLSLR  228 (459)
T ss_pred             ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEe-----cCCcEEeeecccccc
Confidence            999999999998765 56789999999999999999999999   999999999999998     999999999998764


Q ss_pred             cCC---------------------------------CCC----------------------cccccccCCccccCccccc
Q 047157          646 LNK---------------------------------DQT----------------------RTDTNMRGTMGYVAPEWLR  670 (788)
Q Consensus       646 ~~~---------------------------------~~~----------------------~~~~~~~gt~~y~aPE~~~  670 (788)
                      ...                                 ...                      .....++||-.|+|||++.
T Consensus       229 ~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~  308 (459)
T KOG0610|consen  229 CPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIR  308 (459)
T ss_pred             CCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeee
Confidence            310                                 000                      0011356999999999999


Q ss_pred             CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHH
Q 047157          671 NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVG  750 (788)
Q Consensus       671 ~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~  750 (788)
                      +...+.++|.|+|||+||||+.|+.||.+....+.                    +..++...+......+....+.+||
T Consensus       309 G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~T--------------------l~NIv~~~l~Fp~~~~vs~~akDLI  368 (459)
T KOG0610|consen  309 GEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKET--------------------LRNIVGQPLKFPEEPEVSSAAKDLI  368 (459)
T ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhh--------------------HHHHhcCCCcCCCCCcchhHHHHHH
Confidence            99999999999999999999999999988754332                    2233444455555556677888999


Q ss_pred             hHccCCCCCCCCC----HHHHHHH--hhcC----cCCCCCCCCC
Q 047157          751 LWCNHPDPNLRPS----MKKVIHM--LEGT----LEVGMPPLLH  784 (788)
Q Consensus       751 ~~cl~~dP~~RPt----~~evl~~--L~~~----~~~~~pp~p~  784 (788)
                      +..|..||++|.-    +.||.++  ++++    .....||..|
T Consensus       369 r~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~iP  412 (459)
T KOG0610|consen  369 RKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPPEIP  412 (459)
T ss_pred             HHHhccChhhhhccccchHHhhcCccccCCChhheeccCCCcCC
Confidence            9999999999998    8888763  4544    3445666543

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=3.6e-35  Score=309.29  Aligned_cols=247  Identities=23%  Similarity=0.394  Sum_probs=192.4

Q ss_pred             cccccccceEEEEEEec----------------------cCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceE
Q 047157          495 LVGTGSSGKVYRGILRL----------------------KDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL  552 (788)
Q Consensus       495 ~lg~G~~g~Vy~~~~~~----------------------~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~  552 (788)
                      .||+|+||.||+|.+..                      ......|++|.+.........++.+|+.++++++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            58999999999998642                      12234689999876555556788899999999999999999


Q ss_pred             eeEEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCC--C
Q 047157          553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL--D  630 (788)
Q Consensus       553 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~--~  630 (788)
                      ++++.+....++||||+++++|..++......+++..+..++.||++||+|||++   +|+||||||+|||++....  .
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~~~~  158 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGLAEG  158 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCcccC
Confidence            9999999999999999999999999977667789999999999999999999998   9999999999999974321  1


Q ss_pred             CCCcEEEeecCCccccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHH-hCCCCCCcccccccccc
Q 047157          631 TNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEII-CGRRHIELSRVEEESEE  708 (788)
Q Consensus       631 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~ell-tg~~p~~~~~~~~~~~~  708 (788)
                      ....+|++|||.+......     ....++..|+|||.+.+ ..++.++||||||+++|||+ +|+.||......+.   
T Consensus       159 ~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~---  230 (274)
T cd05076         159 TSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK---  230 (274)
T ss_pred             ccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH---
Confidence            2335899999987643221     12346788999998865 56899999999999999995 78888865422110   


Q ss_pred             chhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          709 VDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       709 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                           .... .    .        ......  .....+.+++.+||+.+|++|||+.+|++.|.
T Consensus       231 -----~~~~-~----~--------~~~~~~--~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         231 -----ERFY-E----K--------KHRLPE--PSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             -----HHHH-H----h--------ccCCCC--CCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence                 0000 0    0        000000  11235788999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=6.6e-35  Score=308.66  Aligned_cols=252  Identities=22%  Similarity=0.303  Sum_probs=201.8

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      |.+.+.||+|+||.||+|...  .++..+++|.+........+.+.+|+++++.++||||+++++++..++..++|+||+
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~   84 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNK--ETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   84 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEEC--CCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence            556788999999999999886  667789999987665666778899999999999999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|..++......+++..+..++.||+.||.|||+.   +|+||||||+||+++     .++.+||+|||++......
T Consensus        85 ~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~-----~~~~~kl~dfg~~~~~~~~  156 (282)
T cd06643          85 AGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFT-----LDGDIKLADFGVSAKNTRT  156 (282)
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEc-----cCCCEEEcccccccccccc
Confidence            99999998876666789999999999999999999999   999999999999998     7789999999998765332


Q ss_pred             CCcccccccCCccccCccccc-----CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLR-----NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .. ......++..|+|||.+.     +..++.++|||||||++|||++|+.||......+.           ...... .
T Consensus       157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-----------~~~~~~-~  223 (282)
T cd06643         157 IQ-RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV-----------LLKIAK-S  223 (282)
T ss_pred             cc-ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH-----------HHHHhh-c
Confidence            21 222356889999999973     45678899999999999999999999864321110           000000 0


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                      .       .+....+......+.+++.+||+.||.+||++.+++++-
T Consensus       224 ~-------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  263 (282)
T cd06643         224 E-------PPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHP  263 (282)
T ss_pred             C-------CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence            0       001111112345788999999999999999999998653

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=2.4e-35  Score=317.02  Aligned_cols=242  Identities=27%  Similarity=0.339  Sum_probs=191.4

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcC-CCccccceEeeEEecCCeEEEEEecC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGR-THHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      +.||+|+||.||+|...  .++..||+|.++...   ....+.+..|..++.. ++||||+++++++.+.+..++||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~   78 (316)
T cd05619           1 KMLGKGSFGKVFLAELK--GTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYL   78 (316)
T ss_pred             CeeeeCCCEEEEEEEEC--CCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCC
Confidence            46899999999999886  667789999987542   2334556778888875 48999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++|+|.+++... ..+++.++..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++......
T Consensus        79 ~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~-----~~~~~kl~Dfg~~~~~~~~  149 (316)
T cd05619          79 NGGDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLD-----TDGHIKIADFGMCKENMLG  149 (316)
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEEC-----CCCCEEEccCCcceECCCC
Confidence            999999998653 5678889999999999999999999   999999999999998     7789999999998753221


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      . .......||..|+|||++.+..++.++|||||||++|||++|+.||......+.        ..    .....     
T Consensus       150 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~--------~~----~i~~~-----  211 (316)
T cd05619         150 D-AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEEL--------FQ----SIRMD-----  211 (316)
T ss_pred             C-CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHH--------HH----HHHhC-----
Confidence            1 122335689999999999999999999999999999999999999975432111        00    00000     


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHH-HHHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMK-KVIH  769 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-evl~  769 (788)
                         .+..  +......+.+++.+||+.||++||++. ++++
T Consensus       212 ---~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         212 ---NPCY--PRWLTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             ---CCCC--CccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence               0000  111234677899999999999999997 6654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=5.9e-35  Score=306.30  Aligned_cols=257  Identities=21%  Similarity=0.330  Sum_probs=204.5

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc---hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD---IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|++|.||++...  .++..++||.+...   .....+++.+|+.+++.++||||+++++++.+++..+++
T Consensus         3 ~y~~~~~ig~g~~g~v~~~~~~--~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v   80 (267)
T cd08229           3 NFRIEKKIGRGQFSEVYRATCL--LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV   80 (267)
T ss_pred             hhhhhhhhcccCCeEEEEEeec--CCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEE
Confidence            3566789999999999999876  56678999987542   233456889999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          566 YELMPNGTLSNFLFH---EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      |||+++++|.+++..   ....+++..++.++.||+.||.|||++   +++|+||||+||+++     .++.++|+|||+
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~-----~~~~~~l~dfg~  152 (267)
T cd08229          81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFIT-----ATGVVKLGDLGL  152 (267)
T ss_pred             EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEc-----CCCCEEECcchh
Confidence            999999999998853   234678999999999999999999999   999999999999998     778999999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      +......... .....++..|+|||.+.+..++.++||||||+++|+|++|..||........         ... ....
T Consensus       153 ~~~~~~~~~~-~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---------~~~-~~~~  221 (267)
T cd08229         153 GRFFSSKTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY---------SLC-KKIE  221 (267)
T ss_pred             hhccccCCcc-cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH---------HHh-hhhh
Confidence            8766433221 2234678899999999988999999999999999999999999864321100         000 0000


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      ..        ...........+.+.+++.+||+.||++||||.+|+++++++
T Consensus       222 ~~--------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         222 QC--------DYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             cC--------CCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            00        000011123456788999999999999999999999999765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=2.1e-35  Score=317.95  Aligned_cols=243  Identities=29%  Similarity=0.344  Sum_probs=194.8

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEEecC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      +.||+|+||+||++...  .++..||+|.+.+..   ......+..|.+++..+ +||||+++++++.+.+..++||||+
T Consensus         1 ~~lG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   78 (318)
T cd05570           1 KVLGKGSFGKVLLAELK--GTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYV   78 (318)
T ss_pred             CeeeeCCCeEEEEEEEC--CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCC
Confidence            46899999999999886  567789999987543   23345677888888877 7999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|..++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++......
T Consensus        79 ~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~-----~~~~~kl~Dfg~~~~~~~~  149 (318)
T cd05570          79 NGGDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLD-----SEGHIKIADFGMCKEGILG  149 (318)
T ss_pred             CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEEC-----CCCcEEecccCCCeecCcC
Confidence            999999988654 4688999999999999999999999   999999999999998     7889999999998753222


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      .. ......|++.|+|||++.+..++.++|||||||++|||++|+.||........            ........    
T Consensus       150 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~------------~~~i~~~~----  212 (318)
T cd05570         150 GV-TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDEL------------FQSILEDE----  212 (318)
T ss_pred             CC-cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHH------------HHHHHcCC----
Confidence            11 12234689999999999999999999999999999999999999975432110            01111111    


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCH-----HHHHHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSM-----KKVIHM  770 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~~  770 (788)
                          ...  +......+.+++.+||+.||++||++     .++++.
T Consensus       213 ----~~~--~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         213 ----VRY--PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             ----CCC--CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence                000  11224567889999999999999999     888753

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=4.3e-35  Score=309.24  Aligned_cols=245  Identities=24%  Similarity=0.344  Sum_probs=192.2

Q ss_pred             ccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCC
Q 047157          496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       496 lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      ||+|+||.||++..+  .++..+|+|.+....   ....+.+..|++++++++||||+++++++.++...++||||++++
T Consensus         1 lg~G~~g~Vy~~~~~--~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~   78 (277)
T cd05607           1 LGKGGFGEVCAVQVK--NTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGG   78 (277)
T ss_pred             CCCCCceEEEEEEEc--cCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCC
Confidence            699999999999886  567799999886432   122345667999999999999999999999999999999999999


Q ss_pred             CHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCC
Q 047157          573 TLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT  651 (788)
Q Consensus       573 sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~  651 (788)
                      +|.+++.... ..+++..+..++.||+.||+|||+.   +|+||||||+||+++     .++.++|+|||++........
T Consensus        79 ~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~-----~~~~~~l~Dfg~~~~~~~~~~  150 (277)
T cd05607          79 DLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLD-----DQGNCRLSDLGLAVELKDGKT  150 (277)
T ss_pred             CHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEc-----CCCCEEEeeceeeeecCCCce
Confidence            9998886543 4578899999999999999999998   999999999999998     778999999999886643221


Q ss_pred             cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccccc
Q 047157          652 RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVS  731 (788)
Q Consensus       652 ~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  731 (788)
                        .....++..|+|||++.+..++.++|||||||++|||++|+.||........       ... ...........    
T Consensus       151 --~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~-------~~~-~~~~~~~~~~~----  216 (277)
T cd05607         151 --ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA-------KEE-LKRRTLEDEVK----  216 (277)
T ss_pred             --eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh-------HHH-HHHHhhccccc----
Confidence              2234688999999999988899999999999999999999999964321110       000 00111111100    


Q ss_pred             CCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          732 HDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       732 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                          . .......++.+++..||+.||++||+++|+++
T Consensus       217 ----~-~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~  249 (277)
T cd05607         217 ----F-EHQNFTEESKDICRLFLAKKPEDRLGSREKND  249 (277)
T ss_pred             ----c-ccccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence                0 00123456788999999999999999976553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=2.6e-35  Score=318.15  Aligned_cols=246  Identities=26%  Similarity=0.322  Sum_probs=194.8

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCc-cccceEeeEEecCCeEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHH-KNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~~lV  565 (788)
                      |.+.+.||+|+||.||+|...  .++..||+|.+....   ....+.+..|.+++..++| ++|+++++++.+.+..++|
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv   79 (324)
T cd05587           2 FNFLMVLGKGSFGKVMLAERK--GTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV   79 (324)
T ss_pred             ceEEEEEeeccCeEEEEEEEC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEE
Confidence            566789999999999999876  667789999987542   2345677889999998876 5688899999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++..
T Consensus        80 ~E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~-----~~~~~kL~Dfg~~~~  150 (324)
T cd05587          80 MEYVNGGDLMYHIQQV-GKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLD-----AEGHIKIADFGMCKE  150 (324)
T ss_pred             EcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEc-----CCCCEEEeecCccee
Confidence            9999999999998654 4678899999999999999999999   999999999999998     778999999999874


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ..... .......|++.|+|||++.+..++.++||||||+++|||++|+.||......+..            .......
T Consensus       151 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~------------~~i~~~~  217 (324)
T cd05587         151 NIFGG-KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELF------------QSIMEHN  217 (324)
T ss_pred             cCCCC-CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH------------HHHHcCC
Confidence            32211 1222356899999999999999999999999999999999999999754321110            0011110


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCH-----HHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSM-----KKVIH  769 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~  769 (788)
                              +..  +......+.+++.+||+.||++||+.     +++++
T Consensus       218 --------~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  256 (324)
T cd05587         218 --------VSY--PKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIRE  256 (324)
T ss_pred             --------CCC--CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence                    000  11124567889999999999999976     56654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=7.4e-35  Score=303.39  Aligned_cols=249  Identities=24%  Similarity=0.351  Sum_probs=203.0

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      |.+.+.||+|++|.||++...  .++..+++|.+...  .....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRK--ADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME   79 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEc--CCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence            456788999999999999886  56778999987642  24556789999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          568 LMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       568 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      |+++++|.+++... ...+++..++.++.|++.||.|||+.   +++|+||||+||+++     .++.++|+|||++...
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~-----~~~~~~l~df~~~~~~  151 (256)
T cd08529          80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLD-----AYDNVKIGDLGVAKLL  151 (256)
T ss_pred             eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEe-----CCCCEEEcccccceec
Confidence            99999999999764 56788999999999999999999998   999999999999998     7789999999998876


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      ...... .....+++.|+|||++.+..++.++||||||+++|||++|+.||.......        .    .........
T Consensus       152 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~----~~~~~~~~~  218 (256)
T cd08529         152 SDNTNF-ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA--------L----ILKIIRGVF  218 (256)
T ss_pred             cCccch-hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--------H----HHHHHcCCC
Confidence            543222 223467889999999999899999999999999999999999997543111        0    001111111


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ..         ........+.+++.+||+.+|++||++.++++.
T Consensus       219 ~~---------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         219 PP---------VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             CC---------CccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            10         011334678899999999999999999999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.9e-35  Score=308.67  Aligned_cols=260  Identities=25%  Similarity=0.430  Sum_probs=205.0

Q ss_pred             HHHHhhcccccccccccceEEEEEEecc---Ccceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCC
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLK---DTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED  560 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  560 (788)
                      +....+.+.+.||+|+||.||+|.....   ..+..|++|.+.... ......+.+|+.+++.++||||+++++++....
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~   82 (277)
T cd05032           3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ   82 (277)
T ss_pred             cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence            3445667789999999999999987631   234689999986543 344567889999999999999999999999999


Q ss_pred             eEEEEEecCCCCCHhHhhhccC---------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCC
Q 047157          561 KRLLVYELMPNGTLSNFLFHEG---------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDT  631 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~  631 (788)
                      ..++||||+++++|.+++....         ..+++..++.++.||+.||.|||+.   +|+|+||||+||+++     .
T Consensus        83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~-----~  154 (277)
T cd05032          83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVA-----E  154 (277)
T ss_pred             CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEc-----C
Confidence            9999999999999999986432         2467889999999999999999998   999999999999998     7


Q ss_pred             CCcEEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccc
Q 047157          632 NYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEV  709 (788)
Q Consensus       632 ~~~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~  709 (788)
                      ++.+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+     
T Consensus       155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-----  229 (277)
T cd05032         155 DLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE-----  229 (277)
T ss_pred             CCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH-----
Confidence            88999999999886543322 12223446788999999988889999999999999999998 888986432211     


Q ss_pred             hhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          710 DIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       710 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                         ...    ....+.....         +......+.+++.+||+.+|++|||+.++++.|++
T Consensus       230 ---~~~----~~~~~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (277)
T cd05032         230 ---VLK----FVIDGGHLDL---------PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD  277 (277)
T ss_pred             ---HHH----HHhcCCCCCC---------CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence               111    1111111110         11125678899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=4.7e-35  Score=311.12  Aligned_cols=258  Identities=26%  Similarity=0.399  Sum_probs=201.5

Q ss_pred             hcccccccccccceEEEEEEecc---Ccceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLK---DTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      +.+.+.||+|+||.||+|.....   .....+++|.+.... ....+++.+|+.+++.++||||+++++.+...+..++|
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI   81 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence            34568899999999999987521   223578888876543 33456789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhcc-----------------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcE
Q 047157          566 YELMPNGTLSNFLFHE-----------------------GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNV  622 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~-----------------------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  622 (788)
                      +||+++++|.+++...                       ...+++..++.++.|++.||.|||+.   +|+||||||+||
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~ni  158 (290)
T cd05045          82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARNV  158 (290)
T ss_pred             EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---CeehhhhhhheE
Confidence            9999999999998532                       13467889999999999999999998   999999999999


Q ss_pred             EeccCCCCCCCcEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCcc
Q 047157          623 LLDLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELS  700 (788)
Q Consensus       623 ll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~  700 (788)
                      |++     +++.+||+|||++......... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus       159 ll~-----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~  233 (290)
T cd05045         159 LVA-----EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI  233 (290)
T ss_pred             EEc-----CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC
Confidence            998     7789999999999865332221 1122345678999999988889999999999999999998 99998654


Q ss_pred             ccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          701 RVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       701 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ...+        +    +...... .        ...........+.+++.+||+.+|++||++.|+++.|+++..
T Consensus       234 ~~~~--------~----~~~~~~~-~--------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         234 APER--------L----FNLLKTG-Y--------RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV  288 (290)
T ss_pred             CHHH--------H----HHHHhCC-C--------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence            2111        1    1111111 0        000111234578899999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-36  Score=310.26  Aligned_cols=267  Identities=25%  Similarity=0.392  Sum_probs=199.7

Q ss_pred             ccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhc--CCCccccceEeeEEecCC----eEEEE
Q 047157          492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIG--RTHHKNLVRLLGFCSEED----KRLLV  565 (788)
Q Consensus       492 ~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~--~l~hpniv~~~~~~~~~~----~~~lV  565 (788)
                      +.++||+|+||.||+|.+.    ++.||||++..   +..+.|.+|-++.+  .++|+||+++++.-....    +++||
T Consensus       214 l~eli~~Grfg~V~KaqL~----~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV  286 (534)
T KOG3653|consen  214 LLELIGRGRFGCVWKAQLD----NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV  286 (534)
T ss_pred             hHHHhhcCccceeehhhcc----CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence            4578999999999999984    36999999964   44567788888776  468999999999876655    89999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhc------cCCceEecCCCCCcEEeccCCCCCCCcEEEee
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE------CETQIIHCDIKPQNVLLDLKTLDTNYMAKISD  639 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~------~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~D  639 (788)
                      +||.++|+|.++|..  ...+|....+|+..+++||+|||+.      ++++|+|||||.+||||.     .+++..|+|
T Consensus       287 t~fh~kGsL~dyL~~--ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK-----~DlTccIaD  359 (534)
T KOG3653|consen  287 TEFHPKGSLCDYLKA--NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVK-----NDLTCCIAD  359 (534)
T ss_pred             eeeccCCcHHHHHHh--ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEc-----cCCcEEeec
Confidence            999999999999954  4789999999999999999999975      567899999999999998     899999999


Q ss_pred             cCCccccCCCCCccc-ccccCCccccCcccccCCC-CC-----ccCcchhhHHHHHHHHhCCCCCCcccccccc------
Q 047157          640 FGISKLLNKDQTRTD-TNMRGTMGYVAPEWLRNVP-VT-----TKVDVFSFGVMLLEIICGRRHIELSRVEEES------  706 (788)
Q Consensus       640 fg~a~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~-~s-----~k~DVwSlGvil~elltg~~p~~~~~~~~~~------  706 (788)
                      ||+|..+........ ...+||.+|||||++.+.. +.     .+.||||+|.+||||++...-+......+.+      
T Consensus       360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~e  439 (534)
T KOG3653|consen  360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAE  439 (534)
T ss_pred             cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHH
Confidence            999998876544432 3478999999999997642 22     3699999999999999865544321111111      


Q ss_pred             ccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          707 EEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       707 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      -..+..+.+ .+......+.+..+   +........+..+.+.+..||+.||+.|.|+.=|.+++.++.-
T Consensus       440 vG~hPt~e~-mq~~VV~kK~RP~~---p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~  505 (534)
T KOG3653|consen  440 VGNHPTLEE-MQELVVRKKQRPKI---PDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM  505 (534)
T ss_pred             hcCCCCHHH-HHHHHHhhccCCCC---hhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence            011111111 11111111111111   1122233567788899999999999999999999888876553

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=3.8e-35  Score=316.75  Aligned_cols=238  Identities=28%  Similarity=0.308  Sum_probs=188.6

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHH-HhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELK-IIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      ++||+|+||+||+|...  .++..||+|.+....   ....+++..|.. +++.++||||+++++.+.+.+..++||||+
T Consensus         1 ~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~   78 (323)
T cd05575           1 KVIGKGSFGKVLLAKHK--ADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYV   78 (323)
T ss_pred             CeeeeCCCeEEEEEEEC--CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCC
Confidence            46899999999999886  667799999987542   222344555554 567899999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++......
T Consensus        79 ~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~-----~~~~~kl~Dfg~~~~~~~~  149 (323)
T cd05575          79 NGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLD-----SQGHVVLTDFGLCKEGIEH  149 (323)
T ss_pred             CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEEC-----CCCcEEEeccCCCcccccC
Confidence            999999988654 5678889999999999999999999   999999999999998     7889999999998754222


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      . .......|++.|+|||++.+..++.++||||||+++|||++|+.||......+.            ........    
T Consensus       150 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~------------~~~i~~~~----  212 (323)
T cd05575         150 S-KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEM------------YDNILNKP----  212 (323)
T ss_pred             C-CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHH------------HHHHHcCC----
Confidence            1 222345689999999999999999999999999999999999999975432111            00111111    


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMK  765 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~  765 (788)
                          ....  ......+.+++.+||+.||++||++.
T Consensus       213 ----~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         213 ----LRLK--PNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             ----CCCC--CCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence                1111  11245678899999999999999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.2e-35  Score=319.92  Aligned_cols=241  Identities=26%  Similarity=0.268  Sum_probs=192.5

Q ss_pred             ccccccccceEEEEEEec-cCcceeeeeeecccchH--HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCC
Q 047157          494 KLVGTGSSGKVYRGILRL-KDTQIEIAVKKLEKDIE--KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMP  570 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~  570 (788)
                      +.||+|+||.||++.... ...+..+|+|.+.....  .....+.+|++++++++||||+++++++.+++..++||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            579999999999987642 24677999999875432  234567789999999999999999999999999999999999


Q ss_pred             CCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCC
Q 047157          571 NGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ  650 (788)
Q Consensus       571 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~  650 (788)
                      +++|.+++.+. ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++.......
T Consensus        82 ~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~-----~~~~~kL~Dfg~~~~~~~~~  152 (318)
T cd05582          82 GGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLD-----EEGHIKLTDFGLSKESIDHE  152 (318)
T ss_pred             CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEEC-----CCCcEEEeeccCCcccCCCC
Confidence            99999998554 5689999999999999999999999   999999999999998     77899999999988654332


Q ss_pred             CcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccc
Q 047157          651 TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLV  730 (788)
Q Consensus       651 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  730 (788)
                      . ......|++.|+|||.+.+..++.++||||||+++|||++|+.||......+.            .........    
T Consensus       153 ~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~------------~~~i~~~~~----  215 (318)
T cd05582         153 K-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET------------MTMILKAKL----  215 (318)
T ss_pred             C-ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH------------HHHHHcCCC----
Confidence            2 22345789999999999988899999999999999999999999975422111            001111110    


Q ss_pred             cCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHH
Q 047157          731 SHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKK  766 (788)
Q Consensus       731 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e  766 (788)
                          ..  +......+.+++.+||+.||++||++.+
T Consensus       216 ----~~--p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         216 ----GM--PQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             ----CC--CCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence                00  1112356778999999999999999544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=3e-35  Score=325.15  Aligned_cols=251  Identities=22%  Similarity=0.239  Sum_probs=193.1

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      +.+.++||+|+||+||+|...  .++..+|+|.+....   ....+.+.+|++++++++||||+++++.+.+.+..++||
T Consensus         3 f~~~~~LG~G~~g~Vy~a~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~   80 (382)
T cd05625           3 FVKIKTLGIGAFGEVCLARKV--DTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM   80 (382)
T ss_pred             cEEEEEEEeCCCEEEEEEEEC--CCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence            456789999999999999886  667799999987542   334567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++|+|.+++.+. ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++..+
T Consensus        81 E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~-----~~g~~kL~DFGla~~~  151 (382)
T cd05625          81 DYIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILID-----RDGHIKLTDFGLCTGF  151 (382)
T ss_pred             eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC-----CCCCEEEeECCCCccc
Confidence            999999999998654 4578888889999999999999999   999999999999998     7889999999997533


Q ss_pred             CCCC----------------------------------------------CcccccccCCccccCcccccCCCCCccCcc
Q 047157          647 NKDQ----------------------------------------------TRTDTNMRGTMGYVAPEWLRNVPVTTKVDV  680 (788)
Q Consensus       647 ~~~~----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~k~DV  680 (788)
                      ....                                              ........||+.|+|||++.+..++.++||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Di  231 (382)
T cd05625         152 RWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDW  231 (382)
T ss_pred             cccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeE
Confidence            1100                                              000112468999999999999999999999


Q ss_pred             hhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCC
Q 047157          681 FSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNL  760 (788)
Q Consensus       681 wSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~  760 (788)
                      |||||++|||++|+.||......+...           . ....  .    ..............+.+++.+|+ .+|++
T Consensus       232 wSlGvil~elltG~~Pf~~~~~~~~~~-----------~-i~~~--~----~~~~~p~~~~~s~~~~~li~~l~-~~p~~  292 (382)
T cd05625         232 WSVGVILYEMLVGQPPFLAQTPLETQM-----------K-VINW--Q----TSLHIPPQAKLSPEASDLIIKLC-RGPED  292 (382)
T ss_pred             EechHHHHHHHhCCCCCCCCCHHHHHH-----------H-HHcc--C----CCcCCCCcccCCHHHHHHHHHHc-cCHhH
Confidence            999999999999999997543211100           0 0000  0    00011111122344556666665 49999


Q ss_pred             CCC---HHHHHHH
Q 047157          761 RPS---MKKVIHM  770 (788)
Q Consensus       761 RPt---~~evl~~  770 (788)
                      |++   ++|++++
T Consensus       293 R~~~~~~~ei~~h  305 (382)
T cd05625         293 RLGKNGADEIKAH  305 (382)
T ss_pred             cCCCCCHHHHhcC
Confidence            997   8888763

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=6.7e-35  Score=304.78  Aligned_cols=255  Identities=22%  Similarity=0.430  Sum_probs=202.5

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      +....+.+.+.||+|+||.||++...   .+..+++|.+... ....+.+.+|++++++++|+||+++++++.+ ...++
T Consensus         3 ~~~~~~~~~~~lg~g~~~~vy~~~~~---~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~   77 (260)
T cd05073           3 IPRESLKLEKKLGAGQFGEVWMATYN---KHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYI   77 (260)
T ss_pred             ccccceeEEeEecCccceEEEEEEec---CCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEE
Confidence            34556778899999999999999764   3447999988654 2345678899999999999999999999887 77899


Q ss_pred             EEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          565 VYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +|||+++++|.+++.+. ...+++..+..++.|++.||.|||+.   +++|+||||+||+++     .++.+||+|||.+
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~-----~~~~~~l~d~~~~  149 (260)
T cd05073          78 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVS-----ASLVCKIADFGLA  149 (260)
T ss_pred             EEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEc-----CCCcEEECCCcce
Confidence            99999999999999653 45678889999999999999999998   999999999999998     7889999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ...............++..|+|||.+....++.++||||||+++|++++ |+.||........        ..    ...
T Consensus       150 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~--------~~----~~~  217 (260)
T cd05073         150 RVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV--------IR----ALE  217 (260)
T ss_pred             eeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHH--------HH----HHh
Confidence            8664433222223345678999999998889999999999999999998 8889865321110        00    011


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                      ..         ............+.+++.+|++.+|++||++.++++.|+.
T Consensus       218 ~~---------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         218 RG---------YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             CC---------CCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            11         0001111234578899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=6.9e-35  Score=304.67  Aligned_cols=253  Identities=26%  Similarity=0.428  Sum_probs=199.3

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ...+.+.+.||+|++|.||++...  . ...+++|.+.... ...+.+.+|++++++++|||++++++++. .+..++||
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~--~-~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~   79 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWN--G-TTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVT   79 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEc--C-CceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEE
Confidence            345777889999999999999875  3 3468999876532 23467889999999999999999999875 45688999


Q ss_pred             ecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+++++|.+++... ...+++..+..++.|++.||.|||+.   +++|+||||+||+++     +++.++|+|||.+..
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~-----~~~~~~l~dfg~~~~  151 (260)
T cd05069          80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVG-----DNLVCKIADFGLARL  151 (260)
T ss_pred             EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEc-----CCCeEEECCCccceE
Confidence            999999999999654 34578999999999999999999998   999999999999998     788999999999986


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .............++..|+|||...+..++.++||||||+++|||++ |+.||......+        ...    .....
T Consensus       152 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--------~~~----~~~~~  219 (260)
T cd05069         152 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--------VLE----QVERG  219 (260)
T ss_pred             ccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHH----HHHcC
Confidence            64332222222345678999999988899999999999999999999 888986532111        001    11110


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                       ..        ..........+.+++.+||+.||++||++++|++.|+.
T Consensus       220 -~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         220 -YR--------MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             -CC--------CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence             00        00111234678889999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=5.7e-35  Score=313.47  Aligned_cols=269  Identities=21%  Similarity=0.278  Sum_probs=198.7

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      +|.+.+.||+|+||.||+|...  .++..||+|.++... ......+.+|++++++++||||+++++++..++..++|||
T Consensus         7 ~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   84 (309)
T cd07872           7 TYIKLEKLGEGTYATVFKGRSK--LTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE   84 (309)
T ss_pred             ceEEEEEecccCCEEEEEEEec--CCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence            4667789999999999999876  566789999886433 2233467789999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++ +|.+++...+..+++..+..++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++....
T Consensus        85 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~-----~~~~~kl~Dfg~~~~~~  155 (309)
T cd07872          85 YLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLIN-----ERGELKLADFGLARAKS  155 (309)
T ss_pred             CCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEC-----CCCCEEECccccceecC
Confidence            9975 88888877667789999999999999999999999   999999999999998     77899999999987643


Q ss_pred             CCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh---HHHHHHHhhc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL---SDWVISCMLS  723 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~  723 (788)
                      .... ......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||......+.........   ....+.....
T Consensus       156 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (309)
T cd07872         156 VPTK-TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISS  234 (309)
T ss_pred             CCcc-ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcc
Confidence            3221 1223457889999998865 468899999999999999999999997654322111100000   0000000000


Q ss_pred             c-cccc--cccCCCCC--cccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          724 R-NLQV--LVSHDPEV--LSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       724 ~-~~~~--l~~~~~~~--~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      . ....  .....+..  .........+.+++.+||+.||.+|||++|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         235 NDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             hhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence            0 0000  00000000  000112356788999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=3.4e-35  Score=317.15  Aligned_cols=246  Identities=27%  Similarity=0.333  Sum_probs=195.1

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV  565 (788)
                      |.+.+.||+|+||.||+|...  .++..||+|.+.+..   ....+.+..|..++..+ +|++|+++++++.+.+..++|
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv   79 (323)
T cd05616           2 FNFLMVLGKGSFGKVMLAERK--GTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFV   79 (323)
T ss_pred             ceEEEEEeeCCCeEEEEEEEC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEE
Confidence            456789999999999999886  667799999987543   22334567788888777 689999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++|+|.+++... ..+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||++..
T Consensus        80 ~E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~-----~~~~~kL~DfG~~~~  150 (323)
T cd05616          80 MEYVNGGDLMYQIQQV-GRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLD-----SEGHIKIADFGMCKE  150 (323)
T ss_pred             EcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEEC-----CCCcEEEccCCCcee
Confidence            9999999999988654 4678899999999999999999999   999999999999998     788999999999875


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........        .    .......
T Consensus       151 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~--------~----~~i~~~~  217 (323)
T cd05616         151 NMWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL--------F----QSIMEHN  217 (323)
T ss_pred             cCCCCC-ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH--------H----HHHHhCC
Confidence            432221 22345689999999999999999999999999999999999999975432111        0    1111111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCH-----HHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSM-----KKVIH  769 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~  769 (788)
                              ..  .+.....++.+++.+||+.||++|++.     +++++
T Consensus       218 --------~~--~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~  256 (323)
T cd05616         218 --------VA--YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  256 (323)
T ss_pred             --------CC--CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhc
Confidence                    00  011234567889999999999999984     56654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=9.3e-35  Score=303.27  Aligned_cols=250  Identities=32%  Similarity=0.524  Sum_probs=203.4

Q ss_pred             ccccccccceEEEEEEecc-CcceeeeeeecccchHH-HHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCC
Q 047157          494 KLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKDIEK-TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPN  571 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~  571 (788)
                      +.||+|+||.||++..... ..+..+++|.+...... ..+.+.+|++.+.+++|+||+++++++.+....++||||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            4689999999999998732 23678999998765433 367899999999999999999999999999999999999999


Q ss_pred             CCHhHhhhcc--------CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          572 GTLSNFLFHE--------GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       572 gsL~~~l~~~--------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      ++|.+++...        ...+++..++.++.|++.||.|||++   +++|+||||+||+++     .++.+||+|||.+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~-----~~~~~~l~dfg~~  152 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVG-----EDLVVKISDFGLS  152 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEEC-----CCCcEEEcccccc
Confidence            9999999775        47789999999999999999999998   999999999999998     7789999999999


Q ss_pred             cccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHh
Q 047157          644 KLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       644 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      ........ .......++..|+|||.+....++.++||||||+++|||++ |..||......+            .....
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------------~~~~~  220 (262)
T cd00192         153 RDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE------------VLEYL  220 (262)
T ss_pred             cccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH------------HHHHH
Confidence            87754331 12233457889999999988899999999999999999999 589987542211            01111


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                      ....         ..........++.+++.+||+.+|++|||++|++++|+
T Consensus       221 ~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         221 RKGY---------RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             HcCC---------CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            1110         00111122567889999999999999999999999884

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.3e-35  Score=323.34  Aligned_cols=251  Identities=20%  Similarity=0.215  Sum_probs=194.6

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      |.+.+.||+|+||+||++...  .++..||||.+....   ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus         3 y~~~~~lG~G~~g~Vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           3 FHTVKVIGKGAFGEVRLVQKK--DTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             ceEeEEEeecCCEEEEEEEEC--CCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            556789999999999999876  667799999886532   234567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++|+|.+++... ..+++..+..++.|++.||+|||++   +|+||||||+|||++     .++.+||+|||++...
T Consensus        81 E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~-----~~~~~kl~DfGla~~~  151 (377)
T cd05629          81 EFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILID-----RGGHIKLSDFGLSTGF  151 (377)
T ss_pred             eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEC-----CCCCEEEeeccccccc
Confidence            999999999998654 5678888889999999999999999   999999999999998     7889999999998643


Q ss_pred             CCCCCc----------------------------------------------ccccccCCccccCcccccCCCCCccCcc
Q 047157          647 NKDQTR----------------------------------------------TDTNMRGTMGYVAPEWLRNVPVTTKVDV  680 (788)
Q Consensus       647 ~~~~~~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~s~k~DV  680 (788)
                      ......                                              ......||+.|+|||++.+..++.++||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di  231 (377)
T cd05629         152 HKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDW  231 (377)
T ss_pred             ccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceee
Confidence            210000                                              0012468999999999999999999999


Q ss_pred             hhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCC
Q 047157          681 FSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNL  760 (788)
Q Consensus       681 wSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~  760 (788)
                      |||||++|||++|+.||......+..            ......  ..    .............+.+++.+|++ +|.+
T Consensus       232 wSlGvil~elltG~~Pf~~~~~~~~~------------~~i~~~--~~----~~~~p~~~~~s~~~~dli~~lL~-~~~~  292 (377)
T cd05629         232 WSLGAIMFECLIGWPPFCSENSHETY------------RKIINW--RE----TLYFPDDIHLSVEAEDLIRRLIT-NAEN  292 (377)
T ss_pred             EecchhhhhhhcCCCCCCCCCHHHHH------------HHHHcc--CC----ccCCCCCCCCCHHHHHHHHHHhc-CHhh
Confidence            99999999999999999754321110            000000  00    00011111223567788888997 6666


Q ss_pred             C---CCHHHHHHH
Q 047157          761 R---PSMKKVIHM  770 (788)
Q Consensus       761 R---Pt~~evl~~  770 (788)
                      |   +++.|++++
T Consensus       293 r~~r~~~~~~l~h  305 (377)
T cd05629         293 RLGRGGAHEIKSH  305 (377)
T ss_pred             cCCCCCHHHHhcC
Confidence            5   599998875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=1.2e-34  Score=304.36  Aligned_cols=254  Identities=28%  Similarity=0.408  Sum_probs=191.6

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      +.||+|+||.||+|..........+++|.++... ......+.+|+.++++++||||+++++++.+....++||||++++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            4689999999999987655566789999886543 234457889999999999999999999999999999999999999


Q ss_pred             CHhHhhhccC----CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          573 TLSNFLFHEG----QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       573 sL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +|.+++....    ...++..+..++.|++.||+|||+.   +++|+||||+||+++     .++.+||+|||.+.....
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~-----~~~~~kL~dfg~~~~~~~  152 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLT-----ADLTVKIGDYGLSHNKYK  152 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEc-----CCCcEEECCccccccccC
Confidence            9999996432    2456778889999999999999999   999999999999998     778999999999875433


Q ss_pred             CCCcc-cccccCCccccCcccccCC-------CCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHH
Q 047157          649 DQTRT-DTNMRGTMGYVAPEWLRNV-------PVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVIS  719 (788)
Q Consensus       649 ~~~~~-~~~~~gt~~y~aPE~~~~~-------~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~  719 (788)
                      ..... .....++..|+|||++.+.       .++.++||||||+++|||++ |+.||......+.        ....  
T Consensus       153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~--------~~~~--  222 (269)
T cd05087         153 EDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV--------LTYT--  222 (269)
T ss_pred             cceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH--------HHHH--
Confidence            22211 1234567889999988542       35789999999999999996 9999965422111        0000  


Q ss_pred             HhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          720 CMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       720 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                       .. ........  +..  .....+.+.+++..|+ .+|++|||++||++.|+
T Consensus       223 -~~-~~~~~~~~--~~~--~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         223 -VR-EQQLKLPK--PRL--KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             -hh-cccCCCCC--Ccc--CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence             00 00011111  111  1112345667888898 58999999999999885

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.2e-35  Score=305.64  Aligned_cols=256  Identities=29%  Similarity=0.464  Sum_probs=204.4

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      +....+.+.++||+|+||.||+|...   ....++||.+.... ...+++.+|+.++++++||||+++++++......++
T Consensus         3 ~~~~~~~i~~~ig~g~~~~v~~~~~~---~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   78 (261)
T cd05034           3 IPRESLKLERKLGAGQFGEVWMGTWN---GTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYI   78 (261)
T ss_pred             cchhheeeeeeeccCcceEEEEEEEc---CCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEE
Confidence            34556777899999999999999874   34679999887543 234678999999999999999999999999899999


Q ss_pred             EEecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          565 VYELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      ||||+++++|.+++.... ..+++..+..++.|++.||.|||++   +++|+||||+||+++     +++.+||+|||.+
T Consensus        79 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~-----~~~~~~l~d~g~~  150 (261)
T cd05034          79 VTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVG-----ENLVCKIADFGLA  150 (261)
T ss_pred             EEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEc-----CCCCEEECccccc
Confidence            999999999999997643 5689999999999999999999999   999999999999998     7889999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ................+..|+|||.+.+..++.++||||||+++|||++ |+.||........            .....
T Consensus       151 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~------------~~~~~  218 (261)
T cd05034         151 RLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREV------------LEQVE  218 (261)
T ss_pred             eeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH------------HHHHH
Confidence            8765432222222334568999999998899999999999999999998 9999864321110            01111


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                      .. ..        ...+......+.+++.+|++.+|++||+++++.+.|+.
T Consensus       219 ~~-~~--------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         219 RG-YR--------MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             cC-CC--------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            00 00        00011124578889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=6.5e-35  Score=315.33  Aligned_cols=250  Identities=24%  Similarity=0.317  Sum_probs=195.1

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEEecC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      ++||+|+||.||++...  .++..+|+|.+++..   ....+.+.+|+.++.++ +||||+++++++.+.+..++||||+
T Consensus         1 ~~lG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   78 (327)
T cd05617           1 RVIGRGSYAKVLLVRLK--KNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYV   78 (327)
T ss_pred             CeeeeCCCeEEEEEEEC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCC
Confidence            46999999999999886  667799999997543   23345688999999888 6999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|..++... ..+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||++......
T Consensus        79 ~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~-----~~~~~kl~Dfg~~~~~~~~  149 (327)
T cd05617          79 NGGDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLD-----ADGHIKLTDYGMCKEGLGP  149 (327)
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEe-----CCCCEEEeccccceeccCC
Confidence            999999888544 5689999999999999999999999   999999999999998     7889999999998753221


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      . .......||+.|+|||++.+..++.++||||||+++|||++|+.||..........     ..............   
T Consensus       150 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~-----~~~~~~~~~~~~~~---  220 (327)
T cd05617         150 G-DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMN-----TEDYLFQVILEKPI---  220 (327)
T ss_pred             C-CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccc-----cHHHHHHHHHhCCC---
Confidence            1 12234578999999999999999999999999999999999999996532221111     11111111111111   


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCH------HHHHHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSM------KKVIHM  770 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~------~evl~~  770 (788)
                           ..  +......+.+++.+||+.||++||++      ++++++
T Consensus       221 -----~~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  260 (327)
T cd05617         221 -----RI--PRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH  260 (327)
T ss_pred             -----CC--CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence                 10  11123557789999999999999984      566553

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=4.7e-35  Score=321.48  Aligned_cols=257  Identities=22%  Similarity=0.242  Sum_probs=199.8

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCe
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDK  561 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  561 (788)
                      +....|.+.+.||+|+||.||++...  .++..+|+|.+.+..   ....+.+.+|+.+++.++||||+++++.+.+++.
T Consensus        40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (371)
T cd05622          40 MKAEDYEVVKVIGRGAFGEVQLVRHK--STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY  117 (371)
T ss_pred             cchhhcEEEEEEeecCCeEEEEEEEC--CCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence            34466778899999999999999886  677799999986432   2334567889999999999999999999999999


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      .++||||+++++|.+++...  .++...+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||
T Consensus       118 ~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~-----~~~~ikL~DfG  187 (371)
T cd05622         118 LYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLD-----KSGHLKLADFG  187 (371)
T ss_pred             EEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEEC-----CCCCEEEEeCC
Confidence            99999999999999998543  578888889999999999999999   999999999999998     78899999999


Q ss_pred             CccccCCCCCcccccccCCccccCcccccCC----CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHH
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV----PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV  717 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~  717 (788)
                      ++...............||+.|+|||++...    .++.++|||||||++|||++|+.||........            
T Consensus       188 ~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~------------  255 (371)
T cd05622         188 TCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT------------  255 (371)
T ss_pred             ceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHH------------
Confidence            9987654433333446799999999998654    378899999999999999999999975432110            


Q ss_pred             HHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCC--CCCHHHHHHHh
Q 047157          718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNL--RPSMKKVIHML  771 (788)
Q Consensus       718 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~L  771 (788)
                      ...+.... .     .............+.+++..||+.++.+  ||+++|++++.
T Consensus       256 ~~~i~~~~-~-----~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~  305 (371)
T cd05622         256 YSKIMNHK-N-----SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL  305 (371)
T ss_pred             HHHHHcCC-C-----cccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence            01111100 0     0011111233456778888999844433  78999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=4.3e-35  Score=317.33  Aligned_cols=255  Identities=21%  Similarity=0.220  Sum_probs=197.7

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||.||++...  .++..||+|.+.+..   ......+.+|..++..++|+||+++++++.+++..++|
T Consensus         2 ~y~i~~~lG~G~fg~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv   79 (331)
T cd05624           2 DFEIIKVIGRGAFGEVAVVKMK--HTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLV   79 (331)
T ss_pred             CceEEEEEeeCCCeEEEEEEEC--CCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence            3567789999999999999876  567789999986532   23345678899999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++|+|.+++......+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++..
T Consensus        80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~-----~~~~~kl~DfG~a~~  151 (331)
T cd05624          80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLD-----MNGHIRLADFGSCLK  151 (331)
T ss_pred             EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEc-----CCCCEEEEeccceee
Confidence            999999999999977666788999999999999999999999   999999999999998     778999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccC-----CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRN-----VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      .............|++.|+|||++.+     ..++.++||||||+++|||++|+.||......+.            ...
T Consensus       152 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~------------~~~  219 (331)
T cd05624         152 MNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET------------YGK  219 (331)
T ss_pred             ccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHH------------HHH
Confidence            65444333334568999999999865     4678999999999999999999999975422111            001


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCC--CCCHHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNL--RPSMKKVIHM  770 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~  770 (788)
                      .........   .+...  ....+++.+++.+|+..++++  |+++++++++
T Consensus       220 i~~~~~~~~---~p~~~--~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         220 IMNHEERFQ---FPSHI--TDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             HHcCCCccc---CCCcc--ccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence            111000000   00000  112456777888888765544  4688888765

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.7e-35  Score=303.50  Aligned_cols=250  Identities=29%  Similarity=0.432  Sum_probs=202.9

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ...+.+.+.||+|+||.||+|...    +..|++|.+..... ..+++.+|+.++++++|+||+++++++.+.+..++||
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~----~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   79 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR----GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT   79 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec----CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence            345667889999999999999763    56899999976644 5678999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+++++|.+++.... ..+++..+..++.|++.||.|||++   +++|+||||+||+++     .++.+||+|||.+..
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~-----~~~~~~l~d~g~~~~  151 (256)
T cd05039          80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVS-----EDLVAKVSDFGLAKE  151 (256)
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEe-----CCCCEEEcccccccc
Confidence            9999999999996553 3689999999999999999999999   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ......    ....+..|+|||.+....++.++||||||+++||+++ |+.||......+        +    .......
T Consensus       152 ~~~~~~----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~----~~~~~~~  215 (256)
T cd05039         152 ASQGQD----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--------V----VPHVEKG  215 (256)
T ss_pred             cccccc----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH--------H----HHHHhcC
Confidence            633222    2234567999999988899999999999999999997 999986442211        0    0111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      .       ..  .......+.+.+++.+||+.+|++|||++|++++|+++
T Consensus       216 ~-------~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         216 Y-------RM--EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             C-------CC--CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence            0       00  00112346788999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=9.9e-35  Score=303.71  Aligned_cols=253  Identities=28%  Similarity=0.457  Sum_probs=195.2

Q ss_pred             ccccccccceEEEEEEec-cCcceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEe-cCCeEEEEEecCC
Q 047157          494 KLVGTGSSGKVYRGILRL-KDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCS-EEDKRLLVYELMP  570 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lV~e~~~  570 (788)
                      +.||+|+||.||+|.... ......+|+|.+... .....+.+.+|+.+++.++||||+++++++. .+...++|+||+.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            468999999999998752 234568999988543 2345678889999999999999999999875 4556899999999


Q ss_pred             CCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCC
Q 047157          571 NGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ  650 (788)
Q Consensus       571 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~  650 (788)
                      +++|.+++.......++..+..++.||+.||.|||+.   +++||||||+|||++     .++.+||+|||++.......
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~-----~~~~~kl~dfg~~~~~~~~~  152 (262)
T cd05058          81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLD-----ESFTVKVADFGLARDIYDKE  152 (262)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEc-----CCCcEEECCccccccccCCc
Confidence            9999999977666678888899999999999999998   999999999999998     77899999999997653322


Q ss_pred             Cc---ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCC-CCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          651 TR---TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR-RHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       651 ~~---~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      ..   ......++..|+|||.+.+..++.++||||||+++|||++|. .||......        .....    ...+. 
T Consensus       153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~--------~~~~~----~~~~~-  219 (262)
T cd05058         153 YYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF--------DITVY----LLQGR-  219 (262)
T ss_pred             ceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHH----HhcCC-
Confidence            11   111234567899999998889999999999999999999964 555432111        11111    11110 


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                            .+.  .....+..+.+++..||+.+|++||++.||++.|+++.
T Consensus       220 ------~~~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~  260 (262)
T cd05058         220 ------RLL--QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF  260 (262)
T ss_pred             ------CCC--CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence                  000  01112356888999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=4.1e-35  Score=314.26  Aligned_cols=263  Identities=28%  Similarity=0.407  Sum_probs=204.6

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccC-----cceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEe
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKD-----TQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCS  557 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~-----~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~  557 (788)
                      +....|.+.+.||+|+||.||++.....+     ....+|+|.+.... .....++.+|+++++++ +||||+++++++.
T Consensus        15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (307)
T cd05098          15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT   94 (307)
T ss_pred             eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence            33456788899999999999999864211     23469999987542 34456788999999999 7999999999999


Q ss_pred             cCCeEEEEEecCCCCCHhHhhhccC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcE
Q 047157          558 EEDKRLLVYELMPNGTLSNFLFHEG---------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNV  622 (788)
Q Consensus       558 ~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  622 (788)
                      ..+..++||||+++++|.+++....               ..+++.+++.++.|++.||+|||++   +++||||||+||
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni  171 (307)
T cd05098          95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV  171 (307)
T ss_pred             cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHhe
Confidence            9999999999999999999996532               2478899999999999999999998   999999999999


Q ss_pred             EeccCCCCCCCcEEEeecCCccccCCCCCcc-cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCcc
Q 047157          623 LLDLKTLDTNYMAKISDFGISKLLNKDQTRT-DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELS  700 (788)
Q Consensus       623 ll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~  700 (788)
                      +++     .++.+||+|||.+.......... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus       172 ll~-----~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~  246 (307)
T cd05098         172 LVT-----EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV  246 (307)
T ss_pred             EEc-----CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence            998     77899999999987654322111 111234568999999998899999999999999999998 88888643


Q ss_pred             ccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          701 RVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       701 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ...+.            .........       .  .........+.+++.+||+.+|++|||+.+|++.|+++..
T Consensus       247 ~~~~~------------~~~~~~~~~-------~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~  301 (307)
T cd05098         247 PVEEL------------FKLLKEGHR-------M--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA  301 (307)
T ss_pred             CHHHH------------HHHHHcCCC-------C--CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence            22110            001111100       0  0111234577889999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=2.2e-35  Score=325.63  Aligned_cols=251  Identities=21%  Similarity=0.227  Sum_probs=194.2

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      |.+.+.||+|+||.||++...  .++..||+|.+.+..   ....+.+.+|++++++++||||+++++.+.+++..++||
T Consensus         3 y~~~~~lG~G~~g~V~~a~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           3 FVKIKTIGIGAFGEVCLVRKV--DTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             ceEEEEEEeCCCeEEEEEEEC--CCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            567789999999999999876  567799999986532   223456889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++|+|.+++... ..+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||++..+
T Consensus        81 E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~-----~~~~ikL~DFG~a~~~  151 (376)
T cd05598          81 DYIPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILID-----RDGHIKLTDFGLCTGF  151 (376)
T ss_pred             eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEEC-----CCCCEEEEeCCCCccc
Confidence            999999999999654 4578888889999999999999999   999999999999998     7889999999997533


Q ss_pred             CCCC------------------------------------------CcccccccCCccccCcccccCCCCCccCcchhhH
Q 047157          647 NKDQ------------------------------------------TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFG  684 (788)
Q Consensus       647 ~~~~------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlG  684 (788)
                      ....                                          ........||+.|+|||++.+..++.++||||||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  231 (376)
T cd05598         152 RWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG  231 (376)
T ss_pred             cccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecc
Confidence            1000                                          0001134689999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC--
Q 047157          685 VMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP--  762 (788)
Q Consensus       685 vil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP--  762 (788)
                      |++|||++|+.||......+...            ......  .    .............+.+++.+|+ .+|.+|+  
T Consensus       232 vilyell~G~~Pf~~~~~~~~~~------------~i~~~~--~----~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~  292 (376)
T cd05598         232 VILYEMLVGQPPFLADTPAETQL------------KVINWE--T----TLHIPSQAKLSREASDLILRLC-CGAEDRLGK  292 (376)
T ss_pred             ceeeehhhCCCCCCCCCHHHHHH------------HHhccC--c----cccCCCCCCCCHHHHHHHHHHh-cCHhhcCCC
Confidence            99999999999997653221100            000000  0    0000001112344556666665 5999999  


Q ss_pred             -CHHHHHHH
Q 047157          763 -SMKKVIHM  770 (788)
Q Consensus       763 -t~~evl~~  770 (788)
                       ++.|++++
T Consensus       293 ~t~~ell~h  301 (376)
T cd05598         293 NGADEIKAH  301 (376)
T ss_pred             CCHHHHhCC
Confidence             89999875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=2.9e-35  Score=307.20  Aligned_cols=248  Identities=24%  Similarity=0.387  Sum_probs=193.0

Q ss_pred             ccccccccceEEEEEEeccC-----cceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          494 KLVGTGSSGKVYRGILRLKD-----TQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~-----~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      +.||+|+||.||+|......     ....+++|.+........+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            46899999999999875321     2345888988766556667889999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCC---CCCCcEEEeecCCccc
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL---DTNYMAKISDFGISKL  645 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~---~~~~~~kL~Dfg~a~~  645 (788)
                      +++|+|.+++...+..+++..++.++.||+.||+|||++   +|+||||||+||+++.++.   .....++++|||.+..
T Consensus        81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~  157 (258)
T cd05078          81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT  157 (258)
T ss_pred             CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence            999999999987766789999999999999999999999   9999999999999984321   1123479999999875


Q ss_pred             cCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCC-CCCCccccccccccchhhhHHHHHHHhhc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR-RHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ....     ....++..|+|||.+.+ ..++.++||||||+++|||++|. .|+.......        ...    .. .
T Consensus       158 ~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~--------~~~----~~-~  219 (258)
T cd05078         158 VLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK--------KLQ----FY-E  219 (258)
T ss_pred             cCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH--------HHH----HH-H
Confidence            4322     22457889999999976 45789999999999999999995 5554321110        000    00 0


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                      .        .....  ......+.+++.+||+.||++|||++++++.|+
T Consensus       220 ~--------~~~~~--~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         220 D--------RHQLP--APKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             c--------cccCC--CCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            0        00000  012246788999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=7.7e-35  Score=303.27  Aligned_cols=249  Identities=23%  Similarity=0.345  Sum_probs=203.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .|.+.+.||+|+||.||+|...  .++..+++|.+.....  .+++.+|++++++++||||+++++.+.+....++++||
T Consensus         4 ~y~~~~~i~~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~   79 (256)
T cd06612           4 VFDILEKLGEGSYGSVYKAIHK--ETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY   79 (256)
T ss_pred             cchhhhhhcCCCCeEEEEEEEc--CCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence            4566788999999999999886  4567899999875433  67899999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++++|.+++......+++..+..++.|++.||.|||+.   +++|+||+|+||+++     .++.+||+|||++.....
T Consensus        80 ~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~-----~~~~~~l~dfg~~~~~~~  151 (256)
T cd06612          80 CGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLN-----EEGQAKLADFGVSGQLTD  151 (256)
T ss_pred             CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEC-----CCCcEEEcccccchhccc
Confidence            999999999977777889999999999999999999999   999999999999998     778999999999987654


Q ss_pred             CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      ... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||.........            .....     
T Consensus       152 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~------------~~~~~-----  213 (256)
T cd06612         152 TMA-KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI------------FMIPN-----  213 (256)
T ss_pred             Ccc-ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh------------hhhcc-----
Confidence            322 222345788999999999989999999999999999999999999753221100            00000     


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                        ...............+.+++.+||+.||++|||++||++
T Consensus       214 --~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         214 --KPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             --CCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence              001111112233467888999999999999999999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=4.4e-35  Score=305.71  Aligned_cols=253  Identities=30%  Similarity=0.479  Sum_probs=199.9

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchHHHH--HHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN--EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~--~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      |.+.+.||+|+||+||++...  .++..+|+|.+........  ....+|+.++++++||||+++++++.+....++|||
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~--~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~   78 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNK--KNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVME   78 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEET--TTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEEC--CCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccc
Confidence            467789999999999999887  6777999999976543332  234569999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      ++++++|.+++. ....+++..+..++.||++||.+||+.   +|+|+||||+||+++     .++.++|+|||.+....
T Consensus        79 ~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~-----~~~~~~l~Dfg~~~~~~  149 (260)
T PF00069_consen   79 YCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLD-----ENGEVKLIDFGSSVKLS  149 (260)
T ss_dssp             EETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEES-----TTSEEEESSGTTTEEST
T ss_pred             cccccccccccc-ccccccccccccccccccccccccccc---ccccccccccccccc-----ccccccccccccccccc
Confidence            999999999997 346779999999999999999999999   999999999999998     88899999999998642


Q ss_pred             CCCCcccccccCCccccCccccc-CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLR-NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                       ..........++..|+|||++. +...+.++||||+|+++|+|++|..||...........    ...     ......
T Consensus       150 -~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~----~~~-----~~~~~~  219 (260)
T PF00069_consen  150 -ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEI----IEK-----ILKRPL  219 (260)
T ss_dssp             -STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHH----HHH-----HHHTHH
T ss_pred             -ccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhh----hhh-----cccccc
Confidence             1222333466889999999998 88999999999999999999999999976511111000    000     000000


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ....   .   ........+.+++..||+.||++||++.++++
T Consensus       220 ~~~~---~---~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  220 PSSS---Q---QSREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHT---T---SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             cccc---c---ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0000   0   00001268889999999999999999999985

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=1.2e-34  Score=308.36  Aligned_cols=253  Identities=25%  Similarity=0.325  Sum_probs=202.6

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      ..|.+.++||+|+||.||+|...  .++..+++|.+........+.+.+|+++++.++||||+++++.+..+...++|||
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   89 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNK--ETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE   89 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEEC--CCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence            34667789999999999999886  5677999999987766677889999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++++|..++.+....+++..+..++.|++.+|.|||+.   +++||||||+||+++     .++.+||+|||++....
T Consensus        90 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~-----~~~~~kl~dfg~~~~~~  161 (292)
T cd06644          90 FCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLT-----LDGDIKLADFGVSAKNV  161 (292)
T ss_pred             cCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEc-----CCCCEEEccCccceecc
Confidence            9999999998876667789999999999999999999998   999999999999998     77899999999987543


Q ss_pred             CCCCcccccccCCccccCccccc-----CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLR-----NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ... .......++..|+|||++.     ...++.++||||||+++|||++|+.||.......       .    . ....
T Consensus       162 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-------~----~-~~~~  228 (292)
T cd06644         162 KTL-QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-------V----L-LKIA  228 (292)
T ss_pred             ccc-cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH-------H----H-HHHh
Confidence            221 1122345788999999884     4457889999999999999999999986532111       0    0 0000


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ...       .+...........+.+++.+||+.||++||+++++++.
T Consensus       229 ~~~-------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  269 (292)
T cd06644         229 KSE-------PPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH  269 (292)
T ss_pred             cCC-------CccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            000       11111112334567889999999999999999999763

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-34  Score=303.62  Aligned_cols=250  Identities=22%  Similarity=0.280  Sum_probs=198.5

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch-----HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-----EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      +...+.||+|++|.||++...  .++..+++|.+....     ....+.+.+|++++++++||||+++++++.+++..++
T Consensus         4 ~~~~~~lg~g~~~~vy~~~~~--~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           4 WRRGKLLGQGAFGRVYLCYDV--DTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             ccccceecCCCceEEEEEEEc--CCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            556789999999999999876  567799999875331     2234578899999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |+||+++++|.+++... ..++...+..++.|++.||.|||+.   +|+|+||+|+||+++     .++.++|+|||++.
T Consensus        82 v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~-----~~~~~~l~dfg~~~  152 (263)
T cd06625          82 FMEYMPGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRD-----SAGNVKLGDFGASK  152 (263)
T ss_pred             EEEECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEc-----CCCCEEEeecccce
Confidence            99999999999998654 4578888899999999999999999   999999999999998     77899999999987


Q ss_pred             ccCCCCCccc--ccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          645 LLNKDQTRTD--TNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       645 ~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ..........  ....++..|+|||.+.+..++.++||||||+++|||++|+.||........           ......
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-----------~~~~~~  221 (263)
T cd06625         153 RLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA-----------IFKIAT  221 (263)
T ss_pred             eccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH-----------HHHHhc
Confidence            6543222111  234577899999999998999999999999999999999999864321110           000000


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ..         .....+......+.+++.+||+.+|++|||++|++++
T Consensus       222 ~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         222 QP---------TNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             cC---------CCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            00         0001111234567889999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=4.4e-35  Score=332.17  Aligned_cols=252  Identities=25%  Similarity=0.314  Sum_probs=200.6

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCC-----
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED-----  560 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----  560 (788)
                      ..|.+.+.||+|+||+||++...  .++..||||.+...  .......+.+|+..+..++|+||+++++.+...+     
T Consensus        32 ~rY~i~~~LG~G~fG~Vy~a~~~--~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~  109 (496)
T PTZ00283         32 KKYWISRVLGSGATGTVLCAKRV--SDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE  109 (496)
T ss_pred             CCEEEEEEEecCCCEEEEEEEEc--CCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence            36777899999999999999876  56779999998643  2445567889999999999999999988765432     


Q ss_pred             ---eEEEEEecCCCCCHhHhhhcc---CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCc
Q 047157          561 ---KRLLVYELMPNGTLSNFLFHE---GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM  634 (788)
Q Consensus       561 ---~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~  634 (788)
                         ..++||||+++|+|.+++...   ...+++..+..++.|++.||.|||++   +|+||||||+|||++     .++.
T Consensus       110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~-----~~~~  181 (496)
T PTZ00283        110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLC-----SNGL  181 (496)
T ss_pred             cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEe-----CCCC
Confidence               368999999999999998643   34678999999999999999999999   999999999999998     7889


Q ss_pred             EEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh
Q 047157          635 AKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL  713 (788)
Q Consensus       635 ~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~  713 (788)
                      +||+|||+++....... .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+.        
T Consensus       182 vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~--------  253 (496)
T PTZ00283        182 VKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEV--------  253 (496)
T ss_pred             EEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--------
Confidence            99999999986643222 222346789999999999999999999999999999999999999975422110        


Q ss_pred             HHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          714 SDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       714 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                          ......+....+         +......+.+++..||+.||++||++.+++++
T Consensus       254 ----~~~~~~~~~~~~---------~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        254 ----MHKTLAGRYDPL---------PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             ----HHHHhcCCCCCC---------CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence                111111111110         11234568889999999999999999999864

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=1.2e-34  Score=306.13  Aligned_cols=250  Identities=26%  Similarity=0.411  Sum_probs=196.8

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      +.+.++||+|+||.||+|...  .++..||+|.+... .....+++.+|++++++++||||+++++++...+..++||||
T Consensus         3 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           3 IQYQEILGHGNGGTVYKAYHL--LTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             chheeeeccCCCeEEEEEEEc--CCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            345688999999999999876  56778999988654 244556799999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++++|..+.     .+++..+..++.|++.||.|||+.   +|+|+||||+||+++     .++.+||+|||++.....
T Consensus        81 ~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~-----~~~~~~l~dfg~~~~~~~  147 (279)
T cd06619          81 MDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVN-----TRGQVKLCDFGVSTQLVN  147 (279)
T ss_pred             CCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEEC-----CCCCEEEeeCCcceeccc
Confidence            9999997653     467888889999999999999999   999999999999998     788999999999976543


Q ss_pred             CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      ..   .....++..|+|||.+.+..++.++||||||+++|+|++|+.||............    .. ........    
T Consensus       148 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~----~~-~~~~~~~~----  215 (279)
T cd06619         148 SI---AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMP----LQ-LLQCIVDE----  215 (279)
T ss_pred             cc---ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccch----HH-HHHHHhcc----
Confidence            21   22356889999999999989999999999999999999999999653221111000    00 00111111    


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                          ............++.+++.+||+.||++||+++|++++
T Consensus       216 ----~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         216 ----DPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             ----CCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence                11111111234567889999999999999999999865

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-34  Score=300.63  Aligned_cols=248  Identities=28%  Similarity=0.445  Sum_probs=199.0

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchH-HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE-KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      ++||+|+||.||++...  + +..|++|.+..... ...+.+.+|++++++++||||+++++++.+....++|+||++++
T Consensus         1 ~~lg~g~~g~v~~~~~~--~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~   77 (251)
T cd05041           1 EKIGKGNFGDVYKGVLK--G-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG   77 (251)
T ss_pred             CccccCCCceEEEEEEe--C-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence            46899999999999875  4 67999998875433 35678999999999999999999999999999999999999999


Q ss_pred             CHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCc
Q 047157          573 TLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR  652 (788)
Q Consensus       573 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~  652 (788)
                      +|.+++......+++..+..++.+++.||.|||++   +++||||||+||+++     .++.+||+|||.+.........
T Consensus        78 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~-----~~~~~~l~d~g~~~~~~~~~~~  149 (251)
T cd05041          78 SLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVG-----ENNVLKISDFGMSREEEGGIYT  149 (251)
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEc-----CCCcEEEeeccccccccCCcce
Confidence            99999977666788999999999999999999999   999999999999998     7789999999999865422211


Q ss_pred             cc-ccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcccccccc
Q 047157          653 TD-TNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLV  730 (788)
Q Consensus       653 ~~-~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  730 (788)
                      .. .....+..|+|||.+.+..++.++||||||+++|||++ |..||........        ..    .....      
T Consensus       150 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~--------~~----~~~~~------  211 (251)
T cd05041         150 VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQT--------RE----RIESG------  211 (251)
T ss_pred             eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHH--------HH----HHhcC------
Confidence            11 11233567999999988899999999999999999999 7888865422110        00    00000      


Q ss_pred             cCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          731 SHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       731 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                         ............+.+++.+||+.+|++|||+.|+++.|+.
T Consensus       212 ---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~  251 (251)
T cd05041         212 ---YRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI  251 (251)
T ss_pred             ---CCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence               0001111234578899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=4.2e-35  Score=316.71  Aligned_cols=242  Identities=26%  Similarity=0.300  Sum_probs=188.6

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHH-HhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELK-IIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      +.||+|+||+||++...  .++..+|+|.+....   ......+..|.. +++.++||||+++++++.+.+..++||||+
T Consensus         1 ~~lg~G~fg~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~   78 (325)
T cd05602           1 KVIGKGSFGKVLLARHK--AEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYI   78 (325)
T ss_pred             CeeeeCCCeEEEEEEEC--CCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCC
Confidence            46899999999999886  566789999987532   122334445544 567889999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|.+++... ..+....+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++......
T Consensus        79 ~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~-----~~~~~kl~DfG~a~~~~~~  149 (325)
T cd05602          79 NGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLD-----SQGHIVLTDFGLCKENIEH  149 (325)
T ss_pred             CCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEC-----CCCCEEEccCCCCcccccC
Confidence            999999998654 4567788888999999999999999   999999999999998     7789999999998754322


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      . .......|++.|+|||++.+..++.++||||||+++|||++|+.||......+.            ........    
T Consensus       150 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~------------~~~i~~~~----  212 (325)
T cd05602         150 N-GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM------------YDNILNKP----  212 (325)
T ss_pred             C-CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH------------HHHHHhCC----
Confidence            1 122345689999999999999999999999999999999999999975432111            00011110    


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                          ...  .......+.+++.+||+.||.+||++.+.+.
T Consensus       213 ----~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~  246 (325)
T cd05602         213 ----LQL--KPNITNSARHLLEGLLQKDRTKRLGAKDDFM  246 (325)
T ss_pred             ----cCC--CCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence                000  1122456778999999999999999875443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=1.1e-34  Score=307.88  Aligned_cols=262  Identities=25%  Similarity=0.422  Sum_probs=202.9

Q ss_pred             HHHhhcccccccccccceEEEEEEec---cCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCe
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDK  561 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  561 (788)
                      ....|.+.++||+|+||.||+|..+.   ...+..||+|.+.... ......+.+|+.++++++||||+++++++.+.+.
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP   83 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            34567778999999999999997652   1234589999876433 2334568899999999999999999999999999


Q ss_pred             EEEEEecCCCCCHhHhhhccC---------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCC
Q 047157          562 RLLVYELMPNGTLSNFLFHEG---------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTN  632 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~  632 (788)
                      .++||||+++|+|.+++....         ..+++..+..++.|++.||.|||++   +|+||||||+||+++     .+
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~-----~~  155 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVA-----HD  155 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEc-----CC
Confidence            999999999999999996432         2346778889999999999999999   999999999999998     78


Q ss_pred             CcEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccch
Q 047157          633 YMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVD  710 (788)
Q Consensus       633 ~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~  710 (788)
                      +.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||......+      
T Consensus       156 ~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~------  229 (288)
T cd05061         156 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ------  229 (288)
T ss_pred             CcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH------
Confidence            89999999998865332221 1122345678999999998899999999999999999998 778886432111      


Q ss_pred             hhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          711 IVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       711 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                        .   . .....+.....         .......+.+++.+||+.||++|||+.++++.|++...
T Consensus       230 --~---~-~~~~~~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~  280 (288)
T cd05061         230 --V---L-KFVMDGGYLDQ---------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH  280 (288)
T ss_pred             --H---H-HHHHcCCCCCC---------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcC
Confidence              0   0 11111111100         11223678899999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=1.3e-34  Score=308.58  Aligned_cols=264  Identities=26%  Similarity=0.377  Sum_probs=203.3

Q ss_pred             HhhcccccccccccceEEEEEEeccC--------------cceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKD--------------TQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRL  552 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~--------------~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~  552 (788)
                      ..+.+.++||+|+||.||++......              ....|++|.+.... ....+.+.+|++++++++||||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   84 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL   84 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            45677899999999999999875322              23468999987543 3456789999999999999999999


Q ss_pred             eeEEecCCeEEEEEecCCCCCHhHhhhccC----------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcE
Q 047157          553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEG----------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNV  622 (788)
Q Consensus       553 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  622 (788)
                      ++++..++..++|+|++++++|.+++....          ..+++..++.++.|++.||+|||+.   +|+|+||||+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~Ni  161 (296)
T cd05051          85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRNC  161 (296)
T ss_pred             EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhce
Confidence            999999999999999999999999996543          2678999999999999999999998   999999999999


Q ss_pred             EeccCCCCCCCcEEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh--CCCCCCc
Q 047157          623 LLDLKTLDTNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC--GRRHIEL  699 (788)
Q Consensus       623 ll~~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt--g~~p~~~  699 (788)
                      +++     .++.++|+|||++........ .......++..|+|||.+.+..++.++||||||+++|||++  +..||..
T Consensus       162 li~-----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~  236 (296)
T cd05051         162 LVG-----KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEH  236 (296)
T ss_pred             eec-----CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCC
Confidence            998     778999999999876533221 12223456778999999988889999999999999999998  6677754


Q ss_pred             cccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          700 SRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                      .....        .................      .......++++.+++.+||+.||++|||+.||++.|+.
T Consensus       237 ~~~~~--------~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~  296 (296)
T cd05051         237 LTDQQ--------VIENAGHFFRDDGRQIY------LPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR  296 (296)
T ss_pred             cChHH--------HHHHHHhcccccccccc------CCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence            32111        11111111111111110      01111234678999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=7.3e-35  Score=315.73  Aligned_cols=255  Identities=20%  Similarity=0.202  Sum_probs=196.7

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.++||+|+||.||++..+  ..+..+|+|.+.+..   ......+.+|+.++..++|+||+++++.+.+.+..++|
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   79 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLK--NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLV   79 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEEC--CCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEE
Confidence            3566789999999999999886  667789999986432   22344588899999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++|+|.+++.+....+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++..
T Consensus        80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~-----~~~~~kL~DfG~a~~  151 (332)
T cd05623          80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMD-----MNGHIRLADFGSCLK  151 (332)
T ss_pred             EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEC-----CCCCEEEeecchhee
Confidence            999999999999977667789999999999999999999999   999999999999998     788999999999876


Q ss_pred             cCCCCCcccccccCCccccCccccc-----CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLR-----NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      .............||+.|+|||++.     ...++.++|||||||++|||++|+.||......+..            ..
T Consensus       152 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~------------~~  219 (332)
T cd05623         152 LMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY------------GK  219 (332)
T ss_pred             cccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHH------------HH
Confidence            5443333333457899999999986     346889999999999999999999999754321110            00


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCC--CCCCCHHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDP--NLRPSMKKVIHM  770 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP--~~RPt~~evl~~  770 (788)
                      .........   .+..  .......+.+++.+|+..++  ..|++++|++++
T Consensus       220 i~~~~~~~~---~p~~--~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         220 IMNHKERFQ---FPAQ--VTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             HhCCCcccc---CCCc--cccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            111000000   0000  01223556677777775544  447899999876

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=8.6e-35  Score=337.77  Aligned_cols=259  Identities=23%  Similarity=0.330  Sum_probs=201.2

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.++||+|+||.||+|...  .++..||+|++....   ....+++.+|++++++++||||+++++++.+.+..++|
T Consensus         3 rYeIi~~LGkGgfG~VYlA~d~--~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV   80 (932)
T PRK13184          3 RYDIIRLIGKGGMGEVYLAYDP--VCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT   80 (932)
T ss_pred             CeEEEEEEecCCCEEEEEEEEC--CCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence            3566789999999999999876  567799999986532   34456899999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhcc----------CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcE
Q 047157          566 YELMPNGTLSNFLFHE----------GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMA  635 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~----------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~  635 (788)
                      |||+++++|.+++...          ....++..++.++.||++||+|||++   +|+||||||+|||++     .++.+
T Consensus        81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd-----~dg~v  152 (932)
T PRK13184         81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLG-----LFGEV  152 (932)
T ss_pred             EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEc-----CCCCE
Confidence            9999999999998532          12345677889999999999999999   999999999999998     78899


Q ss_pred             EEeecCCccccCCCCC-----------------cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCC
Q 047157          636 KISDFGISKLLNKDQT-----------------RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIE  698 (788)
Q Consensus       636 kL~Dfg~a~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~  698 (788)
                      ||+|||++........                 .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.
T Consensus       153 KLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~  232 (932)
T PRK13184        153 VILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYR  232 (932)
T ss_pred             EEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence            9999999986521110                 01112468999999999999999999999999999999999999996


Q ss_pred             ccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-CHHHHHHHhhcCcC
Q 047157          699 LSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-SMKKVIHMLEGTLE  776 (788)
Q Consensus       699 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~evl~~L~~~~~  776 (788)
                      .........           .    .    .+............+..+.+++.+|++.||++|| +++++++.|+....
T Consensus       233 ~~~~~ki~~-----------~----~----~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq  292 (932)
T PRK13184        233 RKKGRKISY-----------R----D----VILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ  292 (932)
T ss_pred             Ccchhhhhh-----------h----h----hccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            532111100           0    0    0000000011112345678899999999999996 67777777766543

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=3.1e-35  Score=317.69  Aligned_cols=241  Identities=28%  Similarity=0.303  Sum_probs=189.6

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHH-HhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELK-IIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      ++||+|+||.||++...  .++..+|+|.+....   ....+.+..|.. +++.++||||+++++.+...+..++||||+
T Consensus         1 ~~lG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~   78 (325)
T cd05604           1 KVIGKGSFGKVLLAKRK--LDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFV   78 (325)
T ss_pred             CceeeCCCeEEEEEEEC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCC
Confidence            46899999999999876  667799999986542   223345566655 467789999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|..++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++......
T Consensus        79 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~-----~~~~~kL~DfG~~~~~~~~  149 (325)
T cd05604          79 NGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLD-----SQGHVVLTDFGLCKEGIAQ  149 (325)
T ss_pred             CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEEC-----CCCCEEEeecCCcccCCCC
Confidence            999999888644 5688999999999999999999999   999999999999998     7889999999998753221


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      . .......|++.|+|||.+.+..++.++|||||||++|||++|+.||......+.            ........+   
T Consensus       150 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~------------~~~~~~~~~---  213 (325)
T cd05604         150 S-DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEM------------YDNILHKPL---  213 (325)
T ss_pred             C-CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHH------------HHHHHcCCc---
Confidence            1 122345689999999999999999999999999999999999999975432111            011111110   


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI  768 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl  768 (788)
                           ...  ......+.+++.+|++.||.+||++++.+
T Consensus       214 -----~~~--~~~~~~~~~ll~~ll~~~p~~R~~~~~~~  245 (325)
T cd05604         214 -----VLR--PGASLTAWSILEELLEKDRQRRLGAKEDF  245 (325)
T ss_pred             -----cCC--CCCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence                 000  11235677899999999999999886433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=9.5e-35  Score=307.11  Aligned_cols=262  Identities=25%  Similarity=0.367  Sum_probs=205.6

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccC--cceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEec-CC
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKD--TQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSE-ED  560 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~--~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~  560 (788)
                      +....+.+.++||+|+||.||+|......  ....|++|.+.... ....+.+.+|+.++++++||||+++++++.. ..
T Consensus         3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~   82 (280)
T cd05043           3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE   82 (280)
T ss_pred             cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence            34556778899999999999999986321  35789999886542 4446778999999999999999999998766 56


Q ss_pred             eEEEEEecCCCCCHhHhhhccC-------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCC
Q 047157          561 KRLLVYELMPNGTLSNFLFHEG-------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNY  633 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~  633 (788)
                      ..++++||+++++|.+++....       ..+++..++.++.||+.||+|||+.   +++|+||||+||+++     +++
T Consensus        83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~-----~~~  154 (280)
T cd05043          83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVID-----EEL  154 (280)
T ss_pred             CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEc-----CCC
Confidence            7899999999999999986532       4578999999999999999999998   999999999999998     778


Q ss_pred             cEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchh
Q 047157          634 MAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDI  711 (788)
Q Consensus       634 ~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~  711 (788)
                      .+||+|||+++.+...... ......++..|+|||.+.+..++.++||||||+++||+++ |+.||......+       
T Consensus       155 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-------  227 (280)
T cd05043         155 QVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE-------  227 (280)
T ss_pred             cEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH-------
Confidence            9999999999865432221 1122345678999999998899999999999999999998 999986532211       


Q ss_pred             hhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          712 VLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       712 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                       ...+    ...+ .      .+.  ......+.+.+++.+||+.||++|||+.+|++.|+.+.
T Consensus       228 -~~~~----~~~~-~------~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~  277 (280)
T cd05043         228 -MAAY----LKDG-Y------RLA--QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH  277 (280)
T ss_pred             -HHHH----HHcC-C------CCC--CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence             1111    1111 0      000  01122456889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-34  Score=312.81  Aligned_cols=202  Identities=25%  Similarity=0.274  Sum_probs=174.2

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||.||++...  .++..||+|.+.+..   ....+.+.+|+.++..++|+||+++++++.+++..++|
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   79 (331)
T cd05597           2 DFEILKVIGRGAFGEVAVVKMK--NTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLV   79 (331)
T ss_pred             CceEEEEEEecCCeEEEEEEEC--CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEE
Confidence            3567789999999999999886  567799999986422   23345688999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++.+....+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||++..
T Consensus        80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~-----~~~~~kl~Dfg~~~~  151 (331)
T cd05597          80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLD-----KNGHIRLADFGSCLR  151 (331)
T ss_pred             EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEEC-----CCCCEEEEECCceee
Confidence            999999999999976667789999999999999999999999   999999999999998     788999999999876


Q ss_pred             cCCCCCcccccccCCccccCcccccC-----CCCCccCcchhhHHHHHHHHhCCCCCCcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRN-----VPVTTKVDVFSFGVMLLEIICGRRHIELS  700 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~k~DVwSlGvil~elltg~~p~~~~  700 (788)
                      .............||+.|+|||++..     ..++.++|||||||++|||++|+.||...
T Consensus       152 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~  211 (331)
T cd05597         152 LLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE  211 (331)
T ss_pred             cCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence            54433333333568999999999863     45788999999999999999999999754

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=6.2e-35  Score=321.47  Aligned_cols=266  Identities=23%  Similarity=0.265  Sum_probs=197.3

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCC-----eEE
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED-----KRL  563 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~~~  563 (788)
                      .+.+.||+|+||.||++...  .++..||+|++....  ....+++.+|+++++.++||||+++++++...+     ..+
T Consensus         3 ~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           3 EPDRPIGYGAFGVVWSVTDP--RDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             cccceeeeCCCEEEEEEEEC--CCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            45688999999999999876  567799999886432  234567889999999999999999999998776     789


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +|+||+. ++|.+.+.. ...+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++
T Consensus        81 lv~e~~~-~~l~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~-----~~~~~kL~Dfg~a  150 (372)
T cd07853          81 VVTELMQ-SDLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVN-----SNCVLKICDFGLA  150 (372)
T ss_pred             EEeeccc-cCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEEC-----CCCCEEeccccce
Confidence            9999996 578887744 35688999999999999999999999   999999999999998     7889999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh-----hHH--
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV-----LSD--  715 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~-----~~~--  715 (788)
                      ...............++..|+|||.+.+. .++.++|||||||++|||++|+.||...............     ...  
T Consensus       151 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~  230 (372)
T cd07853         151 RVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMR  230 (372)
T ss_pred             eecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence            86544333333345678899999998764 5789999999999999999999999765432211100000     000  


Q ss_pred             ----HHHHHhhcccccc-cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          716 ----WVISCMLSRNLQV-LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       716 ----~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                          ............. ....  .........+.+.+++.+||+.||++|||++|++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         231 SACEGARAHILRGPHKPPSLPV--LYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             HhhHHHHHHHHhCCCCCCchHH--hcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence                0000000000000 0000  000001124578899999999999999999999974

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1e-34  Score=309.34  Aligned_cols=250  Identities=24%  Similarity=0.325  Sum_probs=201.3

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      +|.+.+.||+|++|.||+|...  ..+..|++|.+........+.+.+|+.+++.++||||+++++.+......++||||
T Consensus        21 ~y~~~~~lg~g~~~~v~~~~~~--~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~   98 (296)
T cd06654          21 KYTRFEKIGQGASGTVYTAMDV--ATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (296)
T ss_pred             ceeeEEEecCCCCeEEEEEEEC--CCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence            4556688999999999999875  56678999998765555567889999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++++|.+++..  ..+++.++..++.|++.||.|||+.   +|+|+||||+||+++     .++.+||+|||++.....
T Consensus        99 ~~~~~L~~~~~~--~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~-----~~~~~kl~dfg~~~~~~~  168 (296)
T cd06654          99 LAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLG-----MDGSVKLTDFGFCAQITP  168 (296)
T ss_pred             cCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEc-----CCCCEEECccccchhccc
Confidence            999999999853  3578899999999999999999999   999999999999998     778999999999876543


Q ss_pred             CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      ... ......+++.|+|||.+.+..++.++||||||+++|+|++|+.||........          +. .....     
T Consensus       169 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~----------~~-~~~~~-----  231 (296)
T cd06654         169 EQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA----------LY-LIATN-----  231 (296)
T ss_pred             ccc-ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh----------HH-HHhcC-----
Confidence            221 12234678899999999988899999999999999999999999965422110          00 00000     


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                         ..+...........+.+++.+||+.||++|||++|+++.
T Consensus       232 ---~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         232 ---GTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             ---CCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence               001111112334567889999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=7.9e-35  Score=308.13  Aligned_cols=269  Identities=24%  Similarity=0.390  Sum_probs=207.1

Q ss_pred             HhhcccccccccccceEEEEEEec--cCcceeeeeeecccchHH-HHHHHHHHHHHhcCCCccccceEeeEEec--CCeE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRL--KDTQIEIAVKKLEKDIEK-TNEEFMTELKIIGRTHHKNLVRLLGFCSE--EDKR  562 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~--~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~  562 (788)
                      ..+.+.+.||+|+||.||++.+..  ...+..+|||.+...... ..+.+.+|++++++++||||+++++++..  ....
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            345567899999999999998752  245678999998765443 56789999999999999999999999877  5688


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||+++++|.+++......+++..+..++.|++.||+|||+.   +++|+||||+||+++     .++.++|+|||.
T Consensus        84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~-----~~~~~~l~dfg~  155 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVE-----SEDLVKISDFGL  155 (284)
T ss_pred             EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEc-----CCCCEEEccccc
Confidence            999999999999999977666789999999999999999999998   999999999999998     778999999999


Q ss_pred             ccccCCCCCcc--cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCcccccccc----ccchhhhHHH
Q 047157          643 SKLLNKDQTRT--DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEES----EEVDIVLSDW  716 (788)
Q Consensus       643 a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~----~~~~~~~~~~  716 (788)
                      +..........  .....++..|+|||.+.+..++.++||||||+++|||++|+.|+.........    ..........
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  235 (284)
T cd05038         156 AKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRL  235 (284)
T ss_pred             ccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHH
Confidence            98765332211  11223456799999998889999999999999999999999998643221100    0000000010


Q ss_pred             HHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          717 VISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       717 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                       .....         .............++.+++.+||+.+|++||||.||+++|+++
T Consensus       236 -~~~~~---------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         236 -LELLK---------EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             -HHHHH---------cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence             01111         1111111122336788999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=1.5e-34  Score=311.36  Aligned_cols=201  Identities=21%  Similarity=0.309  Sum_probs=162.7

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEec--CCeEEEEEecCC
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE--EDKRLLVYELMP  570 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~lV~e~~~  570 (788)
                      .++||+|+||+||+|.......+..+|+|.+....  ....+.+|++++++++||||+++++++..  +...++|+||+.
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            36899999999999987644566789999986532  23457789999999999999999998854  456899999985


Q ss_pred             CCCHhHhhhcc--------CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          571 NGTLSNFLFHE--------GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       571 ~gsL~~~l~~~--------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                       ++|.+++...        ...+++..+..++.||+.||.|||++   +|+||||||+|||++... ...+.+||+|||+
T Consensus        84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~-~~~~~~kl~DfG~  158 (317)
T cd07868          84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEG-PERGRVKIADMGF  158 (317)
T ss_pred             -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCC-CCcCcEEEeecCc
Confidence             5888776422        23478889999999999999999999   999999999999995321 1567899999999


Q ss_pred             ccccCCCCC--cccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCcc
Q 047157          643 SKLLNKDQT--RTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELS  700 (788)
Q Consensus       643 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~  700 (788)
                      +........  .......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus       159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~  219 (317)
T cd07868         159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence            987643322  12234568999999999876 45899999999999999999999999754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=4.9e-35  Score=315.70  Aligned_cols=238  Identities=28%  Similarity=0.314  Sum_probs=187.4

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHH-HhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELK-IIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      ++||+|+||.||+|...  .++..||+|.+.+..   ......+..|.. +++.++||||+++++++.+.+..++||||+
T Consensus         1 ~~lg~G~~g~Vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~   78 (321)
T cd05603           1 KVIGKGSFGKVLLAKRK--SDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYV   78 (321)
T ss_pred             CeeeeCCCEEEEEEEEC--CCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCC
Confidence            46899999999999886  667799999986542   223345555654 578899999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|...+... ..+.+..+..++.||+.||.|||+.   +|+||||||+||+++     .++.+||+|||++......
T Consensus        79 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~-----~~~~~kl~Dfg~~~~~~~~  149 (321)
T cd05603          79 NGGELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLD-----SQGHVVLTDFGLCKEGVEP  149 (321)
T ss_pred             CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEEC-----CCCCEEEccCCCCccCCCC
Confidence            999999888544 5677888889999999999999998   999999999999998     7889999999998753222


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      . .......|++.|+|||.+.+..++.++|||||||++|||++|+.||...+....            ........    
T Consensus       150 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~------------~~~i~~~~----  212 (321)
T cd05603         150 E-ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQM------------YDNILHKP----  212 (321)
T ss_pred             C-CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHH------------HHHHhcCC----
Confidence            1 122345689999999999998999999999999999999999999975422110            01111111    


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMK  765 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~  765 (788)
                          ...  +......+.+++.+||+.||++||++.
T Consensus       213 ----~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         213 ----LQL--PGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             ----CCC--CCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence                111  112245678899999999999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=1.1e-34  Score=310.95  Aligned_cols=269  Identities=24%  Similarity=0.331  Sum_probs=200.5

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      +.+.+.||+|+||.||++...  .++..+++|.+... .....+++.+|++++.+++||||+++++++.+++..++||||
T Consensus         3 ~~~~~~lg~G~~g~v~~~~~~--~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           3 FEKLGELGAGNGGVVTKVLHR--PSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             ceEEeeccCCCCeEEEEEEEc--CCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            556789999999999999876  56778999988644 234456788999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++++|.+++.+. ..+++..+..++.||++||.|||+.  .+++|+||||+|||++     .++.+||+|||++.....
T Consensus        81 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~-----~~~~~~l~dfg~~~~~~~  152 (308)
T cd06615          81 MDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVN-----SRGEIKLCDFGVSGQLID  152 (308)
T ss_pred             cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEe-----cCCcEEEccCCCcccccc
Confidence            9999999999655 5678899999999999999999973  2899999999999998     778899999999876533


Q ss_pred             CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHH---------
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVIS---------  719 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---------  719 (788)
                      ..   .....++..|+|||.+.+..++.++||||||+++|+|++|+.||......................         
T Consensus       153 ~~---~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (308)
T cd06615         153 SM---ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGH  229 (308)
T ss_pred             cc---cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCC
Confidence            21   123567899999999988889999999999999999999999986443211100000000000000         


Q ss_pred             -------HhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          720 -------CMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       720 -------~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                             ..........................+.+++.+||+.||++|||++||+++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~  288 (308)
T cd06615         230 PPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP  288 (308)
T ss_pred             CCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence                   0000000000000000011111345688999999999999999999999763

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.1e-35  Score=286.77  Aligned_cols=249  Identities=25%  Similarity=0.383  Sum_probs=200.9

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccc--------hHHHHHHHHHHHHHhcCC-CccccceEeeEEecCC
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--------IEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEED  560 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--------~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~  560 (788)
                      |.-.+.||+|..++|-+..++  .++...|+|++...        .....++-.+|+.+|+++ .||+|+++.++++.+.
T Consensus        19 y~pkeilgrgvss~vrRci~k--~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s   96 (411)
T KOG0599|consen   19 YEPKEILGRGVSSVVRRCIHK--ETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA   96 (411)
T ss_pred             cChHHHhcccchhhhhhhhhc--ccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence            444678999999999999887  67778999988532        234556778899999998 6999999999999999


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ..++|+|.|+.|.|.++|... -.++++...+|++|+.+|+.|||.+   +||||||||+|||++     ++.++||+||
T Consensus        97 F~FlVFdl~prGELFDyLts~-VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILld-----dn~~i~isDF  167 (411)
T KOG0599|consen   97 FVFLVFDLMPRGELFDYLTSK-VTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLD-----DNMNIKISDF  167 (411)
T ss_pred             hhhhhhhhcccchHHHHhhhh-eeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeec-----cccceEEecc
Confidence            999999999999999999544 6788899999999999999999999   999999999999999     9999999999


Q ss_pred             CCccccCCCCCcccccccCCccccCccccc------CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLR------NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS  714 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~  714 (788)
                      |++..+.+....  ...+||++|+|||.++      ...|+...|+|++|||+|.|+.|..||.....        +.+ 
T Consensus       168 GFa~~l~~GekL--relCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ--------mlM-  236 (411)
T KOG0599|consen  168 GFACQLEPGEKL--RELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ--------MLM-  236 (411)
T ss_pred             ceeeccCCchhH--HHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH--------HHH-
Confidence            999988765433  3579999999999884      23578899999999999999999999964311        111 


Q ss_pred             HHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          715 DWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       715 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                         ...+.++..+-    ...  .=.+......+|+.+||+.||.+|.|++|+++
T Consensus       237 ---LR~ImeGkyqF----~sp--eWadis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  237 ---LRMIMEGKYQF----RSP--EWADISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             ---HHHHHhccccc----CCc--chhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence               11122222111    000  11234456778999999999999999999986

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=7.4e-35  Score=317.08  Aligned_cols=262  Identities=28%  Similarity=0.427  Sum_probs=200.1

Q ss_pred             HHhhcccccccccccceEEEEEEec---cCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecC-C
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEE-D  560 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~-~  560 (788)
                      ...+.+.+.||+|+||.||+|....   ...++.||||.++... ......+.+|+.++.++ +||||+++++++... .
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   85 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence            4567788999999999999997531   2346689999987533 33456788999999999 689999999988654 5


Q ss_pred             eEEEEEecCCCCCHhHhhhccC----------------------------------------------------------
Q 047157          561 KRLLVYELMPNGTLSNFLFHEG----------------------------------------------------------  582 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~----------------------------------------------------------  582 (788)
                      ..++||||+++|+|.+++....                                                          
T Consensus        86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (343)
T cd05103          86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  165 (343)
T ss_pred             ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence            6789999999999999986421                                                          


Q ss_pred             --------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCc-c
Q 047157          583 --------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR-T  653 (788)
Q Consensus       583 --------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~-~  653 (788)
                              ..+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||++......... .
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~-----~~~~~kl~dfg~~~~~~~~~~~~~  237 (343)
T cd05103         166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLS-----ENNVVKICDFGLARDIYKDPDYVR  237 (343)
T ss_pred             hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEc-----CCCcEEEEecccccccccCcchhh
Confidence                    2357788889999999999999999   999999999999998     7789999999999865332211 1


Q ss_pred             cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcccccccccC
Q 047157          654 DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSH  732 (788)
Q Consensus       654 ~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  732 (788)
                      .....++..|+|||.+.+..++.++||||||+++|||++ |..||........       .    ......+....    
T Consensus       238 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-------~----~~~~~~~~~~~----  302 (343)
T cd05103         238 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-------F----CRRLKEGTRMR----  302 (343)
T ss_pred             cCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-------H----HHHHhccCCCC----
Confidence            122345678999999988899999999999999999997 8888864321110       0    00111111000    


Q ss_pred             CCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          733 DPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       733 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      .+.     .....+.+++..||+.||++|||+.||+++|+.+.+
T Consensus       303 ~~~-----~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         303 APD-----YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             CCC-----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            011     123467889999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=1.3e-34  Score=303.93  Aligned_cols=249  Identities=27%  Similarity=0.377  Sum_probs=196.3

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCC
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      ...||+|+||.||+|...  .++..|++|.+........+.+.+|++++++++|+||+++++++..++..++|+||++++
T Consensus        13 ~~~lg~g~~g~v~~~~~~--~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   90 (268)
T cd06624          13 RVVLGKGTYGIVYAARDL--STQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGG   90 (268)
T ss_pred             eEEEecCCceEEEEeEec--CCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCC
Confidence            368999999999999876  567789999987666666778999999999999999999999999999999999999999


Q ss_pred             CHhHhhhccCCCC--CHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCC
Q 047157          573 TLSNFLFHEGQRP--GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ  650 (788)
Q Consensus       573 sL~~~l~~~~~~~--~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~  650 (788)
                      +|.+++......+  ++..+..++.||+.||+|||++   +|+||||||+||+++.    ..+.++|+|||.+.......
T Consensus        91 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~----~~~~~~l~dfg~~~~~~~~~  163 (268)
T cd06624          91 SLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNT----YSGVVKISDFGTSKRLAGIN  163 (268)
T ss_pred             CHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcC----CCCeEEEecchhheecccCC
Confidence            9999997654444  7888889999999999999998   9999999999999972    35689999999987654322


Q ss_pred             CcccccccCCccccCcccccCC--CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          651 TRTDTNMRGTMGYVAPEWLRNV--PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       651 ~~~~~~~~gt~~y~aPE~~~~~--~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      . ......++..|+|||++...  .++.++||||||+++|+|++|+.||........        ..+...         
T Consensus       164 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~--------~~~~~~---------  225 (268)
T cd06624         164 P-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA--------AMFKVG---------  225 (268)
T ss_pred             C-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh--------hHhhhh---------
Confidence            2 12234578899999998654  378899999999999999999999864311100        000000         


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .....+.  .+....+++.+++.+||+.+|++|||+.|++++
T Consensus       226 ~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         226 MFKIHPE--IPESLSAEAKNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             hhccCCC--CCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence            0000011  111234567889999999999999999999864

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.1e-34  Score=323.91  Aligned_cols=193  Identities=24%  Similarity=0.293  Sum_probs=166.8

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .|.+.+.||+|+||.||++.+.  ..+..||||....      ..+.+|++++++++||||+++++++..++..++|||+
T Consensus       170 gy~i~~~Lg~G~~G~Vy~a~~~--~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~  241 (461)
T PHA03211        170 GFAIHRALTPGSEGCVFESSHP--DYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK  241 (461)
T ss_pred             CeEEEEEEccCCCeEEEEEEEC--CCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            4666789999999999999886  5667899996432      3456899999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      + .++|.+++......+++.+++.|+.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+++....
T Consensus       242 ~-~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~-----~~~~vkL~DFGla~~~~~  312 (461)
T PHA03211        242 Y-RSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVN-----GPEDICLGDFGAACFARG  312 (461)
T ss_pred             c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEEC-----CCCCEEEcccCCceeccc
Confidence            9 4789998876666799999999999999999999999   999999999999998     778899999999986543


Q ss_pred             CCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCC
Q 047157          649 DQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIE  698 (788)
Q Consensus       649 ~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~  698 (788)
                      .... ......||..|+|||++.+..++.++|||||||+||||++|..++.
T Consensus       313 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf  363 (461)
T PHA03211        313 SWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF  363 (461)
T ss_pred             ccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence            2221 1223568999999999999999999999999999999999887653

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=1.4e-34  Score=311.07  Aligned_cols=260  Identities=28%  Similarity=0.436  Sum_probs=202.5

Q ss_pred             HHhhcccccccccccceEEEEEEec-----cCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecC
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRL-----KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEE  559 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~-----~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~  559 (788)
                      ...+.+.+.||+|+||.||++....     ......+++|.+.... ......+.+|+++++++ +||||+++++++.+.
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE   90 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence            3456678999999999999997531     1234578999887532 34456788999999999 699999999999999


Q ss_pred             CeEEEEEecCCCCCHhHhhhccC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEe
Q 047157          560 DKRLLVYELMPNGTLSNFLFHEG---------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLL  624 (788)
Q Consensus       560 ~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll  624 (788)
                      ...++||||+++++|.+++....               ..+++.++..++.||+.||.|||++   +|+||||||+|||+
T Consensus        91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill  167 (314)
T cd05099          91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLV  167 (314)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEE
Confidence            99999999999999999996532               3478899999999999999999998   99999999999999


Q ss_pred             ccCCCCCCCcEEEeecCCccccCCCCCcc-cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCcccc
Q 047157          625 DLKTLDTNYMAKISDFGISKLLNKDQTRT-DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRV  702 (788)
Q Consensus       625 ~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~  702 (788)
                      +     .++.+||+|||.++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus       168 ~-----~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~  242 (314)
T cd05099         168 T-----EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV  242 (314)
T ss_pred             c-----CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence            8     77899999999998664322211 111234467999999998899999999999999999999 8888865422


Q ss_pred             ccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          703 EEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       703 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      .+.            .........       ..  ........+.+++.+||+.||++|||+.|+++.|+++.
T Consensus       243 ~~~------------~~~~~~~~~-------~~--~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~  294 (314)
T cd05099         243 EEL------------FKLLREGHR-------MD--KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL  294 (314)
T ss_pred             HHH------------HHHHHcCCC-------CC--CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            111            111111110       00  01122456778999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-34  Score=302.55  Aligned_cols=253  Identities=23%  Similarity=0.285  Sum_probs=205.1

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .+.+.+.||+|+||.||++...  .++..+++|.+........+.+.+|++++++++||||+++++++.+.+..+++|||
T Consensus         4 ~~~~~~~l~~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           4 DYELIQRIGSGTYGDVYKARDI--ATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ceEEEEEecCCCceEEEEeEec--CCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            4567789999999999999886  45668999998766555678899999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++++|.+++......+++.++..++.|++.||.|||++   +|+|+||+|+||+++     .++.+||+|||.+.....
T Consensus        82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~-----~~~~~~l~d~g~~~~~~~  153 (262)
T cd06613          82 CGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLT-----EDGDVKLADFGVSAQLTA  153 (262)
T ss_pred             CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEEC-----CCCCEEECccccchhhhh
Confidence            999999999877656789999999999999999999998   999999999999998     778899999999886543


Q ss_pred             CCCcccccccCCccccCcccccCC---CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNV---PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~---~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ... ......++..|+|||.+...   .++.++||||||+++|||++|+.||.........       ..     .....
T Consensus       154 ~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~-------~~-----~~~~~  220 (262)
T cd06613         154 TIA-KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL-------FL-----ISKSN  220 (262)
T ss_pred             hhh-ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH-------HH-----HHhcc
Confidence            221 12234678899999999776   8899999999999999999999999654211100       00     00000


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      +     ..+...........+.+++.+||+.+|.+|||+++|+.
T Consensus       221 ~-----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         221 F-----PPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             C-----CCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            0     01111122344567899999999999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=7.7e-35  Score=303.41  Aligned_cols=251  Identities=27%  Similarity=0.477  Sum_probs=200.0

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .+.+.+.||+|+||.||++...   .+..+++|.+.... .....+.+|++++++++||||+++++++......++|+||
T Consensus         5 ~~~~~~~ig~g~~g~v~~~~~~---~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd05112           5 ELTLVQEIGSGQFGLVWLGYWL---EKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEF   80 (256)
T ss_pred             HeEEEeeecCcccceEEEEEEe---CCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEc
Confidence            4566789999999999999874   34579999886542 2345788999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++++|.+++......+++..+..++.|++.||+|||+.   +++|+||||+||+++     .++.+||+|||.+.....
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~-----~~~~~~l~d~g~~~~~~~  152 (256)
T cd05112          81 MEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVG-----ENQVVKVSDFGMTRFVLD  152 (256)
T ss_pred             CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEc-----CCCeEEECCCcceeeccc
Confidence            999999999977666788999999999999999999998   999999999999998     778999999999876543


Q ss_pred             CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      ..........++..|+|||.+.+..++.++||||||+++|||++ |+.||......+.           . ...... ..
T Consensus       153 ~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~-----------~-~~~~~~-~~  219 (256)
T cd05112         153 DQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEV-----------V-ETINAG-FR  219 (256)
T ss_pred             CcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH-----------H-HHHhCC-CC
Confidence            32222222335678999999998899999999999999999998 8999864321110           0 001110 00


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                       ..  .+.     ...+.+.+++.+||+.+|++|||+.|++++|.
T Consensus       220 -~~--~~~-----~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         220 -LY--KPR-----LASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             -CC--CCC-----CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence             00  011     12467889999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=4.1e-34  Score=304.87  Aligned_cols=264  Identities=25%  Similarity=0.348  Sum_probs=200.6

Q ss_pred             HhhcccccccccccceEEEEEEec--------------cCcceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRL--------------KDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRL  552 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~--------------~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~  552 (788)
                      ..+.+.+.||+|+||.||++....              ......+|+|.+... .....+++.+|+++++.++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            446778899999999999985431              123457999998754 24456789999999999999999999


Q ss_pred             eeEEecCCeEEEEEecCCCCCHhHhhhccC----------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcE
Q 047157          553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEG----------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNV  622 (788)
Q Consensus       553 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  622 (788)
                      ++++...+..++||||+++++|.+++....          ..+++.++..++.||+.||+|||+.   +++|+||||+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Ni  161 (296)
T cd05095          85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNC  161 (296)
T ss_pred             EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheE
Confidence            999999999999999999999999986532          2356788999999999999999999   999999999999


Q ss_pred             EeccCCCCCCCcEEEeecCCccccCCCCCcc-cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh--CCCCCCc
Q 047157          623 LLDLKTLDTNYMAKISDFGISKLLNKDQTRT-DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC--GRRHIEL  699 (788)
Q Consensus       623 ll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt--g~~p~~~  699 (788)
                      |++     .++.++|+|||++..+....... .....++..|+|||......++.++||||||+++|||++  |..||..
T Consensus       162 li~-----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~  236 (296)
T cd05095         162 LVG-----KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQ  236 (296)
T ss_pred             EEc-----CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccc
Confidence            998     77899999999998654332211 122334678999999888889999999999999999998  6678764


Q ss_pred             cccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          700 SRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                      ....+...        ............... +.     .......+.+++.+||+.||++||++.||++.|+.
T Consensus       237 ~~~~~~~~--------~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         237 LSDEQVIE--------NTGEFFRDQGRQVYL-PK-----PALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE  296 (296)
T ss_pred             cChHHHHH--------HHHHHHhhccccccC-CC-----CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            32221110        000111111000000 00     11223678899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=2.3e-34  Score=301.62  Aligned_cols=258  Identities=22%  Similarity=0.335  Sum_probs=205.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc---hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD---IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||.||+|...  .++..+++|.++..   .....+.+.+|++++++++|+||+++++++.+.+..++|
T Consensus         3 ~y~~~~~lg~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv   80 (267)
T cd08224           3 NFKIEKKIGKGQFSVVYKAICL--LDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIV   80 (267)
T ss_pred             ceeeeeeeccCCceEEEEEEEc--CCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            4667889999999999999886  56778999987532   233467889999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          566 YELMPNGTLSNFLFH---EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      |||+++++|.+++..   ....+++.+++.++.|++.||.|||+.   +|+|+||+|+||+++     .++.++|+|||+
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~-----~~~~~~l~d~~~  152 (267)
T cd08224          81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFIT-----ATGVVKLGDLGL  152 (267)
T ss_pred             EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEEC-----CCCcEEEeccce
Confidence            999999999999854   234578999999999999999999999   999999999999998     778999999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      +......... .....++..|+|||.+.+..++.++||||||+++|+|++|+.||......         ..+. .....
T Consensus       153 ~~~~~~~~~~-~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---------~~~~-~~~~~  221 (267)
T cd08224         153 GRFFSSKTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---------LYSL-CKKIE  221 (267)
T ss_pred             eeeccCCCcc-cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc---------HHHH-Hhhhh
Confidence            8765433221 22345788999999999889999999999999999999999998643211         0010 01111


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      .+...        ..........+.+++.+||+.+|++|||+.+|+++|+++.
T Consensus       222 ~~~~~--------~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         222 KCDYP--------PLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             cCCCC--------CCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            11110        0111134457788999999999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.5e-34  Score=306.24  Aligned_cols=265  Identities=24%  Similarity=0.342  Sum_probs=206.1

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      +....+.+.+.||+|+||+||++...  ..+..+++|.+.... ....+.+.+|+++++.++||||+++++++...+..+
T Consensus         2 l~~~~~~~~~~ig~g~~g~v~~~~~~--~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   79 (284)
T cd06620           2 LRNEDLETISDLGAGNGGSVSKVKHI--PTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNIC   79 (284)
T ss_pred             ccHHHHHHHHHcCCCCCeEEEEEEEc--CCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEE
Confidence            34456777899999999999999876  567789999876432 445678999999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +||||+++++|.+++... ..+++..+..++.+++.||.|||+.  .+++|+||||+||+++     .++.++|+|||++
T Consensus        80 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~-----~~~~~~l~d~gl~  151 (284)
T cd06620          80 MCMEFMDCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVN-----SRGQIKLCDFGVS  151 (284)
T ss_pred             EEEecCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEEC-----CCCcEEEccCCcc
Confidence            999999999999988653 4688999999999999999999973  2899999999999998     7789999999998


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      .......   .....++..|+|||.+.+..++.++||||||+++|+|++|+.||......+.................  
T Consensus       152 ~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--  226 (284)
T cd06620         152 GELINSI---ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIV--  226 (284)
T ss_pred             cchhhhc---cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHh--
Confidence            7543221   12346889999999998889999999999999999999999999754332111111111111111111  


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                             ...+...........+.+++.+||+.||++|||++||+++.
T Consensus       227 -------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         227 -------QEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             -------hccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence                   11111111122445688899999999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=9e-35  Score=313.67  Aligned_cols=241  Identities=27%  Similarity=0.342  Sum_probs=191.9

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCC-ccccceEeeEEecCCeEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lV  565 (788)
                      +++.+.||+|+||+||++...  .++..||+|.+.+..   ....+.+..|..++..+. |++|+++++++.+.+..++|
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv   79 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERK--GTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFV   79 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEEC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEE
Confidence            456789999999999999876  667799999987542   233456778888888875 67888999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++... ..+++.++..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++..
T Consensus        80 ~Ey~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~-----~~~~ikL~Dfg~~~~  150 (323)
T cd05615          80 MEYVNGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLD-----SEGHIKIADFGMCKE  150 (323)
T ss_pred             EcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEEC-----CCCCEEEeccccccc
Confidence            9999999999998654 4688999999999999999999999   999999999999998     788999999999875


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ...... ......|++.|+|||++.+..++.++||||||+++|||++|+.||........            ........
T Consensus       151 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~------------~~~i~~~~  217 (323)
T cd05615         151 HMVDGV-TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL------------FQSIMEHN  217 (323)
T ss_pred             cCCCCc-cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHH------------HHHHHhCC
Confidence            432221 12235689999999999999999999999999999999999999975432110            01111111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSM  764 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~  764 (788)
                      .        ..  .......+.+++.+||+.||++|++.
T Consensus       218 ~--------~~--p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         218 V--------SY--PKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             C--------CC--CccCCHHHHHHHHHHcccCHhhCCCC
Confidence            1        00  01123567889999999999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=4.7e-35  Score=317.24  Aligned_cols=203  Identities=26%  Similarity=0.389  Sum_probs=175.5

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC-c-----cccceEeeEEecCCeE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-H-----KNLVRLLGFCSEEDKR  562 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h-----pniv~~~~~~~~~~~~  562 (788)
                      +|.+.+.||+|.||.|.++...  .+++.||||+++.. ..-..+...|+.+|..|+ |     -|+|+++++|...++.
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~--~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl  263 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDH--KTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL  263 (586)
T ss_pred             EEEEEEEecccccceeEEEEec--CCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence            5677899999999999999987  78889999999875 445567778999999986 4     4899999999999999


Q ss_pred             EEEEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          563 LLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      |||+|.+ ..+|.++|+.+ ...++...+..|+.||+.||.+||+.   +|||+||||+||||...   ....+||+|||
T Consensus       264 ciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~---~r~~vKVIDFG  336 (586)
T KOG0667|consen  264 CIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDP---KRSRIKVIDFG  336 (586)
T ss_pred             eeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccC---CcCceeEEecc
Confidence            9999999 56999999765 35678999999999999999999998   99999999999999743   34589999999


Q ss_pred             CccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccc
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEE  705 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~  705 (788)
                      .+........    ....+..|+|||++.+.+|+.+.||||||||+.||++|.+.|.+.+..++
T Consensus       337 SSc~~~q~vy----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQ  396 (586)
T KOG0667|consen  337 SSCFESQRVY----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQ  396 (586)
T ss_pred             cccccCCcce----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHH
Confidence            9987543322    35668899999999999999999999999999999999988877655443

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=1.3e-34  Score=314.14  Aligned_cols=264  Identities=28%  Similarity=0.428  Sum_probs=205.6

Q ss_pred             HHHHHhhcccccccccccceEEEEEEecc-----Ccceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEE
Q 047157          484 ELQEATKGFSKLVGTGSSGKVYRGILRLK-----DTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFC  556 (788)
Q Consensus       484 ~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~-----~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~  556 (788)
                      ++....+.+.+.||+|+||.||++.....     .....|++|.+.... ....+++.+|+++++++ +||||+++++++
T Consensus         8 ~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~   87 (334)
T cd05100           8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC   87 (334)
T ss_pred             ccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE
Confidence            34455678889999999999999976421     123478999887543 34457899999999999 799999999999


Q ss_pred             ecCCeEEEEEecCCCCCHhHhhhccC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCc
Q 047157          557 SEEDKRLLVYELMPNGTLSNFLFHEG---------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQN  621 (788)
Q Consensus       557 ~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~N  621 (788)
                      .+.+..++++||+++++|.+++....               ..+++.++..++.||+.||.|||++   +|+||||||+|
T Consensus        88 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~N  164 (334)
T cd05100          88 TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARN  164 (334)
T ss_pred             ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccccce
Confidence            99999999999999999999986532               3467889999999999999999998   99999999999


Q ss_pred             EEeccCCCCCCCcEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCc
Q 047157          622 VLLDLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIEL  699 (788)
Q Consensus       622 Ill~~~~~~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~  699 (788)
                      ||++     .++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||..
T Consensus       165 ill~-----~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~  239 (334)
T cd05100         165 VLVT-----EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG  239 (334)
T ss_pred             EEEc-----CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCC
Confidence            9998     7789999999999865432211 1122234567999999999999999999999999999998 8888865


Q ss_pred             cccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          700 SRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ....+.            ..........       .  ........+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus       240 ~~~~~~------------~~~~~~~~~~-------~--~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         240 IPVEEL------------FKLLKEGHRM-------D--KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             CCHHHH------------HHHHHcCCCC-------C--CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence            422111            0111111100       0  011234578899999999999999999999999997763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.1e-34  Score=321.17  Aligned_cols=266  Identities=21%  Similarity=0.294  Sum_probs=200.9

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      +....|.+.+.||+|+||.||++.......+..|++|.+...     +...+|++++++++||||+++++++......++
T Consensus        89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l  163 (392)
T PHA03207         89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCM  163 (392)
T ss_pred             hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence            334567888999999999999998765556678999988653     234589999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |||++. ++|.+++ .....+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++.
T Consensus       164 v~e~~~-~~l~~~l-~~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~-----~~~~~~l~DfG~a~  233 (392)
T PHA03207        164 VMPKYK-CDLFTYV-DRSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLD-----EPENAVLGDFGAAC  233 (392)
T ss_pred             EehhcC-CCHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEc-----CCCCEEEccCcccc
Confidence            999985 6888888 3446789999999999999999999999   999999999999998     78899999999997


Q ss_pred             ccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          645 LLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       645 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........    +.. +......
T Consensus       234 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~----l~~-i~~~~~~  308 (392)
T PHA03207        234 KLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQ----LRS-IIRCMQV  308 (392)
T ss_pred             ccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHH----HHH-HHHHhcc
Confidence            65443222 22345789999999999999999999999999999999999999976543211100    000 0000000


Q ss_pred             cc-----------------ccccccC---CCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          724 RN-----------------LQVLVSH---DPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       724 ~~-----------------~~~l~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ..                 +.....+   .+...........+.+++.+||+.||++|||+.|++.+
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        309 HPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             CccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence            00                 0000000   00000011123467788999999999999999999875

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-34  Score=305.17  Aligned_cols=252  Identities=24%  Similarity=0.324  Sum_probs=203.0

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .|.+.+.||.|+||.||++...  .++..+++|.+........+.+.+|++++++++||||+++++.+..+...++||||
T Consensus         6 ~~~i~~~l~~g~~~~v~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           6 IWEIIGELGDGAFGKVYKAQHK--ETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             HHHHHHHhcCCCCceEEEEEEc--CCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            3666788999999999999886  46678999998766666677899999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++++|.+++.+.+..+++..+..++.|++.||.|||++   +|+|+||||+||+++     .++.++|+|||++.....
T Consensus        84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~-----~~~~~~l~d~g~~~~~~~  155 (280)
T cd06611          84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLT-----LDGDVKLADFGVSAKNKS  155 (280)
T ss_pred             cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEC-----CCCCEEEccCccchhhcc
Confidence            999999999977667789999999999999999999999   999999999999998     788999999998876533


Q ss_pred             CCCcccccccCCccccCccccc-----CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLR-----NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ... ......++..|+|||.+.     ...++.++||||||+++|||++|+.||........       .     .....
T Consensus       156 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~-------~-----~~~~~  222 (280)
T cd06611         156 TLQ-KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV-------L-----LKILK  222 (280)
T ss_pred             ccc-ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH-------H-----HHHhc
Confidence            221 122346788999999874     34577899999999999999999999975421110       0     00111


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ..       .+....+......+.+++..||+.+|++||++++|++.
T Consensus       223 ~~-------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         223 SE-------PPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             CC-------CCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            10       01111112234567889999999999999999999864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=1.5e-34  Score=306.95  Aligned_cols=258  Identities=26%  Similarity=0.388  Sum_probs=201.6

Q ss_pred             HHhhcccccccccccceEEEEEEec---cCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      ...+.+.+.||+|+||.||++....   ...+..|++|.+.... ....+++.+|+.++++++||||+++++++.+++..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            3446667899999999999998642   2345689999987543 34456799999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccC---------------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCc
Q 047157          563 LLVYELMPNGTLSNFLFHEG---------------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQN  621 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~---------------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~N  621 (788)
                      ++|+||+++++|.+++....                     ..+++..++.++.||+.||.|||++   +++||||||+|
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~n  160 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRN  160 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhh
Confidence            99999999999999996421                     2467888899999999999999998   99999999999


Q ss_pred             EEeccCCCCCCCcEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCc
Q 047157          622 VLLDLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIEL  699 (788)
Q Consensus       622 Ill~~~~~~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~  699 (788)
                      |+++     .++.++|+|||++......... .......+..|+|||.+.+..++.++||||||+++|||++ |..||..
T Consensus       161 il~~-----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~  235 (288)
T cd05050         161 CLVG-----ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYG  235 (288)
T ss_pred             eEec-----CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence            9998     7889999999998765332211 1122234667999999998899999999999999999997 8788854


Q ss_pred             cccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          700 SRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                      ....+           . ...........         .......++.+++.+||+.||++|||+.|+++.|++
T Consensus       236 ~~~~~-----------~-~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         236 MAHEE-----------V-IYYVRDGNVLS---------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             CCHHH-----------H-HHHHhcCCCCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            32211           0 01111111110         011234678889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=2.9e-34  Score=301.56  Aligned_cols=254  Identities=27%  Similarity=0.368  Sum_probs=188.9

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      ++||+|+||.||+|..........+++|.+.... ......+.+|+++++.++||||+++++.+.+....++||||++++
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            3689999999999976544455678999876433 344567889999999999999999999999999999999999999


Q ss_pred             CHhHhhhccC----CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          573 TLSNFLFHEG----QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       573 sL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +|.+++....    ...++.....++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||++.....
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~-----~~~~~kl~dfg~~~~~~~  152 (269)
T cd05042          81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLT-----ADLSVKIGDYGLALEQYP  152 (269)
T ss_pred             cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEec-----CCCcEEEecccccccccc
Confidence            9999996543    2346778889999999999999999   999999999999998     788999999999875433


Q ss_pred             CCCc-ccccccCCccccCccccc-------CCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHH
Q 047157          649 DQTR-TDTNMRGTMGYVAPEWLR-------NVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVIS  719 (788)
Q Consensus       649 ~~~~-~~~~~~gt~~y~aPE~~~-------~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~  719 (788)
                      .... ......++..|+|||++.       ...++.++||||||+++|||++ |..||......+.       +    ..
T Consensus       153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-------~----~~  221 (269)
T cd05042         153 EDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQV-------L----KQ  221 (269)
T ss_pred             chheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHH-------H----HH
Confidence            2211 112234567899999874       3456889999999999999999 7778764321110       0    00


Q ss_pred             HhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          720 CMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       720 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                      ..... ...+..  +  .........+.+++..|+ .||++|||++||++.|.
T Consensus       222 ~~~~~-~~~~~~--~--~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         222 VVREQ-DIKLPK--P--QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             Hhhcc-CccCCC--C--cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            01111 011111  1  111123345566777788 59999999999999873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=2.3e-34  Score=299.96  Aligned_cols=248  Identities=29%  Similarity=0.411  Sum_probs=196.9

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEe-cCCeEEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCS-EEDKRLLVY  566 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lV~  566 (788)
                      ..+.+.+.||+|+||.||++...    +..+++|.++...  ..+.+.+|+.++++++|+|++++++++. +++..++|+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~----~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~   79 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR----GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   79 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc----CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence            45677899999999999999763    4578999886532  3567899999999999999999999764 556789999


Q ss_pred             ecCCCCCHhHhhhccCC-CCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHEGQ-RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+++++|.+++.+... .+++..++.++.|++.||+|||++   +|+||||||+||+++     .++.+||+|||++..
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~-----~~~~~kl~dfg~~~~  151 (256)
T cd05082          80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVS-----EDNVAKVSDFGLTKE  151 (256)
T ss_pred             ECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEc-----CCCcEEecCCcccee
Confidence            99999999999976543 478999999999999999999999   999999999999998     788999999999875


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .....    .....+..|+|||++.+..++.++||||||+++|||++ |+.||......+.           . ......
T Consensus       152 ~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~-----------~-~~~~~~  215 (256)
T cd05082         152 ASSTQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-----------V-PRVEKG  215 (256)
T ss_pred             ccccC----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH-----------H-HHHhcC
Confidence            43322    12234568999999998899999999999999999997 8988864321110           0 001111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      . .      +  .........+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       216 ~-~------~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         216 Y-K------M--DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             C-C------C--CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            0 0      0  00112345678899999999999999999999999764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=1.6e-34  Score=303.17  Aligned_cols=254  Identities=21%  Similarity=0.292  Sum_probs=200.1

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      ..|.+.+.||+|+||.||+|...  .++..+++|.++.........+.+|+.+++.++||||+++++.+...+..++|+|
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e   86 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNV--NTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICME   86 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEc--CCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Confidence            35667789999999999999876  5677899999876555555678899999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++++|.+++... ..+++.++..++.|++.||.|||+.   +++|+||||+||+++     .++.+||+|||++....
T Consensus        87 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~-----~~~~~~l~dfg~~~~~~  157 (267)
T cd06645          87 FCGGGSLQDIYHVT-GPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLT-----DNGHVKLADFGVSAQIT  157 (267)
T ss_pred             ccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEC-----CCCCEEECcceeeeEcc
Confidence            99999999998654 4688999999999999999999999   999999999999998     77889999999987654


Q ss_pred             CCCCcccccccCCccccCccccc---CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ... .......|+..|+|||.+.   ...++.++||||||+++|||++|+.||........       .    . .....
T Consensus       158 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~-------~----~-~~~~~  224 (267)
T cd06645         158 ATI-AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-------L----F-LMTKS  224 (267)
T ss_pred             Ccc-cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh-------H----H-hhhcc
Confidence            322 2223356889999999874   45688999999999999999999999854321110       0    0 00000


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ...     .+.........+.+.+++.+||+.||++||++++|+++
T Consensus       225 ~~~-----~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         225 NFQ-----PPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             CCC-----CCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            000     00000111223567889999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.8e-34  Score=300.95  Aligned_cols=246  Identities=26%  Similarity=0.462  Sum_probs=190.6

Q ss_pred             ccccccccceEEEEEEeccC--------cceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          494 KLVGTGSSGKVYRGILRLKD--------TQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~--------~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      +.||+|+||.||+|.+....        ....+++|.+...... ...+.+|+.++++++||||+++++++.. ...++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            46899999999999987322        1145788877654333 6788999999999999999999999988 778999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCC--CCCcEEEeecCCc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD--TNYMAKISDFGIS  643 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~--~~~~~kL~Dfg~a  643 (788)
                      +||+++++|.+++......+++..+..++.||+.||+|||++   +|+||||||+||+++.+...  ....+||+|||++
T Consensus        79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a  155 (259)
T cd05037          79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP  155 (259)
T ss_pred             EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence            999999999999987666789999999999999999999998   99999999999999832200  1127999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCC--CCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHH
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNV--PVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      .....     .....++..|+|||++...  .++.++||||||+++|||++ |..|+......+.        ..+    
T Consensus       156 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~--------~~~----  218 (259)
T cd05037         156 ITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK--------ERF----  218 (259)
T ss_pred             ccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH--------HHH----
Confidence            86543     1123466789999999776  78999999999999999999 4667654321110        000    


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                      .....  ..  +.+       ....+.+++.+||+.+|.+|||+.+|++.|+
T Consensus       219 ~~~~~--~~--~~~-------~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         219 YQDQH--RL--PMP-------DCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             HhcCC--CC--CCC-------CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            00000  00  000       1167889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.3e-34  Score=302.85  Aligned_cols=260  Identities=28%  Similarity=0.449  Sum_probs=204.6

Q ss_pred             HHhhcccccccccccceEEEEEEeccCc--ceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDT--QIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      ...+.+.+.||+|+||.||+|.....+.  ...+++|.+.... .....++.+|+.++++++||||+++++++.. ...+
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~   84 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ   84 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence            3456677899999999999998763222  3468999886553 3455788999999999999999999999987 7889


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +|+||+++++|.+++......+++..+..++.||+.||+|||++   +|+|+||||+||+++     .++.+||+|||.+
T Consensus        85 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~-----~~~~~kL~dfg~~  156 (279)
T cd05057          85 LITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVK-----TPQHVKITDFGLA  156 (279)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEc-----CCCeEEECCCccc
Confidence            99999999999999987766789999999999999999999998   999999999999998     7789999999999


Q ss_pred             cccCCCCCccc-ccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHh
Q 047157          644 KLLNKDQTRTD-TNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       644 ~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      ........... ....++..|+|||.+....++.++||||||+++||+++ |+.||......+.        ..    ..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--------~~----~~  224 (279)
T cd05057         157 KLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEI--------PD----LL  224 (279)
T ss_pred             ccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHH--------HH----HH
Confidence            87653322111 11223567999999988899999999999999999998 9999975432111        11    11


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      .....   . ..+     ......+.+++.+||..||++||++.++++.|+.+..
T Consensus       225 ~~~~~---~-~~~-----~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         225 EKGER---L-PQP-----PICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             hCCCC---C-CCC-----CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            11100   0 001     1122457788999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3e-34  Score=313.83  Aligned_cols=194  Identities=22%  Similarity=0.306  Sum_probs=166.3

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      +....|.+.+.||+|+||.||+|...  ..+..||+|.....      ....|+.++++++||||+++++++.+.+..++
T Consensus        63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  134 (357)
T PHA03209         63 VASLGYTVIKTLTPGSEGRVFVATKP--GQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCM  134 (357)
T ss_pred             hhhcCcEEEEEecCCCCeEEEEEEEC--CCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence            33445778899999999999999886  56678999975432      23468999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |+|++ .++|.+++......+++..+..|+.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++.
T Consensus       135 v~e~~-~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~-----~~~~~kl~DfG~a~  205 (357)
T PHA03209        135 VLPHY-SSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFIN-----DVDQVCIGDLGAAQ  205 (357)
T ss_pred             EEEcc-CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEC-----CCCCEEEecCcccc
Confidence            99999 4689998877777889999999999999999999999   999999999999998     77899999999987


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCC
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHI  697 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~  697 (788)
                      ......  ......||..|+|||++.+..++.++|||||||++|||+++..++
T Consensus       206 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        206 FPVVAP--AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             ccccCc--ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            533221  122356899999999999999999999999999999999876554

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=5.6e-35  Score=327.46  Aligned_cols=266  Identities=24%  Similarity=0.275  Sum_probs=189.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecC--------C
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE--------D  560 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--------~  560 (788)
                      .|.+.++||+|+||.||+|...  .++..||||++....    ....+|+.+++.++||||+++++++...        .
T Consensus        67 ~y~~~~~LG~G~fg~Vy~~~~~--~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~  140 (440)
T PTZ00036         67 SYKLGNIIGNGSFGVVYEAICI--DTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI  140 (440)
T ss_pred             eEEEeEEEEeCCCEEEEEEEEC--CCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence            4677899999999999999886  667799999885432    2234799999999999999999876432        2


Q ss_pred             eEEEEEecCCCCCHhHhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          561 KRLLVYELMPNGTLSNFLFH---EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                      ..++||||+++ +|.+++..   ....+++..+..++.||+.||.|||++   +|+||||||+|||++.    ....+||
T Consensus       141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~----~~~~vkL  212 (440)
T PTZ00036        141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDP----NTHTLKL  212 (440)
T ss_pred             EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcC----CCCceee
Confidence            46799999975 77776642   346788999999999999999999999   9999999999999972    2347999


Q ss_pred             eecCCccccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHH
Q 047157          638 SDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDW  716 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~  716 (788)
                      +|||+++.+.....  .....+++.|+|||++.+ ..++.++|||||||++|||++|..||......+........+...
T Consensus       213 ~DFGla~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p  290 (440)
T PTZ00036        213 CDFGSAKNLLAGQR--SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTP  290 (440)
T ss_pred             eccccchhccCCCC--cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence            99999986643222  223467899999998865 468999999999999999999999997653322111100000000


Q ss_pred             HHHHh--hcccccccccCCC-----CCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          717 VISCM--LSRNLQVLVSHDP-----EVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       717 ~~~~~--~~~~~~~l~~~~~-----~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .....  .......+.-+..     ....+.....++.+|+.+||+.||.+|||+.|++++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h  351 (440)
T PTZ00036        291 TEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD  351 (440)
T ss_pred             CHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence            00000  0000000000000     000011123578899999999999999999999853

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=2.6e-34  Score=304.62  Aligned_cols=251  Identities=24%  Similarity=0.289  Sum_probs=197.7

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      +...+.||+|+||+||++...  .++..+|+|.+....   ......+.+|++++++++|+||+++++.+..++..++||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~   79 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVR--ATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVL   79 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEC--CCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEE
Confidence            445678999999999999886  567799999986542   223346788999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+++++|.+++... ...+++..+..++.|++.||.|||+.   +|+||||||+||+++     .++.+||+|||++..
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~-----~~~~~kl~Dfg~~~~  151 (285)
T cd05632          80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLD-----DYGHIRISDLGLAVK  151 (285)
T ss_pred             EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEC-----CCCCEEEecCCccee
Confidence            999999999988654 34689999999999999999999998   999999999999998     778899999999876


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ......  .....|+..|+|||.+.+..++.++||||||+++|||++|+.||.........        ...........
T Consensus       152 ~~~~~~--~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~--------~~~~~~~~~~~  221 (285)
T cd05632         152 IPEGES--IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKR--------EEVDRRVLETE  221 (285)
T ss_pred             cCCCCc--ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH--------HHHHHhhhccc
Confidence            533221  12346899999999999889999999999999999999999999754221110        00000011000


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS-----MKKVIHM  770 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~  770 (788)
                                ..........+.+++..||+.||++||+     +++++.+
T Consensus       222 ----------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         222 ----------EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             ----------cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence                      0011122345678999999999999999     7777764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=2.1e-34  Score=305.32  Aligned_cols=250  Identities=27%  Similarity=0.325  Sum_probs=197.5

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      +...++||+|+||+||++...  .+++.+|+|.+....   ....+.+.+|+.++++++|+||+++++.+.+.+..++||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~   79 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVR--ATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL   79 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEc--CCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEE
Confidence            445678999999999999887  677799999886432   223456788999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+++++|.+++... ...+++..+..++.|++.||.|||+.   +|+||||||+||+++     .++.++|+|||++..
T Consensus        80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~-----~~~~~~l~Dfg~~~~  151 (285)
T cd05630          80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLD-----DHGHIRISDLGLAVH  151 (285)
T ss_pred             EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEEC-----CCCCEEEeeccceee
Confidence            999999999998654 34588999999999999999999998   999999999999998     778899999999876


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ......  .....|+..|+|||.+.+..++.++||||||+++|||++|+.||..........    ....     .... 
T Consensus       152 ~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~----~~~~-----~~~~-  219 (285)
T cd05630         152 VPEGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE----EVER-----LVKE-  219 (285)
T ss_pred             cCCCcc--ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHH----HHHh-----hhhh-
Confidence            543222  123468999999999999999999999999999999999999997542111000    0000     0000 


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS-----MKKVIH  769 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~  769 (788)
                      ....        ........+.+++..||+.||++|||     ++|+++
T Consensus       220 ~~~~--------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         220 VQEE--------YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             hhhh--------cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            0000        00112345778999999999999999     889887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=2.8e-34  Score=301.51  Aligned_cols=256  Identities=28%  Similarity=0.485  Sum_probs=197.1

Q ss_pred             ccccccccceEEEEEEec----cCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          494 KLVGTGSSGKVYRGILRL----KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~----~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      +.||+|+||.||+|....    ...+..+++|.+.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            368999999999998752    1233689999886543 34566889999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhcc------CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          569 MPNGTLSNFLFHE------GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       569 ~~~gsL~~~l~~~------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      +++++|.+++...      ...+++.++..++.|++.||.|||+.   +++|+||||+||+++.........++|+|||+
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~  157 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGL  157 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCccc
Confidence            9999999999642      23468899999999999999999998   99999999999999843222233899999999


Q ss_pred             ccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHH
Q 047157          643 SKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       643 a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      +........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+        ....    
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~--------~~~~----  225 (269)
T cd05044         158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE--------VLQH----  225 (269)
T ss_pred             ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH--------HHHH----
Confidence            876533221 11122345678999999999999999999999999999998 999986432111        0010    


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                      .....         ...........+.+++.+||+.+|++||++.+|++.|++
T Consensus       226 ~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         226 VTAGG---------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             HhcCC---------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            00000         001111234678899999999999999999999999863

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=2.4e-34  Score=299.51  Aligned_cols=249  Identities=21%  Similarity=0.287  Sum_probs=200.3

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      |.+.+.||+|+||.||++...  .++..+++|.++.. .....+.+.+|+.++++++||||+++++.+.+++..++||||
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   79 (255)
T cd08219           2 YNVLRVVGEGSFGRALLVQHV--NSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY   79 (255)
T ss_pred             ceEEEEeeccCCeEEEEEEEc--CCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence            456789999999999999876  56678999987542 234456788999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          569 MPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       569 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      +++++|.+++... ...++...+..++.||+.||.|||++   +|+|+||||+||+++     +++.++|+|||.+....
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~-----~~~~~~l~dfg~~~~~~  151 (255)
T cd08219          80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLT-----QNGKVKLGDFGSARLLT  151 (255)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEC-----CCCcEEEcccCcceeec
Confidence            9999999988653 45578899999999999999999999   999999999999998     78899999999987664


Q ss_pred             CCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      .... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||........           . .....+...
T Consensus       152 ~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-----------~-~~~~~~~~~  218 (255)
T cd08219         152 SPGA-YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL-----------I-LKVCQGSYK  218 (255)
T ss_pred             cccc-ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH-----------H-HHHhcCCCC
Confidence            3222 12235678899999999988999999999999999999999999965321110           0 011111111


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .+         .......+.+++.+||+.||++||++.|++..
T Consensus       219 ~~---------~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         219 PL---------PSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             CC---------CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            11         11233467789999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=1.3e-34  Score=307.24  Aligned_cols=266  Identities=23%  Similarity=0.293  Sum_probs=191.3

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCC---CccccceEeeEEec-----C
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRT---HHKNLVRLLGFCSE-----E  559 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l---~hpniv~~~~~~~~-----~  559 (788)
                      |.+.+.||+|+||+||+|...  .++..||+|.+....  ......+.+|+++++++   +||||+++++++..     .
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~   79 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDP--HSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE   79 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEEC--CCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence            556789999999999999886  667799999886432  12223455677776655   79999999998864     3


Q ss_pred             CeEEEEEecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEe
Q 047157          560 DKRLLVYELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS  638 (788)
Q Consensus       560 ~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~  638 (788)
                      ...++|+||++ ++|.+++.... ..+++..+..++.||+.||.|||++   +|+||||||+||+++     .++.+||+
T Consensus        80 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~-----~~~~~kl~  150 (288)
T cd07863          80 TKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVT-----SGGQVKLA  150 (288)
T ss_pred             ceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC-----CCCCEEEC
Confidence            45799999997 48888886543 4579999999999999999999999   999999999999998     78899999


Q ss_pred             ecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh-----h
Q 047157          639 DFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV-----L  713 (788)
Q Consensus       639 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~-----~  713 (788)
                      |||++........  .....++..|+|||.+.+..++.++|||||||++|||++|+.||...............     .
T Consensus       151 dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~  228 (288)
T cd07863         151 DFGLARIYSCQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE  228 (288)
T ss_pred             ccCccccccCccc--CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCCh
Confidence            9999986643221  22346788999999999889999999999999999999999999654322111000000     0


Q ss_pred             HHHHHHHhhcccccccccCCCCCc--ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          714 SDWVISCMLSRNLQVLVSHDPEVL--SDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       714 ~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ..|....  ......+........  ......+.+.+++.+||+.||++|||+.|++++
T Consensus       229 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h  285 (288)
T cd07863         229 DDWPRDV--TLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH  285 (288)
T ss_pred             hhCcccc--cccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            0000000  000000000000000  001234567899999999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=2.3e-34  Score=307.82  Aligned_cols=258  Identities=28%  Similarity=0.457  Sum_probs=199.6

Q ss_pred             HhhcccccccccccceEEEEEEeccCcc--eeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~--~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ..+...+.||+|+||.||+|.....+..  ..+++|.+.... .....++.+|+.++++++||||+++++++... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            3445568899999999999987633222  357889886543 23345788999999999999999999998754 4679


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ++||+++|+|.+++......+++..++.++.|++.||.|||++   +|+|+||||+||+++     .++.+||+|||++.
T Consensus        86 v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~-----~~~~~kL~Dfg~~~  157 (303)
T cd05110          86 VTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVK-----SPNHVKITDFGLAR  157 (303)
T ss_pred             eehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc---Ceeccccccceeeec-----CCCceEEccccccc
Confidence            9999999999999977766789999999999999999999999   999999999999998     77789999999998


Q ss_pred             ccCCCCCcc-cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          645 LLNKDQTRT-DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       645 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ......... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||.......        ..++    ..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~--------~~~~----~~  225 (303)
T cd05110         158 LLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE--------IPDL----LE  225 (303)
T ss_pred             cccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHH----HH
Confidence            764332211 112335678999999999999999999999999999997 889986532111        1111    11


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ...         ...........+.+++..||..+|++||+++++++.|+.+.
T Consensus       226 ~~~---------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~  269 (303)
T cd05110         226 KGE---------RLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA  269 (303)
T ss_pred             CCC---------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            110         00001112346778999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=1.2e-33  Score=296.81  Aligned_cols=254  Identities=23%  Similarity=0.352  Sum_probs=187.7

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      +.||+|+||.||+|..........+++|.+.... ....+.+.+|+.+++.++||||+++++.+.+....++||||++++
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   80 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG   80 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence            3689999999999986544444466777765433 345678999999999999999999999999999999999999999


Q ss_pred             CHhHhhhccC---CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          573 TLSNFLFHEG---QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       573 sL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      +|.+++.+..   ...+...+..++.||++||.|||+.   +++||||||+|||++     .++.+||+|||++......
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~-----~~~~~~l~Dfg~~~~~~~~  152 (268)
T cd05086          81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLT-----SDLTVKVGDYGIGPSRYKE  152 (268)
T ss_pred             cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEc-----CCccEEecccccccccCcc
Confidence            9999996542   3456677889999999999999998   999999999999998     7789999999998643221


Q ss_pred             -CCcccccccCCccccCcccccC-------CCCCccCcchhhHHHHHHHHhC-CCCCCccccccccccchhhhHHHHHHH
Q 047157          650 -QTRTDTNMRGTMGYVAPEWLRN-------VPVTTKVDVFSFGVMLLEIICG-RRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       650 -~~~~~~~~~gt~~y~aPE~~~~-------~~~s~k~DVwSlGvil~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                       .........++..|+|||++..       ..++.++||||||+++|||+++ ..||......+.           . ..
T Consensus       153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~-----------~-~~  220 (268)
T cd05086         153 DYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREV-----------L-NH  220 (268)
T ss_pred             hhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHH-----------H-HH
Confidence             1112223467889999998743       2457899999999999999974 567754321110           0 01


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                      ...+....+.++....    ...+++.+++..|| .+|++||+++||++.|.
T Consensus       221 ~~~~~~~~~~~~~~~~----~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         221 VIKDQQVKLFKPQLEL----PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             HHhhcccccCCCccCC----CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            1111111111111111    13345667888899 57999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-35  Score=310.06  Aligned_cols=242  Identities=24%  Similarity=0.341  Sum_probs=204.4

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeeccc---chHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK---DIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMP  570 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~---~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~  570 (788)
                      +.||.|+||.||.+...  .+...||||++.-   .......++++|+..|.+++|||++.+.|+|..+...+|||||| 
T Consensus        32 rEIGHGSFGAVYfArd~--~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYC-  108 (948)
T KOG0577|consen   32 REIGHGSFGAVYFARDV--RNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYC-  108 (948)
T ss_pred             HHhcCCccceeEEeecc--CccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHH-
Confidence            57999999999999887  6777999999863   34556679999999999999999999999999999999999999 


Q ss_pred             CCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCC
Q 047157          571 NGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ  650 (788)
Q Consensus       571 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~  650 (788)
                      -|+-.+++.-..+++.+.++..|..+.+.||+|||+.   +.||||||..|||++     +.+.|||+|||.|.+..+. 
T Consensus       109 lGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLs-----e~g~VKLaDFGSAsi~~PA-  179 (948)
T KOG0577|consen  109 LGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLS-----EPGLVKLADFGSASIMAPA-  179 (948)
T ss_pred             hccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEec-----CCCeeeeccccchhhcCch-
Confidence            5688888877778899999999999999999999999   999999999999998     8899999999999876543 


Q ss_pred             CcccccccCCccccCcccc---cCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          651 TRTDTNMRGTMGYVAPEWL---RNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       651 ~~~~~~~~gt~~y~aPE~~---~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                          ..++||+.|||||++   ..+.|+-|+|||||||+..||.-.++|....+....           . ..       
T Consensus       180 ----nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA-----------L-YH-------  236 (948)
T KOG0577|consen  180 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-----------L-YH-------  236 (948)
T ss_pred             ----hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH-----------H-HH-------
Confidence                347899999999987   467899999999999999999999998754321100           0 00       


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                       +-...+......+..+.+..++..||+.-|.+|||.++++.+-
T Consensus       237 -IAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~  279 (948)
T KOG0577|consen  237 -IAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHR  279 (948)
T ss_pred             -HHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence             0111333344667888999999999999999999999998753

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=2.8e-34  Score=302.66  Aligned_cols=258  Identities=25%  Similarity=0.354  Sum_probs=202.1

Q ss_pred             HhhcccccccccccceEEEEEEecc---CcceeeeeeecccchHH-HHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLK---DTQIEIAVKKLEKDIEK-TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      ..+...+.||+|+||.||+|..+..   .....+++|.+...... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            3455668899999999999987532   23457999988654433 5678999999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccC--------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcE
Q 047157          564 LVYELMPNGTLSNFLFHEG--------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMA  635 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~--------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~  635 (788)
                      +||||+++++|.+++....        ..+++..+..++.||+.||+|||+.   +|+|+||||+||+++     .++.+
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~-----~~~~~  156 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVS-----SQREV  156 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEe-----CCCcE
Confidence            9999999999999996543        1578999999999999999999999   999999999999998     77899


Q ss_pred             EEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhH
Q 047157          636 KISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLS  714 (788)
Q Consensus       636 kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~  714 (788)
                      +|+|||++...............++..|+|||.+.+...+.++||||||+++|+|++ |..||.......          
T Consensus       157 ~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~----------  226 (275)
T cd05046         157 KVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE----------  226 (275)
T ss_pred             EEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH----------
Confidence            999999987543332222233455678999999988889999999999999999998 778885432111          


Q ss_pred             HHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          715 DWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       715 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                        .............        ........+.+++.+||+.+|++||++.|++++|.+
T Consensus       227 --~~~~~~~~~~~~~--------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~  275 (275)
T cd05046         227 --VLNRLQAGKLELP--------VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE  275 (275)
T ss_pred             --HHHHHHcCCcCCC--------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence              0011111111110        011234578889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=3.5e-34  Score=302.26  Aligned_cols=249  Identities=24%  Similarity=0.341  Sum_probs=199.9

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      +.|...+.||+|+||.||+|.+.  .++..||+|.+.... ....+.+.+|++++++++||||+++++++..++..++|+
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDN--RTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM   81 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEc--CCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence            34555678999999999999876  567789999886433 345568899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++..  ..+++..+..++.||++||.|||++   +++|+||+|+||+++     .++.++|+|||++..+
T Consensus        82 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~-----~~~~~~l~dfg~~~~~  151 (277)
T cd06642          82 EYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLS-----EQGDVKLADFGVAGQL  151 (277)
T ss_pred             EccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEe-----CCCCEEEccccccccc
Confidence            99999999998853  4678899999999999999999998   999999999999998     7789999999999765


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      ..... ......++..|+|||.+.+..++.++||||||+++|||++|+.|+........           . ....... 
T Consensus       152 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----------~-~~~~~~~-  217 (277)
T cd06642         152 TDTQI-KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV-----------L-FLIPKNS-  217 (277)
T ss_pred             cCcch-hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH-----------H-hhhhcCC-
Confidence            43221 12234578899999999998999999999999999999999999864321110           0 0000000 


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                            .+.  ........+.+++.+||+.+|++||++.+|+++
T Consensus       218 ------~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         218 ------PPT--LEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             ------CCC--CCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence                  000  111234567889999999999999999999974

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=2.3e-34  Score=306.64  Aligned_cols=248  Identities=24%  Similarity=0.344  Sum_probs=200.7

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      |.+.+.||.|++|.||+|...  .++..|++|.+........+.+.+|+.+++.++||||+++++++...+..++|+||+
T Consensus        21 y~~~~~lg~g~~g~vy~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          21 YTRYEKIGQGASGTVFTAIDV--ATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             EEEEEEEecCCCeEEEEEEEc--CCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            456688999999999999876  567799999887655555678899999999999999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|.+++..  ..+++.++..++.|++.||.|||+.   +++|+||||+||+++     .++.+||+|||++......
T Consensus        99 ~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~-----~~~~~kl~dfg~~~~~~~~  168 (296)
T cd06655          99 AGGSLTDVVTE--TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLG-----MDGSVKLTDFGFCAQITPE  168 (296)
T ss_pred             CCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEC-----CCCCEEEccCccchhcccc
Confidence            99999998854  3578999999999999999999999   999999999999998     7789999999998865433


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      .. ......++..|+|||.+.+..++.++||||||+++|+|++|+.||.........          .  ......    
T Consensus       169 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~----------~--~~~~~~----  231 (296)
T cd06655         169 QS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL----------Y--LIATNG----  231 (296)
T ss_pred             cc-cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----------H--HHHhcC----
Confidence            22 122346788999999999888999999999999999999999999764321110          0  000000    


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                         .+...........+.+++.+||+.||++||++.++++
T Consensus       232 ---~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         232 ---TPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             ---CcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence               0001111123456778999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=5.5e-34  Score=308.30  Aligned_cols=199  Identities=17%  Similarity=0.232  Sum_probs=166.3

Q ss_pred             cccccccc--ccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          492 FSKLVGTG--SSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       492 ~~~~lg~G--~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      +.++||+|  +|++||++..+  .++..||+|++....  ....+.+.+|+++++.++||||+++++++..++..++|+|
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   79 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYK--PTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS   79 (327)
T ss_pred             hhhhccccccceEEEEEEeec--ccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEe
Confidence            45789999  68899999887  678899999987542  3445677889999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          568 LMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       568 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      |+++++|.+++... ...+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.++++||+.....
T Consensus        80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~-----~~~~~~l~~~~~~~~~  151 (327)
T cd08227          80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILIS-----VDGKVYLSGLRSNLSM  151 (327)
T ss_pred             ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEe-----cCCcEEEcccchhhcc
Confidence            99999999999654 34588999999999999999999998   999999999999998     7789999999876543


Q ss_pred             CCCCCc------ccccccCCccccCcccccC--CCCCccCcchhhHHHHHHHHhCCCCCCcc
Q 047157          647 NKDQTR------TDTNMRGTMGYVAPEWLRN--VPVTTKVDVFSFGVMLLEIICGRRHIELS  700 (788)
Q Consensus       647 ~~~~~~------~~~~~~gt~~y~aPE~~~~--~~~s~k~DVwSlGvil~elltg~~p~~~~  700 (788)
                      ......      ......++..|+|||++.+  ..++.++|||||||++|||++|+.||...
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  213 (327)
T cd08227         152 INHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM  213 (327)
T ss_pred             ccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence            221110      0112346778999999875  46899999999999999999999999743

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=3.3e-34  Score=305.71  Aligned_cols=250  Identities=24%  Similarity=0.329  Sum_probs=202.1

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      ..|.+.+.||+|+||.||++...  ..+..|++|.+........+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   96 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDI--ATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   96 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEEC--CCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeec
Confidence            45666789999999999999875  5677999999876555556778999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++++|.+++.+  ..+++.++..++.|++.||.|||+.   +|+||||||+||+++     .++.++|+|||.+....
T Consensus        97 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~-----~~~~~~l~Dfg~~~~~~  166 (297)
T cd06656          97 YLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLG-----MDGSVKLTDFGFCAQIT  166 (297)
T ss_pred             ccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEC-----CCCCEEECcCccceEcc
Confidence            9999999999854  4578889999999999999999998   999999999999998     77899999999987654


Q ss_pred             CCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      .... ......+++.|+|||.+.+..++.++||||||+++|+|++|+.||...........                   
T Consensus       167 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-------------------  226 (297)
T cd06656         167 PEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-------------------  226 (297)
T ss_pred             CCcc-CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-------------------
Confidence            3322 12234678899999999998899999999999999999999999965432111000                   


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ......+...........+.+++.+||+.||++||++++|++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         227 IATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             eccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            000001111112223456778999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=5.7e-36  Score=291.91  Aligned_cols=249  Identities=24%  Similarity=0.335  Sum_probs=213.6

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      ..+.++||+|+||.||++.++  ..+..||||++.-+  ...+++.+|+.++++...|++|++||.+.....+++|||||
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~--EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC  110 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHR--ESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC  110 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHh--ccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence            445688999999999999988  78889999998753  45678999999999999999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ..|+..+.++.+.+.+.+.++..+++..++||.|||..   .-+|||||..|||++     .++.+||+|||.+-.+...
T Consensus       111 GAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLN-----T~G~AKLADFGVAGQLTDT  182 (502)
T KOG0574|consen  111 GAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLN-----TDGIAKLADFGVAGQLTDT  182 (502)
T ss_pred             CCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEc-----ccchhhhhhccccchhhhh
Confidence            99999999999999999999999999999999999998   889999999999998     8899999999999876432


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      - .......||+-|||||++..-.|+.++||||||+...||..|++|+.........                   +--.
T Consensus       183 M-AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI-------------------FMIP  242 (502)
T KOG0574|consen  183 M-AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI-------------------FMIP  242 (502)
T ss_pred             H-HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee-------------------Eecc
Confidence            2 2234578999999999999999999999999999999999999999643211110                   0011


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ..+.|....+.+...++-++++.||-..|++|-|+.+++++
T Consensus       243 T~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  243 TKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             CCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence            12345555677888999999999999999999999888764

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=2.7e-34  Score=314.83  Aligned_cols=267  Identities=22%  Similarity=0.264  Sum_probs=194.9

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCC-----
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED-----  560 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----  560 (788)
                      ..|.+.+.||+|+||.||++...  ..+..||+|.+...  .....+.+.+|+.+++.++||||+++++++....     
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          21 KRYQQLKPIGSGAQGIVCAAFDT--VLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hceEEEEEeecCCCEEEEEEEEc--CCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            45677899999999999999876  66779999998643  2344567889999999999999999999986543     


Q ss_pred             -eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEee
Q 047157          561 -KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD  639 (788)
Q Consensus       561 -~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~D  639 (788)
                       ..++||||+++ +|.+.+.   ..++...+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~-----~~~~~kl~D  166 (359)
T cd07876          99 QDVYLVMELMDA-NLCQVIH---MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVK-----SDCTLKILD  166 (359)
T ss_pred             ceeEEEEeCCCc-CHHHHHh---ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEC-----CCCCEEEec
Confidence             57999999965 5666553   3477888899999999999999999   999999999999998     788999999


Q ss_pred             cCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccch-------hh
Q 047157          640 FGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVD-------IV  712 (788)
Q Consensus       640 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~-------~~  712 (788)
                      ||++.......  ......+|+.|+|||.+.+..++.++||||||+++|||++|+.||...+.........       ..
T Consensus       167 fg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~  244 (359)
T cd07876         167 FGLARTACTNF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAE  244 (359)
T ss_pred             CCCccccccCc--cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHH
Confidence            99997643322  2233568899999999999999999999999999999999999997653221100000       00


Q ss_pred             hHH----HHHHHhhc-cccc-----ccccC---CCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          713 LSD----WVISCMLS-RNLQ-----VLVSH---DPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       713 ~~~----~~~~~~~~-~~~~-----~l~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ...    ........ ....     ++...   .............+.+++.+||+.||++|||+.|++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  315 (359)
T cd07876         245 FMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH  315 (359)
T ss_pred             HHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence            000    00000000 0000     00000   00000011123567899999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=3.1e-34  Score=301.74  Aligned_cols=249  Identities=25%  Similarity=0.358  Sum_probs=194.8

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEecC------Ce
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEE------DK  561 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~------~~  561 (788)
                      .|.+.+.||+|+||.||+|...  ..+..||+|.+.... .....+.+|+.++.++ +||||+++++++...      ..
T Consensus         7 ~y~~~~~lg~g~~g~vy~~~~~--~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~   83 (272)
T cd06637           7 IFELVELVGNGTYGQVYKGRHV--KTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ   83 (272)
T ss_pred             hhhHHHheeecCCeEEEEEEEc--CCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcE
Confidence            3556688999999999999886  667799999986542 3446788999999998 799999999998653      46


Q ss_pred             EEEEEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          562 RLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      .++||||+++++|.+++... ...+++..+..++.|++.||+|||++   +|+|+||||+||+++     +++.+||+||
T Consensus        84 ~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~-----~~~~~~l~Df  155 (272)
T cd06637          84 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLT-----ENAEVKLVDF  155 (272)
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEEC-----CCCCEEEccC
Confidence            89999999999999999764 35678999999999999999999999   999999999999998     7788999999


Q ss_pred             CCccccCCCCCcccccccCCccccCccccc-----CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLR-----NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSD  715 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~  715 (788)
                      |++........ ......|+..|+|||++.     ...++.++||||||+++|||++|+.||.......          .
T Consensus       156 g~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~----------~  224 (272)
T cd06637         156 GVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR----------A  224 (272)
T ss_pred             CCceecccccc-cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH----------H
Confidence            99986543221 223356889999999985     3468889999999999999999999996432110          0


Q ss_pred             HHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          716 WVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       716 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ..  .........        .........+.+++.+||+.||.+|||+.|+++
T Consensus       225 ~~--~~~~~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         225 LF--LIPRNPAPR--------LKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             HH--HHhcCCCCC--------CCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            00  000000000        111123356788999999999999999999975

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=1.3e-34  Score=317.50  Aligned_cols=200  Identities=25%  Similarity=0.316  Sum_probs=172.4

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      +.+.+.||+|+||+||++...  .++..||+|.+....   ......+.+|+.++..++||||+++++.+.+.+..++||
T Consensus         3 f~~~~~lG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           3 FESLKVIGRGAFGEVRLVQKK--DTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             ceEEEEEeeCCCEEEEEEEEC--CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            456689999999999999886  667799999986532   334567888999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++|+|.+++.+. ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++..+
T Consensus        81 E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~-----~~~~vkL~DfG~~~~~  151 (360)
T cd05627          81 EFLPGGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLD-----AKGHVKLSDFGLCTGL  151 (360)
T ss_pred             eCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEEC-----CCCCEEEeeccCCccc
Confidence            999999999998654 5678899999999999999999999   999999999999998     7889999999998754


Q ss_pred             CCCCC----------------------------------cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh
Q 047157          647 NKDQT----------------------------------RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC  692 (788)
Q Consensus       647 ~~~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt  692 (788)
                      .....                                  .......||+.|+|||++.+..++.++|||||||++|||++
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~t  231 (360)
T cd05627         152 KKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI  231 (360)
T ss_pred             ccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeeccc
Confidence            32110                                  00113468999999999999999999999999999999999


Q ss_pred             CCCCCCcc
Q 047157          693 GRRHIELS  700 (788)
Q Consensus       693 g~~p~~~~  700 (788)
                      |+.||...
T Consensus       232 G~~Pf~~~  239 (360)
T cd05627         232 GYPPFCSE  239 (360)
T ss_pred             CCCCCCCC
Confidence            99999754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-34  Score=304.60  Aligned_cols=252  Identities=22%  Similarity=0.324  Sum_probs=197.9

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeeccc--chHHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK--DIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~--~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~  563 (788)
                      ...|.+.++||+||.+.||++...   +...+|+|++..  ...+...-|.+|+..|.+| .|.+||++++|-..++.+|
T Consensus       360 g~~Yeilk~iG~GGSSkV~kV~~s---~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lY  436 (677)
T KOG0596|consen  360 GREYEILKQIGSGGSSKVFKVLNS---DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLY  436 (677)
T ss_pred             cchhhHHHhhcCCCcceeeeeecC---CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEE
Confidence            344566789999999999999763   445777776642  3356677899999999999 5999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +||||- ..+|...|.+....++...+..+..||+.|+.++|++   +|||.||||.|+|+      ..|.+||+|||+|
T Consensus       437 mvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLl------VkG~LKLIDFGIA  506 (677)
T KOG0596|consen  437 MVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLL------VKGRLKLIDFGIA  506 (677)
T ss_pred             EEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEE------EeeeEEeeeechh
Confidence            999996 6699999987766665447788999999999999999   99999999999999      6789999999999


Q ss_pred             cccCCCCCcc-cccccCCccccCcccccCC-----------CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchh
Q 047157          644 KLLNKDQTRT-DTNMRGTMGYVAPEWLRNV-----------PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI  711 (788)
Q Consensus       644 ~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~-----------~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~  711 (788)
                      ..+..+.... ....+||+.||+||.+...           +.+.++||||||||||+|+.|+.||.....         
T Consensus       507 ~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n---------  577 (677)
T KOG0596|consen  507 NAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN---------  577 (677)
T ss_pred             cccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH---------
Confidence            9887765543 3457899999999988432           366899999999999999999999964311         


Q ss_pred             hhHHHHHHHhhcccccccccCCCCCcc-cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          712 VLSDWVISCMLSRNLQVLVSHDPEVLS-DLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       712 ~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                         .|.       .+..+.++.-+... +.....+++++++.||+.||.+|||+.|+|++
T Consensus       578 ---~~a-------Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  578 ---QIA-------KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             ---HHH-------HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence               011       12223322221111 11112238999999999999999999999864

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=2.2e-34  Score=315.15  Aligned_cols=267  Identities=21%  Similarity=0.235  Sum_probs=195.4

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecC------
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE------  559 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------  559 (788)
                      ..|.+.+.||+|+||.||++...  ..+..||||.+...  .....+.+.+|+.+++.++||||+++++++...      
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          17 KRYQNLKPIGSGAQGIVCAAYDA--VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hceeEEEEeeecCCEEEEEEEec--CCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            35667789999999999999876  56778999998653  233456788999999999999999999988543      


Q ss_pred             CeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEee
Q 047157          560 DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD  639 (788)
Q Consensus       560 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~D  639 (788)
                      ...++||||+++ +|.+.+.   ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|
T Consensus        95 ~~~~lv~e~~~~-~l~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~-----~~~~~kl~D  162 (355)
T cd07874          95 QDVYLVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVK-----SDCTLKILD  162 (355)
T ss_pred             ceeEEEhhhhcc-cHHHHHh---hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEC-----CCCCEEEee
Confidence            357999999965 6666663   3478888999999999999999999   999999999999998     788999999


Q ss_pred             cCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchh--------
Q 047157          640 FGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI--------  711 (788)
Q Consensus       640 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~--------  711 (788)
                      ||+++......  ......++..|+|||++.+..++.++||||||+++|||++|+.||......+.......        
T Consensus       163 fg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  240 (355)
T cd07874         163 FGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE  240 (355)
T ss_pred             CcccccCCCcc--ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence            99998654322  22335689999999999999999999999999999999999999976532211100000        


Q ss_pred             ---hhHHHHHHHhhc-cccccc-----ccCC---CCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          712 ---VLSDWVISCMLS-RNLQVL-----VSHD---PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       712 ---~~~~~~~~~~~~-~~~~~l-----~~~~---~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                         .+.......... .....+     ....   ............+.+++.+||+.||++|||+.|++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             HHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence               000000000000 000000     0000   0000111224567899999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.8e-34  Score=300.73  Aligned_cols=248  Identities=25%  Similarity=0.339  Sum_probs=201.0

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      |.+.+.||.|++|.||+|...  .++..+++|.+.... ......+.+|+++++.++||||+++++++.++...++|+||
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           3 FTLLECIGKGSFGEVYKAIDK--RTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             hhhhhhhcCCCCeEEEEEEEC--CCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            556688999999999999886  567799999986543 34456788999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++++|.+++...  .+++..+..++.|++.||.|||++   +++|+||+|+||+++     .++.++|+|||++.....
T Consensus        81 ~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~-----~~~~~~l~d~g~~~~~~~  150 (274)
T cd06609          81 CGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLS-----EEGDVKLADFGVSGQLTS  150 (274)
T ss_pred             eCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEC-----CCCCEEEcccccceeecc
Confidence            9999999998654  789999999999999999999998   999999999999998     788999999999987654


Q ss_pred             CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      ... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||........            .......... 
T Consensus       151 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~------------~~~~~~~~~~-  216 (274)
T cd06609         151 TMS-KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV------------LFLIPKNNPP-  216 (274)
T ss_pred             ccc-ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH------------HHHhhhcCCC-
Confidence            322 22335678899999999988899999999999999999999999965421110            0001011000 


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                            . .........+.+++.+||+.||++|||+++++++
T Consensus       217 ------~-~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~  251 (274)
T cd06609         217 ------S-LEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKH  251 (274)
T ss_pred             ------C-CcccccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence                  0 0111134567889999999999999999999863

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=7.4e-34  Score=296.01  Aligned_cols=250  Identities=21%  Similarity=0.306  Sum_probs=203.2

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      |.+.++||+|+||.||.+...  .++..+++|.+...  .....+++.+|++++++++|+||+++++++.+.+..+++||
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e   79 (256)
T cd08221           2 YIPIRVLGKGAFGEATLYRRT--EDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME   79 (256)
T ss_pred             ceEeeEecccCCceEEEEEEc--CCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence            566789999999999998876  56678999987643  34556788999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          568 LMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       568 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      |+++++|.+++... ...+++.++..++.|++.+|.|||+.   +++|+||+|+||+++     .++.+||+|||.+...
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~-----~~~~~kl~d~~~~~~~  151 (256)
T cd08221          80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLT-----KAGLIKLGDFGISKIL  151 (256)
T ss_pred             ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEe-----CCCCEEECcCcceEEc
Confidence            99999999999765 45679999999999999999999998   999999999999998     7788999999999876


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      ..... ......+++.|+|||.+.+..++.++||||||+++|||++|+.||......+.           .. ....+..
T Consensus       152 ~~~~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~-----------~~-~~~~~~~  218 (256)
T cd08221         152 GSEYS-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNL-----------VV-KIVQGNY  218 (256)
T ss_pred             ccccc-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHH-----------HH-HHHcCCC
Confidence            44332 22335688999999999888899999999999999999999999965422110           00 1111111


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                      ..         ........+.+++.+||+.+|++||+++++++++
T Consensus       219 ~~---------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         219 TP---------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             CC---------CccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence            11         0122345688899999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=6.2e-34  Score=296.61  Aligned_cols=251  Identities=32%  Similarity=0.532  Sum_probs=200.7

Q ss_pred             ccccccccccceEEEEEEeccC--cceeeeeeecccchHH-HHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          492 FSKLVGTGSSGKVYRGILRLKD--TQIEIAVKKLEKDIEK-TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       492 ~~~~lg~G~~g~Vy~~~~~~~~--~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      +.+.||+|+||.||++......  ....|++|.+...... ..+.+.+|++.+.+++|+||+++++++.+.+..+++|||
T Consensus         3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~   82 (258)
T smart00219        3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEY   82 (258)
T ss_pred             ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEec
Confidence            4678999999999999886321  2378999999755433 567899999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCC-CCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          569 MPNGTLSNFLFHEGQR-PGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~-~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      +++++|.+++...... +++..+..++.|++.||+|||+.   +++|+||||+||+++     .++.++|+|||++....
T Consensus        83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~-----~~~~~~l~dfg~~~~~~  154 (258)
T smart00219       83 MEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVG-----ENLVVKISDFGLSRDLY  154 (258)
T ss_pred             cCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEc-----cCCeEEEcccCCceecc
Confidence            9999999999765444 89999999999999999999999   999999999999998     77899999999998765


Q ss_pred             CCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      ...........++..|+|||.+.+..++.++||||+|+++|+|++ |+.||........            .........
T Consensus       155 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~------------~~~~~~~~~  222 (258)
T smart00219      155 DDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEV------------LEYLKKGYR  222 (258)
T ss_pred             cccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHH------------HHHHhcCCC
Confidence            442222212336789999999988889999999999999999998 7788764321110            011111110


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                      .         ........++.+++.+|++.||++|||+.|+++.|
T Consensus       223 ~---------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      223 L---------PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             C---------CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            0         00111456788899999999999999999999875

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=8.3e-34  Score=305.60  Aligned_cols=201  Identities=21%  Similarity=0.322  Sum_probs=162.2

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEec--CCeEEEEEecCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE--EDKRLLVYELMPN  571 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~lV~e~~~~  571 (788)
                      .+||+|+||+||+|..........||+|.+....  ....+.+|++++++++||||+++++++..  +...++|+||+++
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH   84 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence            5799999999999987654566789999886532  23467789999999999999999998853  5678999999864


Q ss_pred             CCHhHhhhcc--------CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          572 GTLSNFLFHE--------GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       572 gsL~~~l~~~--------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                       +|.+++...        ...+++..+..++.||+.||.|||++   +|+||||||+|||+.... ..++.+||+|||++
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~-~~~~~~kl~DfG~a  159 (317)
T cd07867          85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEG-PERGRVKIADMGFA  159 (317)
T ss_pred             -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCC-CCCCcEEEeeccce
Confidence             777776321        23478889999999999999999999   999999999999995321 15678999999999


Q ss_pred             cccCCCCCc--ccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccc
Q 047157          644 KLLNKDQTR--TDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSR  701 (788)
Q Consensus       644 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~  701 (788)
                      +........  ......+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||....
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~  220 (317)
T cd07867         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  220 (317)
T ss_pred             eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence            876443221  2233567899999999876 458899999999999999999999997543

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=2.6e-34  Score=307.22  Aligned_cols=267  Identities=23%  Similarity=0.283  Sum_probs=198.1

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .|.+.+.||+|+||.||+|...  .++..||+|.+.... ......+.+|++++++++||||+++++++..++..++|||
T Consensus         7 ~y~~~~~lg~g~~g~vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e   84 (301)
T cd07873           7 TYIKLDKLGEGTYATVYKGRSK--LTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE   84 (301)
T ss_pred             ceEEeeEeccCcCEEEEEEEEc--CCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEe
Confidence            4666789999999999999876  566789999886432 2234467789999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |++ ++|.+++......+++..+..++.||++||.|||+.   +|+|+||||+||+++     .++.+||+|||++....
T Consensus        85 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~-----~~~~~kl~dfg~~~~~~  155 (301)
T cd07873          85 YLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLIN-----ERGELKLADFGLARAKS  155 (301)
T ss_pred             ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEEC-----CCCcEEECcCcchhccC
Confidence            997 599999877667789999999999999999999999   999999999999998     77899999999987643


Q ss_pred             CCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh---HHHHHHHhhc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL---SDWVISCMLS  723 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~  723 (788)
                      .... ......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||......+........+   ....+.....
T Consensus       156 ~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (301)
T cd07873         156 IPTK-TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILS  234 (301)
T ss_pred             CCCC-cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhc
Confidence            3221 1223456889999998865 457889999999999999999999997654322111000000   0000000000


Q ss_pred             c-cccccccCCCCCcc------cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          724 R-NLQVLVSHDPEVLS------DLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       724 ~-~~~~l~~~~~~~~~------~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      . .....-  .+....      .......+.+++.+||+.||.+|||++|+++
T Consensus       235 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         235 NEEFKSYN--YPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             cccccccc--cCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            0 000000  000000      0112346778999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=4.6e-34  Score=302.66  Aligned_cols=270  Identities=23%  Similarity=0.272  Sum_probs=202.3

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      |.+.+.||+|++|.||+|...  .++..|++|.+....  ....+.+.+|+.++++++||||+++++++..+...++|+|
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~--~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e   79 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDR--ETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME   79 (286)
T ss_pred             ceEEeecccCCCcEEEEEEEC--CCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence            567789999999999999886  557789999986543  3445688999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+ +++|.+++......+++.++..++.||++||.|||+.   +++|+||||+||+++     .++.++|+|||++....
T Consensus        80 ~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~-----~~~~~~l~dfg~~~~~~  150 (286)
T cd07832          80 YM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLIS-----ADGVLKIADFGLARLFS  150 (286)
T ss_pred             cc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEc-----CCCcEEEeeeeeccccc
Confidence            99 9999999977667789999999999999999999998   999999999999998     78899999999998765


Q ss_pred             CCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh---HHHHHHHhhc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL---SDWVISCMLS  723 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~  723 (788)
                      ...........++..|+|||.+.+. .++.++||||+|+++|||++|+.+|......+.........   ....+....+
T Consensus       151 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (286)
T cd07832         151 EEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTS  230 (286)
T ss_pred             CCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccC
Confidence            4432223345688899999988654 46899999999999999999988776543211100000000   0000000000


Q ss_pred             -ccccccccC-CCC-Ccc--cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          724 -RNLQVLVSH-DPE-VLS--DLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       724 -~~~~~l~~~-~~~-~~~--~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                       ......... ... ...  ..+..+.+.+++.+||+.||++|||+++++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         231 LPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             cchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence             000000000 000 000  01224778899999999999999999999864

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=9.3e-34  Score=297.64  Aligned_cols=252  Identities=25%  Similarity=0.375  Sum_probs=199.0

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccc----------hHHHHHHHHHHHHHhcC-CCccccceEeeEEec
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD----------IEKTNEEFMTELKIIGR-THHKNLVRLLGFCSE  558 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~----------~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~  558 (788)
                      |.+.+.||+|+||.||+|..... .+..+++|.+...          ......++.+|+.++.+ ++||||+++++++.+
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNN-GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCC-CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            45568899999999999998631 4568999987422          23344567889988865 799999999999999


Q ss_pred             CCeEEEEEecCCCCCHhHhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhh-ccCCceEecCCCCCcEEeccCCCCCCCc
Q 047157          559 EDKRLLVYELMPNGTLSNFLFH---EGQRPGWVQRVEIALGVARGLLYLHE-ECETQIIHCDIKPQNVLLDLKTLDTNYM  634 (788)
Q Consensus       559 ~~~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~~~~~~~~  634 (788)
                      ++..++||||+++++|.+++..   ....+++..++.++.|++.||.|||+ .   +++|+||+|+||+++     .++.
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~-----~~~~  152 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLG-----EDDK  152 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEEC-----CCCc
Confidence            9999999999999999998743   34568899999999999999999996 5   899999999999998     7889


Q ss_pred             EEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhH
Q 047157          635 AKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS  714 (788)
Q Consensus       635 ~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~  714 (788)
                      +||+|||.+.......  ......++..|+|||.+.+..++.++||||||+++|||++|+.||........         
T Consensus       153 ~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~---------  221 (269)
T cd08528         153 VTITDFGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSL---------  221 (269)
T ss_pred             EEEecccceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHH---------
Confidence            9999999998754433  22345688899999999988899999999999999999999999864321110         


Q ss_pred             HHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          715 DWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       715 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                        . ...........        ........+.+++.+||+.||++||++.||.++++
T Consensus       222 --~-~~~~~~~~~~~--------~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         222 --A-TKIVEAVYEPL--------PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             --H-HHHhhccCCcC--------CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence              0 00111111100        01123456788999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=5.1e-34  Score=304.43  Aligned_cols=267  Identities=22%  Similarity=0.255  Sum_probs=198.7

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchH-----HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE-----KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      |.+.+.||+|++|.||+|...  .++..|++|.+.....     .....+..|++++++++|+||+++++++.+.+..++
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l   79 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDK--ETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINL   79 (298)
T ss_pred             ceeeeeeeeccccEEEEEEEC--CCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEE
Confidence            456688999999999999876  5567999999865432     234567889999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+ +++|.+++......+++..+..++.||++||.|||++   +|+|+||||+||+++     .++.+||+|||++.
T Consensus        80 v~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~-----~~~~~~l~dfg~~~  150 (298)
T cd07841          80 VFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIA-----SDGVLKLADFGLAR  150 (298)
T ss_pred             EEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEc-----CCCCEEEccceeee
Confidence            99999 9999999976555789999999999999999999999   999999999999998     78899999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh---HHHHHHH
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL---SDWVISC  720 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~~~  720 (788)
                      ........ .....++..|+|||.+.+ ..++.++||||||+++|||++|..+|......+.........   ....+..
T Consensus       151 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (298)
T cd07841         151 SFGSPNRK-MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPG  229 (298)
T ss_pred             eccCCCcc-ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhh
Confidence            76543221 122345778999998854 467899999999999999999987776543211110000000   0000000


Q ss_pred             hhcccccccccCCCCCc-----ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEVL-----SDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                        ...+...........     ........+.+++.+||+.||++|||++||+++
T Consensus       230 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         230 --VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             --cccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence              000000000000000     011235678899999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-34  Score=312.37  Aligned_cols=241  Identities=26%  Similarity=0.294  Sum_probs=186.1

Q ss_pred             ccccccceEEEEEEeccCcceeeeeeecccchH---HHHHHHHHHHHHhcCC---CccccceEeeEEecCCeEEEEEecC
Q 047157          496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRT---HHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       496 lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l---~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      ||+|+||+||+|...  .++..||+|.+.+...   .....+..|..++.+.   +||||+++++.+.+.+..++||||+
T Consensus         1 lG~G~~g~Vy~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~   78 (330)
T cd05586           1 IGKGTFGQVYQVRKK--DTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYM   78 (330)
T ss_pred             CCCCCceEEEEEEEC--CCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCC
Confidence            699999999999876  6677999999865321   2233455666666654   6999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|.+++.+. ..+++..+..++.||++||+|||++   +|+||||||+|||++     .++.+||+|||++......
T Consensus        79 ~~g~L~~~l~~~-~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~-----~~~~~kl~Dfg~a~~~~~~  149 (330)
T cd05586          79 SGGELFWHLQKE-GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLD-----ATGHIALCDFGLSKANLTD  149 (330)
T ss_pred             CCChHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEEC-----CCCCEEEecCCcCcCCCCC
Confidence            999999988654 5688999999999999999999999   999999999999998     7789999999998754322


Q ss_pred             CCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      .. ......||..|+|||.+.+. .++.++|||||||++|||++|+.||......+.            ......+... 
T Consensus       150 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~------------~~~i~~~~~~-  215 (330)
T cd05586         150 NK-TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQM------------YRNIAFGKVR-  215 (330)
T ss_pred             CC-CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHH------------HHHHHcCCCC-
Confidence            21 22345689999999998754 489999999999999999999999975432111            0111111110 


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC----CHHHHHH
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP----SMKKVIH  769 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP----t~~evl~  769 (788)
                      +    +    .......+.+++.+||+.||++||    ++.++++
T Consensus       216 ~----~----~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         216 F----P----KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             C----C----CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            0    0    011245667899999999999998    5666665

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=9.5e-34  Score=295.31  Aligned_cols=249  Identities=24%  Similarity=0.343  Sum_probs=199.6

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEec-CCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSE-EDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lV~  566 (788)
                      |.+.+.||+|++|.||++...  .++..+++|.+....  ....+.+.+|++++++++|||++++++.+.. +...++||
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~   79 (257)
T cd08223           2 YCFVRVVGKGSYGEVSLVRHR--TDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM   79 (257)
T ss_pred             ceEEEEecCCCCeEEEEEEEc--CCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence            567789999999999999886  556689999986432  3445678899999999999999999998764 44679999


Q ss_pred             ecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+++++|.+++... ...+++.++..++.|++.||.+||+.   +|+|+||||+||+++     .++.++|+|||++..
T Consensus        80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~-----~~~~~~l~df~~~~~  151 (257)
T cd08223          80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLT-----RTNIIKVGDLGIARV  151 (257)
T ss_pred             cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEe-----cCCcEEEecccceEE
Confidence            999999999999764 44589999999999999999999999   999999999999998     788999999999986


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ...... ......+++.|+|||.+.+..++.++||||||+++++|++|+.||.......           ... ....+.
T Consensus       152 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~-----------~~~-~~~~~~  218 (257)
T cd08223         152 LENQCD-MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS-----------LVY-RIIEGK  218 (257)
T ss_pred             ecccCC-ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH-----------HHH-HHHhcC
Confidence            643322 2233567889999999999999999999999999999999999986432111           000 011111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ...         ........+.+++.+|++.||++||++.+++++
T Consensus       219 ~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         219 LPP---------MPKDYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             CCC---------CccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            110         112344678899999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=4.9e-34  Score=303.51  Aligned_cols=245  Identities=27%  Similarity=0.394  Sum_probs=197.3

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGT  573 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~gs  573 (788)
                      ..||+|+||.||++...  .++..|+||.+........+.+.+|+.+++.++||||+++++.+...+..++||||+++++
T Consensus        28 ~~lg~g~~g~v~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~  105 (292)
T cd06658          28 IKIGEGSTGIVCIATEK--HTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGA  105 (292)
T ss_pred             hcccCCCCeEEEEEEEC--CCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCc
Confidence            56899999999999876  5667899999876656667789999999999999999999999999999999999999999


Q ss_pred             HhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCcc
Q 047157          574 LSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT  653 (788)
Q Consensus       574 L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~  653 (788)
                      |.+++..  ..+++..+..++.||+.||.|||++   +|+||||||+||+++     .++.++|+|||++........ .
T Consensus       106 L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~-----~~~~~kL~dfg~~~~~~~~~~-~  174 (292)
T cd06658         106 LTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLT-----SDGRIKLSDFGFCAQVSKEVP-K  174 (292)
T ss_pred             HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEc-----CCCCEEEccCcchhhcccccc-c
Confidence            9998843  3578899999999999999999999   999999999999998     778999999999876543222 1


Q ss_pred             cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCC
Q 047157          654 DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHD  733 (788)
Q Consensus       654 ~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  733 (788)
                      .....++..|+|||.+.+..++.++||||||+++|||++|+.||........       .     ..... ....     
T Consensus       175 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-------~-----~~~~~-~~~~-----  236 (292)
T cd06658         175 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-------M-----RRIRD-NLPP-----  236 (292)
T ss_pred             CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-------H-----HHHHh-cCCC-----
Confidence            2234678899999999888999999999999999999999999965321110       0     00000 0000     


Q ss_pred             CCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          734 PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       734 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                       ...........+.+++.+||+.||++|||++|+++.
T Consensus       237 -~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         237 -RVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             -ccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence             011111234467788899999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=6.4e-34  Score=298.48  Aligned_cols=248  Identities=26%  Similarity=0.383  Sum_probs=197.3

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---------HHHHHHHHHHHHHhcCCCccccceEeeEEecCC
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---------EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED  560 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  560 (788)
                      +.+.+.||+|++|.||+|...  ..+..+++|.+....         ....+.+.+|+.++++++||||+++++++.+.+
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   79 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNA--SSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD   79 (267)
T ss_pred             ccccceeecCCCeEEEEEEec--CCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Confidence            345678999999999999876  556789999775432         123367889999999999999999999999999


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ..++|+||+++++|.+++... ..+++..+..++.|++.||.|||+.   +++||||+|+||+++     +++.+||+||
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~-----~~~~~~l~df  150 (267)
T cd06628          80 HLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVD-----NKGGIKISDF  150 (267)
T ss_pred             ccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEc-----CCCCEEeccc
Confidence            999999999999999999654 5678888999999999999999998   999999999999998     7889999999


Q ss_pred             CCccccCCCCCc-----ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHH
Q 047157          641 GISKLLNKDQTR-----TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSD  715 (788)
Q Consensus       641 g~a~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~  715 (788)
                      |.+.........     ......++..|+|||.+.+..++.++||||||+++|+|++|+.||........          
T Consensus       151 g~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~----------  220 (267)
T cd06628         151 GISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA----------  220 (267)
T ss_pred             CCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH----------
Confidence            999876532111     11234578899999999988899999999999999999999999975321110          


Q ss_pred             HHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          716 WVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       716 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                       ... .....       .+..  +....+.+.+++.+||+.||.+||++.||++
T Consensus       221 -~~~-~~~~~-------~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         221 -IFK-IGENA-------SPEI--PSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             -HHH-HhccC-------CCcC--CcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence             000 00000       0111  1123466788999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=2e-33  Score=296.61  Aligned_cols=248  Identities=24%  Similarity=0.334  Sum_probs=200.5

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .|...+.||.|+||.||+|...  ..+..||+|.+.... ....+.+.+|+.++++++||||+++++++.++...++|||
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDN--RTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIME   82 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEc--cCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence            3455678999999999999876  567789999886432 4456788999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++++|.+++..  ..+++.++..++.|++.||.|||+.   +++|+||+|+||+++     .++.++|+|||++....
T Consensus        83 ~~~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~-----~~~~~~l~dfg~~~~~~  152 (277)
T cd06640          83 YLGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLS-----EQGDVKLADFGVAGQLT  152 (277)
T ss_pred             cCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEc-----CCCCEEEcccccceecc
Confidence            9999999999854  4578889999999999999999998   999999999999998     77889999999997664


Q ss_pred             CCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      .... ......++..|+|||.+.+..++.++||||||+++|||++|+.||.........            ......   
T Consensus       153 ~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~------------~~~~~~---  216 (277)
T cd06640         153 DTQI-KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL------------FLIPKN---  216 (277)
T ss_pred             CCcc-ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh------------hhhhcC---
Confidence            3321 122345788899999998889999999999999999999999998653211100            000000   


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                           .+ ..........+.+++.+||+.+|++||+++++++.
T Consensus       217 -----~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         217 -----NP-PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             -----CC-CCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence                 00 11122345678899999999999999999999865

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=6.3e-34  Score=312.56  Aligned_cols=267  Identities=21%  Similarity=0.244  Sum_probs=195.5

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecC------
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE------  559 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------  559 (788)
                      ..|.+.+.||+|+||.||++...  ..+..||||++....  ....+.+.+|+.+++.++||||+++++++...      
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          24 KRYQNLKPIGSGAQGIVCAAYDA--ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             cceeEEEEeecCCCeEEEEEEEC--CCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            35677789999999999999876  566789999986532  33456788999999999999999999987543      


Q ss_pred             CeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEee
Q 047157          560 DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD  639 (788)
Q Consensus       560 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~D  639 (788)
                      ...++||||+++ +|.+.+.   ..+++..+..++.|++.||.|||++   +|+||||||+|||++     .++.+||+|
T Consensus       102 ~~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~-----~~~~~kL~D  169 (364)
T cd07875         102 QDVYIVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVK-----SDCTLKILD  169 (364)
T ss_pred             CeEEEEEeCCCC-CHHHHHH---hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEEC-----CCCcEEEEe
Confidence            357999999965 7777663   3477888999999999999999999   999999999999998     788999999


Q ss_pred             cCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh----hHH
Q 047157          640 FGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV----LSD  715 (788)
Q Consensus       640 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~----~~~  715 (788)
                      ||+++......  ......++..|+|||++.+..++.++|||||||++|||++|+.||...+..+........    ...
T Consensus       170 fG~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~  247 (364)
T cd07875         170 FGLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE  247 (364)
T ss_pred             CCCccccCCCC--cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence            99998654322  122356899999999999999999999999999999999999999765432211100000    000


Q ss_pred             H-------HHHHhhc-cccc-----ccccC---CCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          716 W-------VISCMLS-RNLQ-----VLVSH---DPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       716 ~-------~~~~~~~-~~~~-----~l~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      +       ....... ....     .+...   .............+.+++.+||+.||++|||+.|++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             HHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            0       0000000 0000     00000   00000011123567899999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.7e-34  Score=304.96  Aligned_cols=251  Identities=25%  Similarity=0.285  Sum_probs=200.3

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchH---HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      |.+.+.||+|++|+||++...  ..+..+++|.+.....   ...+.+.+|++++++++||||+++++.+.+....++||
T Consensus         3 y~~~~~ig~g~~g~vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           3 FKKIKLLGKGDVGRVFLVRLK--GTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             eEEeeeecCCccEEEEEEEEc--CCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            556788999999999999886  5677999998865432   24567899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+.+++|.+++... ...+++..+..++.||+.||+|||+.   +++|+||||+||+++     .++.++|+|||++..
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~-----~~~~~~l~dfg~~~~  152 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLH-----ESGHIMLSDFDLSKQ  152 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEc-----CCCCEEEeecchhhc
Confidence            999999999998653 35688999999999999999999998   999999999999998     778999999999875


Q ss_pred             cCCCCCc----------------------------ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCC
Q 047157          646 LNKDQTR----------------------------TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHI  697 (788)
Q Consensus       646 ~~~~~~~----------------------------~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~  697 (788)
                      .......                            ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf  232 (316)
T cd05574         153 SDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPF  232 (316)
T ss_pred             ccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCC
Confidence            5322110                            111245788999999999889999999999999999999999999


Q ss_pred             CccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC----HHHHHHH
Q 047157          698 ELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS----MKKVIHM  770 (788)
Q Consensus       698 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt----~~evl~~  770 (788)
                      ........       +     ....        ...............+.+++.+||+.||++|||    ++|++..
T Consensus       233 ~~~~~~~~-------~-----~~~~--------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~  289 (316)
T cd05574         233 KGSNRDET-------F-----SNIL--------KKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH  289 (316)
T ss_pred             CCCchHHH-------H-----HHHh--------cCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence            75432111       0     0000        111111111124577889999999999999999    7777763

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=5.4e-34  Score=302.04  Aligned_cols=269  Identities=22%  Similarity=0.263  Sum_probs=195.2

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      |.+.+.||+|++|.||+|...  .++..|++|.+....  ....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (285)
T cd07861           2 YTKIEKIGEGTYGVVYKGRNK--KTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE   79 (285)
T ss_pred             ceEeeEecccCceEEEEEEEC--CCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence            456788999999999999876  567789999886432  2234678899999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhcc--CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          568 LMPNGTLSNFLFHE--GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       568 ~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |++ ++|.+++...  +..+++..+..++.||+.||.|||++   +|+|+||||+||+++     .++.+||+|||++..
T Consensus        80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~-----~~~~~~l~dfg~~~~  150 (285)
T cd07861          80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLID-----NKGVIKLADFGLARA  150 (285)
T ss_pred             cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEc-----CCCcEEECcccceee
Confidence            997 6888888543  25688999999999999999999999   999999999999998     788999999999876


Q ss_pred             cCCCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhH---HHHHHHh
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS---DWVISCM  721 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~  721 (788)
                      ...... ......+++.|+|||.+.+. .++.++||||||+++|||++|+.||.................   .-.+...
T Consensus       151 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
T cd07861         151 FGIPVR-VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGV  229 (285)
T ss_pred             cCCCcc-cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcc
Confidence            543221 12233567899999988654 578999999999999999999999975432111000000000   0000000


Q ss_pred             h-cccccccccCCCCC---cccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          722 L-SRNLQVLVSHDPEV---LSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       722 ~-~~~~~~l~~~~~~~---~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      . ..............   ........++.+++.+||+.||++|||+++|++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~  282 (285)
T cd07861         230 TSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH  282 (285)
T ss_pred             hhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence            0 00000000000000   0001124567789999999999999999999753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=5.8e-34  Score=298.33  Aligned_cols=253  Identities=27%  Similarity=0.407  Sum_probs=202.0

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      +.+.+.||+|++|.||++...  ..+..+++|.+.... ....+++.+|++++++++||||+++++.+...+..++|+||
T Consensus         3 ~~~~~~ig~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           3 LEYLGELGAGNSGVVSKVLHR--PTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             chHHHHhcCCCCeEEEEEEEc--CCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            445678999999999999886  567789999886553 34567889999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhh-ccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE-ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      +++++|.+++......++...+..++.|++.||+|||+ .   +++|+||||+||+++     .++.++|+|||.+....
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~-----~~~~~~l~d~g~~~~~~  152 (265)
T cd06605          81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVN-----SRGQIKLCDFGVSGQLV  152 (265)
T ss_pred             cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEEC-----CCCCEEEeecccchhhH
Confidence            99999999997665778899999999999999999999 7   999999999999998     77899999999987653


Q ss_pred             CCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      .....   ...++..|+|||.+.+..++.++||||||+++|+|++|+.||........      ...+.. .....    
T Consensus       153 ~~~~~---~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~------~~~~~~-~~~~~----  218 (265)
T cd06605         153 NSLAK---TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPD------GIFELL-QYIVN----  218 (265)
T ss_pred             HHHhh---cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccc------cHHHHH-HHHhc----
Confidence            32211   15678899999999998999999999999999999999999965421100      000111 00111    


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                          ..............+.+++..||..||++|||+.+++.+
T Consensus       219 ----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         219 ----EPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             ----CCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence                111111111245668899999999999999999999853

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=5.3e-34  Score=332.32  Aligned_cols=261  Identities=22%  Similarity=0.305  Sum_probs=199.0

Q ss_pred             HHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEec--C
Q 047157          484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE--E  559 (788)
Q Consensus       484 ~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~  559 (788)
                      +.....|.+.+.||+|+||+||++...  ..+..+++|.+...  .......+..|+.++++++||||+++++++.+  .
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAkdk--~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~   86 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVKHK--RTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN   86 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEEC--CCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC
Confidence            334456778899999999999999887  56778999987643  23445688999999999999999999998854  4


Q ss_pred             CeEEEEEecCCCCCHhHhhhcc---CCCCCHHHHHHHHHHHHHHHHHhhhccC----CceEecCCCCCcEEeccCC----
Q 047157          560 DKRLLVYELMPNGTLSNFLFHE---GQRPGWVQRVEIALGVARGLLYLHEECE----TQIIHCDIKPQNVLLDLKT----  628 (788)
Q Consensus       560 ~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~----~~ivH~dlkp~NIll~~~~----  628 (788)
                      ...+|||||+++++|.++|...   ...+++..++.|+.||+.||.|||+...    .+||||||||+||||+...    
T Consensus        87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg  166 (1021)
T PTZ00266         87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG  166 (1021)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence            5789999999999999998642   3568999999999999999999998521    2599999999999996321    


Q ss_pred             --------CCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccC--CCCCccCcchhhHHHHHHHHhCCCCCC
Q 047157          629 --------LDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN--VPVTTKVDVFSFGVMLLEIICGRRHIE  698 (788)
Q Consensus       629 --------~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~k~DVwSlGvil~elltg~~p~~  698 (788)
                              ......+||+|||++..+.....  .....||+.|+|||++.+  ..++.++||||||||||||++|+.||.
T Consensus       167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~--~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~  244 (1021)
T PTZ00266        167 KITAQANNLNGRPIAKIGDFGLSKNIGIESM--AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH  244 (1021)
T ss_pred             cccccccccCCCCceEEccCCcccccccccc--ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence                    11345699999999986643221  223568999999999854  458899999999999999999999996


Q ss_pred             ccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          699 LSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       699 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ......          ... ..+...         +.. ........+.+|+..||+.+|.+||++.|++.
T Consensus       245 ~~~~~~----------qli-~~lk~~---------p~l-pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        245 KANNFS----------QLI-SELKRG---------PDL-PIKGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             cCCcHH----------HHH-HHHhcC---------CCC-CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            432111          101 111110         000 00112456888999999999999999999984

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.1e-35  Score=308.04  Aligned_cols=251  Identities=24%  Similarity=0.362  Sum_probs=211.7

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      ..+...||.|+||.||+++.+  .++...|-|.+........++++-|++||....||+||++++.|..++.++|+.|||
T Consensus        34 WeIiGELGDGAFGKVyKA~nk--et~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC  111 (1187)
T KOG0579|consen   34 WEIIGELGDGAFGKVYKAVNK--ETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC  111 (1187)
T ss_pred             HHHHhhhcCccchhhhhhhcc--cchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence            455678999999999999887  777778889998888888899999999999999999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      .||-.+..+..-++.+.+.++.-++.|++.||.|||++   +|||||||..|||++     -+|.++|+|||.+......
T Consensus       112 ~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~T-----ldGdirLADFGVSAKn~~t  183 (1187)
T KOG0579|consen  112 GGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLT-----LDGDIRLADFGVSAKNKST  183 (1187)
T ss_pred             CCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEE-----ecCcEeeecccccccchhH
Confidence            99999999988889999999999999999999999999   999999999999999     8889999999998754322


Q ss_pred             CCcccccccCCccccCcccc-----cCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          650 QTRTDTNMRGTMGYVAPEWL-----RNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~-----~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                       ......+.||+.|||||+.     +..+|+.++||||||++|.||.-+.+|-...+..       ..+..     +   
T Consensus       184 -~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM-------RVllK-----i---  247 (1187)
T KOG0579|consen  184 -RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM-------RVLLK-----I---  247 (1187)
T ss_pred             -HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH-------HHHHH-----H---
Confidence             2223457899999999976     5678999999999999999999999886432110       01111     0   


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                          .-...|....+......+.+++.+||..||..||++.+++++
T Consensus       248 ----aKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H  289 (1187)
T KOG0579|consen  248 ----AKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH  289 (1187)
T ss_pred             ----hhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence                011244455566778889999999999999999999999864

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=8.1e-34  Score=321.67  Aligned_cols=270  Identities=18%  Similarity=0.238  Sum_probs=189.2

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC------ccccceEeeEEecC-C
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH------HKNLVRLLGFCSEE-D  560 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~------hpniv~~~~~~~~~-~  560 (788)
                      ..|.+.++||+|+||+||+|.+.  ..+..||||+++... ...+.+..|+++++.++      |++++++++++..+ .
T Consensus       129 ~~y~i~~~lG~G~fg~V~~a~~~--~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~  205 (467)
T PTZ00284        129 QRFKILSLLGEGTFGKVVEAWDR--KRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETG  205 (467)
T ss_pred             CcEEEEEEEEeccCEEEEEEEEc--CCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCc
Confidence            45677899999999999999886  567789999986432 22334455666665554      55689999988764 5


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhh-ccCCceEecCCCCCcEEeccCCC----------
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE-ECETQIIHCDIKPQNVLLDLKTL----------  629 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~~~----------  629 (788)
                      ..++|||++ +++|.+++.+. ..+++..+..|+.||+.||.|||+ .   +|+||||||+|||++..+.          
T Consensus       206 ~~~iv~~~~-g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~~~~~~~~  280 (467)
T PTZ00284        206 HMCIVMPKY-GPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVDPVTNRAL  280 (467)
T ss_pred             eEEEEEecc-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCccccccccccc
Confidence            788999988 77888888654 568899999999999999999997 5   8999999999999974321          


Q ss_pred             -CCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCcccccccccc
Q 047157          630 -DTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEE  708 (788)
Q Consensus       630 -~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~  708 (788)
                       .+...+||+|||.+.....    ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+....
T Consensus       281 ~~~~~~vkl~DfG~~~~~~~----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~  356 (467)
T PTZ00284        281 PPDPCRVRICDLGGCCDERH----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHL  356 (467)
T ss_pred             CCCCceEEECCCCccccCcc----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence             0123599999998764322    22346789999999999999999999999999999999999999976543221111


Q ss_pred             chhhh----HHHHHH--------Hhhc-ccccccccC-------CCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 047157          709 VDIVL----SDWVIS--------CMLS-RNLQVLVSH-------DPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI  768 (788)
Q Consensus       709 ~~~~~----~~~~~~--------~~~~-~~~~~l~~~-------~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl  768 (788)
                      ....+    ..|...        .... ..+......       .............+.+|+.+||+.||++|||++|++
T Consensus       357 i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L  436 (467)
T PTZ00284        357 MEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMT  436 (467)
T ss_pred             HHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHh
Confidence            00000    001000        0000 000000000       000000111235678999999999999999999999


Q ss_pred             H
Q 047157          769 H  769 (788)
Q Consensus       769 ~  769 (788)
                      +
T Consensus       437 ~  437 (467)
T PTZ00284        437 T  437 (467)
T ss_pred             c
Confidence            7

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=1.4e-33  Score=293.71  Aligned_cols=246  Identities=31%  Similarity=0.510  Sum_probs=195.6

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      ..+.+.+.||+|+||.||++..    .+..+++|.+....  ..+.+.+|+.++++++||||+++++++... ..++|||
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~----~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e   78 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY----TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVME   78 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc----CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEE
Confidence            4567789999999999999864    45579999886542  346788999999999999999999998654 5799999


Q ss_pred             cCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          568 LMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      |+++++|.+++.... ..+++..++.++.|++.||.|||+.   +++||||||+||+++     .++.+||+|||.+...
T Consensus        79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~-----~~~~~kl~Dfg~~~~~  150 (254)
T cd05083          79 LMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVS-----EDGVAKVSDFGLARVG  150 (254)
T ss_pred             CCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEc-----CCCcEEECCCccceec
Confidence            999999999997553 3578999999999999999999998   999999999999998     7789999999998754


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ....    .....+..|+|||.+.+..++.++||||||+++|||++ |+.||......+.            ......+.
T Consensus       151 ~~~~----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~------------~~~~~~~~  214 (254)
T cd05083         151 SMGV----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEV------------KECVEKGY  214 (254)
T ss_pred             cccC----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHH------------HHHHhCCC
Confidence            3221    12234567999999988899999999999999999997 8999865432111            01111110


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                       .      +.  ......+.+.+++.+||+.+|++||+++++++.|++
T Consensus       215 -~------~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         215 -R------ME--PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             -C------CC--CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence             0      00  011234677899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=2.1e-33  Score=294.44  Aligned_cols=248  Identities=24%  Similarity=0.326  Sum_probs=190.4

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccc-----hHHHHHHHHHHHHHhcCCCccccceEeeEEec--CCeE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-----IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE--EDKR  562 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~  562 (788)
                      +...+.||+|+||.||+|...  .++..+++|.+...     ..+..+.+.+|+.++++++||||+++++++.+  ....
T Consensus         4 ~~~~~~lg~g~~g~vy~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           4 WRRGKLLGQGAFGRVYLCYDV--DTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             ccccceecCCCCEEEEEEEEc--CCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            455689999999999999876  56778999987532     12344678899999999999999999998865  3578


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++++||+++++|.+++... ..+++..++.++.|++.||.|||+.   +|+|+||||+||+++     .++.+||+|||+
T Consensus        82 ~l~~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~-----~~~~~~l~dfg~  152 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAY-GALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRD-----SAGNVKLGDFGA  152 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEC-----CCCCEEEccCCC
Confidence            8999999999999999654 4578889999999999999999998   999999999999998     778999999999


Q ss_pred             ccccCCCCC--cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          643 SKLLNKDQT--RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       643 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      +........  .......++..|+|||.+.+..++.++||||||+++|||++|+.||........           ....
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~-----------~~~~  221 (266)
T cd06651         153 SKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA-----------IFKI  221 (266)
T ss_pred             ccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH-----------HHHH
Confidence            876543211  111234578899999999988899999999999999999999999964321110           0000


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .....       .+..  +....+.+.+++ +||..+|++||+++||++
T Consensus       222 ~~~~~-------~~~~--~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         222 ATQPT-------NPQL--PSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             hcCCC-------CCCC--chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            00000       0111  111223344455 688899999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=1e-33  Score=300.06  Aligned_cols=269  Identities=22%  Similarity=0.283  Sum_probs=198.8

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      |.+.+.||+|++|.||+|..+  .++..|++|++....  ....+.+.+|++++++++||||+++++++......++|||
T Consensus         3 y~~~~~l~~g~~~~v~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           3 YEKLSKIGEGSYGVVFKCRNR--ETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             eeeeeeecccCCeEEEEEEEC--CCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            556788999999999999886  567799999886432  2334568899999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++++|..++.. ...+++..+..++.||+.||.|||+.   +++|+||||+||+++     .++.+||+|||++....
T Consensus        81 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~-----~~~~~~l~dfg~~~~~~  151 (286)
T cd07847          81 YCDHTVLNELEKN-PRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILIT-----KQGQIKLCDFGFARILT  151 (286)
T ss_pred             ccCccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEc-----CCCcEEECccccceecC
Confidence            9999888877644 34689999999999999999999998   999999999999998     77899999999998765


Q ss_pred             CCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHH---HHHhhc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV---ISCMLS  723 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~  723 (788)
                      .... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+...........+.   ......
T Consensus       152 ~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (286)
T cd07847         152 GPGD-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFST  230 (286)
T ss_pred             CCcc-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccc
Confidence            4322 1223456788999999865 5678999999999999999999999975432211110000000000   000000


Q ss_pred             cc-ccccccCCCCCcccH-----HHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          724 RN-LQVLVSHDPEVLSDL-----ERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       724 ~~-~~~l~~~~~~~~~~~-----~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .. ...+..+.+......     .....+.+++.+||+.||++||++.|++.+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~  283 (286)
T cd07847         231 NQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH  283 (286)
T ss_pred             ccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence            00 000000111111111     124668899999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=7.9e-34  Score=302.67  Aligned_cols=245  Identities=22%  Similarity=0.346  Sum_probs=197.0

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGT  573 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~gs  573 (788)
                      ..||+|+||.||++...  ..+..|++|.+........+.+.+|+.++..++||||+++++++..++..++|+||+++++
T Consensus        27 ~~ig~g~~g~v~~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~  104 (297)
T cd06659          27 IKIGEGSTGIVCIAREK--HSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA  104 (297)
T ss_pred             hhcCCCCceeEEEEEEc--CCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence            47999999999999876  5567899999865545556778899999999999999999999999999999999999999


Q ss_pred             HhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCcc
Q 047157          574 LSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT  653 (788)
Q Consensus       574 L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~  653 (788)
                      |.+++..  ..+++..+..++.|++.||.|||+.   +++|+||||+||+++     .++.+||+|||++........ .
T Consensus       105 L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~-----~~~~~kL~dfg~~~~~~~~~~-~  173 (297)
T cd06659         105 LTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLT-----LDGRVKLSDFGFCAQISKDVP-K  173 (297)
T ss_pred             HHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEc-----cCCcEEEeechhHhhcccccc-c
Confidence            9998743  4678999999999999999999999   999999999999998     788999999999875543222 1


Q ss_pred             cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCC
Q 047157          654 DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHD  733 (788)
Q Consensus       654 ~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  733 (788)
                      .....++..|+|||.+.+..++.++||||||+++|||++|+.||......+..        .    ......       .
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~--------~----~~~~~~-------~  234 (297)
T cd06659         174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM--------K----RLRDSP-------P  234 (297)
T ss_pred             ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--------H----HHhccC-------C
Confidence            22356889999999999889999999999999999999999999643211100        0    000000       0


Q ss_pred             CCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          734 PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       734 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      +...........+.+++.+||+.+|++||++++++++
T Consensus       235 ~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         235 PKLKNAHKISPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             CCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            0000111223567789999999999999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=2.3e-33  Score=292.16  Aligned_cols=249  Identities=23%  Similarity=0.353  Sum_probs=199.9

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      |.+.+.||+|+||.||++...  .++..+++|.+...  .....+.+.+|++++++++||||+++++.+..++..++|+|
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08220           2 YEKIRVVGRGAFGIVHLCRRK--ADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME   79 (256)
T ss_pred             ceEEEEecccCceEEEEEEEc--CCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence            556789999999999999886  56778999988643  23446789999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          568 LMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       568 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      |+++++|.+++... ...+++..+..++.|++.+|.|||++   +++|+||+|+||+++.    .+..+||+|||.+...
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~----~~~~~~l~d~~~~~~~  152 (256)
T cd08220          80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDK----HKMVVKIGDFGISKIL  152 (256)
T ss_pred             cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcC----CCCEEEEccCCCceec
Confidence            99999999999764 34578999999999999999999999   9999999999999972    3456899999999876


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      .....  .....++..|+|||.+.+..++.++||||||+++|+|++|+.||........           ... ......
T Consensus       153 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~-----------~~~-~~~~~~  218 (256)
T cd08220         153 SSKSK--AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL-----------VLK-IMSGTF  218 (256)
T ss_pred             CCCcc--ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH-----------HHH-HHhcCC
Confidence            43322  1234578899999999988899999999999999999999999865422110           000 111111


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ..+         .......+.+++.+||+.||++|||++|++++
T Consensus       219 ~~~---------~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         219 API---------SDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             CCC---------CCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            111         11234567889999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.6e-33  Score=298.58  Aligned_cols=252  Identities=25%  Similarity=0.328  Sum_probs=193.4

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEe-----cCCeE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCS-----EEDKR  562 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~-----~~~~~  562 (788)
                      +|.+.+.||+|+||.||++...  ..+..+++|.+... ......+.+|+.+++++ +||||+++++++.     .++..
T Consensus        19 ~~~~~~~lg~g~~~~vy~~~~~--~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~   95 (286)
T cd06638          19 TWEIIETIGKGTYGKVFKVLNK--KNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQL   95 (286)
T ss_pred             ceeeeeeeccCCCcEEEEEEEC--CCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeE
Confidence            4556688999999999999886  56678999987643 22345778899999999 6999999999874     44578


Q ss_pred             EEEEecCCCCCHhHhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEee
Q 047157          563 LLVYELMPNGTLSNFLFH---EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD  639 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~D  639 (788)
                      ++||||+++++|.+++..   ....+++..+..++.|+++||.|||+.   +|+||||||+||+++     .++.+||+|
T Consensus        96 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~-----~~~~~kl~d  167 (286)
T cd06638          96 WLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLT-----TEGGVKLVD  167 (286)
T ss_pred             EEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEEC-----CCCCEEEcc
Confidence            999999999999998753   335678899999999999999999998   999999999999998     777899999


Q ss_pred             cCCccccCCCCCcccccccCCccccCccccc-----CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhH
Q 047157          640 FGISKLLNKDQTRTDTNMRGTMGYVAPEWLR-----NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS  714 (788)
Q Consensus       640 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~  714 (788)
                      ||++........ ......|+..|+|||.+.     ...++.++||||||+++|||++|+.||........       ..
T Consensus       168 fg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~-------~~  239 (286)
T cd06638         168 FGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA-------LF  239 (286)
T ss_pred             CCceeecccCCC-ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH-------Hh
Confidence            999886543221 122346889999999875     34578899999999999999999999864321110       00


Q ss_pred             HHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          715 DWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       715 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                      .     .....       .+...........+.+++.+||+.||++|||+.||++.+
T Consensus       240 ~-----~~~~~-------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~  284 (286)
T cd06638         240 K-----IPRNP-------PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV  284 (286)
T ss_pred             h-----ccccC-------CCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence            0     00000       000001111234688899999999999999999998753

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-34  Score=307.98  Aligned_cols=249  Identities=24%  Similarity=0.368  Sum_probs=205.5

Q ss_pred             cccccccccccceEEEEEEec-cCcceeeeeeecccchHH-HHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          491 GFSKLVGTGSSGKVYRGILRL-KDTQIEIAVKKLEKDIEK-TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .+.|+||+|.||.|++|.+.. .++...||||.++.+... ...+|++|+.+|.+|+|||++++||+..+ ....+|+|.
T Consensus       113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL  191 (1039)
T KOG0199|consen  113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL  191 (1039)
T ss_pred             HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence            446899999999999999874 344568999999876543 67899999999999999999999999887 788999999


Q ss_pred             CCCCCHhHhhhc-cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          569 MPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       569 ~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      ++.|+|.+.|++ ....+-......++.|||.|+.||..+   +.|||||..+|+|+.     ....+||+|||+.+.+.
T Consensus       192 aplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNllla-----sprtVKI~DFGLmRaLg  263 (1039)
T KOG0199|consen  192 APLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLA-----SPRTVKICDFGLMRALG  263 (1039)
T ss_pred             cccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheec-----ccceeeeecccceeccC
Confidence            999999999987 455677888889999999999999999   999999999999998     67799999999999876


Q ss_pred             CCCCc-cc-ccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          648 KDQTR-TD-TNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       648 ~~~~~-~~-~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ..... .+ ....-...|+|||.++..+++.++|||+|||+||||++ |..||-+.......                  
T Consensus       264 ~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL------------------  325 (1039)
T KOG0199|consen  264 ENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQIL------------------  325 (1039)
T ss_pred             CCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHH------------------
Confidence            54332 22 22334668999999999999999999999999999997 66888765432211                  


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                         ..++............+++.++++.||..+|++|||+..|.+
T Consensus       326 ---~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~  367 (1039)
T KOG0199|consen  326 ---KNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRE  367 (1039)
T ss_pred             ---HhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHH
Confidence               112223333344556788999999999999999999999974

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.1e-34  Score=307.68  Aligned_cols=247  Identities=23%  Similarity=0.373  Sum_probs=196.1

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeecc--c--chHHHHHHHHHHHHHhcCCCccccceEeeEEecCCe--EEE
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLE--K--DIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDK--RLL  564 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~--~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--~~l  564 (788)
                      +|.++||+|+|-+||+|.+.  .++..||=-.++  +  ..+...++|..|+++|+.|+||||+++++...+...  .-+
T Consensus        43 k~~evLGrGafKtVYka~De--~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~  120 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDE--EEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINF  120 (632)
T ss_pred             ehhhhcccccceeeeecccc--ccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeee
Confidence            34578999999999999986  667676644332  1  124456899999999999999999999998877554  789


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |+|.+..|+|..|+.+. ++.+...+..|++||++||.|||++ .|+|||||||-+||+|+    ..-+.|||+|+|+|.
T Consensus       121 iTEL~TSGtLr~Y~kk~-~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFin----G~~G~VKIGDLGLAt  194 (632)
T KOG0584|consen  121 ITELFTSGTLREYRKKH-RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVN----GNLGEVKIGDLGLAT  194 (632)
T ss_pred             eeecccCCcHHHHHHHh-ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEc----CCcCceeecchhHHH
Confidence            99999999999999655 6788899999999999999999996 67999999999999998    367899999999999


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .+.....   ....|||.|||||... ..|++.+||||||+.++||+|+..||.-......           +.....++
T Consensus       195 l~r~s~a---ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQ-----------IYKKV~SG  259 (632)
T KOG0584|consen  195 LLRKSHA---KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQ-----------IYKKVTSG  259 (632)
T ss_pred             Hhhcccc---ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHH-----------HHHHHHcC
Confidence            8765433   2368999999999987 6899999999999999999999999964422111           11222222


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ....-+..       . .-.++.++|..||.. .++|||+.|+|.
T Consensus       260 iKP~sl~k-------V-~dPevr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  260 IKPAALSK-------V-KDPEVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             CCHHHhhc-------c-CCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence            22222111       0 124567889999998 999999999995

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=4.2e-34  Score=302.81  Aligned_cols=269  Identities=19%  Similarity=0.225  Sum_probs=195.8

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      |.+.+.||+|+||.||+|...  .++..+++|.+....  ......+.+|++++++++||||+++++++.+....++|+|
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~--~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   79 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNR--ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE   79 (284)
T ss_pred             ceeEEEecccCCeEEEEEEEC--CCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence            456788999999999999886  567789999886432  2234567889999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |++ ++|.+++......+++..+..++.||++||.|||++   +|+|+||||+||+++     .++.+||+|||++....
T Consensus        80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~-----~~~~~~l~dfg~~~~~~  150 (284)
T cd07839          80 YCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLIN-----KNGELKLADFGLARAFG  150 (284)
T ss_pred             cCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEc-----CCCcEEECccchhhccC
Confidence            996 588888876666789999999999999999999999   999999999999998     77899999999998654


Q ss_pred             CCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCcccccccc-ccchhhh---HHHHHHHhh
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEES-EEVDIVL---SDWVISCML  722 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~-~~~~~~~---~~~~~~~~~  722 (788)
                      .... ......++..|+|||.+.+. .++.++||||||+++|||++|+.|+......... .......   ....+....
T Consensus       151 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
T cd07839         151 IPVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVS  229 (284)
T ss_pred             CCCC-CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhh
Confidence            3221 12234568899999988664 4789999999999999999999986433211100 0000000   000000000


Q ss_pred             cccccccccCCCCCc----ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          723 SRNLQVLVSHDPEVL----SDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~----~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ...-...........    ......+.+.+++.+||+.||.+|||++|++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h  281 (284)
T cd07839         230 KLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH  281 (284)
T ss_pred             hcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence            000000000000000    001234577889999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2.7e-33  Score=296.92  Aligned_cols=251  Identities=25%  Similarity=0.368  Sum_probs=196.9

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      +.+.+.||+|+||.||++...  ..+..+|+|.+... .......+.+|++++++++||||+++++.+...+..++||||
T Consensus         3 ~~~~~~ig~g~~g~v~~~~~~--~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           3 IEVLDELGKGNYGSVYKVLHR--PTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             hhhhhhhcccCCeEEEEEEEc--CCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            556789999999999999886  56779999988653 234456889999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhcc--CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          569 MPNGTLSNFLFHE--GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       569 ~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      +++++|..++...  ...+++..+..++.||+.||.|||+.  .+|+|+||||+||+++     .++.+||+|||++...
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~-----~~~~~~l~dfg~~~~~  153 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVN-----GNGQVKLCDFGVSGNL  153 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEEC-----CCCCEEEeecCCcccc
Confidence            9999999988653  23689999999999999999999963  2899999999999998     7789999999998765


Q ss_pred             CCCCCcccccccCCccccCcccccCC------CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNV------PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~------~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      .....   ....++..|+|||.+.+.      .++.++||||||+++|+|++|+.||........       . . ....
T Consensus       154 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-------~-~-~~~~  221 (286)
T cd06622         154 VASLA---KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI-------F-A-QLSA  221 (286)
T ss_pred             cCCcc---ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH-------H-H-HHHH
Confidence            33221   224578899999998544      358899999999999999999999964321110       0 0 0000


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .....       .+.  ........+.+++.+||+.+|++||++++++..
T Consensus       222 ~~~~~-------~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         222 IVDGD-------PPT--LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             HhhcC-------CCC--CCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence            01110       011  112245677889999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=2.1e-33  Score=292.58  Aligned_cols=249  Identities=22%  Similarity=0.306  Sum_probs=200.4

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      |.+.+.||+|+||.||++...  .++..+++|.+...  .....+++.+|+.++++++||||+++++++.+.+..++|+|
T Consensus         2 y~~~~~lg~g~~g~~~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08218           2 YVKVKKIGEGSFGKAILVKSK--EDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD   79 (256)
T ss_pred             ceEEEEeccCCceEEEEEEEc--CCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence            556789999999999999876  56678999988643  23445688999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          568 LMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       568 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      |+++++|.+++... ...+++.++..++.|++.||.|||++   +++|+||+|+||+++     .+..++|+|||.+...
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~-----~~~~~~l~d~~~~~~~  151 (256)
T cd08218          80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLT-----KDGTIKLGDFGIARVL  151 (256)
T ss_pred             cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEc-----CCCCEEEeeccceeec
Confidence            99999999998654 34578899999999999999999998   999999999999998     7788999999999865


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      ...... .....++..|+|||.+.+..++.++||||||+++++|++|+.||......+           .... ...+..
T Consensus       152 ~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~-----------~~~~-~~~~~~  218 (256)
T cd08218         152 NSTVEL-ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN-----------LVLK-IIRGSY  218 (256)
T ss_pred             Ccchhh-hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH-----------HHHH-HhcCCC
Confidence            432221 123457889999999998899999999999999999999999986432111           1111 111111


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .       .  ........+.+++.+||+.+|++||++.+|+++
T Consensus       219 ~-------~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         219 P-------P--VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             C-------C--CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            0       0  111234568889999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=1.9e-33  Score=294.62  Aligned_cols=249  Identities=25%  Similarity=0.344  Sum_probs=195.9

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch------HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI------EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      +...+.||+|+||.||+|..   .++..+|+|.+....      ....+.+.+|++++++++|+||+++++++.+.+..+
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~---~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   78 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLT---NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTIS   78 (265)
T ss_pred             ccccceEeccCCeEEEEEEE---cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEE
Confidence            44567899999999999976   356689999875321      233457889999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +|+||+++++|.+++.+. ..+++..+..++.|++.||+|||+.   +|+|+||+|+||+++     .++.++|+|||++
T Consensus        79 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~-----~~~~~~l~dfg~~  149 (265)
T cd06631          79 IFMEFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLM-----PNGIIKLIDFGCA  149 (265)
T ss_pred             EEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEEC-----CCCeEEeccchhh
Confidence            999999999999999654 4578889999999999999999998   999999999999998     7889999999998


Q ss_pred             cccCCCC-----CcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHH
Q 047157          644 KLLNKDQ-----TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVI  718 (788)
Q Consensus       644 ~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  718 (788)
                      .......     ........++..|+|||.+.+..++.++||||||+++|+|++|+.||...+.....          ..
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~----------~~  219 (265)
T cd06631         150 RRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM----------FY  219 (265)
T ss_pred             HhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH----------HH
Confidence            7643211     11122346788999999999889999999999999999999999999643211100          00


Q ss_pred             HHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          719 SCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       719 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ........       +.  ......+.+.+++.+||+.+|++||++.|+++
T Consensus       220 ~~~~~~~~-------~~--~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         220 IGAHRGLM-------PR--LPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             hhhccCCC-------CC--CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            00000000       00  11123466788999999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=9.8e-34  Score=308.56  Aligned_cols=266  Identities=23%  Similarity=0.287  Sum_probs=193.4

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecC------
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE------  559 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------  559 (788)
                      ..|.+.+.||+|+||.||+|...  .++..||||.+....  ....+.+.+|++++++++||||+++++++...      
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          15 ERYQNLTPVGSGAYGSVCSAYDT--RLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhheecccCCCeEEEEEEEC--CCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            34666789999999999999876  567799999986532  22345678999999999999999999987543      


Q ss_pred             CeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEee
Q 047157          560 DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD  639 (788)
Q Consensus       560 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~D  639 (788)
                      ...++++|++ +++|.+++.  ...+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~-----~~~~~kl~D  161 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVK--CQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVN-----EDCELRILD  161 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEEC-----CCCCEEEcC
Confidence            4578999988 789988874  34688999999999999999999999   999999999999998     788999999


Q ss_pred             cCCccccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh---hHH
Q 047157          640 FGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV---LSD  715 (788)
Q Consensus       640 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~---~~~  715 (788)
                      ||++......    .....++..|+|||++.+ ..++.++||||||+++|+|++|+.||...............   ...
T Consensus       162 fg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  237 (343)
T cd07878         162 FGLARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSP  237 (343)
T ss_pred             CccceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence            9999865432    223468999999999876 57899999999999999999999999754321110000000   000


Q ss_pred             HHHHHhhcccccccccCCCCCcc-c-----HHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          716 WVISCMLSRNLQVLVSHDPEVLS-D-----LERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       716 ~~~~~~~~~~~~~l~~~~~~~~~-~-----~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ..............+...+.... .     ....+.+.+++.+||+.||++|||++|++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         238 EVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             HHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            00000000000000000000000 0     0112346789999999999999999999964

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=3e-33  Score=289.99  Aligned_cols=250  Identities=25%  Similarity=0.407  Sum_probs=204.7

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      |...+.||+|++|.||++...  .++..+++|++........+.+.+|++.+++++|||++++++++......++++||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~   79 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHK--RTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFC   79 (253)
T ss_pred             ceeeeeeccCCceEEEEEEEC--CCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecC
Confidence            345688999999999999886  466789999997765556778999999999999999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|.+++......+++..+..++.|++.||.|||+.   +++|+||+|+||+++     +++.++|+|||.+......
T Consensus        80 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~-----~~~~~~l~d~~~~~~~~~~  151 (253)
T cd05122          80 SGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLT-----SDGEVKLIDFGLSAQLSDT  151 (253)
T ss_pred             CCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEc-----cCCeEEEeecccccccccc
Confidence            99999999977656789999999999999999999998   999999999999998     7889999999999876544


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      ..  .....++..|+|||.+.+..++.++||||||+++|+|++|+.||.........           . ......    
T Consensus       152 ~~--~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-----------~-~~~~~~----  213 (253)
T cd05122         152 KA--RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKAL-----------F-KIATNG----  213 (253)
T ss_pred             cc--ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHH-----------H-HHHhcC----
Confidence            32  23456788999999998888999999999999999999999998654211100           0 000010    


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                         .+...........+.+++.+||+.||++|||+.|++++
T Consensus       214 ---~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~  251 (253)
T cd05122         214 ---PPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH  251 (253)
T ss_pred             ---CCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence               11111111224678899999999999999999999864

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=3.3e-33  Score=292.34  Aligned_cols=251  Identities=29%  Similarity=0.410  Sum_probs=200.0

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchH--HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE--KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      |...+.||+|+||.||+|...  .++..+++|.+.....  ...+.+.+|++++++++|+||+++++++.+.+..++|+|
T Consensus         2 y~~~~~lg~G~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAVNL--DTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME   79 (264)
T ss_pred             ceeeeEeecCCCcEEEEEEEC--CCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence            556789999999999999875  5667899999865443  367789999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++++|.+++.+. ..+++..+..++.|++.||.|||+.   +|+|+||+|+||+++     .++.+||+|||.+....
T Consensus        80 ~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~-----~~~~~kl~d~g~~~~~~  150 (264)
T cd06626          80 YCSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLD-----HNGVIKLGDFGCAVKLK  150 (264)
T ss_pred             cCCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEC-----CCCCEEEcccccccccC
Confidence            99999999998654 4578889999999999999999999   999999999999998     78899999999998765


Q ss_pred             CCCCcccc---cccCCccccCcccccCCC---CCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          648 KDQTRTDT---NMRGTMGYVAPEWLRNVP---VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       648 ~~~~~~~~---~~~gt~~y~aPE~~~~~~---~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      ........   ...++..|+|||.+.+..   ++.++||||||+++||+++|+.||.......       ..   ... .
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-------~~---~~~-~  219 (264)
T cd06626         151 NNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-------QI---MFH-V  219 (264)
T ss_pred             CCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-------HH---HHH-H
Confidence            43322211   345788999999998766   8899999999999999999999996432100       00   000 0


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ...       ..+...........+.+++.+||+.+|++|||++|++.
T Consensus       220 ~~~-------~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         220 GAG-------HKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             hcC-------CCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            000       11111112223456778999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=2.5e-33  Score=293.08  Aligned_cols=249  Identities=22%  Similarity=0.322  Sum_probs=199.5

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEec--CCeEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE--EDKRLLV  565 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~lV  565 (788)
                      |.+.+.||.|+||.||++...  .++..+++|.+...  .....+++.+|++++++++||||+++++++..  ....+++
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~   79 (265)
T cd08217           2 YEVLETIGKGSFGTVRKVRRK--SDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV   79 (265)
T ss_pred             ceeeeeeccCCCeEEEEeeec--CCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence            456688999999999999876  56678999988642  24455678899999999999999999997754  4568999


Q ss_pred             EecCCCCCHhHhhhcc---CCCCCHHHHHHHHHHHHHHHHHhh-----hccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          566 YELMPNGTLSNFLFHE---GQRPGWVQRVEIALGVARGLLYLH-----EECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH-----~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                      |||+++++|.+++...   ...+++..++.++.||+.||.|||     +.   +++|+||||+||+++     .++.+||
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~-----~~~~~kl  151 (265)
T cd08217          80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLD-----ANNNVKL  151 (265)
T ss_pred             ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEe-----cCCCEEE
Confidence            9999999999998653   457899999999999999999999     66   999999999999998     7889999


Q ss_pred             eecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHH
Q 047157          638 SDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV  717 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~  717 (788)
                      +|||++......... .....++..|+|||.+.+..++.++||||||+++|+|++|+.||.......        ..   
T Consensus       152 ~d~g~~~~~~~~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--------~~---  219 (265)
T cd08217         152 GDFGLAKILGHDSSF-AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ--------LA---  219 (265)
T ss_pred             ecccccccccCCccc-ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHH--------HH---
Confidence            999999876543321 223467899999999998889999999999999999999999997543111        11   


Q ss_pred             HHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       718 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                       .....+....         ........+.+++.+|++.+|++||++++|+++
T Consensus       220 -~~~~~~~~~~---------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         220 -SKIKEGKFRR---------IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             -HHHhcCCCCC---------CccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence             1111111111         112334678899999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=3e-33  Score=294.34  Aligned_cols=255  Identities=25%  Similarity=0.411  Sum_probs=197.0

Q ss_pred             cccccccccccceEEEEEEecc-Ccceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCC------e
Q 047157          491 GFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED------K  561 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------~  561 (788)
                      .+.+.||+|+||.||+|..... ..+..||||.+....  ....+++.+|++++++++||||+++++++...+      .
T Consensus         2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   81 (273)
T cd05074           2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI   81 (273)
T ss_pred             cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence            4567899999999999987632 356789999886542  345677899999999999999999999886532      2


Q ss_pred             EEEEEecCCCCCHhHhhhcc-----CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEE
Q 047157          562 RLLVYELMPNGTLSNFLFHE-----GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAK  636 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~k  636 (788)
                      .++++||+++++|.+++...     ...+++.....++.||+.||+|||+.   +|+||||||+||+++     .++.+|
T Consensus        82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~-----~~~~~k  153 (273)
T cd05074          82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLN-----ENMTVC  153 (273)
T ss_pred             eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEc-----CCCCEE
Confidence            47899999999999887432     22468889999999999999999998   999999999999998     788999


Q ss_pred             EeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhH
Q 047157          637 ISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLS  714 (788)
Q Consensus       637 L~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~  714 (788)
                      |+|||.+......... ......++..|++||.+....++.++||||||+++|||++ |+.||......+        ..
T Consensus       154 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~--------~~  225 (273)
T cd05074         154 VADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE--------IY  225 (273)
T ss_pred             ECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH--------HH
Confidence            9999999866432211 1122345678999999998889999999999999999999 888886432211        11


Q ss_pred             HHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          715 DWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       715 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      .+.    ....  .       ..........+.+++.+||+.+|++||++.|+++.|+++
T Consensus       226 ~~~----~~~~--~-------~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         226 NYL----IKGN--R-------LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             HHH----HcCC--c-------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            111    0000  0       001112346788999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-35  Score=318.42  Aligned_cols=254  Identities=28%  Similarity=0.427  Sum_probs=210.4

Q ss_pred             ccccccccccceEEEEEEeccCc--ceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          492 FSKLVGTGSSGKVYRGILRLKDT--QIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       492 ~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      -.++||+|+||+||+|.+-.++.  +.+||+|.+.... .+..+++..|+-+|.+++||||++++++|.... ..||++|
T Consensus       700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~  778 (1177)
T KOG1025|consen  700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL  778 (1177)
T ss_pred             hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence            35789999999999999875433  4578999886543 455679999999999999999999999998776 8899999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      |+.|+|.++++.++..+..+..+.|..|||+||.|||++   .++||||..+|||+.     .-..+||.|||+++.+..
T Consensus       779 mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVk-----sP~hvkitdfgla~ll~~  850 (1177)
T KOG1025|consen  779 MPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVK-----SPNHVKITDFGLAKLLAP  850 (1177)
T ss_pred             cccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeec-----CCCeEEEEecchhhccCc
Confidence            999999999999888999999999999999999999999   999999999999998     667899999999999876


Q ss_pred             CCCcccc-cccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          649 DQTRTDT-NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       649 ~~~~~~~-~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      +...... ...-.+.|||-|.+....++.++|||||||++||++| |..|+++....+.                     
T Consensus       851 d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI---------------------  909 (1177)
T KOG1025|consen  851 DEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI---------------------  909 (1177)
T ss_pred             ccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh---------------------
Confidence            6544322 2233567999999999999999999999999999997 8899887654332                     


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      .+++....+...+......+..++.+||..|++.||+++++...+.+..
T Consensus       910 ~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a  958 (1177)
T KOG1025|consen  910 PDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA  958 (1177)
T ss_pred             hHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence            2222222333334445567778889999999999999999998886654

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=5.9e-34  Score=301.94  Aligned_cols=270  Identities=22%  Similarity=0.298  Sum_probs=198.3

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      +|.+.++||+|+||.||+|...  .++..+|+|.+....  ....+.+.+|+++++.++||||+++++++..++..++|+
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   79 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHK--ETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF   79 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEEC--CCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence            3566789999999999999886  567789999876432  234567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.++.... ..+++..+..++.||+.||+|||+.   +++|+||+|+||+++     +++.++|+|||++...
T Consensus        80 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~-----~~~~~~l~dfg~~~~~  150 (286)
T cd07846          80 EFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVS-----QSGVVKLCDFGFARTL  150 (286)
T ss_pred             ecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEC-----CCCcEEEEeeeeeeec
Confidence            999999998876443 4589999999999999999999998   999999999999998     7889999999998865


Q ss_pred             CCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh---hHHHHHHHhh
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV---LSDWVISCML  722 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~  722 (788)
                      ..... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+........   +.........
T Consensus       151 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (286)
T cd07846         151 AAPGE-VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQ  229 (286)
T ss_pred             cCCcc-ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhc
Confidence            44332 2223457889999998865 45788999999999999999999998654321110000000   0000000000


Q ss_pred             cccc-cccccCCCCCcc-----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          723 SRNL-QVLVSHDPEVLS-----DLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       723 ~~~~-~~l~~~~~~~~~-----~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .... .....+......     .......+.+++.+||+.+|++||+++++++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  283 (286)
T cd07846         230 KNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH  283 (286)
T ss_pred             cchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence            0000 000000000000     01234678899999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=2.9e-33  Score=296.52  Aligned_cols=245  Identities=25%  Similarity=0.381  Sum_probs=198.0

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCC
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      .+.||+|++|.||++...  ..+..+++|.+........+.+.+|+.++++++||||+++++++...+..++|+||++++
T Consensus        24 ~~~lg~g~~g~v~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~  101 (285)
T cd06648          24 FVKIGEGSTGIVCIATDK--STGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGG  101 (285)
T ss_pred             ceEeccCCCeEEEEEEEC--CCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCC
Confidence            468999999999999876  556789999887555555677899999999999999999999999999999999999999


Q ss_pred             CHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCc
Q 047157          573 TLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR  652 (788)
Q Consensus       573 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~  652 (788)
                      +|.+++..  ..+++..+..++.|++.||+|||++   +|+||||+|+||+++     .++.++|+|||.+.........
T Consensus       102 ~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~-----~~~~~~l~d~g~~~~~~~~~~~  171 (285)
T cd06648         102 ALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLT-----SDGRVKLSDFGFCAQVSKEVPR  171 (285)
T ss_pred             CHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEc-----CCCcEEEcccccchhhccCCcc
Confidence            99999865  4688899999999999999999999   999999999999998     7889999999988765433221


Q ss_pred             ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccC
Q 047157          653 TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSH  732 (788)
Q Consensus       653 ~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  732 (788)
                       .....++..|+|||.+.+..++.++||||||+++|||++|+.||........           . .......       
T Consensus       172 -~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~-----------~-~~~~~~~-------  231 (285)
T cd06648         172 -RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQA-----------M-KRIRDNL-------  231 (285)
T ss_pred             -cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHH-----------H-HHHHhcC-------
Confidence             2234578899999999888899999999999999999999999864321110           0 0011110       


Q ss_pred             CCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          733 DPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       733 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .+...........+.+++.+||+.+|++||++.++++
T Consensus       232 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         232 PPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             CCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence            0011111123457889999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-33  Score=299.07  Aligned_cols=271  Identities=20%  Similarity=0.233  Sum_probs=201.2

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .|.+.+.||+|++|.||+|...  .++..|++|.+....  ....+.+.+|++++++++|+||+++++++..++..++||
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~--~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~   79 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNK--ATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF   79 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeC--CCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence            3567789999999999999886  567799999886432  334578899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||++++.|..+.. ....+++..+..++.||+.||.|||+.   +++|+||+|+||+++     .++.+||+|||++...
T Consensus        80 e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~-----~~~~~kl~d~g~~~~~  150 (288)
T cd07833          80 EYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVS-----ESGVLKLCDFGFARAL  150 (288)
T ss_pred             ecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEC-----CCCCEEEEeeeccccc
Confidence            9999877766554 345689999999999999999999999   999999999999998     7889999999999876


Q ss_pred             CCCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh----HHHHHHHh
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL----SDWVISCM  721 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~----~~~~~~~~  721 (788)
                      ............++..|+|||++.+. .++.++||||||+++|+|++|+.||......+.........    ........
T Consensus       151 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (288)
T cd07833         151 RARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS  230 (288)
T ss_pred             CCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcc
Confidence            55443233345678899999999887 88999999999999999999999987542211100000000    00000000


Q ss_pred             hcccccccccCCCCCc------ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          722 LSRNLQVLVSHDPEVL------SDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~------~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ........--......      ........+.+++.+||+.+|++|||+++++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  285 (288)
T cd07833         231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH  285 (288)
T ss_pred             cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence            0000000000000000      011125678999999999999999999999753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=3.7e-33  Score=293.60  Aligned_cols=254  Identities=26%  Similarity=0.371  Sum_probs=196.8

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch----------HHHHHHHHHHHHHhcCCCccccceEeeEEecC
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI----------EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE  559 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~----------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  559 (788)
                      |...+.||+|+||.||+|...  .++..+|+|.++...          ....+.+.+|++++++++||||+++++++...
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~--~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   80 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNV--TTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE   80 (272)
T ss_pred             eeecceecccCceEEEEEeec--CCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC
Confidence            345678999999999999876  567789999875321          11235688899999999999999999999999


Q ss_pred             CeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEee
Q 047157          560 DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD  639 (788)
Q Consensus       560 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~D  639 (788)
                      +..++|+||+++++|.+++... ..+++..+..++.||+.||.|||++   +++|+||+|+||+++     .++.++|+|
T Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~-----~~~~~~l~d  151 (272)
T cd06629          81 EYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVD-----ADGICKISD  151 (272)
T ss_pred             CceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEc-----CCCeEEEee
Confidence            9999999999999999999665 5678899999999999999999998   999999999999998     788999999


Q ss_pred             cCCccccCCCCCc-ccccccCCccccCcccccCCC--CCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHH
Q 047157          640 FGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVP--VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDW  716 (788)
Q Consensus       640 fg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~--~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~  716 (788)
                      ||++......... ......++..|+|||.+....  ++.++|+||||+++||+++|..||......+.           
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-----------  220 (272)
T cd06629         152 FGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA-----------  220 (272)
T ss_pred             ccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHH-----------
Confidence            9999865432211 123346788999999987654  88999999999999999999999853321110           


Q ss_pred             HHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          717 VISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       717 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ..... .......+    ...........+.+++..||+.||++|||+++|+++
T Consensus       221 ~~~~~-~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         221 MFKLG-NKRSAPPI----PPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             HHHhh-ccccCCcC----CccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            00000 00000000    000111235678889999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=2.2e-33  Score=292.52  Aligned_cols=247  Identities=27%  Similarity=0.368  Sum_probs=197.7

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch-----HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-----EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      |...+.||+|++|.||+|...  .++..|++|.+....     .+..+.+.+|++++++++||||+++++++.+....++
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l   79 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNL--DDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYI   79 (258)
T ss_pred             ccccceeeecCCceEEEEEEc--CCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEE
Confidence            445688999999999999886  466789999886432     3356789999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |+||+++++|.+++.+. ..+++..+..++.||+.||+|||+.   +|+|+||+|+||+++     .++.+||+|||.+.
T Consensus        80 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~-----~~~~~kl~d~~~~~  150 (258)
T cd06632          80 FLELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVD-----TNGVVKLADFGMAK  150 (258)
T ss_pred             EEEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEC-----CCCCEEEccCccce
Confidence            99999999999999654 4578899999999999999999999   999999999999998     77899999999988


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCC-CCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ......  ......++..|+|||.+.... ++.++|+||||+++|+|++|+.||.......           ........
T Consensus       151 ~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~-----------~~~~~~~~  217 (258)
T cd06632         151 QVVEFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA-----------AVFKIGRS  217 (258)
T ss_pred             eccccc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH-----------HHHHHHhc
Confidence            654333  223356788999999987766 8999999999999999999999986542110           00000000


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .....         ......+.+.+++.+||+.+|++||+++++++
T Consensus       218 ~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         218 KELPP---------IPDHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             ccCCC---------cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence            00000         01122456778999999999999999999985

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=2.5e-33  Score=300.09  Aligned_cols=254  Identities=22%  Similarity=0.244  Sum_probs=198.7

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      |.+.+.||+|+||.||++...  ..+..|++|.+....   ....+.+.+|+++++.++||||+++++.+..++..++||
T Consensus         3 y~~~~~l~~g~~~~v~~~~~~--~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           3 FETIKLISNGAYGAVYLVRHK--ETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             ceEeeEeecCCCeeEEEEEEC--CCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            556789999999999999886  667789999886543   234467889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++... ..+++..+..++.|++.||.|||+.   +++||||||+||+++     .++.+||+|||+++..
T Consensus        81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~-----~~~~~~l~dfg~~~~~  151 (305)
T cd05609          81 EYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLIT-----SMGHIKLTDFGLSKIG  151 (305)
T ss_pred             ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEEC-----CCCCEEEeeCCCcccc
Confidence            999999999999655 4678889999999999999999998   999999999999998     7889999999998642


Q ss_pred             CCCC--------------CcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh
Q 047157          647 NKDQ--------------TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV  712 (788)
Q Consensus       647 ~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~  712 (788)
                      ....              ........++..|+|||.+....++.++||||||+++|||++|+.||......+.       
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~-------  224 (305)
T cd05609         152 LMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL-------  224 (305)
T ss_pred             CcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-------
Confidence            1100              0011124578889999999888999999999999999999999999965422110       


Q ss_pred             hHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          713 LSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       713 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                           ..........     .+.  ........+.+++.+||+.||++||++.++.+.|+.
T Consensus       225 -----~~~~~~~~~~-----~~~--~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         225 -----FGQVISDDIE-----WPE--GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             -----HHHHHhcccC-----CCC--ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence                 0111111000     000  011234567889999999999999997666666654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=3.8e-33  Score=292.73  Aligned_cols=252  Identities=25%  Similarity=0.363  Sum_probs=198.1

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch------HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI------EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      |...+.||+|++|.||++...  .++..+++|.+....      ....+.+.+|++++++++|+||+++++++.+.+..+
T Consensus         2 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   79 (268)
T cd06630           2 WLKGQQLGTGAFSSCYQARDV--KTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFN   79 (268)
T ss_pred             ccccceecCcCceEEEEEEEc--CCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEE
Confidence            345678999999999999875  567789999886432      234578899999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCC-CcEEEeecCC
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTN-YMAKISDFGI  642 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~-~~~kL~Dfg~  642 (788)
                      +|+||+++++|.+++.+. ..+++..+..++.||+.||.|||++   +++|+||+|+||+++     .+ ..+||+|||.
T Consensus        80 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~-----~~~~~~~l~dfg~  150 (268)
T cd06630          80 LFVEWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLID-----STGQRLRIADFGA  150 (268)
T ss_pred             EEEeccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEc-----CCCCEEEEccccc
Confidence            999999999999998654 4678899999999999999999999   999999999999997     44 4699999999


Q ss_pred             ccccCCCCCc---ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHH
Q 047157          643 SKLLNKDQTR---TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVIS  719 (788)
Q Consensus       643 a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  719 (788)
                      +.........   ......++..|+|||.+.+..++.++||||+|+++|+|++|+.||.........        .....
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~--------~~~~~  222 (268)
T cd06630         151 AARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL--------ALIFK  222 (268)
T ss_pred             ccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH--------HHHHH
Confidence            9876543211   122345788999999998888999999999999999999999998643221100        00000


Q ss_pred             HhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          720 CMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       720 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                       ....        ......+......+.+++.+||+.+|++||++.|++.
T Consensus       223 -~~~~--------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         223 -IASA--------TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             -Hhcc--------CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence             0000        0001112234567888999999999999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=4.9e-33  Score=298.16  Aligned_cols=246  Identities=25%  Similarity=0.321  Sum_probs=196.4

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccc---hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD---IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      |.+.+.||+|+||+||+|...  ..+..|++|.+...   .....+++.+|+++++.++||||+++++++.+.+..++|+
T Consensus        17 y~~~~~lg~g~~g~vy~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          17 FTDLREIGHGSFGAVYFARDV--RTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhheeecCCCCeEEEEEEEc--CCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            566688999999999999876  56678999988532   2344567899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||++ ++|.+++......+++..+..++.||+.||.|||+.   +|+|+||+|+||+++     .++.+||+|||++...
T Consensus        95 e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~-----~~~~~kL~dfg~~~~~  165 (307)
T cd06607          95 EYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLT-----EPGTVKLADFGSASLV  165 (307)
T ss_pred             HhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEC-----CCCCEEEeecCcceec
Confidence            9996 678777765556789999999999999999999998   999999999999998     7889999999998765


Q ss_pred             CCCCCcccccccCCccccCccccc---CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ...     ....++..|+|||.+.   ...++.++||||||+++|||++|+.||........           ... ...
T Consensus       166 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~-----------~~~-~~~  228 (307)
T cd06607         166 SPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-----------LYH-IAQ  228 (307)
T ss_pred             CCC-----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH-----------HHH-Hhc
Confidence            322     2245778999999874   45688999999999999999999999865421110           000 000


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                      .        .+.........+.+.+++.+||+.||++||++.+|+.+.
T Consensus       229 ~--------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  268 (307)
T cd06607         229 N--------DSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR  268 (307)
T ss_pred             C--------CCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence            0        011111223456789999999999999999999998753

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=3.5e-33  Score=297.18  Aligned_cols=263  Identities=24%  Similarity=0.329  Sum_probs=206.4

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      ..|.+.+.||+|+||.||++...  .++..+++|.+........+.+.+|+.++++++||||+++++.+...+..++|+|
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e   96 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDV--ATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME   96 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEc--CCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence            35566789999999999999875  4566899999865555556788999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++++|.+++.+  ..+++..+..++.|++.||.|||++   +++|+||||+||+++     .++.+||+|||++....
T Consensus        97 ~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~-----~~~~~kL~dfg~~~~~~  166 (293)
T cd06647          97 YLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLG-----MDGSVKLTDFGFCAQIT  166 (293)
T ss_pred             cCCCCcHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEc-----CCCCEEEccCcceeccc
Confidence            9999999999854  3578889999999999999999999   999999999999998     77899999999887654


Q ss_pred             CCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      .... ......+++.|+|||.+....++.++||||||+++|++++|+.||...........           ..      
T Consensus       167 ~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~-----------~~------  228 (293)
T cd06647         167 PEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-----------IA------  228 (293)
T ss_pred             cccc-ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee-----------hh------
Confidence            3322 22234678899999999888899999999999999999999999975432111000           00      


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--hhcCcC-CCCCCC
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM--LEGTLE-VGMPPL  782 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~~~~-~~~pp~  782 (788)
                        ....+...........+.+++.+||+.+|++||++.+++.+  ++...+ ...||+
T Consensus       229 --~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~~~~~~  284 (293)
T cd06647         229 --TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSSLTPL  284 (293)
T ss_pred             --cCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCcccccccch
Confidence              00011111112234567789999999999999999999976  333332 445554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=4.7e-33  Score=291.68  Aligned_cols=249  Identities=22%  Similarity=0.285  Sum_probs=193.7

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccc-----hHHHHHHHHHHHHHhcCCCccccceEeeEEecC--CeE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-----IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE--DKR  562 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~~  562 (788)
                      +.+.+.||+|+||.||+|...  .++..|++|.+...     .....+.+.+|++++++++||||+++++++.+.  ...
T Consensus         4 ~~~~~~l~~g~~g~v~~~~~~--~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           4 WRLGKLLGQGAFGRVYLCYDA--DTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             ceEeeEEecCCceEEEEEEEc--CCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            456789999999999999876  66779999987532     123456788999999999999999999988763  467


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||+++++|.+++... ..+++..+..++.|++.||.|||++   +|+|+||||+||+++     .++.++|+|||+
T Consensus        82 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~-----~~~~~~l~Dfg~  152 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRD-----SVGNVKLGDFGA  152 (265)
T ss_pred             EEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEec-----CCCCEEECcCcc
Confidence            8999999999999998654 4578888999999999999999999   999999999999998     788999999999


Q ss_pred             ccccCCCCC--cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          643 SKLLNKDQT--RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       643 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      +........  .......++..|+|||.+.+..++.++||||||+++|||++|+.||........           ....
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-----------~~~~  221 (265)
T cd06652         153 SKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA-----------IFKI  221 (265)
T ss_pred             ccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH-----------HHHH
Confidence            886543211  112234578899999999888899999999999999999999999964311110           0000


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ...         ......+......+.+++.+|+. +|++||+++||+++
T Consensus       222 ~~~---------~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~  261 (265)
T cd06652         222 ATQ---------PTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH  261 (265)
T ss_pred             hcC---------CCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence            000         00111122344567778888884 99999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=4.3e-33  Score=291.97  Aligned_cols=256  Identities=23%  Similarity=0.341  Sum_probs=201.9

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .|.+.+.||.|+||+||+|...  .++..+++|.+.... ....+.+.+|++.++.++|+||+++++.+...+..++|+|
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   79 (267)
T cd06610           2 DYELIEVIGVGATAVVYAAICL--PNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP   79 (267)
T ss_pred             cceeeeeecCCCCeEEEEEEEc--CCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence            3567789999999999999876  566789999886432 3356789999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhcc--CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          568 LMPNGTLSNFLFHE--GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       568 ~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ++++++|.+++...  ...+++..+..++.|++.||+|||+.   +|+|+||+|+||+++     +++.++|+|||++..
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~-----~~~~~~l~df~~~~~  151 (267)
T cd06610          80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLG-----EDGSVKIADFGVSAS  151 (267)
T ss_pred             ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEc-----CCCCEEEcccchHHH
Confidence            99999999999654  24678999999999999999999998   999999999999998     778899999999886


Q ss_pred             cCCCCCc---ccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          646 LNKDQTR---TDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       646 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      +......   ......++..|+|||.+... .++.++|+||||+++|||++|+.||........       ....    .
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-------~~~~----~  220 (267)
T cd06610         152 LADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV-------LMLT----L  220 (267)
T ss_pred             hccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh-------HHHH----h
Confidence            6543222   12334678899999998776 789999999999999999999999965422110       0000    0


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                       ..... ...   ...........+.+++..||+.||++||++++++++
T Consensus       221 -~~~~~-~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         221 -QNDPP-SLE---TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             -cCCCC-CcC---CccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence             00000 000   000011335678899999999999999999999863

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=7.5e-33  Score=298.10  Aligned_cols=254  Identities=25%  Similarity=0.297  Sum_probs=199.8

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc---hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD---IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .+...+.||+|+||.||++...  .++..+++|.+...   .....+.+.+|++++++++|||++++++++.+++..++|
T Consensus        26 ~f~~~~~lg~G~~~~v~~~~~~--~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv  103 (317)
T cd06635          26 LFTDLREIGHGSFGAVYFARDV--RTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLV  103 (317)
T ss_pred             hhhhhheeccCCCeEEEEEEEc--CCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEE
Confidence            3455678999999999999876  56678999988643   234456788999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||++ |+|.+.+......+++.++..++.||+.||.|||+.   +|+|+||+|+||+++     .++.+||+|||++..
T Consensus       104 ~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~-----~~~~~kl~dfg~~~~  174 (317)
T cd06635         104 MEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLT-----EPGQVKLADFGSASI  174 (317)
T ss_pred             EeCCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEEC-----CCCCEEEecCCCccc
Confidence            99996 588888766667789999999999999999999999   999999999999998     778999999998875


Q ss_pred             cCCCCCcccccccCCccccCccccc---CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ....     ....++..|+|||++.   ...++.++||||||+++|||++|+.||........       .     ....
T Consensus       175 ~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-------~-----~~~~  237 (317)
T cd06635         175 ASPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-------L-----YHIA  237 (317)
T ss_pred             cCCc-----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-------H-----HHHH
Confidence            4322     2345788999999873   45788999999999999999999999864321110       0     0000


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCCC
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVG  778 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~~  778 (788)
                      ....        ...........+.+++.+||+.+|++||++.+|++.+.-....+
T Consensus       238 ~~~~--------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~  285 (317)
T cd06635         238 QNES--------PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP  285 (317)
T ss_pred             hccC--------CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence            0000        00111223456788999999999999999999998765444333

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.8e-33  Score=320.12  Aligned_cols=200  Identities=23%  Similarity=0.344  Sum_probs=159.5

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeee------------------eeecccchHHHHHHHHHHHHHhcCCCccc
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIA------------------VKKLEKDIEKTNEEFMTELKIIGRTHHKN  548 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~va------------------vK~l~~~~~~~~~~~~~E~~~l~~l~hpn  548 (788)
                      ...|.+.+.||+|+||+||++..+.... ...+                  .|.+.. .......+.+|++++++++|||
T Consensus       147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~Hpn  224 (501)
T PHA03210        147 LAHFRVIDDLPAGAFGKIFICALRASTE-EAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLNHEN  224 (501)
T ss_pred             hhccEEEeEecCCCCcceEEEEEeccch-hhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCCCCC
Confidence            4568888999999999999987652211 1111                  111111 1234557889999999999999


Q ss_pred             cceEeeEEecCCeEEEEEecCCCCCHhHhhhccC----CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEe
Q 047157          549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEG----QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLL  624 (788)
Q Consensus       549 iv~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll  624 (788)
                      |+++++++.+.+..++|+|++. ++|.+++....    .......+..++.||+.||.|||++   +|+||||||+|||+
T Consensus       225 Iv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl  300 (501)
T PHA03210        225 ILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFL  300 (501)
T ss_pred             cCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence            9999999999999999999984 57777764331    2234566778999999999999999   99999999999999


Q ss_pred             ccCCCCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCC
Q 047157          625 DLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHI  697 (788)
Q Consensus       625 ~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~  697 (788)
                      +     .++.+||+|||++..+............|+..|+|||++.+..++.++|||||||++|||++|..++
T Consensus       301 ~-----~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p  368 (501)
T PHA03210        301 N-----CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCP  368 (501)
T ss_pred             C-----CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence            8     7889999999999876544333333467899999999999999999999999999999999988643

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-33  Score=290.62  Aligned_cols=264  Identities=23%  Similarity=0.324  Sum_probs=201.7

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcC--CCccccceEeeEEecCC----eE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR--THHKNLVRLLGFCSEED----KR  562 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~hpniv~~~~~~~~~~----~~  562 (788)
                      +..+.+.||+|.||.||+|.++    +..||||++...   .++.+.+|.++.+.  |+|+||+.+++.-..++    .+
T Consensus       212 qI~L~e~IGkGRyGEVwrG~wr----Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL  284 (513)
T KOG2052|consen  212 QIVLQEIIGKGRFGEVWRGRWR----GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL  284 (513)
T ss_pred             eeEEEEEecCccccceeecccc----CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence            3345688999999999999985    558999999754   34567788888874  69999999998754433    68


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhc-----cCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE-----CETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-----~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                      +||++|.+.|||.|||..  ..++....++++..+|.||+|||..     .+|.|.|||||.+|||+.     .++...|
T Consensus       285 wLvTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVK-----kn~~C~I  357 (513)
T KOG2052|consen  285 WLVTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK-----KNGTCCI  357 (513)
T ss_pred             EEeeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEc-----cCCcEEE
Confidence            999999999999999955  5788999999999999999999953     578999999999999998     8999999


Q ss_pred             eecCCccccCCCCCc---ccccccCCccccCcccccCC----CCC--ccCcchhhHHHHHHHHhC----------CCCCC
Q 047157          638 SDFGISKLLNKDQTR---TDTNMRGTMGYVAPEWLRNV----PVT--TKVDVFSFGVMLLEIICG----------RRHIE  698 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~----~~s--~k~DVwSlGvil~elltg----------~~p~~  698 (788)
                      +|+|+|.........   .....+||-+|||||++...    .+.  ..+||||||.++||+...          +.||.
T Consensus       358 ADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyy  437 (513)
T KOG2052|consen  358 ADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYY  437 (513)
T ss_pred             eeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcc
Confidence            999999877554322   23347899999999998543    122  359999999999999742          34554


Q ss_pred             ccccccccccchhhhHHHHHHHhhcccc-cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCC
Q 047157          699 LSRVEEESEEVDIVLSDWVISCMLSRNL-QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEV  777 (788)
Q Consensus       699 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~  777 (788)
                      ..-..+...           +.+..-.. +.+--.-+......+.+..+.++++.||..+|+.|-|+-.|.+.|.++.+.
T Consensus       438 d~Vp~DPs~-----------eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~  506 (513)
T KOG2052|consen  438 DVVPSDPSF-----------EEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNS  506 (513)
T ss_pred             cCCCCCCCH-----------HHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcC
Confidence            322221111           11111111 111112344556778899999999999999999999999999999877643

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=4.1e-33  Score=296.25  Aligned_cols=243  Identities=26%  Similarity=0.284  Sum_probs=198.3

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      |.+.+.||+|+||.||++...  ..+..+++|.+....   ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus         3 y~~~~~ig~g~~~~vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           3 FEFIKTLGTGSFGRVMLVRHK--GSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             eEEEEEeecCCCeEEEEEEEc--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            567789999999999999886  567789999886532   234567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++... ..++...+..++.||+.||.|||+.   +|+|+||+|+||+++     .++.+||+|||++...
T Consensus        81 e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~-----~~~~~kl~dfg~~~~~  151 (290)
T cd05580          81 EYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLD-----SDGYIKITDFGFAKRV  151 (290)
T ss_pred             ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEC-----CCCCEEEeeCCCcccc
Confidence            999999999998665 5688999999999999999999998   999999999999998     7789999999999876


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      ...    .....+++.|+|||.+.+...+.++||||||+++|+|++|+.||.......            ........  
T Consensus       152 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------------~~~~~~~~--  213 (290)
T cd05580         152 KGR----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ------------IYEKILEG--  213 (290)
T ss_pred             CCC----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH------------HHHHHhcC--
Confidence            443    223467899999999988889999999999999999999999996543111            00001111  


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIH  769 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~  769 (788)
                            .+...  ......+.+++.+||+.||.+||     +++|+++
T Consensus       214 ------~~~~~--~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         214 ------KVRFP--SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             ------CccCC--ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence                  11111  11245677899999999999999     7777764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-33  Score=294.19  Aligned_cols=251  Identities=26%  Similarity=0.362  Sum_probs=197.1

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEecCC------
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEED------  560 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~------  560 (788)
                      ..|.+.+.||+|++|.||+|..+  ..+..+++|.+..... ..+.+.+|+.+++++ +|+||+++++++....      
T Consensus         6 ~~y~~~~~l~~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (275)
T cd06608           6 GIFELVEVIGEGTYGKVYKARHK--KTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD   82 (275)
T ss_pred             hheeheeeecCCCCeEEEEEEEC--CCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence            34667789999999999999886  5567899998875533 346789999999999 7999999999996644      


Q ss_pred             eEEEEEecCCCCCHhHhhhcc---CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          561 KRLLVYELMPNGTLSNFLFHE---GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                      ..++||||+++++|.+++...   +..+++..+..++.|++.||.|||+.   +++|+||+|+||+++     .++.+||
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~-----~~~~~~l  154 (275)
T cd06608          83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLT-----KNAEVKL  154 (275)
T ss_pred             EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEc-----cCCeEEE
Confidence            489999999999999998643   36789999999999999999999999   999999999999998     7789999


Q ss_pred             eecCCccccCCCCCcccccccCCccccCcccccC-----CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh
Q 047157          638 SDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN-----VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV  712 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~  712 (788)
                      +|||++........ ......++..|+|||.+..     ..++.++||||||+++|+|++|+.||........       
T Consensus       155 ~d~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-------  226 (275)
T cd06608         155 VDFGVSAQLDSTLG-RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA-------  226 (275)
T ss_pred             CCCccceecccchh-hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH-------
Confidence            99999876543222 2223567889999998753     3567899999999999999999999964311110       


Q ss_pred             hHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          713 LSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       713 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ..     .....       ..+.........+.+.+++.+||+.||++|||++++++
T Consensus       227 ~~-----~~~~~-------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         227 LF-----KIPRN-------PPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             HH-----Hhhcc-------CCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            00     01111       01111222235567889999999999999999999986

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.1e-32  Score=292.58  Aligned_cols=257  Identities=27%  Similarity=0.367  Sum_probs=198.8

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecC--CeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE--DKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~~~lV~  566 (788)
                      +.+.+.||.|++|.||++...  ..+..+++|.+.... .....++.+|++++++++||||+++++++.+.  ...++||
T Consensus         3 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           3 IVELSRLGEGAGGSVTKCRLK--NTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             eEEEEEeccCCceEEEEEEEC--CCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            445688999999999999986  567789999887433 34567889999999999999999999988653  4789999


Q ss_pred             ecCCCCCHhHhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          567 ELMPNGTLSNFLFH---EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       567 e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      ||+++++|.+++..   ....++...+..++.||+.||+|||+.   +++|+||+|+||+++     .++.++|+|||++
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~-----~~~~~~l~dfg~~  152 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLT-----RKGQVKLCDFGVS  152 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEe-----cCCeEEEeecccc
Confidence            99999999988743   345678899999999999999999998   999999999999998     7778999999998


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ........   ....++..|+|||.+.+..++.++||||||+++|+|++|+.||........   .......+.    ..
T Consensus       153 ~~~~~~~~---~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~----~~  222 (287)
T cd06621         153 GELVNSLA---GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPL---GPIELLSYI----VN  222 (287)
T ss_pred             cccccccc---ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCC---ChHHHHHHH----hc
Confidence            76533221   134567889999999998999999999999999999999999975532100   011111111    11


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .....+. ..+  .......+.+.+++.+||+.+|++|||+.||++
T Consensus       223 ~~~~~~~-~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         223 MPNPELK-DEP--GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             CCchhhc-cCC--CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            1111110 011  111224567889999999999999999999987

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=4.2e-33  Score=294.88  Aligned_cols=250  Identities=25%  Similarity=0.348  Sum_probs=194.2

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEec------CC
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSE------ED  560 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~------~~  560 (788)
                      ..+.+.+.||+|+||.||+|...  ..+..+++|.+.... ....++..|+.++.++ +||||+++++++..      .+
T Consensus        16 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   92 (282)
T cd06636          16 GIFELVEVVGNGTYGQVYKGRHV--KTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDD   92 (282)
T ss_pred             hhhhhheeeccCCCeEEEEEEEc--CCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCC
Confidence            34556689999999999999886  566789999886543 3345788999999988 79999999999853      46


Q ss_pred             eEEEEEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEee
Q 047157          561 KRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD  639 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~D  639 (788)
                      ..+++|||+++++|.+++... ...+++..+..++.||+.||.|||+.   +|+|+||||+||+++     .++.++|+|
T Consensus        93 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~-----~~~~~~l~d  164 (282)
T cd06636          93 QLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLT-----ENAEVKLVD  164 (282)
T ss_pred             EEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEC-----CCCCEEEee
Confidence            789999999999999998653 34578888899999999999999999   999999999999998     778899999


Q ss_pred             cCCccccCCCCCcccccccCCccccCccccc-----CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhH
Q 047157          640 FGISKLLNKDQTRTDTNMRGTMGYVAPEWLR-----NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS  714 (788)
Q Consensus       640 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~  714 (788)
                      ||++........ ......++..|+|||.+.     ...++.++||||||+++|||++|+.||..........       
T Consensus       165 fg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~-------  236 (282)
T cd06636         165 FGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF-------  236 (282)
T ss_pred             Ccchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh-------
Confidence            999876532221 122356888999999875     3567889999999999999999999996432111000       


Q ss_pred             HHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          715 DWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       715 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                          . ....        .............+.+++.+||+.||.+||++.|+++
T Consensus       237 ----~-~~~~--------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         237 ----L-IPRN--------PPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             ----h-HhhC--------CCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence                0 0000        0001111123467889999999999999999999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.2e-33  Score=303.04  Aligned_cols=248  Identities=23%  Similarity=0.310  Sum_probs=204.8

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ..|.+.+.||+|.|+.|.+|.+.  .++..||||.+++..  ......+.+|+++|+.++|||||+++.+.+....+|+|
T Consensus        56 g~y~i~~tig~g~f~~V~La~~~--~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV  133 (596)
T KOG0586|consen   56 GLYVIIKTIGKGNFAKVKLARHI--LTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV  133 (596)
T ss_pred             cceeeeeeeccceeEEEEeeEec--CCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence            34566789999999999999998  667799999997654  23334588999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+.+|.+.+++.+.++..+ .....++.|+.+|++|||++   .|+|||||++||||+     .+.++||+|||++..
T Consensus       134 ~eya~~ge~~~yl~~~gr~~e-~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~-----~~mnikIaDfgfS~~  204 (596)
T KOG0586|consen  134 MEYASGGELFDYLVKHGRMKE-KEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLD-----ENMNIKIADFGFSTF  204 (596)
T ss_pred             EEeccCchhHHHHHhcccchh-hhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccc-----cccceeeecccccee
Confidence            999999999999987755555 88889999999999999999   999999999999999     888999999999998


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCC-ccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVT-TKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      +....  .....+|++.|.|||++.+.++. +++|+||+|++||.|+.|..||++....+.....               
T Consensus       205 ~~~~~--~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rv---------------  267 (596)
T KOG0586|consen  205 FDYGL--MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRV---------------  267 (596)
T ss_pred             ecccc--cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchh---------------
Confidence            76433  33457899999999999988775 7999999999999999999999976544332211               


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                       +...    ..  .+.-...++.++++++|-.+|.+|++++++++.
T Consensus       268 -l~gk----~r--Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~~  306 (596)
T KOG0586|consen  268 -LRGK----YR--IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD  306 (596)
T ss_pred             -eeee----ec--ccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence             0000    00  111123456678889999999999999999863

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=4.7e-33  Score=295.89  Aligned_cols=250  Identities=27%  Similarity=0.343  Sum_probs=193.4

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEecC-----CeEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEE-----DKRL  563 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~-----~~~~  563 (788)
                      |.+.+.||+|+||.||++...  .++..+++|.+.... .....+.+|+.++.++ +|||++++++++...     +..+
T Consensus        24 y~~~~~l~~g~~~~vy~~~~~--~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~  100 (291)
T cd06639          24 WEIIETIGKGTYGKVYKVTNK--KDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLW  100 (291)
T ss_pred             eEEEEEeecCCCeEEEEEEEC--CCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeE
Confidence            455689999999999999876  567789999886532 2345678899999988 899999999998653     3589


Q ss_pred             EEEecCCCCCHhHhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          564 LVYELMPNGTLSNFLFH---EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      +|+||+++++|.+++..   ....+++..+..++.|++.||.|||+.   +|+|+||||+||+++     .++.+||+||
T Consensus       101 lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~-----~~~~~kl~df  172 (291)
T cd06639         101 LVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLT-----TEGGVKLVDF  172 (291)
T ss_pred             EEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEc-----CCCCEEEeec
Confidence            99999999999998853   345688999999999999999999998   999999999999998     7788999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccCC-----CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV-----PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSD  715 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~  715 (788)
                      |++......... .....++..|+|||.+...     .++.++||||||+++|||++|+.||........       +..
T Consensus       173 g~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~-------~~~  244 (291)
T cd06639         173 GVSAQLTSTRLR-RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT-------LFK  244 (291)
T ss_pred             ccchhccccccc-ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH-------HHH
Confidence            998865432211 1234578899999987543     368899999999999999999999864321110       000


Q ss_pred             HHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          716 WVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       716 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                           ......       +...........+.+++.+||+.+|++||++.|++++
T Consensus       245 -----~~~~~~-------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         245 -----IPRNPP-------PTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             -----HhcCCC-------CCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence                 001100       0111112234568889999999999999999999864

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=3.1e-33  Score=297.29  Aligned_cols=269  Identities=22%  Similarity=0.302  Sum_probs=194.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchH-HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE-KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .|.+.+.||+|++|.||+|..+  .++..|++|.+..... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus         6 ~y~~~~~lg~g~~~~vy~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (291)
T cd07844           6 TYKKLDKLGEGSYATVYKGRSK--LTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE   83 (291)
T ss_pred             ceeEEEEEeecCCeEEEEEEEc--CCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence            4566789999999999999876  5667899999864332 223456789999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++ +|.+++......+++..+..++.|++.||.|||+.   +|+|+||||+||+++     .++.+||+|||++....
T Consensus        84 ~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~-----~~~~~kl~dfg~~~~~~  154 (291)
T cd07844          84 YLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLIS-----ERGELKLADFGLARAKS  154 (291)
T ss_pred             cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEc-----CCCCEEECccccccccC
Confidence            9974 99999877666789999999999999999999999   999999999999998     77899999999987543


Q ss_pred             CCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCcccccccc-ccchhh---hHHHHHHHhh
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEES-EEVDIV---LSDWVISCML  722 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~-~~~~~~---~~~~~~~~~~  722 (788)
                      .... ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||......... ......   .....+....
T Consensus       155 ~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (291)
T cd07844         155 VPSK-TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVS  233 (291)
T ss_pred             CCCc-cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhh
Confidence            2111 1122346788999998865 45889999999999999999999999654311000 000000   0000000000


Q ss_pred             c-cccccc----ccCCC--CCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          723 S-RNLQVL----VSHDP--EVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       723 ~-~~~~~l----~~~~~--~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      . ......    ....+  ...........+.+++.+||+.+|++|||+.|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         234 SNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             hccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence            0 000000    00000  00001111256778999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.7e-33  Score=293.01  Aligned_cols=248  Identities=22%  Similarity=0.320  Sum_probs=197.0

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCC---ccccceEeeEEecCCeEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTH---HKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~lV  565 (788)
                      |.+.+.||+|+||.||+|...  ..+..+++|.+.... ....+++.+|++++++++   |||++++++++..+...++|
T Consensus         3 y~~~~~l~~g~~g~v~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv   80 (277)
T cd06917           3 YQRLELIGRGAYGAVYRGKHV--PTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII   80 (277)
T ss_pred             hhhhhheeccCCceEEEEEEc--CCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence            455678999999999999986  566799999886432 344567889999999886   99999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++..  ..+++..++.++.|++.||.|||+.   +|+|+||+|+||+++     .++.++|+|||.+..
T Consensus        81 ~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~-----~~~~~~l~dfg~~~~  150 (277)
T cd06917          81 MEYAEGGSVRTLMKA--GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVT-----NTGNVKLCDFGVAAL  150 (277)
T ss_pred             EecCCCCcHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEc-----CCCCEEEccCCceee
Confidence            999999999999854  3688999999999999999999999   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ...... ......|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||.........            ......
T Consensus       151 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~------------~~~~~~  217 (277)
T cd06917         151 LNQNSS-KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM------------MLIPKS  217 (277)
T ss_pred             cCCCcc-ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh------------hccccC
Confidence            654332 2233468889999998865 45789999999999999999999999654221100            000000


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                              .+...........+.+++.+||+.||++||++.|++++
T Consensus       218 --------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~  255 (277)
T cd06917         218 --------KPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKS  255 (277)
T ss_pred             --------CCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence                    00001111134578889999999999999999999863

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=4.7e-33  Score=291.11  Aligned_cols=252  Identities=28%  Similarity=0.377  Sum_probs=203.8

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchH-HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE-KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      +.+.+.||+|++|.||++...  ..+..+++|++..... ...+.+.+|++.+.+++|+||+++++++...+..++|+||
T Consensus         3 ~~~~~~i~~g~~~~v~~~~~~--~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           3 LERVKVLGQGSSGVVYKVRHK--PTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             ceeeeeeeecCCeEEEEEEEc--CCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            456789999999999999887  5677999999876543 4567899999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhh-ccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE-ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      +++++|.+++... ..+++..++.++.|+++||.|||+ .   +++|+||+|+||+++     .++.++|+|||.+....
T Consensus        81 ~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~-----~~~~~~l~df~~~~~~~  151 (264)
T cd06623          81 MDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLIN-----SKGEVKIADFGISKVLE  151 (264)
T ss_pred             cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEEC-----CCCCEEEccCccceecc
Confidence            9999999999655 668999999999999999999999 8   999999999999998     78899999999998765


Q ss_pred             CCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      ...... ....++..|+|||.+.+..++.++||||||+++|+|++|+.||.......     ......    ....... 
T Consensus       152 ~~~~~~-~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-----~~~~~~----~~~~~~~-  220 (264)
T cd06623         152 NTLDQC-NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS-----FFELMQ----AICDGPP-  220 (264)
T ss_pred             cCCCcc-cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC-----HHHHHH----HHhcCCC-
Confidence            433221 23457889999999998899999999999999999999999996543200     000111    1111110 


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                             .........+.+.+++.+||+.+|++||+++|++++
T Consensus       221 -------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         221 -------PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             -------CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence                   001111145678889999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=4.9e-33  Score=296.09  Aligned_cols=270  Identities=21%  Similarity=0.234  Sum_probs=197.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecC--CeEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE--DKRLL  564 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~~~l  564 (788)
                      .|.+.+.||+|+||.||+|...  .++..+++|.++...  ......+.+|+.++.+++||||+++++++...  +..++
T Consensus         6 ~y~~~~~lg~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l   83 (293)
T cd07843           6 EYEKLNRIEEGTYGVVYRARDK--KTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM   83 (293)
T ss_pred             hhhhhhhhcCCCCeEEEEEEEC--CCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence            4566789999999999999886  567789999886433  22334677899999999999999999998877  89999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |+||++ ++|.+++......+++..+..++.||+.||.|||++   +++|+||||+||+++     .++.+||+|||++.
T Consensus        84 v~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~-----~~~~~~l~d~g~~~  154 (293)
T cd07843          84 VMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLN-----NRGILKICDFGLAR  154 (293)
T ss_pred             EehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEEC-----CCCcEEEeecCcee
Confidence            999997 599998876666789999999999999999999999   999999999999998     77899999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh---HHHHHHH
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL---SDWVISC  720 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~~~  720 (788)
                      ....... ......++..|+|||.+.+. .++.++||||||+++|||++|+.||................   ....+..
T Consensus       155 ~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (293)
T cd07843         155 EYGSPLK-PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPG  233 (293)
T ss_pred             eccCCcc-ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHH
Confidence            7654321 11224567889999988654 46899999999999999999999997553322111100000   0000000


Q ss_pred             hhc------ccccccccCCCCC-cccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          721 MLS------RNLQVLVSHDPEV-LSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       721 ~~~------~~~~~l~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ...      ............. .......+.+.+++..||+.||++|||++|+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         234 FSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             hhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence            000      0000000000000 0000124567889999999999999999999863

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=9.5e-33  Score=291.39  Aligned_cols=249  Identities=24%  Similarity=0.362  Sum_probs=199.1

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ..+.+.+.||+|+||.||+|...  ..+..+|+|.+.... ....+.+.+|+.++.+++||||+++++++.+++..++||
T Consensus         4 ~~~~~~~~ig~G~~~~vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   81 (277)
T cd06641           4 ELFTKLEKIGKGSFGEVFKGIDN--RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM   81 (277)
T ss_pred             HhhhhheeEeecCCeEEEEEEEC--CCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEE
Confidence            34556788999999999999875  566799999876432 344567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++..  ..+++..+..++.|++.||.|||+.   +++|+||+|+||+++     .++.++|+|||++..+
T Consensus        82 e~~~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~-----~~~~~~l~dfg~~~~~  151 (277)
T cd06641          82 EYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLS-----EHGEVKLADFGVAGQL  151 (277)
T ss_pred             EeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEEC-----CCCCEEEeecccceec
Confidence            99999999999853  4678999999999999999999998   999999999999998     7788999999998765


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      ..... ......++..|+|||.+.+..++.++||||||+++|+|++|..||.......        .   . ........
T Consensus       152 ~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--------~---~-~~~~~~~~  218 (277)
T cd06641         152 TDTQI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK--------V---L-FLIPKNNP  218 (277)
T ss_pred             ccchh-hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH--------H---H-HHHhcCCC
Confidence            43221 1223457889999999988889999999999999999999999986432111        0   0 00111100


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                             +.  ........+.+++.+||+.+|++||++++++++
T Consensus       219 -------~~--~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         219 -------PT--LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             -------CC--CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence                   00  011234567789999999999999999999984

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=8.7e-33  Score=293.11  Aligned_cols=250  Identities=27%  Similarity=0.393  Sum_probs=201.2

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      +.+.+.||+|++|.||+|...  ..+..+++|.+..... ..+.+.+|++.+++++|+||+++++.+...+..++|+||+
T Consensus        21 ~~~~~~l~~g~~~~v~~~~~~--~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   97 (286)
T cd06614          21 YKNLEKIGEGASGEVYKATDR--ATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYM   97 (286)
T ss_pred             chHhHhccCCCCeEEEEEEEc--cCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEecc
Confidence            445578999999999999886  4567899999876544 5677889999999999999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|.+++......+++..+..++.|++.||.|||+.   +|+|+||+|+||+++     .++.++|+|||.+......
T Consensus        98 ~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~-----~~~~~~l~d~~~~~~~~~~  169 (286)
T cd06614          98 DGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLS-----KDGSVKLADFGFAAQLTKE  169 (286)
T ss_pred             CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEc-----CCCCEEECccchhhhhccc
Confidence            99999999977655789999999999999999999998   999999999999998     7789999999988765432


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      .. ......++..|+|||.+.+..++.++||||||+++|+|++|+.||........       ..     .......   
T Consensus       170 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~-------~~-----~~~~~~~---  233 (286)
T cd06614         170 KS-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA-------LF-----LITTKGI---  233 (286)
T ss_pred             hh-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH-------HH-----HHHhcCC---
Confidence            21 11234577899999999888899999999999999999999999864322110       00     0000000   


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                          +...........+.+++.+||+.+|.+||++.+|+++
T Consensus       234 ----~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  270 (286)
T cd06614         234 ----PPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH  270 (286)
T ss_pred             ----CCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence                1111111234678889999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=7.7e-33  Score=292.68  Aligned_cols=266  Identities=19%  Similarity=0.188  Sum_probs=194.3

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCC-ccccceEeeEEecC--CeEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEE--DKRLLV  565 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~--~~~~lV  565 (788)
                      |.+.+.||+|+||.||+|...  .++..+|+|.+.... ........+|+.++.++. ||||+++++++.+.  +..++|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~--~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv   78 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSR--KTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV   78 (282)
T ss_pred             CceEeeccccccceEEEEEEc--CCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence            346688999999999999876  566789999886542 222334557888998885 99999999999887  889999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      +||++ ++|.+++......+++..+..++.||+.||.|||+.   +++||||+|+||+++     . +.+||+|||++..
T Consensus        79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~-----~-~~~kl~dfg~~~~  148 (282)
T cd07831          79 FELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIK-----D-DILKLADFGSCRG  148 (282)
T ss_pred             EecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEc-----C-CCeEEEecccccc
Confidence            99996 588888876656789999999999999999999999   999999999999998     5 8999999999987


Q ss_pred             cCCCCCcccccccCCccccCccccc-CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchh----hhHHHHHHH
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLR-NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI----VLSDWVISC  720 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~~  720 (788)
                      .......  ....++..|+|||.+. +..++.++|||||||++|||++|+.||...+..+.......    ....+ ...
T Consensus       149 ~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~  225 (282)
T cd07831         149 IYSKPPY--TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEV-LKK  225 (282)
T ss_pred             cccCCCc--CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHH-HHh
Confidence            6433221  2245788999999764 45678999999999999999999999976432211000000    00000 000


Q ss_pred             hhcccccccccCCCCC----cccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEV----LSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~----~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ...........+....    .........+.+++.+||+.+|++||+++++++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  279 (282)
T cd07831         226 FRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH  279 (282)
T ss_pred             hcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence            0000000000000000    0011235788999999999999999999999864

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=5.1e-33  Score=290.14  Aligned_cols=247  Identities=28%  Similarity=0.309  Sum_probs=199.7

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      |.+.+.||+|+||.||++...  .++..+++|.+....   ....+.+.+|++++++++||||+++++++.+++..++|+
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   79 (258)
T cd05578           2 FELLRVIGKGAFGKVCIVQKR--DTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVV   79 (258)
T ss_pred             ceEEEEeccCCCceEEEEEEc--cCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEE
Confidence            566789999999999999876  567789999987543   245678999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++... ..+++..+..++.||++||.|||+.   +++|+||+|+||+++     .++.++|+|||.+...
T Consensus        80 e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~-----~~~~~~l~d~~~~~~~  150 (258)
T cd05578          80 DLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLD-----EQGHVHITDFNIATKV  150 (258)
T ss_pred             eCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEc-----CCCCEEEeeccccccc
Confidence            999999999999655 5788999999999999999999998   999999999999998     7889999999998876


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      ....  ......++..|+|||.+.+..++.++|+||||+++|+|++|+.||.......         ..........   
T Consensus       151 ~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---------~~~~~~~~~~---  216 (258)
T cd05578         151 TPDT--LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI---------RDQIRAKQET---  216 (258)
T ss_pred             CCCc--cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH---------HHHHHHHhcc---
Confidence            4432  1223567889999999988889999999999999999999999997553210         0111111110   


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCH--HHHH
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSM--KKVI  768 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~--~evl  768 (788)
                             ............+.+++.+||+.||.+||++  +|++
T Consensus       217 -------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         217 -------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             -------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence                   0001111234678899999999999999999  6554

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=7.7e-33  Score=293.28  Aligned_cols=269  Identities=23%  Similarity=0.253  Sum_probs=199.0

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecC--CeEEEEE
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE--DKRLLVY  566 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~~~lV~  566 (788)
                      .+.+.||+|++|.||+|...  ..+..+++|.+....  ....+.+.+|++++++++|||++++++++...  +..++|+
T Consensus         2 ~~~~~l~~g~~~~vy~~~~~--~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   79 (287)
T cd07840           2 EKIAQIGEGTYGQVYKARNK--KTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF   79 (287)
T ss_pred             eeeEEeccCCCeEEEEEEEC--CCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence            45688999999999999886  566789999997653  33456788999999999999999999999888  8999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++ +|.+++......+++..++.++.||+.||+|||+.   +++|+||+|+||+++     +++.+||+|||++...
T Consensus        80 e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~-----~~~~~~l~d~g~~~~~  150 (287)
T cd07840          80 EYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILIN-----NDGVLKLADFGLARPY  150 (287)
T ss_pred             ccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEc-----CCCCEEEccccceeec
Confidence            99974 89998876656789999999999999999999998   999999999999998     7889999999999876


Q ss_pred             CCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhH---HHHHHHhh
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS---DWVISCML  722 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~  722 (788)
                      ............++..|+|||.+.+ ..++.++||||||+++|||++|+.||.................   ...+....
T Consensus       151 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (287)
T cd07840         151 TKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVS  230 (287)
T ss_pred             cCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccc
Confidence            5543222333456788999998764 4678999999999999999999999975432211110000000   00000000


Q ss_pred             cccccccccCCCCCcc----cH-H-HHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          723 SRNLQVLVSHDPEVLS----DL-E-RFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~----~~-~-~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .-..............    .. . ....+.+++.+||+.+|.+||+++++++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  284 (287)
T cd07840         231 KLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH  284 (287)
T ss_pred             cchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            0000000000000000    00 1 25678899999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=9.5e-33  Score=293.56  Aligned_cols=269  Identities=21%  Similarity=0.239  Sum_probs=193.9

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .|.+.+.||+|+||.||+|...  ..+..+++|.+.... ......+.+|++++++++|+||+++++++..++..++|+|
T Consensus         6 ~y~~~~~ig~g~~~~v~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   83 (291)
T cd07870           6 SYLNLEKLGEGSYATVYKGISR--INGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE   83 (291)
T ss_pred             eeEEEEEEEecCCEEEEEEEEc--CCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence            3566789999999999999886  556689999986543 2233467789999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+. ++|.+++......+.+..+..++.||+.||.|||+.   +|+|+||||+||+++     .++.+||+|||++....
T Consensus        84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~-----~~~~~~l~Dfg~~~~~~  154 (291)
T cd07870          84 YMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLIS-----YLGELKLADFGLARAKS  154 (291)
T ss_pred             ccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEc-----CCCcEEEeccccccccC
Confidence            995 678777765556678888889999999999999999   999999999999998     77899999999987643


Q ss_pred             CCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh-----hHH-HHHHH
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV-----LSD-WVISC  720 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~-----~~~-~~~~~  720 (788)
                      .... ......++..|+|||.+.+. .++.++||||||+++|||++|+.||...............     ... +....
T Consensus       155 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (291)
T cd07870         155 IPSQ-TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVS  233 (291)
T ss_pred             CCCC-CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhh
Confidence            3221 11234568899999998754 5788999999999999999999999754321100000000     000 00000


Q ss_pred             hhcccccccccCCCCC-----cccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEV-----LSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~-----~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ................     .........+.+++.+|++.||++|||++|++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence            0000000000000000     001112356778899999999999999999875

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=2e-32  Score=288.91  Aligned_cols=244  Identities=29%  Similarity=0.342  Sum_probs=192.1

Q ss_pred             ccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCC
Q 047157          496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       496 lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      ||+|+||+||++...  .++..+++|.+....   ....+.+.+|++++++++||||+++++.+...+..++||||++++
T Consensus         1 lg~g~~g~vy~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (277)
T cd05577           1 LGKGGFGEVCACQVK--ATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGG   78 (277)
T ss_pred             CCCCCceeEEEEEEc--CCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCC
Confidence            689999999999876  567789999886432   223456678999999999999999999999999999999999999


Q ss_pred             CHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCC
Q 047157          573 TLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT  651 (788)
Q Consensus       573 sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~  651 (788)
                      +|.+++.... ..+++..+..++.|++.||.|||+.   +++|+||+|+||+++     .++.+||+|||.+....... 
T Consensus        79 ~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~-----~~~~~~l~dfg~~~~~~~~~-  149 (277)
T cd05577          79 DLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLD-----DHGNVRISDLGLAVELKGGK-  149 (277)
T ss_pred             cHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEC-----CCCCEEEccCcchhhhccCC-
Confidence            9999997654 3688999999999999999999999   999999999999998     77899999999987654321 


Q ss_pred             cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccccc
Q 047157          652 RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVS  731 (788)
Q Consensus       652 ~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  731 (788)
                       ......++..|+|||.+.+..++.++||||||+++|+|++|+.||..........    .    .    ......    
T Consensus       150 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~----~----~~~~~~----  212 (277)
T cd05577         150 -KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKE----E----L----KRRTLE----  212 (277)
T ss_pred             -ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHH----H----H----Hhcccc----
Confidence             1123457789999999988889999999999999999999999996543211000    0    0    000000    


Q ss_pred             CCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 047157          732 HDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIH  769 (788)
Q Consensus       732 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~  769 (788)
                      ....  ........+.+++.+||+.||++||     ++.++++
T Consensus       213 ~~~~--~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         213 MAVE--YPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             cccc--CCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence            0000  0111245678899999999999999     7777765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=6.2e-33  Score=290.15  Aligned_cols=246  Identities=26%  Similarity=0.348  Sum_probs=196.9

Q ss_pred             ccccccceEEEEEEeccCcceeeeeeecccchH---HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCC
Q 047157          496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       496 lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      ||+|+||.||++...  .++..+++|.+.....   ...+.+.+|++++++++||||+++++.+..+...++|+||++++
T Consensus         1 lg~g~~~~vy~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (265)
T cd05579           1 ISKGAYGRVFLAKKK--STGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGG   78 (265)
T ss_pred             CCCCCceEEEEEEEC--CCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCC
Confidence            689999999999886  5577999999865432   45668899999999999999999999999999999999999999


Q ss_pred             CHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCC-
Q 047157          573 TLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT-  651 (788)
Q Consensus       573 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~-  651 (788)
                      +|.+++.+.+ .+++..+..++.||++||+|||+.   +++|+||+|+||+++     .++.++|+|||++........ 
T Consensus        79 ~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~-----~~~~~~l~dfg~~~~~~~~~~~  149 (265)
T cd05579          79 DLASLLENVG-SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILID-----SNGHLKLTDFGLSKVGLVRRQI  149 (265)
T ss_pred             cHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEc-----CCCCEEEEecccchhcccCccc
Confidence            9999996653 689999999999999999999999   999999999999998     788999999999876533211 


Q ss_pred             ------cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          652 ------RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       652 ------~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                            .......++..|+|||.......+.++||||||+++|||++|+.||......+.           . .......
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~-----------~-~~~~~~~  217 (265)
T cd05579         150 NLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEI-----------F-QNILNGK  217 (265)
T ss_pred             ccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-----------H-HHHhcCC
Confidence                  122334578899999999888899999999999999999999999965432110           0 1111111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                              ............+.+++.+||+.+|++|||+.++.+.|+
T Consensus       218 --------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         218 --------IEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             --------cCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence                    011111112567789999999999999999977766664

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=1.2e-32  Score=292.86  Aligned_cols=244  Identities=24%  Similarity=0.354  Sum_probs=196.3

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGT  573 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~gs  573 (788)
                      .+||+|+||.||++...  .++..|++|++........+.+.+|+.++++++|+||+++++.+...+..++||||+++++
T Consensus        26 ~~lg~g~~g~v~~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~  103 (292)
T cd06657          26 IKIGEGSTGIVCIATVK--SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA  103 (292)
T ss_pred             HHcCCCCCeEEEEEEEc--CCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCc
Confidence            67999999999999886  6677999999865555566789999999999999999999999999999999999999999


Q ss_pred             HhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCcc
Q 047157          574 LSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT  653 (788)
Q Consensus       574 L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~  653 (788)
                      |.+++..  ..+++..+..++.|++.||+|||+.   +++|+||+|+||+++     .++.++|+|||++........ .
T Consensus       104 L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~-----~~~~~~l~dfg~~~~~~~~~~-~  172 (292)
T cd06657         104 LTDIVTH--TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLT-----HDGRVKLSDFGFCAQVSKEVP-R  172 (292)
T ss_pred             HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEC-----CCCCEEEcccccceecccccc-c
Confidence            9998743  3578899999999999999999999   999999999999998     778899999999876543221 1


Q ss_pred             cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCC
Q 047157          654 DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHD  733 (788)
Q Consensus       654 ~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  733 (788)
                      .....++..|+|||.+.+..++.++||||+|+++|+|++|..||........        .....     ......+   
T Consensus       173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~--------~~~~~-----~~~~~~~---  236 (292)
T cd06657         173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--------MKMIR-----DNLPPKL---  236 (292)
T ss_pred             ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--------HHHHH-----hhCCccc---
Confidence            2234578899999999888899999999999999999999999875322110        00000     0000000   


Q ss_pred             CCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          734 PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       734 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                         .........+.+++.+||+.||.+||++.++++
T Consensus       237 ---~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         237 ---KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             ---CCcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence               001122345678899999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=1e-32  Score=301.72  Aligned_cols=267  Identities=22%  Similarity=0.241  Sum_probs=195.9

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecC------
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE------  559 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------  559 (788)
                      ..|...+.||+|+||.||++...  .++..||+|.+...  .....+.+.+|+.++++++||||+++++++...      
T Consensus        16 ~~y~~~~~lg~g~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          16 KRYQNLKPIGSGAQGIVCAAYDT--VTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             cceEEEEEeccCCCEEEEEEEEC--CCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            45667789999999999999886  56779999998643  233445778899999999999999999988643      


Q ss_pred             CeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEee
Q 047157          560 DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD  639 (788)
Q Consensus       560 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~D  639 (788)
                      ...++||||+. ++|.+.+...   ++...+..++.|++.||+|||++   +|+||||||+||+++     .++.+||+|
T Consensus        94 ~~~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~-----~~~~~kL~D  161 (353)
T cd07850          94 QDVYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVK-----SDCTLKILD  161 (353)
T ss_pred             CcEEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEC-----CCCCEEEcc
Confidence            35799999995 5888877432   78889999999999999999999   999999999999998     788999999


Q ss_pred             cCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccch-------hh
Q 047157          640 FGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVD-------IV  712 (788)
Q Consensus       640 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~-------~~  712 (788)
                      ||++........  .....++..|+|||.+.+..++.++||||||+++|+|++|+.||...+.........       ..
T Consensus       162 fg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  239 (353)
T cd07850         162 FGLARTAGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDE  239 (353)
T ss_pred             CccceeCCCCCC--CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence            999986543222  223457889999999999999999999999999999999999997543221110000       00


Q ss_pred             hHH----HHHHHhhccc------ccccccCCC----CCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          713 LSD----WVISCMLSRN------LQVLVSHDP----EVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       713 ~~~----~~~~~~~~~~------~~~l~~~~~----~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      +..    ..........      +..+.....    ...........+.+++.+||+.||++|||+.|++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         240 FMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             HHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            000    0000000000      000000000    000011335667899999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-32  Score=271.03  Aligned_cols=284  Identities=22%  Similarity=0.285  Sum_probs=213.6

Q ss_pred             CHHHHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEecC
Q 047157          481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEE  559 (788)
Q Consensus       481 ~~~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~  559 (788)
                      +++++-+.|   .+.||+|+|+.|-.++..  .++.++|||++++.....+.++.+|++++... .|+||+++++||+++
T Consensus        74 ~F~d~YkLt---~e~LGeGAyasVqtcv~i--~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd  148 (463)
T KOG0607|consen   74 KFEDMYKLT---SELLGEGAYASVQTCVSI--QTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD  148 (463)
T ss_pred             hHHHHHHhH---HHHhcCccceeeeeeeee--ccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence            456665544   478999999999988776  67889999999998888889999999999988 599999999999999


Q ss_pred             CeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEee
Q 047157          560 DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD  639 (788)
Q Consensus       560 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~D  639 (788)
                      ...|||||-|.||+|..++.++ +.+++.++.++.++|+.||.|||.+   +|.||||||+|||-....  .-.-+||+|
T Consensus       149 ~~FYLVfEKm~GGplLshI~~~-~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn--~vsPvKiCD  222 (463)
T KOG0607|consen  149 TRFYLVFEKMRGGPLLSHIQKR-KHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPN--KVSPVKICD  222 (463)
T ss_pred             ceEEEEEecccCchHHHHHHHh-hhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCC--CcCceeeec
Confidence            9999999999999999999655 6789999999999999999999999   999999999999986433  456799999


Q ss_pred             cCCccccCC--CC----CcccccccCCccccCccccc-----CCCCCccCcchhhHHHHHHHHhCCCCCCcccccccc--
Q 047157          640 FGISKLLNK--DQ----TRTDTNMRGTMGYVAPEWLR-----NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEES--  706 (788)
Q Consensus       640 fg~a~~~~~--~~----~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~--  706 (788)
                      |.+..-+..  +.    .......+|+..|||||+..     ...|+.+.|.||||||||-|++|..||.+....+-.  
T Consensus       223 fDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWd  302 (463)
T KOG0607|consen  223 FDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWD  302 (463)
T ss_pred             cccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCcc
Confidence            988764422  11    22233567899999999863     346889999999999999999999999865432211  


Q ss_pred             -ccchhhhHHHHHHHhhcccccccccCCCCCcc-c-HHHHHHHHHHHhHccCCCCCCCCCHHHHHH-----HhhcCcCCC
Q 047157          707 -EEVDIVLSDWVISCMLSRNLQVLVSHDPEVLS-D-LERFERMAMVGLWCNHPDPNLRPSMKKVIH-----MLEGTLEVG  778 (788)
Q Consensus       707 -~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-~~~~~~l~~l~~~cl~~dP~~RPt~~evl~-----~L~~~~~~~  778 (788)
                       .+....-.......+.++..        +... + .....+..+++...+-.||.+|-++.+++.     +......++
T Consensus       303 rGe~Cr~CQ~~LFesIQEGkY--------eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~ekalp  374 (463)
T KOG0607|consen  303 RGEVCRVCQNKLFESIQEGKY--------EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPEKALP  374 (463)
T ss_pred             CCCccHHHHHHHHHHHhccCC--------cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchhccCC
Confidence             11111111112222222211        1111 0 123456667788888899999999999987     223334555


Q ss_pred             CCCCC
Q 047157          779 MPPLL  783 (788)
Q Consensus       779 ~pp~p  783 (788)
                      .|+..
T Consensus       375 tp~v~  379 (463)
T KOG0607|consen  375 TPQVL  379 (463)
T ss_pred             CCccc
Confidence            55543

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=1.1e-32  Score=295.76  Aligned_cols=270  Identities=24%  Similarity=0.245  Sum_probs=195.4

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchH--HHHHHHHHHHHHhcCCCccccceEeeEEecC--CeEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE--KTNEEFMTELKIIGRTHHKNLVRLLGFCSEE--DKRLL  564 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~~~l  564 (788)
                      .|.+.+.||+|+||.||+|...  .++..||+|.+.....  .....+.+|+.++++++|+||+++++++.+.  +..++
T Consensus         8 ~y~~~~~ig~g~~~~v~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           8 EFEKLNRIGEGTYGIVYRARDT--TSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ceeEeeeeeecCCEEEEEEEEC--CCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            4566789999999999999886  5677899998864322  2233567899999999999999999998765  56899


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+. ++|.+++......+++.++..++.||+.||.|||+.   +++||||||+||+++     .++.+||+|||++.
T Consensus        86 v~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~-----~~~~~kL~dfg~~~  156 (309)
T cd07845          86 VMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLT-----DKGCLKIADFGLAR  156 (309)
T ss_pred             EEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC-----CCCCEEECccceee
Confidence            999996 589888876667789999999999999999999999   999999999999998     77899999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh---HHHHHHH
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL---SDWVISC  720 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~~~  720 (788)
                      ....... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+.........   ....+..
T Consensus       157 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (309)
T cd07845         157 TYGLPAK-PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPG  235 (309)
T ss_pred             ecCCccC-CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchh
Confidence            7654321 1122345778999999865 567899999999999999999999997543222111000000   0000000


Q ss_pred             hhcccccccccCCCCCccc-----HHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEVLSD-----LERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ...................     ....+.+.+++.+||+.||++|||++|++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h  290 (309)
T cd07845         236 FSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES  290 (309)
T ss_pred             hhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            0000000000000000000     1124567789999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=1.7e-32  Score=290.22  Aligned_cols=249  Identities=24%  Similarity=0.316  Sum_probs=190.3

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHH-hcCCCccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKI-IGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~-l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      +.+.+.||+|+||.||++...  .++..||+|+++... ......+..|+.+ ++.++||||+++++++..++..++|||
T Consensus         3 ~~~~~~ig~g~~g~v~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           3 LEVIEELGRGAYGVVDKMRHV--PTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             ceEEEEecccCCeEEEEEEEc--CCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            456788999999999999886  667899999887543 2334456667665 566789999999999999999999999


Q ss_pred             cCCCCCHhHhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          568 LMPNGTLSNFLFH---EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       568 ~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |++ ++|.+++..   .+..+++..++.++.||+.||.|||++  .+++||||||+||+++     .++.+||+|||++.
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~-----~~~~~kl~dfg~~~  152 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLIN-----RNGQVKLCDFGISG  152 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEEC-----CCCCEEEeeccccc
Confidence            996 688887754   235679999999999999999999974  2799999999999998     78899999999988


Q ss_pred             ccCCCCCcccccccCCccccCcccccC----CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRN----VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      ......  ......++..|+|||.+.+    ..++.++|+||||+++|||++|+.||.......      ..+    ...
T Consensus       153 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~----~~~  220 (283)
T cd06617         153 YLVDSV--AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF------QQL----KQV  220 (283)
T ss_pred             cccccc--ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH------HHH----HHH
Confidence            654321  1122457889999998864    456889999999999999999999986421100      000    000


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                       ....        ..........+.+.+++.+||+.+|++||+++++++
T Consensus       221 -~~~~--------~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         221 -VEEP--------SPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             -HhcC--------CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence             0000        000011123467889999999999999999999986

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=1.7e-32  Score=286.87  Aligned_cols=243  Identities=24%  Similarity=0.282  Sum_probs=194.5

Q ss_pred             ccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCC
Q 047157          496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       496 lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      ||.|++|.||++...  ..+..+++|.+....   ....+.+.+|++++++++||||+++++.+.+++..++|+||++++
T Consensus         1 lg~g~~~~v~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (262)
T cd05572           1 LGVGGFGRVELVKVK--SKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGG   78 (262)
T ss_pred             CCCCCceEEEEEEEC--CCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCC
Confidence            689999999999986  557799999886432   234568999999999999999999999999999999999999999


Q ss_pred             CHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCc
Q 047157          573 TLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR  652 (788)
Q Consensus       573 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~  652 (788)
                      +|.+++.+. ..+++..+..++.||+.||.|||++   +++|+||+|+||+++     .++.++|+|||.+.......  
T Consensus        79 ~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~-----~~~~~~l~df~~~~~~~~~~--  147 (262)
T cd05572          79 ELWTILRDR-GLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLD-----SNGYVKLVDFGFAKKLKSGQ--  147 (262)
T ss_pred             cHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEc-----CCCCEEEeeCCcccccCccc--
Confidence            999999654 4578899999999999999999998   999999999999998     78899999999998765432  


Q ss_pred             ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccC
Q 047157          653 TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSH  732 (788)
Q Consensus       653 ~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  732 (788)
                      ......++..|+|||.+.+..++.++|+||||+++|+|++|+.||.......         .... ......        
T Consensus       148 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---------~~~~-~~~~~~--------  209 (262)
T cd05572         148 KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---------MEIY-NDILKG--------  209 (262)
T ss_pred             ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---------HHHH-HHHhcc--------
Confidence            1223467889999999988889999999999999999999999997553210         0000 001100        


Q ss_pred             CCCCcccHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 047157          733 DPEVLSDLERFERMAMVGLWCNHPDPNLRPS-----MKKVIH  769 (788)
Q Consensus       733 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~  769 (788)
                      ......+......+.+++.+||+.||++||+     ++|+++
T Consensus       210 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         210 NGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             CCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence            0000111112567889999999999999999     677665

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-32  Score=295.78  Aligned_cols=208  Identities=21%  Similarity=0.322  Sum_probs=168.8

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecC--CeEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE--DKRLL  564 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~~~l  564 (788)
                      |.+.+.||+|++|.||+|.......+..||+|.+....   ....+.+.+|+.++++++||||+++++++.+.  ...++
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence            45678899999999999998732267799999987633   34456778899999999999999999999888  88999


Q ss_pred             EEecCCCCCHhHhhhcc----CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          565 VYELMPNGTLSNFLFHE----GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ||||+++ +|.+++...    ...++...+..++.||+.||.|||+.   +|+||||||+||+++.++ ..++.+||+||
T Consensus        82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~-~~~~~~kl~Df  156 (316)
T cd07842          82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEG-PERGVVKIGDL  156 (316)
T ss_pred             EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCC-CccceEEECCC
Confidence            9999975 676666322    23678899999999999999999999   999999999999998321 12889999999


Q ss_pred             CCccccCCCCC--cccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCcccc
Q 047157          641 GISKLLNKDQT--RTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRV  702 (788)
Q Consensus       641 g~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~  702 (788)
                      |++........  .......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.....
T Consensus       157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~  221 (316)
T cd07842         157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREA  221 (316)
T ss_pred             ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcc
Confidence            99987643322  11223457889999998765 4578999999999999999999999976543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=5.9e-33  Score=293.98  Aligned_cols=268  Identities=24%  Similarity=0.291  Sum_probs=194.5

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      |...+.||.|++|.||+|+..  .++..|+||.+....  ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (284)
T cd07860           2 FQKVEKIGEGTYGVVYKARNK--LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   79 (284)
T ss_pred             ceeeeeecCCCceEEEEEEEC--CCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence            455688999999999999886  566789999886432  2234578899999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          568 LMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       568 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      |+. ++|.+++... ...+++..+..++.|++.||+|||+.   +++|+||+|+||+++     .++.+||+|||++...
T Consensus        80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~-----~~~~~~l~dfg~~~~~  150 (284)
T cd07860          80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLIN-----TEGAIKLADFGLARAF  150 (284)
T ss_pred             ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEC-----CCCCEEEeeccchhhc
Confidence            995 6898888653 35678999999999999999999998   999999999999998     7889999999998765


Q ss_pred             CCCCCcccccccCCccccCcccccCCC-CCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh---HHHHHHHhh
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL---SDWVISCML  722 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~  722 (788)
                      ..... ......++..|+|||.+.+.. ++.++||||||+++|||+||+.||......+.........   ....++...
T Consensus       151 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
T cd07860         151 GVPVR-TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT  229 (284)
T ss_pred             ccCcc-ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhh
Confidence            43221 112234678899999886644 6889999999999999999999997543221110000000   000000000


Q ss_pred             -----cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          723 -----SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       723 -----~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                           ............... .......+.+++.+||+.||++|||++|++++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  281 (284)
T cd07860         230 SLPDYKPSFPKWARQDFSKV-VPPLDEDGRDLLSQMLHYDPNKRISAKAALAH  281 (284)
T ss_pred             HHHHHHhhcccccccCHHHH-cccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence                 000000000000000 00123456789999999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-33  Score=271.07  Aligned_cols=248  Identities=25%  Similarity=0.395  Sum_probs=198.7

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCC-ccccceEeeEEecCCeEEEEEecCC
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDKRLLVYELMP  570 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lV~e~~~  570 (788)
                      ...||.|.-|.|++..++  .++..+|||.+.+.. .+..++++..+.++.+-+ +|.||+.+|+|..+...++.||.| 
T Consensus        97 l~dlGsGtcG~V~k~~~r--s~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM-  173 (391)
T KOG0983|consen   97 LGDLGSGTCGQVWKMRFR--STGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM-  173 (391)
T ss_pred             HHhhcCCCccceEEEEEc--ccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH-
Confidence            467999999999999987  778899999997543 556678889998887664 899999999999999999999998 


Q ss_pred             CCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCC
Q 047157          571 NGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ  650 (788)
Q Consensus       571 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~  650 (788)
                      ..-++.++..-...+++..+-++...++.||.||.++  .+|+|||+||+|||+|     +.+++||+|||++-.+....
T Consensus       174 s~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlD-----e~GniKlCDFGIsGrlvdSk  246 (391)
T KOG0983|consen  174 STCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLD-----ERGNIKLCDFGISGRLVDSK  246 (391)
T ss_pred             HHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEc-----cCCCEEeecccccceeeccc
Confidence            4466777766667788888889999999999999987  4999999999999999     89999999999998765433


Q ss_pred             CcccccccCCccccCccccc---CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          651 TRTDTNMRGTMGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       651 ~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                        ..+...|.+.|||||.+.   ...|+-++||||||+.|+||.||+.||.+...+-.           +...+.+.   
T Consensus       247 --AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe-----------~ltkvln~---  310 (391)
T KOG0983|consen  247 --AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFE-----------VLTKVLNE---  310 (391)
T ss_pred             --ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHH-----------HHHHHHhc---
Confidence              233457889999999985   34688899999999999999999999987543211           11111111   


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                          ..|...........+.+++..||+.|+.+||...+++++
T Consensus       311 ----ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  311 ----EPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH  349 (391)
T ss_pred             ----CCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence                122222233366788899999999999999999998764

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=1.1e-32  Score=287.22  Aligned_cols=249  Identities=24%  Similarity=0.348  Sum_probs=198.1

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      |.+.+.||+|+||.||++..+  ..+..+++|.+....  ....+.+.+|++++++++|+||+++++.+.+....++|+|
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   79 (257)
T cd08225           2 YEIIKKIGEGSFGKIYLAKAK--SDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME   79 (257)
T ss_pred             ceEEEEecCCCcceEEEEEEc--CCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence            456788999999999999987  566789999886532  2345678899999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCC-CcEEEeecCCccc
Q 047157          568 LMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTN-YMAKISDFGISKL  645 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~-~~~kL~Dfg~a~~  645 (788)
                      |+++++|.+++.... ..+++..+..++.|++.||.|||+.   +++|+||||+||+++     ++ ..+||+|||.+..
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~-----~~~~~~~l~d~~~~~~  151 (257)
T cd08225          80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLS-----KNGMVAKLGDFGIARQ  151 (257)
T ss_pred             cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEc-----CCCCeEEecccccchh
Confidence            999999999986543 3578999999999999999999998   999999999999998     44 4579999999887


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ...... ......+++.|+|||.+.+..++.++||||||++++||++|+.||......+           ...... ...
T Consensus       152 ~~~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----------~~~~~~-~~~  218 (257)
T cd08225         152 LNDSME-LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ-----------LVLKIC-QGY  218 (257)
T ss_pred             ccCCcc-cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH-----------HHHHHh-ccc
Confidence            643322 1223457889999999988889999999999999999999999986442111           111111 111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ....         .......+.+++.+||+.+|++|||+.|+++.
T Consensus       219 ~~~~---------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         219 FAPI---------SPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             CCCC---------CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            1100         11223568889999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=1.7e-32  Score=294.24  Aligned_cols=271  Identities=20%  Similarity=0.261  Sum_probs=193.4

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCC------
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED------  560 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------  560 (788)
                      .|.+.+.||+|+||.||+|...  .++..||||.+....  ......+.+|++++++++||||+++++++...+      
T Consensus        13 ~y~~~~~lg~g~~~~v~~~~~~--~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   90 (310)
T cd07865          13 KYEKLAKIGQGTFGEVFKARHK--KTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY   90 (310)
T ss_pred             heEEEEEeecCCCEEEEEEEEC--CCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence            4667789999999999999876  567799999885432  222345678999999999999999999987654      


Q ss_pred             --eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEe
Q 047157          561 --KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS  638 (788)
Q Consensus       561 --~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~  638 (788)
                        ..++||||+. ++|.+++......+++.++..++.||+.||.|||++   +++|+||||+||+++     .++.+||+
T Consensus        91 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~-----~~~~~kl~  161 (310)
T cd07865          91 KGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILIT-----KDGILKLA  161 (310)
T ss_pred             CceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEC-----CCCcEEEC
Confidence              4599999996 588888866656789999999999999999999999   999999999999998     78899999


Q ss_pred             ecCCccccCCCCCc---ccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh-
Q 047157          639 DFGISKLLNKDQTR---TDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL-  713 (788)
Q Consensus       639 Dfg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~-  713 (788)
                      |||++.........   ......++..|+|||.+.+. .++.++||||||+++|||++|+.||................ 
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~  241 (310)
T cd07865         162 DFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCG  241 (310)
T ss_pred             cCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence            99999866432211   12234567889999988654 47889999999999999999999987543221100000000 


Q ss_pred             --HHHHHHHhhcccc-cccccCC-C-----CCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          714 --SDWVISCMLSRNL-QVLVSHD-P-----EVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       714 --~~~~~~~~~~~~~-~~l~~~~-~-----~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                        ....++....... ..+.... .     ...........+.+++.+||+.||++|||++|++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         242 SITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             CCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence              0000000000000 0000000 0     000000112456789999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-32  Score=291.76  Aligned_cols=268  Identities=23%  Similarity=0.250  Sum_probs=195.2

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .+.+.||.|++|.||+|...  .++..|++|++....  ....+.+.+|++++++++||||+++++++.+++..+++|||
T Consensus         2 ~~~~~l~~g~~~~vy~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~   79 (283)
T cd07835           2 QKVEKIGEGTYGVVYKARDK--LTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF   79 (283)
T ss_pred             chheEecCCCCeEEEEEEEc--CCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence            45678999999999999886  567789999886443  23345788999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          569 MPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       569 ~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      ++ ++|.+++.... ..+++..+..++.|+++||.|||++   +++|+||+|+||+++     .++.++|+|||++....
T Consensus        80 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~-----~~~~~~l~df~~~~~~~  150 (283)
T cd07835          80 LD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLID-----REGALKLADFGLARAFG  150 (283)
T ss_pred             cC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEc-----CCCcEEEeecccccccC
Confidence            95 68999886543 4689999999999999999999998   999999999999998     77899999999997654


Q ss_pred             CCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh---hHHHHHHH--h
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV---LSDWVISC--M  721 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~---~~~~~~~~--~  721 (788)
                      .... ......++..|+|||.+.+. .++.++||||||+++|+|++|+.||...............   .....+..  .
T Consensus       151 ~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (283)
T cd07835         151 VPVR-TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTS  229 (283)
T ss_pred             CCcc-ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhh
Confidence            3221 11223467889999987654 5789999999999999999999999754322110000000   00000000  0


Q ss_pred             hcccccccccCCCCC--cccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          722 LSRNLQVLVSHDPEV--LSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~--~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .......+.......  .........+.+++.+||+.||++|||++|+++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  280 (283)
T cd07835         230 LPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH  280 (283)
T ss_pred             chhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            000000000000000  0011223578899999999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=2.3e-32  Score=288.65  Aligned_cols=243  Identities=23%  Similarity=0.269  Sum_probs=186.2

Q ss_pred             cccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHH---hcCCCccccceEeeEEecCCeEEEEEec
Q 047157          495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKI---IGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       495 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~---l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .||+|+||.||++...  .++..+|+|.+....   ......+.+|..+   +...+||||+.+++.+..++..++||||
T Consensus         1 ~lg~G~~g~Vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~   78 (279)
T cd05633           1 IIGRGGFGEVYGCRKA--DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDL   78 (279)
T ss_pred             CcccCCCeEEEEEEEC--CCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEec
Confidence            4899999999999876  567799999886432   1222334444433   3345799999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++++|.+++... ..+++..+..++.|++.||.|||+.   +|+|+||||+|||++     .++.++|+|||++.....
T Consensus        79 ~~~~~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~-----~~~~~~l~dfg~~~~~~~  149 (279)
T cd05633          79 MNGGDLHYHLSQH-GVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLD-----EHGHVRISDLGLACDFSK  149 (279)
T ss_pred             CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEEC-----CCCCEEEccCCcceeccc
Confidence            9999999988654 4689999999999999999999999   999999999999998     778999999999875533


Q ss_pred             CCCcccccccCCccccCccccc-CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLR-NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~-~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      ..   .....++..|+|||.+. +..++.++||||||+++|||++|+.||.........     ....    ....    
T Consensus       150 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-----~~~~----~~~~----  213 (279)
T cd05633         150 KK---PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-----EIDR----MTLT----  213 (279)
T ss_pred             cC---ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-----HHHH----Hhhc----
Confidence            22   12346899999999886 456899999999999999999999999754221100     0000    0000    


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIHM  770 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~  770 (788)
                          ...  ..+.....++.+++..||+.||++||     +++|++++
T Consensus       214 ----~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         214 ----VNV--ELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             ----CCc--CCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence                000  01122346778899999999999999     69999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=4.8e-33  Score=273.30  Aligned_cols=290  Identities=19%  Similarity=0.258  Sum_probs=207.2

Q ss_pred             hhcccccccccccceEEEEEEeccCcc--eeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEec-CCeEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSE-EDKRL  563 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~--~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~  563 (788)
                      .|+....||+|.||.||+|.-+.....  +.+|||+++...  ........+|+.+++.++||||+.+..++.. +...+
T Consensus        25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~  104 (438)
T KOG0666|consen   25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVW  104 (438)
T ss_pred             HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEE
Confidence            356678899999999999976654553  389999997542  2233456799999999999999999998877 78999


Q ss_pred             EEEecCCCCCHhHhhhc----cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEee
Q 047157          564 LVYELMPNGTLSNFLFH----EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD  639 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~D  639 (788)
                      +++||.+. +|...++.    ..+.++...+..|+.||+.|+.|||++   -|+||||||.|||+..++. +.+.|||+|
T Consensus       105 l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgp-erG~VKIaD  179 (438)
T KOG0666|consen  105 LLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGP-ERGRVKIAD  179 (438)
T ss_pred             EEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCC-ccCeeEeec
Confidence            99999965 78887743    235678888999999999999999999   9999999999999985553 469999999


Q ss_pred             cCCccccCCCCCc--ccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccc-cchhhhHH
Q 047157          640 FGISKLLNKDQTR--TDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESE-EVDIVLSD  715 (788)
Q Consensus       640 fg~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~-~~~~~~~~  715 (788)
                      ||+++.+......  ....++-|..|+|||.+.+. .||++.|||+.|||+.||+|-++.|.+....-... ..+....+
T Consensus       180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~  259 (438)
T KOG0666|consen  180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD  259 (438)
T ss_pred             ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence            9999988654322  22235668999999998765 68999999999999999999998887653322211 11111112


Q ss_pred             HHHHHhhc---ccccccccCCCCCc-----------cc---HH-------HHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          716 WVISCMLS---RNLQVLVSHDPEVL-----------SD---LE-------RFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       716 ~~~~~~~~---~~~~~l~~~~~~~~-----------~~---~~-------~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                      .+...+-.   .....+ ...|+..           .+   ..       ......+|+..+|+.||.+|.|+++.++..
T Consensus       260 rIf~vLG~Pt~~~Wp~l-kk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~  338 (438)
T KOG0666|consen  260 RIFEVLGTPTDKDWPDL-KKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP  338 (438)
T ss_pred             HHHHHcCCCccccchhh-hhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence            12221111   011111 0111110           00   00       012366788899999999999999988754


Q ss_pred             hcCcCCCCCCCCCC
Q 047157          772 EGTLEVGMPPLLHD  785 (788)
Q Consensus       772 ~~~~~~~~pp~p~~  785 (788)
                      - -.+.+.||.|.+
T Consensus       339 y-F~~d~lpp~pt~  351 (438)
T KOG0666|consen  339 Y-FTEDPLPPLPTS  351 (438)
T ss_pred             c-cccCCCCCCccc
Confidence            1 234556666654

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=1.9e-32  Score=290.10  Aligned_cols=266  Identities=23%  Similarity=0.321  Sum_probs=196.8

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      |.+.+.||+|++|.||+|...  .++..|++|.+.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   79 (284)
T cd07836           2 FKQLEKLGEGTYATVYKGRNR--TTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEY   79 (284)
T ss_pred             ceEeeeeccCCceEEEEEEEC--CCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEec
Confidence            456789999999999999886  567799999886543 22345678899999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccC--CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          569 MPNGTLSNFLFHEG--QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       569 ~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      +++ +|.+++....  ..+++..+..++.||+.||.|||+.   +++|+||||+||+++     +++.++|+|||++...
T Consensus        80 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~-----~~~~~~l~d~g~~~~~  150 (284)
T cd07836          80 MDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLIN-----KRGELKLADFGLARAF  150 (284)
T ss_pred             CCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEC-----CCCcEEEeecchhhhh
Confidence            985 8888886543  4579999999999999999999998   999999999999998     7889999999999765


Q ss_pred             CCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh---HHHHHHHhh
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL---SDWVISCML  722 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~  722 (788)
                      ..... ......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||......+.........   ..-.+..+.
T Consensus       151 ~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
T cd07836         151 GIPVN-TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGIS  229 (284)
T ss_pred             cCCcc-ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHh
Confidence            33221 1123456788999998865 356889999999999999999999997654322111100000   000000000


Q ss_pred             cccccccccCCCCCcc------cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          723 SRNLQVLVSHDPEVLS------DLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~------~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                        ....+....+....      .......+.+++.+|++.||.+||+++|+++
T Consensus       230 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         230 --QLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             --cCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence              00111000000000      0122456788999999999999999999985

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-32  Score=290.94  Aligned_cols=268  Identities=22%  Similarity=0.258  Sum_probs=200.5

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeecccchH--HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE--KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .+.+.||+|++|.||++...  .++..+++|.+.....  .....+.+|++++++++|+||+++++++..++..++|+||
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   79 (283)
T cd05118           2 QKLGKIGEGTYGVVYKARDK--LTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF   79 (283)
T ss_pred             ccceeeecCCCceEEEEEcC--CCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence            45678999999999999876  5677899998865432  3456788999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++ +|.+++......+++..+..++.||+.||.|||+.   +|+|+||||+||+++     .++.+||+|||.+.....
T Consensus        80 ~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~-----~~~~~~l~df~~~~~~~~  150 (283)
T cd05118          80 MDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLIN-----TEGVLKLADFGLARSFGS  150 (283)
T ss_pred             cCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEEC-----CCCcEEEeeeeeeEecCC
Confidence            975 88888877667889999999999999999999999   999999999999998     778999999999987654


Q ss_pred             CCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhH---HHHHHHhhc-
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS---DWVISCMLS-  723 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~-  723 (788)
                      .. .......++..|+|||.+.+. .++.++||||||+++|+|++|+.||......+........+.   ...+..... 
T Consensus       151 ~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (283)
T cd05118         151 PV-RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSL  229 (283)
T ss_pred             Cc-ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhh
Confidence            43 122234577889999998776 789999999999999999999999976543221110000000   000000000 


Q ss_pred             --ccccccccCCCCCc--ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          724 --RNLQVLVSHDPEVL--SDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       724 --~~~~~l~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                        ..............  ........+.+++..||+.||.+||++++++.+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~  280 (283)
T cd05118         230 ARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH  280 (283)
T ss_pred             hhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence              00000000000000  012345788999999999999999999999863

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=3.5e-32  Score=283.14  Aligned_cols=247  Identities=26%  Similarity=0.340  Sum_probs=201.0

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      |.+.+.||+|+||.||++...  .++..+++|.+....  ......+.+|++++++++||||+++++++.+....++|+|
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   79 (256)
T cd08530           2 FKVLKKLGKGSYGSVYKVKRL--SDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME   79 (256)
T ss_pred             ceEeeeecCCCceeEEEEEEC--CCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence            456788999999999999876  566789999886432  3445678899999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhcc---CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          568 LMPNGTLSNFLFHE---GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       568 ~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |+++++|.+++.+.   ...+++..++.++.|++.||.|||+.   +++|+||+|+||+++     .++.+||+|||++.
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~-----~~~~~kl~d~g~~~  151 (256)
T cd08530          80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLV-----ANDLVKIGDLGISK  151 (256)
T ss_pred             hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEe-----cCCcEEEeeccchh
Confidence            99999999998652   35678999999999999999999999   999999999999998     67889999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ......   .....++..|+|||.+.+..++.++|+||||+++|||++|+.||......+.        .    ......
T Consensus       152 ~~~~~~---~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~--------~----~~~~~~  216 (256)
T cd08530         152 VLKKNM---AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDL--------R----YKVQRG  216 (256)
T ss_pred             hhccCC---cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--------H----HHHhcC
Confidence            765441   1224578899999999999999999999999999999999999975432110        0    011111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ....         ........+.+++.+|++.+|++||++.|+++.
T Consensus       217 ~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         217 KYPP---------IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             CCCC---------CchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            1111         112445678999999999999999999999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=4e-32  Score=291.22  Aligned_cols=248  Identities=23%  Similarity=0.313  Sum_probs=195.7

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccc---hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD---IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      .++...+.||+|+||.||+|+..  .++..+++|.+...   .....+++.+|+++++.++|+|++++++++......++
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   92 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDV--RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL   92 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEc--CCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEE
Confidence            34555678999999999999886  56678999987532   23445678899999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |+||+. ++|.+++......+++.++..++.|++.||.|||+.   +++||||+|+||+++     .++.+||+|||++.
T Consensus        93 v~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~-----~~~~~kl~dfg~~~  163 (308)
T cd06634          93 VMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLS-----EPGLVKLGDFGSAS  163 (308)
T ss_pred             EEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEEC-----CCCcEEECCcccce
Confidence            999996 688888766566789999999999999999999998   999999999999998     77899999999987


Q ss_pred             ccCCCCCcccccccCCccccCccccc---CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      .....     ....++..|+|||.+.   ...++.++||||||+++|||++|+.||......+.           .. ..
T Consensus       164 ~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-----------~~-~~  226 (308)
T cd06634         164 IMAPA-----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-----------LY-HI  226 (308)
T ss_pred             eecCc-----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH-----------HH-HH
Confidence            65432     2345788999999874   35678899999999999999999999864321110           00 00


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                      .....       +. .........+.+++.+||+.+|++||+++++++.-
T Consensus       227 ~~~~~-------~~-~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~  268 (308)
T cd06634         227 AQNES-------PA-LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR  268 (308)
T ss_pred             hhcCC-------CC-cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence            00000       00 01113345678899999999999999999999764

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=8e-32  Score=280.45  Aligned_cols=251  Identities=28%  Similarity=0.367  Sum_probs=202.4

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecC--CeEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE--DKRLLV  565 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~~~lV  565 (788)
                      +...+.||+|++|.||+|...  .++..|++|.+....  ....+.+.+|++++++++||||+++++.+.+.  ...++|
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv   79 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDK--DTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF   79 (260)
T ss_pred             ceeeeEeeecCceEEEEEEEC--CCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence            345688999999999999886  567789999886544  24567899999999999999999999999988  899999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      +||+++++|.+++.... .+++..+..++.|+++||.|||+.   +++|+||+|+||+++     .++.++|+|||.+..
T Consensus        80 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~-----~~~~~~l~d~~~~~~  150 (260)
T cd06606          80 LEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVD-----SDGVVKLADFGCAKR  150 (260)
T ss_pred             EEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEc-----CCCCEEEcccccEEe
Confidence            99999999999997654 889999999999999999999998   999999999999998     778999999999987


Q ss_pred             cCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ....... ......++..|+|||.+.....+.++||||||+++|+|++|+.||......          ...........
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----------~~~~~~~~~~~  220 (260)
T cd06606         151 LGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP----------MAALYKIGSSG  220 (260)
T ss_pred             cccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch----------HHHHHhccccC
Confidence            6554321 122356788999999998888999999999999999999999999764300          00000000000


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ..       +.  ........+.+++.+|++.||++||++.|+++.
T Consensus       221 ~~-------~~--~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~  257 (260)
T cd06606         221 EP-------PE--IPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH  257 (260)
T ss_pred             CC-------cC--CCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence            00       01  111225678889999999999999999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=4e-32  Score=290.31  Aligned_cols=265  Identities=23%  Similarity=0.255  Sum_probs=196.5

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCC----
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED----  560 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----  560 (788)
                      ...|.+.+.||+|+||.||+|..+  .++..|++|.++...  ......+.+|++++++++||||+++++++.+..    
T Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           6 VDKFDIIGQIGEGTYGQVYKARDK--DTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhheeeeecccCCEEEEEEEEC--CCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            445667789999999999999986  556789999986432  223456788999999999999999999987654    


Q ss_pred             ------eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCc
Q 047157          561 ------KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM  634 (788)
Q Consensus       561 ------~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~  634 (788)
                            ..++|+||+++ +|..++......+++..+..++.||+.||+|||+.   +|+|+||||+||+++     +++.
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~-----~~~~  154 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLN-----NKGQ  154 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC-----CCCc
Confidence                  78999999976 77777766556789999999999999999999999   999999999999998     7889


Q ss_pred             EEEeecCCccccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh
Q 047157          635 AKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL  713 (788)
Q Consensus       635 ~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~  713 (788)
                      +||+|||.+...............++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+....     
T Consensus       155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~-----  229 (302)
T cd07864         155 IKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLEL-----  229 (302)
T ss_pred             EEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH-----
Confidence            9999999998765433222223345778999998864 4578999999999999999999999975422111000     


Q ss_pred             HHHHHHHhhc---ccccccc--------cCCCCCc-----ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          714 SDWVISCMLS---RNLQVLV--------SHDPEVL-----SDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       714 ~~~~~~~~~~---~~~~~l~--------~~~~~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                         .......   .....+.        +......     ........+.+++..||+.||++||+++++++.
T Consensus       230 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  299 (302)
T cd07864         230 ---ISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS  299 (302)
T ss_pred             ---HHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence               0000000   0000000        0000000     000124578899999999999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=3.7e-32  Score=282.94  Aligned_cols=249  Identities=28%  Similarity=0.404  Sum_probs=202.9

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      |.+.+.||+|+||.||++...  .++..+++|.+....  ....+.+.+|++++++++|||++++++.+...+..++|+|
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e   79 (258)
T cd08215           2 YEIIKQIGKGSFGKVYLVRRK--SDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME   79 (258)
T ss_pred             ceEEeeeccCCCeEEEEEEEc--CCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence            456688999999999999986  566789999987543  3556788999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhcc---CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          568 LMPNGTLSNFLFHE---GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       568 ~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ++++++|.+++...   ...+++..+..++.+++.||.|||+.   +++|+||+|+||+++     .++.++|+|||.+.
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~-----~~~~~~l~d~~~~~  151 (258)
T cd08215          80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLT-----SNGLVKLGDFGISK  151 (258)
T ss_pred             ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEc-----CCCcEEECCcccee
Confidence            99999999999765   37789999999999999999999999   999999999999998     77899999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ....... ......+++.|+|||.+.+..++.++||||+|+++++|++|+.||.......           .. ......
T Consensus       152 ~~~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-----------~~-~~~~~~  218 (258)
T cd08215         152 VLSSTVD-LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE-----------LA-LKILKG  218 (258)
T ss_pred             ecccCcc-eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH-----------HH-HHHhcC
Confidence            7654431 2223467889999999988899999999999999999999999986543111           01 111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ....+    +     ......+.+++.+||+.+|++|||++|+++.
T Consensus       219 ~~~~~----~-----~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         219 QYPPI----P-----SQYSSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             CCCCC----C-----CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            11111    1     1234567889999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.5e-32  Score=283.31  Aligned_cols=245  Identities=23%  Similarity=0.226  Sum_probs=188.9

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHh-cCCCccccceEeeEEecCCeEEEEEecC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKII-GRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l-~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      +.||+|+||.||+|...  ..+..||+|.+....   ......+..|..++ ...+||||+++++++..++..++|+||+
T Consensus         2 ~~l~~g~~~~v~~a~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   79 (260)
T cd05611           2 KPISKGAFGSVYLAKKR--STGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYL   79 (260)
T ss_pred             ccCCcCCCeeEEEEEec--CCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEecc
Confidence            56899999999999886  566789999986532   22233445555544 4558999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|.+++... ..+++..+..++.||+.||.|||+.   +++|+||+|+||+++     .++.+||+|||++..... 
T Consensus        80 ~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~-----~~~~~~l~dfg~~~~~~~-  149 (260)
T cd05611          80 NGGDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLID-----QTGHLKLTDFGLSRNGLE-  149 (260)
T ss_pred             CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEC-----CCCcEEEeecccceeccc-
Confidence            999999998654 4678899999999999999999998   999999999999998     778999999999875432 


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                          .....++..|+|||.+.+..++.++||||||+++|||++|..||........            ..........  
T Consensus       150 ----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~------------~~~~~~~~~~--  211 (260)
T cd05611         150 ----NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV------------FDNILSRRIN--  211 (260)
T ss_pred             ----cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH------------HHHHHhcccC--
Confidence                2234578899999999888899999999999999999999999965422110            0111111100  


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                          ............+.+++.+||+.||++||++.++.+.|.
T Consensus       212 ----~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~  250 (260)
T cd05611         212 ----WPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS  250 (260)
T ss_pred             ----CCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence                000001123467889999999999999998876655553

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=2.8e-32  Score=289.48  Aligned_cols=251  Identities=26%  Similarity=0.353  Sum_probs=191.1

Q ss_pred             ccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCC-ccccceEeeEEecCCeEEEEEecC
Q 047157          492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       492 ~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      +.++||+|+||.||++...  .++..+|+|.+.... ......+.+|+.++.++. ||||+++++++..+...+++|||+
T Consensus         8 ~~~~lg~G~~g~vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~   85 (288)
T cd06616           8 DLGEIGRGAFGTVNKMLHK--PSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELM   85 (288)
T ss_pred             HHHHhCCCCceEEEEEEEC--CCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecc
Confidence            4578999999999999886  567799999886432 344567889999999996 999999999999999999999998


Q ss_pred             CCCCHhHhh---hc-cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          570 PNGTLSNFL---FH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       570 ~~gsL~~~l---~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      + ++|.++.   .. ....+++..+..++.|++.||+|||+.  .+|+||||||+||+++     .++.+||+|||++..
T Consensus        86 ~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~-----~~~~~kl~dfg~~~~  157 (288)
T cd06616          86 D-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLD-----RNGNIKLCDFGISGQ  157 (288)
T ss_pred             c-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEc-----cCCcEEEeecchhHH
Confidence            6 4555443   22 235689999999999999999999963  2899999999999998     778899999999876


Q ss_pred             cCCCCCcccccccCCccccCcccccCC---CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNV---PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ......  .....++..|+|||.+.+.   .++.++||||||+++|||++|+.||.....          ...... ...
T Consensus       158 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----------~~~~~~-~~~  224 (288)
T cd06616         158 LVDSIA--KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS----------VFDQLT-QVV  224 (288)
T ss_pred             hccCCc--cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch----------HHHHHh-hhc
Confidence            543221  1233578899999998765   689999999999999999999999964320          000000 000


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ......+     ...........+.+++.+||+.||++|||+++|++.
T Consensus       225 ~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         225 KGDPPIL-----SNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             CCCCCcC-----CCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            0000000     001112345678899999999999999999999864

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=4e-32  Score=293.90  Aligned_cols=266  Identities=18%  Similarity=0.205  Sum_probs=191.6

Q ss_pred             cccccc--ccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          494 KLVGTG--SSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       494 ~~lg~G--~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      +.||+|  +|++||++.+.  ..+..||+|.+...  .....+.+.+|+.+++.++||||+++++++..++..++|+||+
T Consensus         4 ~~ig~g~~~~~~v~~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~   81 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHT--PTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFM   81 (328)
T ss_pred             HHhCCcccCceeEEEEEEc--CCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecc
Confidence            456666  89999999876  56779999988642  2344578899999999999999999999999999999999999


Q ss_pred             CCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          570 PNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       570 ~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      .+++|.+++... ...+++..+..++.||+.||+|||+.   +|+||||||+||+++     .++.++++||+.+.....
T Consensus        82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~-----~~~~~~~~~~~~~~~~~~  153 (328)
T cd08226          82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILIS-----GDGLVSLSGLSHLYSLVR  153 (328)
T ss_pred             cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEe-----CCCcEEEechHHHhhhhc
Confidence            999999998654 34578899999999999999999998   999999999999998     778999999986543322


Q ss_pred             CCCcc------cccccCCccccCcccccCC--CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchh---------
Q 047157          649 DQTRT------DTNMRGTMGYVAPEWLRNV--PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI---------  711 (788)
Q Consensus       649 ~~~~~------~~~~~gt~~y~aPE~~~~~--~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~---------  711 (788)
                      .....      .....++..|+|||++.+.  .++.++||||||+++|||++|+.||..............         
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  233 (328)
T cd08226         154 NGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDI  233 (328)
T ss_pred             cCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccc
Confidence            11110      0112345679999998763  478999999999999999999999975432111000000         


Q ss_pred             hhHHHHHHH-------hh----cccc-----cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          712 VLSDWVISC-------ML----SRNL-----QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       712 ~~~~~~~~~-------~~----~~~~-----~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .........       ..    +...     ...................+.+++.+||+.||++|||++|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~  307 (328)
T cd08226         234 TTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS  307 (328)
T ss_pred             cccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence            000000000       00    0000     0000001111112345677899999999999999999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=6.6e-32  Score=280.62  Aligned_cols=247  Identities=26%  Similarity=0.411  Sum_probs=200.4

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchH--HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE--KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      |.+.+.||+|++|.||++...  ..+..+++|.+.....  ...+.+.+|++++.+++|||++++++++.+.+..++|+|
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   79 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNL--ETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE   79 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEc--CCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence            456789999999999999876  5667899999876543  456789999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++++|.+++... ..+++..+..++.|++.||.|||+.   +|+|+||+|+||+++     .++.++|+|||.+....
T Consensus        80 ~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~-----~~~~~~l~d~~~~~~~~  150 (254)
T cd06627          80 YAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTT-----KDGVVKLADFGVATKLN  150 (254)
T ss_pred             cCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEC-----CCCCEEEeccccceecC
Confidence            99999999998655 5789999999999999999999998   999999999999998     67899999999998765


Q ss_pred             CCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      ..... .....++..|+|||...+..++.++||||+|+++|+|++|+.||........       .  +  . ...... 
T Consensus       151 ~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~-------~--~--~-~~~~~~-  216 (254)
T cd06627         151 DVSKD-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAA-------L--F--R-IVQDDH-  216 (254)
T ss_pred             CCccc-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHH-------H--H--H-HhccCC-
Confidence            43321 2234678899999999888889999999999999999999999864321100       0  0  0 000000 


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                            +.  ......+.+.+++.+||+.+|++|||+.+++.
T Consensus       217 ------~~--~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         217 ------PP--LPEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             ------CC--CCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence                  00  01122456788999999999999999999975

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.98  E-value=6.1e-32  Score=286.91  Aligned_cols=258  Identities=24%  Similarity=0.258  Sum_probs=198.8

Q ss_pred             hcccccccccccceEEEEEEecc-Ccceeeeeeecccch----HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKDI----EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~  563 (788)
                      |.+.+.||+|++|.||++..... ..+..++||.+.+..    ....+.+.+|++++.++ +||||+++++.+..+...+
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~   81 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH   81 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence            45678999999999999986532 355689999886432    23345788999999999 6999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +||||+++++|.+++... ..+++..+..++.|++++|.|||+.   +++|+||+|+||+++     .++.++|+|||++
T Consensus        82 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~-----~~~~~~l~dfg~~  152 (288)
T cd05583          82 LILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLD-----SEGHVVLTDFGLS  152 (288)
T ss_pred             EEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEEC-----CCCCEEEEECccc
Confidence            999999999999998654 4678889999999999999999998   999999999999998     7788999999998


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCC--CCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVP--VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      ...............++..|+|||.+.+..  .+.++||||||+++|||++|..||........       ....... .
T Consensus       153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-------~~~~~~~-~  224 (288)
T cd05583         153 KEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNS-------QSEISRR-I  224 (288)
T ss_pred             cccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccch-------HHHHHHH-H
Confidence            876544333333356788999999987655  78899999999999999999999864321110       0010000 0


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      ..        ..+..  .......+.+++.+||+.||++|||+.++.+.|+-.
T Consensus       225 ~~--------~~~~~--~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~  267 (288)
T cd05583         225 LK--------SKPPF--PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP  267 (288)
T ss_pred             Hc--------cCCCC--CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence            00        01111  111234567889999999999999998888777543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.98  E-value=2.6e-32  Score=290.71  Aligned_cols=261  Identities=23%  Similarity=0.263  Sum_probs=191.7

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCC-ccccceEeeEEecCCe-----
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDK-----  561 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~-----  561 (788)
                      |.+.+.||+|+||.||+|...  .++..|++|.+....  ....+.+.+|+.++++++ ||||+++++++...+.     
T Consensus         3 y~~~~~lg~g~~g~vy~~~~~--~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           3 YEKLEKIGEGTYGKVYKARDK--NTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             ceEeeEecccCCeEEEEEEEC--CCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            556789999999999999886  567799999876432  223457888999999995 6999999999877665     


Q ss_pred             EEEEEecCCCCCHhHhhhcc----CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCC-CCcEE
Q 047157          562 RLLVYELMPNGTLSNFLFHE----GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDT-NYMAK  636 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~-~~~~k  636 (788)
                      .++||||+++ +|.+++...    ...+++..+..++.||+.||.|||++   +|+||||||+||+++     . ++.+|
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~-----~~~~~~k  151 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVD-----KQKGLLK  151 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEe-----cCCCeEE
Confidence            8999999985 888887543    24579999999999999999999999   999999999999998     5 78999


Q ss_pred             EeecCCccccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHH
Q 047157          637 ISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSD  715 (788)
Q Consensus       637 L~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~  715 (788)
                      |+|||++......... .....+++.|+|||++.+ ..++.++||||||+++|+|++|..||......+....       
T Consensus       152 l~dfg~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~-------  223 (295)
T cd07837         152 IADLGLGRAFSIPVKS-YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLH-------  223 (295)
T ss_pred             EeecccceecCCCccc-cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHH-------
Confidence            9999998765332111 122346788999998865 4578999999999999999999999975432211100       


Q ss_pred             HHHHHhhccc---------ccccccC---CCCCcc--cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          716 WVISCMLSRN---------LQVLVSH---DPEVLS--DLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       716 ~~~~~~~~~~---------~~~l~~~---~~~~~~--~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .. .......         .......   .+....  ......++.+++.+||+.||++||+++|++.+
T Consensus       224 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~  291 (295)
T cd07837         224 IF-KLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH  291 (295)
T ss_pred             HH-HHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            00 0000000         0000000   000000  01234668889999999999999999999753

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.98  E-value=5e-32  Score=294.17  Aligned_cols=273  Identities=23%  Similarity=0.299  Sum_probs=196.2

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecC-----CeE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE-----DKR  562 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~~  562 (788)
                      .|.+.++||+|+||.||+|...  .++..||+|.+.... ......+.+|+.++++++||||+++++++...     ...
T Consensus         6 ~y~i~~~lg~G~~g~vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           6 RYQNLSYIGEGAYGMVCSATHK--PTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ceEEEEEEEecCCeEEEEEEEc--CCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            4667789999999999999886  567799999986422 33456788999999999999999999987554     357


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++|+||++ ++|.+++.  ...+++..+..++.|++.||.|||+.   +|+||||||+||+++     .++.+||+|||+
T Consensus        84 ~lv~e~~~-~~l~~~~~--~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~-----~~~~~kl~dfg~  152 (336)
T cd07849          84 YIVQELME-TDLYKLIK--TQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLN-----TNCDLKICDFGL  152 (336)
T ss_pred             EEEehhcc-cCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEC-----CCCCEEECcccc
Confidence            99999996 48887773  34688999999999999999999999   999999999999998     788999999999


Q ss_pred             ccccCCCCCc--ccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh----HH
Q 047157          643 SKLLNKDQTR--TDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL----SD  715 (788)
Q Consensus       643 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~----~~  715 (788)
                      +.........  ......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...............+    .+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~  232 (336)
T cd07849         153 ARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE  232 (336)
T ss_pred             eeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence            8865432211  1123467889999998754 568899999999999999999999996543211100000000    00


Q ss_pred             HHHHHhhcccccccccCCCCC-cc-----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--hhcCc
Q 047157          716 WVISCMLSRNLQVLVSHDPEV-LS-----DLERFERMAMVGLWCNHPDPNLRPSMKKVIHM--LEGTL  775 (788)
Q Consensus       716 ~~~~~~~~~~~~~l~~~~~~~-~~-----~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~~~  775 (788)
                      . ............+...+.. ..     ......++.+++.+||+.||++|||+.|++++  ++...
T Consensus       233 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         233 D-LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             H-HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence            0 0000000000000000000 00     01124568899999999999999999999986  55443

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=9.2e-32  Score=281.73  Aligned_cols=250  Identities=22%  Similarity=0.263  Sum_probs=194.9

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc-----hHHHHHHHHHHHHHhcCCCccccceEeeEEecC--Ce
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-----IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE--DK  561 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~  561 (788)
                      .|.+.+.||+|+||.||+|...  .++..+++|.+...     .....+.+.+|++++++++||||+++++++.+.  ..
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   80 (264)
T cd06653           3 NWRLGKLLGRGAFGEVYLCYDA--DTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKK   80 (264)
T ss_pred             ceeeeeeEccCCCeEEEEEEEc--CCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCE
Confidence            3567789999999999999876  56778999987421     234456889999999999999999999998664  46


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      .++|+||+++++|.+++... ..+++.....++.||+.||.|||+.   +++|+||||+||+++     .++.++|+|||
T Consensus        81 ~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~-----~~~~~~l~dfg  151 (264)
T cd06653          81 LSIFVEYMPGGSIKDQLKAY-GALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRD-----SAGNVKLGDFG  151 (264)
T ss_pred             EEEEEEeCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEc-----CCCCEEECccc
Confidence            88999999999999998654 3478888999999999999999999   999999999999998     77889999999


Q ss_pred             CccccCCCCC--cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHH
Q 047157          642 ISKLLNKDQT--RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVIS  719 (788)
Q Consensus       642 ~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  719 (788)
                      ++........  .......++..|+|||.+.+..++.++||||||+++|||++|+.||........           ...
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----------~~~  220 (264)
T cd06653         152 ASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA-----------IFK  220 (264)
T ss_pred             cccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH-----------HHH
Confidence            9986543211  111234578899999999988899999999999999999999999964311110           000


Q ss_pred             HhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          720 CMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       720 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ...         .......+....+.+.+++.+|++ +|..||++.+++.+
T Consensus       221 ~~~---------~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~  261 (264)
T cd06653         221 IAT---------QPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH  261 (264)
T ss_pred             HHc---------CCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence            000         001111122344668889999998 57999999988763

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.98  E-value=1.5e-31  Score=287.39  Aligned_cols=243  Identities=26%  Similarity=0.342  Sum_probs=192.2

Q ss_pred             ccccccccccceEEEEEEeccCcceeeeeeecccc---hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD---IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       492 ~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      ..+.||+|+||+||+|...  .++..|++|.+...   .....+.+.+|++++++++|||++++++++.+.+..++||||
T Consensus        25 ~~~~lg~g~~g~v~~~~~~--~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          25 GLHEIGHGSFGAVYFATNS--HTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             cceeeccCCCeEEEEEEEC--CCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            3467999999999999876  56778999988643   233446788999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +. ++|.+++......+++.++..++.||+.||.|||+.   +++|+||+|+||+++     .++.+||+|||++.....
T Consensus       103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~-----~~~~~kL~dfg~~~~~~~  173 (313)
T cd06633         103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLT-----EPGQVKLADFGSASKSSP  173 (313)
T ss_pred             CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEEC-----CCCCEEEeecCCCcccCC
Confidence            95 578888866666789999999999999999999998   999999999999998     778999999998864322


Q ss_pred             CCCcccccccCCccccCccccc---CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                           .....++..|+|||.+.   ...++.++||||||+++|||++|..||........           ..... ...
T Consensus       174 -----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~-----------~~~~~-~~~  236 (313)
T cd06633         174 -----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-----------LYHIA-QND  236 (313)
T ss_pred             -----CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH-----------HHHHH-hcC
Confidence                 12346788999999974   45688999999999999999999999865421110           00000 000


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .       +. .........+.+++.+||+.+|.+||++.++++.
T Consensus       237 ~-------~~-~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         237 S-------PT-LQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             C-------CC-CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            0       00 0111223457789999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.98  E-value=5.5e-32  Score=294.05  Aligned_cols=270  Identities=23%  Similarity=0.291  Sum_probs=195.8

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCC-CccccceEeeEEecC--CeE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEE--DKR  562 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~--~~~  562 (788)
                      ..|.+.+.||+|+||.||+|...  .++..+++|++...  .......+.+|+.+++++ +||||+++++++...  ...
T Consensus         7 ~~y~~~~~lg~g~~~~v~~~~~~--~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~   84 (337)
T cd07852           7 RKYEILQKLGKGAYGIVWKAIDR--RTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI   84 (337)
T ss_pred             hHHHHhHhhcCCCCeeEEEEEEc--CCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence            45667789999999999999876  56678999988542  233445677899999999 999999999988653  468


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||++ ++|.+++...  .+++..+..++.||+.||.|||+.   +|+|+||||+||+++     .++.+||+|||+
T Consensus        85 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~-----~~~~~kl~d~g~  153 (337)
T cd07852          85 YLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLN-----SDCRVKLADFGL  153 (337)
T ss_pred             EEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEc-----CCCcEEEeeccc
Confidence            99999997 5999888554  778889999999999999999998   999999999999998     888999999999


Q ss_pred             ccccCCCCC----cccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh---H
Q 047157          643 SKLLNKDQT----RTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL---S  714 (788)
Q Consensus       643 a~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~  714 (788)
                      +........    .......++..|+|||.+.+ ..++.++||||||+++|+|++|+.||......+.........   .
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~  233 (337)
T cd07852         154 ARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPS  233 (337)
T ss_pred             hhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence            986643322    12233567889999998754 567899999999999999999999997543322111000000   0


Q ss_pred             HHHHHHhhccccccccc----CCCCC--cccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          715 DWVISCMLSRNLQVLVS----HDPEV--LSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       715 ~~~~~~~~~~~~~~l~~----~~~~~--~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .-....+.......++.    .....  .........+.+++.+||+.||++|||+.+++++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         234 AEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence            00000000000000000    00000  0001134678899999999999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.98  E-value=3.1e-32  Score=290.02  Aligned_cols=262  Identities=23%  Similarity=0.264  Sum_probs=192.9

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .|.+.+.||+|++|+||+|...  .++..|++|.+....  ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus         3 ~y~~~~~l~~g~~~~v~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (294)
T PLN00009          3 QYEKVEKIGEGTYGVVYKARDR--VTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF   80 (294)
T ss_pred             ceEEEEEecCCCCEEEEEEEec--CCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence            3566789999999999999876  567789999886432  233467889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||++ ++|.+++.... ...++..+..++.||+.||+|||++   +++|+||+|+||+++.    .+..+||+|||++..
T Consensus        81 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~----~~~~~kl~dfg~~~~  152 (294)
T PLN00009         81 EYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDR----RTNALKLADFGLARA  152 (294)
T ss_pred             eccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEEC----CCCEEEEcccccccc
Confidence            9996 57887775433 3357888889999999999999999   9999999999999972    345799999999976


Q ss_pred             cCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ...... ......+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||......+....        ........
T Consensus       153 ~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~--------~~~~~~~~  223 (294)
T PLN00009        153 FGIPVR-TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFK--------IFRILGTP  223 (294)
T ss_pred             cCCCcc-ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--------HHHHhCCC
Confidence            543211 1123456789999998865 4578999999999999999999999975432111000        00000000


Q ss_pred             ---------cccccccCCCCCc------ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          725 ---------NLQVLVSHDPEVL------SDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       725 ---------~~~~l~~~~~~~~------~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                               .+.......+...      ......+++.+++.+|++.+|++||++.++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        224 NEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             ChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence                     0000000000000      01122456788999999999999999999986

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.98  E-value=7.5e-32  Score=285.79  Aligned_cols=260  Identities=23%  Similarity=0.270  Sum_probs=192.7

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCC---CccccceEeeEEecCCe---
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRT---HHKNLVRLLGFCSEEDK---  561 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l---~hpniv~~~~~~~~~~~---  561 (788)
                      |.+.+.||+|+||.||+|..+  .++..+++|.+....  ......+.+|+.+++++   +||||+++++++...+.   
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~   78 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDL--NTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRE   78 (287)
T ss_pred             CeEEEEecccCceEEEEEEEC--CCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCC
Confidence            345688999999999999986  457799999986332  22334566787776555   69999999999988776   


Q ss_pred             --EEEEEecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEe
Q 047157          562 --RLLVYELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS  638 (788)
Q Consensus       562 --~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~  638 (788)
                        .+++|||++ ++|.+++.... ..+++..+..++.|+++||.|||+.   +++|+||+|+||+++     .++.+||+
T Consensus        79 ~~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~-----~~~~~~l~  149 (287)
T cd07838          79 LKLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVT-----SDGQVKIA  149 (287)
T ss_pred             ceeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEc-----cCCCEEEe
Confidence              999999997 48988886543 3689999999999999999999998   999999999999998     77899999


Q ss_pred             ecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHH
Q 047157          639 DFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVI  718 (788)
Q Consensus       639 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  718 (788)
                      |||.+.........  ....++..|+|||.+.+..++.++||||||+++|||++|+.||......+...       ....
T Consensus       150 dfg~~~~~~~~~~~--~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~-------~~~~  220 (287)
T cd07838         150 DFGLARIYSFEMAL--TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLD-------KIFD  220 (287)
T ss_pred             ccCcceeccCCccc--ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHH-------HHHH
Confidence            99999876443221  22346888999999999899999999999999999999999987543221110       0000


Q ss_pred             HHhhcccc---------cccccCCCCCc---ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          719 SCMLSRNL---------QVLVSHDPEVL---SDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       719 ~~~~~~~~---------~~l~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ........         ...........   ........+.+++.+||+.||++||+++|+++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         221 VIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             HcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence            00000000         00000000000   01133467788999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.98  E-value=7.5e-32  Score=285.31  Aligned_cols=268  Identities=23%  Similarity=0.303  Sum_probs=196.8

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchH-HHHHHHHHHHHHhcCCC-ccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE-KTNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      |.+.+.||+|++|+||+|+..  .++..|+||++..... .......+|+..+++++ ||||+++++++.+++..++|||
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   78 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNK--ETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE   78 (283)
T ss_pred             CeeheeeccCCceEEEEEEEC--CCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence            346788999999999999986  5667899999865432 22334567999999998 9999999999999999999999


Q ss_pred             cCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          568 LMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      |+ +++|.+++.... ..+++..+..++.|++.+|.|||++   +++|+||+|+||+++     .++.++|+|||.+...
T Consensus        79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~-----~~~~~~l~d~~~~~~~  149 (283)
T cd07830          79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVS-----GPEVVKIADFGLAREI  149 (283)
T ss_pred             cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEc-----CCCCEEEeecccceec
Confidence            99 889999886653 5779999999999999999999998   999999999999998     7889999999999865


Q ss_pred             CCCCCcccccccCCccccCccccc-CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchh-----hhHHHHHHH
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLR-NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI-----VLSDWVISC  720 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~-----~~~~~~~~~  720 (788)
                      .....  .....++..|+|||.+. ...++.++||||||++++||++|+.||......+.......     ....|....
T Consensus       150 ~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (283)
T cd07830         150 RSRPP--YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGY  227 (283)
T ss_pred             cCCCC--cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHh
Confidence            43222  12245788999999874 45678999999999999999999999975533221110000     000011010


Q ss_pred             hhcccccccccCCCCC-ccc--HHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEV-LSD--LERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~-~~~--~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .........+...... ...  ......+.+++.+||+.||++|||++|++.+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  280 (283)
T cd07830         228 KLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH  280 (283)
T ss_pred             hhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence            0111111110000000 000  0113678899999999999999999999764

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.98  E-value=6.2e-32  Score=287.64  Aligned_cols=265  Identities=18%  Similarity=0.194  Sum_probs=184.6

Q ss_pred             HHHHHhhcccccccccccceEEEEEEeccCc-ceeeeeeecccchHHH-----------HHHHHHHHHHhcCCCccccce
Q 047157          484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDT-QIEIAVKKLEKDIEKT-----------NEEFMTELKIIGRTHHKNLVR  551 (788)
Q Consensus       484 ~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~-~~~vavK~l~~~~~~~-----------~~~~~~E~~~l~~l~hpniv~  551 (788)
                      ++....|.+.++||+|+||+||+|....... ...+++|.........           ......+...+..+.|+||++
T Consensus         8 ~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~   87 (294)
T PHA02882          8 DITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPK   87 (294)
T ss_pred             ccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCc
Confidence            3444567788999999999999998763211 3455666432211110           112234445566789999999


Q ss_pred             EeeEEecCC----eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccC
Q 047157          552 LLGFCSEED----KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLK  627 (788)
Q Consensus       552 ~~~~~~~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  627 (788)
                      +++.+....    ..++++|++. .++.+.+... ...++..+..++.|++.||.|||++   +|+||||||+|||++  
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~--  160 (294)
T PHA02882         88 YYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVD--  160 (294)
T ss_pred             EEEeeeEecCCceEEEEEEehhc-cCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEc--
Confidence            998765443    4467888764 4666665432 3456788899999999999999998   999999999999998  


Q ss_pred             CCCCCCcEEEeecCCccccCCCCC------cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccc
Q 047157          628 TLDTNYMAKISDFGISKLLNKDQT------RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSR  701 (788)
Q Consensus       628 ~~~~~~~~kL~Dfg~a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~  701 (788)
                         .++.++|+|||+++.+.....      .......||+.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus       161 ---~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~  237 (294)
T PHA02882        161 ---GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFG  237 (294)
T ss_pred             ---CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccc
Confidence               778899999999986643211      11123468999999999999999999999999999999999999997652


Q ss_pred             cccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          702 VEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                      .....  ......++. .....+..        ..   ....+.+.+++..|++.+|++||++.++++.|+
T Consensus       238 ~~~~~--~~~~~~~~~-~~~~~~~~--------~~---~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~  294 (294)
T PHA02882        238 HNGNL--IHAAKCDFI-KRLHEGKI--------KI---KNANKFIYDFIECVTKLSYEEKPDYDALIKIFD  294 (294)
T ss_pred             cchHH--HHHhHHHHH-HHhhhhhh--------cc---CCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence            21110  000001111 11111110        00   012466888999999999999999999998874

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.98  E-value=6e-32  Score=288.19  Aligned_cols=253  Identities=23%  Similarity=0.365  Sum_probs=193.3

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .+.+.+.||+|++|.||+|...  .++..||||.+.... .....++..|+.++.+. .||||+++++++.+....++||
T Consensus        16 ~~~~~~~lg~g~~~~v~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   93 (296)
T cd06618          16 DLENLGEIGSGTCGQVYKMRFK--KTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM   93 (296)
T ss_pred             hheeeeEeeccCCeEEEEEEEC--CCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence            3556789999999999999886  557799999986532 33445677788777666 4999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||++ ++|.+++......+++..+..++.||+.||+|||+.  .+|+||||+|+||+++     .++.+||+|||++..+
T Consensus        94 e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~-----~~~~~kL~dfg~~~~~  165 (296)
T cd06618          94 ELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLD-----ASGNVKLCDFGISGRL  165 (296)
T ss_pred             eccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEc-----CCCCEEECccccchhc
Confidence            9985 578887766556789999999999999999999973  2899999999999998     7889999999998765


Q ss_pred             CCCCCcccccccCCccccCcccccCCC----CCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVP----VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ......  ....++..|+|||.+.+..    ++.++||||||+++|||++|+.||.......          +.... ..
T Consensus       166 ~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----------~~~~~-~~  232 (296)
T cd06618         166 VDSKAK--TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF----------EVLTK-IL  232 (296)
T ss_pred             cCCCcc--cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH----------HHHHH-Hh
Confidence            432222  2235678999999987553    7889999999999999999999996431110          00000 11


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                      .....       .........+++.+++.+||+.||++||++++++++-
T Consensus       233 ~~~~~-------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~  274 (296)
T cd06618         233 QEEPP-------SLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP  274 (296)
T ss_pred             cCCCC-------CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence            11100       0001112345688899999999999999999998653

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.98  E-value=3.5e-32  Score=295.43  Aligned_cols=274  Identities=22%  Similarity=0.264  Sum_probs=197.9

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecC-----Ce
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE-----DK  561 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~  561 (788)
                      .|.+.+.||+|+||+||++...  .++..|+||.+...  .....+.+.+|+.+++.++||||+++++++...     ..
T Consensus         6 ~y~~~~~lg~G~~~~vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           6 KYVPIKPIGRGAYGIVCSAKNS--ETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ceeEEEEeccCCCeEEEEEEec--CCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            3556789999999999999876  67779999988643  233345677899999999999999999988654     35


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      .++|+||+. ++|.+++... ..+++..+..++.||+.||.|||++   +++|+||||+||+++     .++.+||+|||
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~-----~~~~~kL~Dfg  153 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLN-----ANCDLKICDFG  153 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEc-----CCCCEEECcCc
Confidence            799999995 6898888544 5689999999999999999999999   999999999999998     77899999999


Q ss_pred             CccccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh---HHHH
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL---SDWV  717 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~~  717 (788)
                      ++....... .......++..|+|||.+.. ..++.++||||||+++|+|++|+.||................   ..-.
T Consensus       154 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  232 (337)
T cd07858         154 LARTTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEED  232 (337)
T ss_pred             cccccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHH
Confidence            998764332 12223457889999998764 468899999999999999999999997543211000000000   0000


Q ss_pred             HHHhhcccccccccC---CCCCc---ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--hhcCc
Q 047157          718 ISCMLSRNLQVLVSH---DPEVL---SDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM--LEGTL  775 (788)
Q Consensus       718 ~~~~~~~~~~~l~~~---~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~~~  775 (788)
                      ............+..   .+...   ........+.+++.+||+.||++|||++|+++.  ++...
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~  298 (337)
T cd07858         233 LGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH  298 (337)
T ss_pred             hhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence            000000000000000   00000   011234668899999999999999999999987  65543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.98  E-value=3.5e-32  Score=294.69  Aligned_cols=274  Identities=22%  Similarity=0.265  Sum_probs=203.1

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCC-----eE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED-----KR  562 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~~  562 (788)
                      |.+.+.||+|++|.||+|...  ..+..+++|.+....  ....+.+.+|+++++.++||||+++++++...+     ..
T Consensus         2 y~i~~~ig~g~~~~v~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~   79 (330)
T cd07834           2 YELLKPIGSGAYGVVCSAVDK--RTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV   79 (330)
T ss_pred             ceeeeeecCCCCeEEEEEEeC--CCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence            566789999999999999876  557789999887543  445568899999999999999999999988775     78


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||++ ++|.+++... ..+++..+..++.||+.||+|||+.   +|+|+||||+||+++     .++.++|+|||+
T Consensus        80 ~lv~e~~~-~~l~~~l~~~-~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~-----~~~~~~L~dfg~  149 (330)
T cd07834          80 YIVTELME-TDLHKVIKSP-QPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVN-----SNCDLKICDFGL  149 (330)
T ss_pred             EEEecchh-hhHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEc-----CCCCEEEcccCc
Confidence            99999997 5898888554 4789999999999999999999999   999999999999998     778999999999


Q ss_pred             ccccCCCCC--cccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHH---
Q 047157          643 SKLLNKDQT--RTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDW---  716 (788)
Q Consensus       643 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~---  716 (788)
                      +........  .......++..|+|||.+.+. .++.++||||||+++|+|++|+.||......+............   
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  229 (330)
T cd07834         150 ARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEE  229 (330)
T ss_pred             eEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChh
Confidence            987654431  122334578899999999887 88999999999999999999999997654322111000000000   


Q ss_pred             HHHHhhcccccccccCCCCC-cc-----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--hhcCc
Q 047157          717 VISCMLSRNLQVLVSHDPEV-LS-----DLERFERMAMVGLWCNHPDPNLRPSMKKVIHM--LEGTL  775 (788)
Q Consensus       717 ~~~~~~~~~~~~l~~~~~~~-~~-----~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~~~  775 (788)
                      .+...........+...... ..     .......+.+++.+||+.+|++|||+++++++  +++..
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~  296 (330)
T cd07834         230 DLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH  296 (330)
T ss_pred             HhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence            00000000000000000000 00     01134567899999999999999999999985  55543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.98  E-value=4.1e-32  Score=294.58  Aligned_cols=271  Identities=22%  Similarity=0.287  Sum_probs=196.9

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEec----CCe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSE----EDK  561 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----~~~  561 (788)
                      ..|.+.+.||+|++|.||+|...  .++..|++|++....  ....+.+.+|+.++++++||||+++++++..    ...
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~--~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   82 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDT--RSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD   82 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEc--CCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence            34566789999999999999876  567799999986542  2345677889999999999999999998753    356


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      .++|+||+. ++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||
T Consensus        83 ~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~-----~~~~~kl~dfg  152 (334)
T cd07855          83 VYVVMDLME-SDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVN-----EDCELRIGDFG  152 (334)
T ss_pred             EEEEEehhh-hhHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEc-----CCCcEEecccc
Confidence            899999995 6898888544 4589999999999999999999998   999999999999998     78899999999


Q ss_pred             CccccCCCCCc---ccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh---H
Q 047157          642 ISKLLNKDQTR---TDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL---S  714 (788)
Q Consensus       642 ~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~  714 (788)
                      ++.........   ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...............+   .
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~  232 (334)
T cd07855         153 MARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPS  232 (334)
T ss_pred             cceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCCh
Confidence            99765432221   1123467889999998865 468899999999999999999999996543221100000000   0


Q ss_pred             HHHHHHhhcccccccccCCC-CCcc-----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          715 DWVISCMLSRNLQVLVSHDP-EVLS-----DLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       715 ~~~~~~~~~~~~~~l~~~~~-~~~~-----~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ...........+.......+ ....     .....+.+.+++.+||+.||++|||+++++.+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  294 (334)
T cd07855         233 EEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH  294 (334)
T ss_pred             hHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            00000000000111110000 0000     01235678999999999999999999999874

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.98  E-value=3.2e-32  Score=266.42  Aligned_cols=251  Identities=24%  Similarity=0.263  Sum_probs=197.1

Q ss_pred             hccc-ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEec----CCeEE
Q 047157          490 KGFS-KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSE----EDKRL  563 (788)
Q Consensus       490 ~~~~-~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~----~~~~~  563 (788)
                      |.++ ++||-|-.|.|..+.++  .+++..|+|.+....     ..++|+++.-+. .|||||.++++++.    ...+.
T Consensus        63 Y~is~qvLG~GinGkV~~C~~k--~T~ekfALKvL~Ds~-----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLL  135 (400)
T KOG0604|consen   63 YSISWQVLGAGINGKVVQCVHK--RTQEKFALKVLLDSP-----KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLL  135 (400)
T ss_pred             heehhhhhccccCCceEEEEec--cchhhhHHHHHhcCH-----HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeE
Confidence            4444 78999999999999887  788899999997542     334777765555 69999999998754    45778


Q ss_pred             EEEecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          564 LVYELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      +|||.|+||.|...+.+++ ..+++.++..|++||+.|+.|||+.   +|.||||||+|+|.....  .+-.+||+|||+
T Consensus       136 iVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~--~na~lKLtDfGF  210 (400)
T KOG0604|consen  136 IVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTS--PNAPLKLTDFGF  210 (400)
T ss_pred             eeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCC--CCcceEeccccc
Confidence            9999999999999997764 4579999999999999999999999   999999999999998655  778899999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      |+.-...  ......+-|+.|.|||++...+|+...|+||+||++|-|++|-+||...........        ....+.
T Consensus       211 AK~t~~~--~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispg--------Mk~rI~  280 (400)
T KOG0604|consen  211 AKETQEP--GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--------MKRRIR  280 (400)
T ss_pred             ccccCCC--ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChh--------HHhHhh
Confidence            9975432  233456789999999999999999999999999999999999999975422111110        111111


Q ss_pred             cccccccccCCCCCccc--HHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          723 SRNLQVLVSHDPEVLSD--LERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~--~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .+        .-+...+  ....+...++|+.+|..+|.+|.|++|+++.
T Consensus       281 ~g--------qy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h  322 (400)
T KOG0604|consen  281 TG--------QYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH  322 (400)
T ss_pred             cc--------CccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence            11        1111111  1345677789999999999999999999864

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.98  E-value=2.5e-31  Score=285.95  Aligned_cols=261  Identities=17%  Similarity=0.163  Sum_probs=186.9

Q ss_pred             ccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCCCHhHh
Q 047157          500 SSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNF  577 (788)
Q Consensus       500 ~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~gsL~~~  577 (788)
                      +++.||.+...  .++..||+|++...  .....+.+.+|++++++++||||+++++++.+.+..+++|||+++++|.++
T Consensus        12 ~~~~v~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~   89 (314)
T cd08216          12 DLMIVHLAKHK--PTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDL   89 (314)
T ss_pred             CCceEEEEEec--CCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHH
Confidence            33445555444  46779999998654  345567899999999999999999999999999999999999999999999


Q ss_pred             hhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCC-----
Q 047157          578 LFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT-----  651 (788)
Q Consensus       578 l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~-----  651 (788)
                      +... ...+++..+..++.|++.||.|||++   +|+||||||+||+++     .++.+||+|||.+........     
T Consensus        90 l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~-----~~~~~kl~d~~~~~~~~~~~~~~~~~  161 (314)
T cd08216          90 LKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLS-----GDGKVVLSGLRYSVSMIKHGKRQRVV  161 (314)
T ss_pred             HHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEe-----cCCceEEecCccceeecccccccccc
Confidence            9754 34678889999999999999999999   999999999999998     778999999998875532211     


Q ss_pred             -cccccccCCccccCcccccC--CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccc-hhhhHHHHH---HHhhcc
Q 047157          652 -RTDTNMRGTMGYVAPEWLRN--VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEV-DIVLSDWVI---SCMLSR  724 (788)
Q Consensus       652 -~~~~~~~gt~~y~aPE~~~~--~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~  724 (788)
                       .......++..|+|||++..  ..++.++||||||+++|||++|+.||............ ......+..   ......
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (314)
T cd08216         162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYED  241 (314)
T ss_pred             ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcC
Confidence             11122456778999999865  35889999999999999999999999754221100000 000000000   000000


Q ss_pred             cccc----c----ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 NLQV----L----VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 ~~~~----l----~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ....    .    ...............++.+++.+||+.||++|||+++++++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  295 (314)
T cd08216         242 SMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH  295 (314)
T ss_pred             CcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence            0000    0    00001111122334678899999999999999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.98  E-value=1.4e-33  Score=322.17  Aligned_cols=247  Identities=29%  Similarity=0.427  Sum_probs=196.4

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPN  571 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~  571 (788)
                      ..||.|.||.||.|...  +++...|+|.+....  ....+.+.+|+.++..|+|||+|+++|+-.+++..+|.||||++
T Consensus      1241 ~~Ig~G~fG~VYtavN~--~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~ 1318 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNL--DTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEG 1318 (1509)
T ss_pred             cccCCcceeeeEEeecC--CccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhcc
Confidence            57999999999999887  788899999875432  34456788999999999999999999999999999999999999


Q ss_pred             CCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCC
Q 047157          572 GTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT  651 (788)
Q Consensus       572 gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~  651 (788)
                      |+|.+++.+. +..++.....+..|++.|++|||++   +||||||||.||+++     .++.+|++|||.|..+.....
T Consensus      1319 GsLa~ll~~g-ri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld-----~~g~iK~~DFGsa~ki~~~~~ 1389 (1509)
T KOG4645|consen 1319 GSLASLLEHG-RIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLD-----FNGLIKYGDFGSAVKIKNNAQ 1389 (1509)
T ss_pred             CcHHHHHHhc-chhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeee-----cCCcEEeecccceeEecCchh
Confidence            9999999543 4455555666889999999999999   999999999999999     788999999999998865531


Q ss_pred             ---cccccccCCccccCcccccCC---CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          652 ---RTDTNMRGTMGYVAPEWLRNV---PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       652 ---~~~~~~~gt~~y~aPE~~~~~---~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                         .......||+.|||||++.+.   ...-++||||+||++.||+||++||...+.+            |+.-..    
T Consensus      1390 ~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne------------~aIMy~---- 1453 (1509)
T KOG4645|consen 1390 TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE------------WAIMYH---- 1453 (1509)
T ss_pred             cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch------------hHHHhH----
Confidence               122346799999999999654   3456899999999999999999999754211            111110    


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                        .-..+.|+...  ....+-.+++..||+.||+.|.++.|++++=
T Consensus      1454 --V~~gh~Pq~P~--~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1454 --VAAGHKPQIPE--RLSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred             --HhccCCCCCch--hhhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence              01111222222  2445567889999999999999999888754

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.98  E-value=1.4e-31  Score=291.29  Aligned_cols=269  Identities=21%  Similarity=0.291  Sum_probs=193.0

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecC------Ce
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE------DK  561 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------~~  561 (788)
                      |...+.||+|+||.||+|...  .++..||+|++....  ......+.+|++++++++||||+++++++...      ..
T Consensus        17 y~~~~~ig~g~~g~v~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          17 YTSLKQVGSGAYGSVCSAIDK--RTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             eEEEEEeeecCCeEEEEEEeC--CCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            445689999999999999876  567799999886432  23345688999999999999999999998654      34


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      .++|+||+.. +|..++   +..+++..+..++.|++.||+|||+.   +|+||||||+||+++     .++.+||+|||
T Consensus        95 ~~lv~e~~~~-~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~-----~~~~~kL~dfg  162 (342)
T cd07879          95 FYLVMPYMQT-DLQKIM---GHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVN-----EDCELKILDFG  162 (342)
T ss_pred             EEEEeccccc-CHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEC-----CCCCEEEeeCC
Confidence            6999999964 776655   24578899999999999999999999   999999999999998     78899999999


Q ss_pred             CccccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchh----hhHHH
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI----VLSDW  716 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~----~~~~~  716 (788)
                      ++......    .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||..............    .... 
T Consensus       163 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-  237 (342)
T cd07879         163 LARHADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPE-  237 (342)
T ss_pred             CCcCCCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH-
Confidence            98764322    123456888999999866 4688999999999999999999999975432111000000    0000 


Q ss_pred             HHHHhhcccccccccCCCCCcc-c-----HHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--hhcCcCC
Q 047157          717 VISCMLSRNLQVLVSHDPEVLS-D-----LERFERMAMVGLWCNHPDPNLRPSMKKVIHM--LEGTLEV  777 (788)
Q Consensus       717 ~~~~~~~~~~~~l~~~~~~~~~-~-----~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~~~~~  777 (788)
                      .................+.... .     ......+.+++.+||+.||++||+++|++.+  +++..+.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~  306 (342)
T cd07879         238 FVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA  306 (342)
T ss_pred             HHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence            0000000000000000000000 0     0123567899999999999999999999954  6665543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.98  E-value=7e-32  Score=285.24  Aligned_cols=267  Identities=24%  Similarity=0.271  Sum_probs=198.7

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .+.+.||+|++|.||+|+..  .++..+++|.+....  ....+.+..|++++++++|+||+++++++.+.+..++|+||
T Consensus         2 ~~~~~ig~g~~~~vy~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   79 (282)
T cd07829           2 EKLEKLGEGTYGVVYKARDK--KTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY   79 (282)
T ss_pred             eeehcccccCcceEEEeeec--CCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence            34578999999999999886  567799999987643  33456788999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      ++ ++|.+++......+++..+..++.|++.||.|||++   +|+|+||+|+||+++     .++.+||+|||.+.....
T Consensus        80 ~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~-----~~~~~~l~d~g~~~~~~~  150 (282)
T cd07829          80 CD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILIN-----RDGVLKLADFGLARAFGI  150 (282)
T ss_pred             cC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEc-----CCCCEEEecCCcccccCC
Confidence            97 599999976656789999999999999999999999   999999999999998     788999999999987644


Q ss_pred             CCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh---HHHHHHHhhcc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL---SDWVISCMLSR  724 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  724 (788)
                      ... ......++..|+|||.+.+. .++.++||||||+++|||++|+.||......+.........   ....+......
T Consensus       151 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (282)
T cd07829         151 PLR-TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKL  229 (282)
T ss_pred             Ccc-ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccc
Confidence            322 12223456789999998766 88999999999999999999999997653221111000000   00000000000


Q ss_pred             c-ccccccCCCCCc---ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          725 N-LQVLVSHDPEVL---SDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       725 ~-~~~l~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      . ............   ........+.+++.+||+.||++||++++++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         230 PDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             ccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence            0 000000000000   00112457899999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.98  E-value=1.9e-31  Score=281.58  Aligned_cols=243  Identities=24%  Similarity=0.285  Sum_probs=186.3

Q ss_pred             cccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHH---HHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTEL---KIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       495 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~---~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .||+|+||.||++...  .+++.||+|.+....   ......+..|.   +.++..+||+|+++++++.+.+..++||||
T Consensus         1 ~ig~g~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~   78 (278)
T cd05606           1 IIGRGGFGEVYGCRKA--DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL   78 (278)
T ss_pred             CcccCCCeEEEEEEEe--cCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEec
Confidence            4899999999999876  567799999886532   11122333443   344456899999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++++|.+++... ..+++..+..++.|+++||.|||+.   +|+||||||+||+++     .++.+||+|||++.....
T Consensus        79 ~~g~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~-----~~~~~kl~dfg~~~~~~~  149 (278)
T cd05606          79 MNGGDLHYHLSQH-GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLD-----EHGHVRISDLGLACDFSK  149 (278)
T ss_pred             CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEEC-----CCCCEEEccCcCccccCc
Confidence            9999999988543 5689999999999999999999998   999999999999998     778999999999876533


Q ss_pred             CCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      ...   ....|+..|+|||.+.+. .++.++||||+|+++|||++|+.||..........         .......    
T Consensus       150 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~---------~~~~~~~----  213 (278)
T cd05606         150 KKP---HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE---------IDRMTLT----  213 (278)
T ss_pred             cCC---cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH---------HHHHhhc----
Confidence            221   234688999999998754 68999999999999999999999997542211100         0000000    


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIHM  770 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~  770 (788)
                          ..+...  ......+.+++.+|++.+|++||     ++.+++++
T Consensus       214 ----~~~~~~--~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~  255 (278)
T cd05606         214 ----MAVELP--DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH  255 (278)
T ss_pred             ----cCCCCC--CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence                011111  11246788899999999999999     99999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.98  E-value=4.2e-32  Score=308.83  Aligned_cols=246  Identities=25%  Similarity=0.376  Sum_probs=184.0

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecC-------------
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE-------------  559 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-------------  559 (788)
                      ++||+||||.||+++.+  -+++.+|||++... .......+.+|+.++++|+|||||+++....+.             
T Consensus       485 ~lLGkGGFG~VvkVRNK--lDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~  562 (1351)
T KOG1035|consen  485 ELLGKGGFGSVVKVRNK--LDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASD  562 (1351)
T ss_pred             HHhcCCCCceEEEEeec--ccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccc
Confidence            68999999999999887  67789999999754 344556789999999999999999987642000             


Q ss_pred             --------------------------------------------------------------------------------
Q 047157          560 --------------------------------------------------------------------------------  559 (788)
Q Consensus       560 --------------------------------------------------------------------------------  559 (788)
                                                                                                      
T Consensus       563 ~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~  642 (1351)
T KOG1035|consen  563 SESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVIL  642 (1351)
T ss_pred             hhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCcccc
Confidence                                                                                            


Q ss_pred             --------------------------CeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceE
Q 047157          560 --------------------------DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII  613 (788)
Q Consensus       560 --------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~iv  613 (788)
                                                ..+||-||||+..+|.+++..+...-.....++++++|++||+|+|++   +||
T Consensus       643 d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~---giI  719 (1351)
T KOG1035|consen  643 DDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ---GII  719 (1351)
T ss_pred             CcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC---cee
Confidence                                      125789999999888888865533225677899999999999999999   999


Q ss_pred             ecCCCCCcEEeccCCCCCCCcEEEeecCCccccC-----------------CCCCcccccccCCccccCcccccCC---C
Q 047157          614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-----------------KDQTRTDTNMRGTMGYVAPEWLRNV---P  673 (788)
Q Consensus       614 H~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~-----------------~~~~~~~~~~~gt~~y~aPE~~~~~---~  673 (788)
                      ||||||.||+++     ++..|||+|||+|....                 .......+...||.-|+|||++.+.   +
T Consensus       720 HRDLKP~NIFLd-----~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~  794 (1351)
T KOG1035|consen  720 HRDLKPRNIFLD-----SRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNK  794 (1351)
T ss_pred             eccCCcceeEEc-----CCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccc
Confidence            999999999999     88899999999998721                 0111134557899999999999655   4


Q ss_pred             CCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHc
Q 047157          674 VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWC  753 (788)
Q Consensus       674 ~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~c  753 (788)
                      |+.|+|+|||||||+||+.   ||...-     ++.      .+...++.+.+...     .. ...+....=.+++.+|
T Consensus       795 Yn~KiDmYSLGIVlFEM~y---PF~TsM-----ERa------~iL~~LR~g~iP~~-----~~-f~~~~~~~e~slI~~L  854 (1351)
T KOG1035|consen  795 YNSKIDMYSLGIVLFEMLY---PFGTSM-----ERA------SILTNLRKGSIPEP-----AD-FFDPEHPEEASLIRWL  854 (1351)
T ss_pred             ccchhhhHHHHHHHHHHhc---cCCchH-----HHH------HHHHhcccCCCCCC-----cc-cccccchHHHHHHHHH
Confidence            9999999999999999985   454321     100      01111222222211     00 1122233445789999


Q ss_pred             cCCCCCCCCCHHHHHH
Q 047157          754 NHPDPNLRPSMKKVIH  769 (788)
Q Consensus       754 l~~dP~~RPt~~evl~  769 (788)
                      ++.||.+||||.|++.
T Consensus       855 l~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  855 LSHDPSKRPTATELLN  870 (1351)
T ss_pred             hcCCCccCCCHHHHhh
Confidence            9999999999999875

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.6e-32  Score=282.20  Aligned_cols=248  Identities=28%  Similarity=0.341  Sum_probs=201.8

Q ss_pred             ccccccccccceEEEEEEeccCcceeeeeeecccchH---HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       492 ~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .-++||+|+||.||-++.+  .+++.+|.|++.+...   +.....++|-.+|.+++.+.||.+--.|+..+.+++|+..
T Consensus       189 ~~RvlGkGGFGEV~acqvr--aTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtl  266 (591)
T KOG0986|consen  189 VYRVLGKGGFGEVCACQVR--ATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTL  266 (591)
T ss_pred             eeEEEecccccceeEEEEe--cchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEe
Confidence            3479999999999999887  8888999999976542   3345678999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          569 MPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       569 ~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |.||+|.-+|.+.+ ..+++....-++.+|+-||.+||..   .||.|||||+|||+|     +.++++|+|+|+|..+.
T Consensus       267 MNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLD-----d~GhvRISDLGLAvei~  338 (591)
T KOG0986|consen  267 MNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLD-----DHGHVRISDLGLAVEIP  338 (591)
T ss_pred             ecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeec-----cCCCeEeeccceEEecC
Confidence            99999999997764 4678888999999999999999999   999999999999999     99999999999999876


Q ss_pred             CCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      ......  ..+||.+|||||++.+..|+...|.||+||+||||+.|+.||.........++.+                 
T Consensus       339 ~g~~~~--~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvd-----------------  399 (591)
T KOG0986|consen  339 EGKPIR--GRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVD-----------------  399 (591)
T ss_pred             CCCccc--cccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHH-----------------
Confidence            554432  3489999999999999999999999999999999999999998653322211111                 


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIH  769 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~  769 (788)
                      ..+..++. ..+....+++..+....|+.||++|.     .+.+|.+
T Consensus       400 rr~~~~~~-ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~  445 (591)
T KOG0986|consen  400 RRTLEDPE-EYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKE  445 (591)
T ss_pred             HHHhcchh-hcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhh
Confidence            11111111 11234456667777788999999996     4456654

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.97  E-value=2.4e-32  Score=296.55  Aligned_cols=201  Identities=28%  Similarity=0.436  Sum_probs=173.4

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCC------eEEEE
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED------KRLLV  565 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------~~~lV  565 (788)
                      .+.||+|+||.||+|+++  .++..||||.+.... ....+...+|+++|++++|||||+++++-++..      ...+|
T Consensus        18 ~e~LG~Ga~g~V~rgrnk--etG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv   95 (732)
T KOG4250|consen   18 DERLGKGAFGNVYRGRNK--ETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV   95 (732)
T ss_pred             hhhhcCCccceeeeeccc--ccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence            578999999999999887  788999999987643 334567889999999999999999999865543      56899


Q ss_pred             EecCCCCCHhHhhhcc--CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          566 YELMPNGTLSNFLFHE--GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      ||||.+|+|+..|.+.  ...+++.+.+.++.++..||.|||++   +|+||||||.||++-... +.....||+|||.|
T Consensus        96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Ge-dgq~IyKLtDfG~A  171 (732)
T KOG4250|consen   96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGE-DGQSIYKLTDFGAA  171 (732)
T ss_pred             EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecC-CCceEEeeeccccc
Confidence            9999999999999754  34689999999999999999999999   999999999999995332 13456899999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccc
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSR  701 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~  701 (788)
                      +.+..+.  ......||..|.+||.+.. +.|+..+|.|||||++|+.+||..||....
T Consensus       172 rel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~  228 (732)
T KOG4250|consen  172 RELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG  228 (732)
T ss_pred             ccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence            9886655  5566899999999999984 889999999999999999999999997653

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.97  E-value=2.2e-31  Score=282.95  Aligned_cols=254  Identities=25%  Similarity=0.284  Sum_probs=195.4

Q ss_pred             hcccccccccccceEEEEEEec-cCcceeeeeeecccch----HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRL-KDTQIEIAVKKLEKDI----EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~  563 (788)
                      |.+.+.||+|+||.||++.... ..++..||+|.+....    ....+.+.+|++++.++ +|+||+++++.+..+...+
T Consensus         2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (290)
T cd05613           2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH   81 (290)
T ss_pred             ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence            4567899999999999998742 1356789999986532    22346788999999999 5999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +|+||+++++|.+++... ..+++..+..++.||+.||.|||+.   +++||||+|+|||++     .++.+||+|||++
T Consensus        82 lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~-----~~~~~kl~dfg~~  152 (290)
T cd05613          82 LILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLD-----SNGHVVLTDFGLS  152 (290)
T ss_pred             EEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEC-----CCCCEEEeeCccc
Confidence            999999999999999654 4578888899999999999999998   999999999999998     7789999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCC--CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNV--PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      ...............++..|+|||.+...  .++.++||||||+++|+|++|+.||........       .........
T Consensus       153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-------~~~~~~~~~  225 (290)
T cd05613         153 KEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS-------QAEISRRIL  225 (290)
T ss_pred             eecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcccc-------HHHHHHHhh
Confidence            87644333333345688899999998653  467899999999999999999999864321110       011111110


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIHM  770 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~  770 (788)
                      .         ..+..  .......+.+++.+||+.||++||     ++++++.+
T Consensus       226 ~---------~~~~~--~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~  268 (290)
T cd05613         226 K---------SEPPY--PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH  268 (290)
T ss_pred             c---------cCCCC--CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence            0         00000  111345677899999999999997     77777664

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.97  E-value=2.9e-31  Score=278.37  Aligned_cols=240  Identities=20%  Similarity=0.233  Sum_probs=183.7

Q ss_pred             ccccc--ccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEEe
Q 047157          491 GFSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       491 ~~~~~--lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .+.+.  ||+|+||.||++..+  .++..+++|.+........     |+.....+ +||||+++++.+...+..++|||
T Consensus        17 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e   89 (267)
T PHA03390         17 EIVKKLKLIDGKFGKVSVLKHK--PTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMD   89 (267)
T ss_pred             ccccceeecCCCceEEEEEEEc--CCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEE
Confidence            34444  599999999999876  5677899998864321111     22222212 79999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCC-cEEEeecCCcccc
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNY-MAKISDFGISKLL  646 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~-~~kL~Dfg~a~~~  646 (788)
                      |+++++|.+++... ..+++.++..++.||++||.|||+.   +++||||||+||+++     .++ .++|+|||++...
T Consensus        90 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~-----~~~~~~~l~dfg~~~~~  160 (267)
T PHA03390         90 YIKDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYD-----RAKDRIYLCDYGLCKII  160 (267)
T ss_pred             cCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEe-----CCCCeEEEecCccceec
Confidence            99999999999655 3789999999999999999999999   999999999999998     555 8999999998765


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      ....     ...++..|+|||.+.+..++.++||||||+++|||++|+.||.......      .....+....  .   
T Consensus       161 ~~~~-----~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~--~---  224 (267)
T PHA03390        161 GTPS-----CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE------LDLESLLKRQ--Q---  224 (267)
T ss_pred             CCCc-----cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch------hhHHHHHHhh--c---
Confidence            4322     2357889999999999899999999999999999999999997432211      1111111100  0   


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC-HHHHHH
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS-MKKVIH  769 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-~~evl~  769 (788)
                           ....  ........+.+++.+||+.||.+||+ ++|+++
T Consensus       225 -----~~~~--~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        225 -----KKLP--FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             -----ccCC--cccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence                 0000  01134567888999999999999996 588874

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.97  E-value=6.8e-32  Score=284.93  Aligned_cols=247  Identities=26%  Similarity=0.350  Sum_probs=199.4

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCC-ccccceEeeEEecCCeEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lV  565 (788)
                      |.+.+.||+|+||.||++...  .++..+++|.+....   ....+.+.+|++++++++ ||||+++++++.+.+..++|
T Consensus         3 y~~~~~lg~g~~~~vy~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           3 FKFGKIIGEGSFSTVVLAKEK--ETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             ceEeeeecCCCceEEEEEEEc--CCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            566789999999999999886  567789999886532   334567889999999998 99999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||++++++|.+++.+. ..+++..+..++.|++.||.|||+.   +++|+||+|+||+++     .++.++|+|||++..
T Consensus        81 ~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~-----~~~~~~l~df~~~~~  151 (280)
T cd05581          81 LEYAPNGELLQYIRKY-GSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLD-----KDMHIKITDFGTAKV  151 (280)
T ss_pred             EcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEEC-----CCCCEEecCCccccc
Confidence            9999999999999655 4689999999999999999999998   999999999999998     788999999999987


Q ss_pred             cCCCCC-------------------cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCcccccccc
Q 047157          646 LNKDQT-------------------RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEES  706 (788)
Q Consensus       646 ~~~~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~  706 (788)
                      ......                   .......++..|+|||.+....++.++||||||++++++++|+.||.......  
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--  229 (280)
T cd05581         152 LDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL--  229 (280)
T ss_pred             cCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH--
Confidence            644322                   12223457889999999988889999999999999999999999997553111  


Q ss_pred             ccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCH----HHHHH
Q 047157          707 EEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSM----KKVIH  769 (788)
Q Consensus       707 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~----~evl~  769 (788)
                           ..     ......          .........+.+.+++.+||+.+|++||++    +++++
T Consensus       230 -----~~-----~~~~~~----------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         230 -----TF-----QKILKL----------EYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             -----HH-----HHHHhc----------CCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence                 00     000000          000111225678899999999999999999    77764

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.97  E-value=7.8e-32  Score=289.27  Aligned_cols=269  Identities=23%  Similarity=0.237  Sum_probs=192.8

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchH--HHHHHHHHHHHHhcCCCccccceEeeEEecCC-----
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE--KTNEEFMTELKIIGRTHHKNLVRLLGFCSEED-----  560 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----  560 (788)
                      ..|.+.+.||+|+||.||+|...  .++..+++|.+.....  .....+.+|++++++++||||+++++++.+..     
T Consensus         8 ~~y~~~~~lg~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   85 (311)
T cd07866           8 RDYEILGKLGEGTFGEVYKARQI--KTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR   85 (311)
T ss_pred             ccEEEEEEeccCCCEEEEEEEEC--CCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence            34667789999999999999876  5667899998864322  22346678999999999999999999875433     


Q ss_pred             ---eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          561 ---KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       561 ---~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                         ..++|+||+.+ +|...+......+++..+..++.||++||.|||++   +|+|+||||+||+++     .++.+||
T Consensus        86 ~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~-----~~~~~~l  156 (311)
T cd07866          86 KRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILID-----NQGILKI  156 (311)
T ss_pred             cCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC-----CCCCEEE
Confidence               46999999864 77777766666789999999999999999999999   999999999999998     7889999


Q ss_pred             eecCCccccCCCCCc----------ccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCcccccccc
Q 047157          638 SDFGISKLLNKDQTR----------TDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEES  706 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~  706 (788)
                      +|||++.........          ......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||.........
T Consensus       157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~  236 (311)
T cd07866         157 ADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQL  236 (311)
T ss_pred             CcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            999999865432211          1122356788999998765 45889999999999999999999999754332111


Q ss_pred             ccchhh---hHHHHHHHhhccccccccc--CCCCCccc-----HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          707 EEVDIV---LSDWVISCMLSRNLQVLVS--HDPEVLSD-----LERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       707 ~~~~~~---~~~~~~~~~~~~~~~~l~~--~~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ......   .....+...  ..+.....  ........     ....+.+.+++.+||+.||++|||+.|++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         237 HLIFKLCGTPTEETWPGW--RSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             HHHHHHhCCCChhhchhh--hhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            100000   000000000  00000000  00000000     112256889999999999999999999875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.97  E-value=1.2e-31  Score=291.22  Aligned_cols=260  Identities=23%  Similarity=0.253  Sum_probs=192.7

Q ss_pred             ccccccccccceEEEEEEeccCcceeeeeeecccchHHH--------------HHHHHHHHHHhcCCCccccceEeeEEe
Q 047157          492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT--------------NEEFMTELKIIGRTHHKNLVRLLGFCS  557 (788)
Q Consensus       492 ~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~--------------~~~~~~E~~~l~~l~hpniv~~~~~~~  557 (788)
                      +.+.||+|+||+||+|...  ..+..||||.+.......              ...+.+|++++++++||||+++++++.
T Consensus        13 ~~~~ig~G~~g~vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   90 (335)
T PTZ00024         13 KGAHLGEGTYGKVEKAYDT--LTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYV   90 (335)
T ss_pred             hhhcccCCCceeEEEEEEC--CCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEe
Confidence            3467999999999999876  567789999886432211              125789999999999999999999999


Q ss_pred             cCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          558 EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       558 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                      .++..++||||++ ++|.+++... ..+++.....++.|++.||.|||+.   +|+|+||+|+||+++     .++.+||
T Consensus        91 ~~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~-----~~~~~kl  160 (335)
T PTZ00024         91 EGDFINLVMDIMA-SDLKKVVDRK-IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFIN-----SKGICKI  160 (335)
T ss_pred             cCCcEEEEEeccc-cCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEEC-----CCCCEEE
Confidence            9999999999996 6899888543 5688899999999999999999998   999999999999998     7789999


Q ss_pred             eecCCccccCCCC-------------CcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccc
Q 047157          638 SDFGISKLLNKDQ-------------TRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVE  703 (788)
Q Consensus       638 ~Dfg~a~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~  703 (788)
                      +|||++.......             ........++..|+|||.+.+. .++.++||||||+++|||++|+.||......
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~  240 (335)
T PTZ00024        161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI  240 (335)
T ss_pred             CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            9999997654111             1111223467889999998764 4689999999999999999999999755322


Q ss_pred             cccccchhhhHHHHHHHhhccc---cc---------ccccCCCCCcc--cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          704 EESEEVDIVLSDWVISCMLSRN---LQ---------VLVSHDPEVLS--DLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       704 ~~~~~~~~~~~~~~~~~~~~~~---~~---------~l~~~~~~~~~--~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      +...        .+........   ..         ......+....  .......+.+++..||+.+|++|||++|++.
T Consensus       241 ~~~~--------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        241 DQLG--------RIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             HHHH--------HHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence            1110        0100000000   00         00000000000  0112456889999999999999999999997


Q ss_pred             Hh
Q 047157          770 ML  771 (788)
Q Consensus       770 ~L  771 (788)
                      +-
T Consensus       313 ~~  314 (335)
T PTZ00024        313 HE  314 (335)
T ss_pred             Cc
Confidence            43

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.97  E-value=2e-33  Score=270.57  Aligned_cols=258  Identities=26%  Similarity=0.334  Sum_probs=199.3

Q ss_pred             CcccCHHHHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEee
Q 047157          477 FREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLG  554 (788)
Q Consensus       477 ~~~~~~~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~  554 (788)
                      ...|+-++|+..     ..||.|+||+|++-.++  ..++..|||+++... ...+++++.|.+...+- +.||||+++|
T Consensus        58 ~~~F~~~~Lqdl-----g~iG~G~fG~V~KM~hk--~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyG  130 (361)
T KOG1006|consen   58 LHTFTSDNLQDL-----GEIGNGAFGTVNKMLHK--PSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYG  130 (361)
T ss_pred             ccccccchHHHH-----HHhcCCcchhhhhhhcC--ccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhh
Confidence            455666665543     57999999999998887  788899999998655 36677889999866554 7999999999


Q ss_pred             EEecCCeEEEEEecCCCCCHhHhhh----ccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCC
Q 047157          555 FCSEEDKRLLVYELMPNGTLSNFLF----HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD  630 (788)
Q Consensus       555 ~~~~~~~~~lV~e~~~~gsL~~~l~----~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~  630 (788)
                      .+..++..++-||.| ..||+.+-.    -....+++...-.|....++||.||.+.  ..|||||+||+|||++     
T Consensus       131 a~F~EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILld-----  202 (361)
T KOG1006|consen  131 ALFSEGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLD-----  202 (361)
T ss_pred             hhhcCCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEe-----
Confidence            999999999999999 457765542    1345678888888999999999999976  5899999999999999     


Q ss_pred             CCCcEEEeecCCccccCCCCCcccccccCCccccCccccc--CCCCCccCcchhhHHHHHHHHhCCCCCCcccccccccc
Q 047157          631 TNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR--NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEE  708 (788)
Q Consensus       631 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~  708 (788)
                      ..+.+||+|||++-.+....  ..+.-.|...|||||.+.  +..|+-++||||||++|||+.||+.|+...+..-    
T Consensus       203 r~G~vKLCDFGIcGqLv~Si--AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svf----  276 (361)
T KOG1006|consen  203 RHGDVKLCDFGICGQLVDSI--AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVF----  276 (361)
T ss_pred             cCCCEeeecccchHhHHHHH--HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHH----
Confidence            88899999999997664322  233446888999999984  3358899999999999999999999997653210    


Q ss_pred             chhhhHHHHHHHhhcccccccccCCCCCccc---HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          709 VDIVLSDWVISCMLSRNLQVLVSHDPEVLSD---LERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       709 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                           .+ + .....++       .|....+   .+....+..++..|+-.|..+||...++++
T Consensus       277 -----eq-l-~~Vv~gd-------pp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  277 -----EQ-L-CQVVIGD-------PPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             -----HH-H-HHHHcCC-------CCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence                 00 0 0111121       2222222   346678889999999999999999998765

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.6e-32  Score=308.06  Aligned_cols=257  Identities=24%  Similarity=0.236  Sum_probs=210.9

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCe
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDK  561 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  561 (788)
                      +....+.+.++||+|+||.|..++++  .++..+|+|++.+..   ......|..|-.+|..-+.+-|++++-.|+++++
T Consensus        72 l~~~DfeilKvIGrGaFGEV~lVr~k--~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~  149 (1317)
T KOG0612|consen   72 LKAEDFEILKVIGRGAFGEVALVRHK--STEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERY  149 (1317)
T ss_pred             CCHHhhHHHHHhcccccceeEEEEee--ccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccc
Confidence            34456677899999999999999887  788899999998632   3344678899999998899999999999999999


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      +|+|||||+||+|-.++.+.. ++++..+.-++..|..||.-||+.   |+|||||||+|||||     ..|++||+|||
T Consensus       150 LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld-----~~GHikLADFG  220 (1317)
T KOG0612|consen  150 LYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLD-----KSGHIKLADFG  220 (1317)
T ss_pred             eEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEec-----ccCcEeeccch
Confidence            999999999999999997776 788888888999999999999999   999999999999999     89999999999


Q ss_pred             CccccCCCCCcccccccCCccccCccccc----C-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHH
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLR----N-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDW  716 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~  716 (788)
                      .+..+..++.-.....+|||.|++||++.    + +.|.+.+|.||+||++|||+.|..||...+..+....+       
T Consensus       221 sClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KI-------  293 (1317)
T KOG0612|consen  221 SCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKI-------  293 (1317)
T ss_pred             hHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHH-------
Confidence            99999888777777789999999999984    3 57899999999999999999999999865433322111       


Q ss_pred             HHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC---HHHHHHHh
Q 047157          717 VISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS---MKKVIHML  771 (788)
Q Consensus       717 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt---~~evl~~L  771 (788)
                          +..   ...    ...+.+...+++..+||...+. +|+.|-.   ++++..+-
T Consensus       294 ----m~h---k~~----l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~Hp  339 (1317)
T KOG0612|consen  294 ----MNH---KES----LSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHP  339 (1317)
T ss_pred             ----hch---hhh----cCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCc
Confidence                111   111    1112233456677777777764 7889988   88888653

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-31  Score=309.21  Aligned_cols=262  Identities=24%  Similarity=0.390  Sum_probs=208.4

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccC-----cceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEe
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKD-----TQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCS  557 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~-----~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~  557 (788)
                      +....-.+.+.||+|.||.|++|......     ....||||.++... ....+.+..|+++|+.+ +|+||+.++|+|.
T Consensus       293 ~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t  372 (609)
T KOG0200|consen  293 IPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACT  372 (609)
T ss_pred             echhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeec
Confidence            33344456679999999999999866322     25689999997543 34567899999999998 6999999999999


Q ss_pred             cCCeEEEEEecCCCCCHhHhhhccC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcE
Q 047157          558 EEDKRLLVYELMPNGTLSNFLFHEG---------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNV  622 (788)
Q Consensus       558 ~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  622 (788)
                      .++..++|+||+..|+|.++|++++               ..+.....+.++.|||.|++||++.   ++|||||..+||
T Consensus       373 ~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNV  449 (609)
T KOG0200|consen  373 QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNV  449 (609)
T ss_pred             cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhE
Confidence            9999999999999999999998776               3478889999999999999999999   999999999999


Q ss_pred             EeccCCCCCCCcEEEeecCCccccCCCCCccccccc--CCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCc
Q 047157          623 LLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR--GTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIEL  699 (788)
Q Consensus       623 ll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~  699 (788)
                      |+.     .+..+||+|||+++..............  -...|||||.+....|+.|+|||||||+||||++ |..|+..
T Consensus       450 Li~-----~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~  524 (609)
T KOG0200|consen  450 LIT-----KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPG  524 (609)
T ss_pred             Eec-----CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCC
Confidence            998     8889999999999976554444322222  2456999999999999999999999999999997 6678765


Q ss_pred             cccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          700 SRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      ....          .+ +...+.++         -....+....+++.++++.||+.+|++||+..|+++.|+..
T Consensus       525 ~~~~----------~~-l~~~l~~G---------~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  525 IPPT----------EE-LLEFLKEG---------NRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             CCcH----------HH-HHHHHhcC---------CCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence            2100          01 11122222         12222333466788999999999999999999999999874

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.97  E-value=1.9e-31  Score=278.66  Aligned_cols=248  Identities=24%  Similarity=0.323  Sum_probs=191.0

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccc-----hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-----IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      |.+.+.||+|+||.||++....  ....+++|.++..     ......++..|+.++++++||||+++++++.+....++
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   79 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKK--AVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCI   79 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecC--CCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEE
Confidence            5667899999999999998763  2333444443321     12233467789999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          565 VYELMPNGTLSNFLFH---EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      |+||+++++|.+++..   ....+++..++.++.|++.||.|||+.   +++|+||+|+||+++     . ..+||+|||
T Consensus        80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~-----~-~~~~l~d~g  150 (260)
T cd08222          80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLK-----N-NLLKIGDFG  150 (260)
T ss_pred             EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEee-----c-CCEeecccC
Confidence            9999999999998854   345689999999999999999999998   999999999999996     3 469999999


Q ss_pred             CccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      .+........ ......++..|+|||.+.+..++.++|+||||+++|+|++|..||.......           .. ...
T Consensus       151 ~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~-----------~~-~~~  217 (260)
T cd08222         151 VSRLLMGSCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS-----------VV-LRI  217 (260)
T ss_pred             ceeecCCCcc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH-----------HH-HHH
Confidence            9876543222 2223457889999999988889999999999999999999999986432111           00 001


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ..+..       +.  .+......+.+++.+||+.||++||++.|+++.
T Consensus       218 ~~~~~-------~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         218 VEGPT-------PS--LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             HcCCC-------CC--CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence            11110       11  122345678889999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.97  E-value=2e-32  Score=284.98  Aligned_cols=247  Identities=26%  Similarity=0.352  Sum_probs=199.3

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPN  571 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~  571 (788)
                      ++||+|.||+||-|+++  .+++.||||.+.+..  .+....+++|+.+|++++||.||.+.-.|+..+..++|||-+.|
T Consensus       570 evLGSGQFG~VYgg~hR--ktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G  647 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHR--KTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG  647 (888)
T ss_pred             hhccCCcceeeecceec--ccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence            78999999999999998  788899999997643  44567899999999999999999999999999999999999966


Q ss_pred             CCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCC
Q 047157          572 GTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT  651 (788)
Q Consensus       572 gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~  651 (788)
                      .=|+-.|..+..++++..-.-++.||+.||.|||.+   +|+|+||||+|||+....  .-.++||+|||+|+++.....
T Consensus       648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~--~FPQvKlCDFGfARiIgEksF  722 (888)
T KOG4236|consen  648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASAS--PFPQVKLCDFGFARIIGEKSF  722 (888)
T ss_pred             hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCC--CCCceeeccccceeecchhhh
Confidence            666666667778888888888999999999999999   999999999999997443  567899999999999875443


Q ss_pred             cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccccc
Q 047157          652 RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVS  731 (788)
Q Consensus       652 ~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  731 (788)
                      .  ...+||+.|+|||+++++.|...-|+||.|||+|--+.|..||.......  ..            +..    .-+.
T Consensus       723 R--rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn--dQ------------IQN----AaFM  782 (888)
T KOG4236|consen  723 R--RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN--DQ------------IQN----AAFM  782 (888)
T ss_pred             h--hhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchh--HH------------hhc----cccc
Confidence            3  34689999999999999999999999999999999999999996431110  00            000    0000


Q ss_pred             CCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          732 HDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       732 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ..+...  .+.....+++|...||..-.+|.|...-+.
T Consensus       783 yPp~PW--~eis~~AidlIn~LLqVkm~kRysvdk~ls  818 (888)
T KOG4236|consen  783 YPPNPW--SEISPEAIDLINNLLQVKMRKRYSVDKSLS  818 (888)
T ss_pred             cCCCch--hhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence            111111  133456778888888888888888876554

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.97  E-value=2.5e-31  Score=289.34  Aligned_cols=269  Identities=20%  Similarity=0.248  Sum_probs=192.6

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecC--------
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE--------  559 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--------  559 (788)
                      ..|.+.+.||.|+||.||+|...  .++..|++|.+........+.+.+|++++++++||||+++++++...        
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~--~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDS--DCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV   82 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEEC--CCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence            34667789999999999999886  66779999988765555667888999999999999999999876543        


Q ss_pred             ------CeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCC
Q 047157          560 ------DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNY  633 (788)
Q Consensus       560 ------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~  633 (788)
                            ...++|+||++ ++|.+++..  ..+++..+..++.||+.||.|||+.   +|+||||||+||+++.    .+.
T Consensus        83 ~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~----~~~  152 (342)
T cd07854          83 GSLTELNSVYIVQEYME-TDLANVLEQ--GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINT----EDL  152 (342)
T ss_pred             ccccccceEEEEeeccc-ccHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcC----CCc
Confidence                  35789999997 589888743  3578899999999999999999998   9999999999999972    456


Q ss_pred             cEEEeecCCccccCCCCCc--ccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccch
Q 047157          634 MAKISDFGISKLLNKDQTR--TDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVD  710 (788)
Q Consensus       634 ~~kL~Dfg~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~  710 (788)
                      .+||+|||.+..+......  ......++..|+|||.+.. ..++.++||||||+++|||++|+.||......+......
T Consensus       153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~  232 (342)
T cd07854         153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL  232 (342)
T ss_pred             eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            7899999999765432211  1122356888999997644 568889999999999999999999997543221110000


Q ss_pred             h----hhHHHHHHHhhcccccccccCCCCCccc-----HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          711 I----VLSDWVISCMLSRNLQVLVSHDPEVLSD-----LERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       711 ~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .    .... .......................     .....++.+++.+||+.||++|||++|+++
T Consensus       233 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         233 ESVPVVREE-DRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             HhcCCCChH-HhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence            0    0000 00000000000000000000000     112356788999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.97  E-value=7.6e-31  Score=285.57  Aligned_cols=268  Identities=23%  Similarity=0.293  Sum_probs=194.8

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCC------
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED------  560 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------  560 (788)
                      .|.+.+.||+|+||.||++...  .++..||||++...  .....+.+.+|++++++++||||+++++++..+.      
T Consensus        16 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07880          16 RYRDLKQVGSGAYGTVCSALDR--RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFH   93 (343)
T ss_pred             ceEEEEEeeecCCeEEEEEEEC--CCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccc
Confidence            4556789999999999999876  56778999988542  2334457889999999999999999999987654      


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ..++||||+ +++|.+++..  ..+++..+..++.||++||.|||+.   +|+||||||+||+++     .++.+||+||
T Consensus        94 ~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~-----~~~~~kl~df  162 (343)
T cd07880          94 DFYLVMPFM-GTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVN-----EDCELKILDF  162 (343)
T ss_pred             eEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEc-----CCCCEEEeec
Confidence            458999998 7799888753  4688999999999999999999998   999999999999998     7789999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccch----hhhHH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVD----IVLSD  715 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~----~~~~~  715 (788)
                      |++.......    ....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.............    .....
T Consensus       163 g~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  238 (343)
T cd07880         163 GLARQTDSEM----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKE  238 (343)
T ss_pred             ccccccccCc----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence            9998654321    23456889999998865 458899999999999999999999997543211100000    00000


Q ss_pred             HHHHHhhcccccccccCCCCCcc------cHHHHHHHHHHHhHccCCCCCCCCCHHHHH--HHhhcC
Q 047157          716 WVISCMLSRNLQVLVSHDPEVLS------DLERFERMAMVGLWCNHPDPNLRPSMKKVI--HMLEGT  774 (788)
Q Consensus       716 ~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~~l~~l~~~cl~~dP~~RPt~~evl--~~L~~~  774 (788)
                      + ................+....      .......+.+++.+|++.||++|||+.+++  ..++..
T Consensus       239 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~  304 (343)
T cd07880         239 F-VQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF  304 (343)
T ss_pred             H-HHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence            0 000000000111100000000      012234578999999999999999999999  344443

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.97  E-value=5.5e-31  Score=273.15  Aligned_cols=237  Identities=30%  Similarity=0.324  Sum_probs=191.2

Q ss_pred             ccccccceEEEEEEeccCcceeeeeeecccchH---HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCC
Q 047157          496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       496 lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      ||+|+||.||++...  ..+..+++|.+.....   .....+..|++++++++||||+++++.+..++..++||||++++
T Consensus         1 lg~G~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~   78 (250)
T cd05123           1 LGKGSFGKVLLVRKK--DTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGG   78 (250)
T ss_pred             CCCCCceEEEEEEEC--CCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCC
Confidence            689999999999886  5567899998865432   24568899999999999999999999999999999999999999


Q ss_pred             CHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCc
Q 047157          573 TLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR  652 (788)
Q Consensus       573 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~  652 (788)
                      +|.+++... ..+++..+..++.|++.||.|||+.   +++|+||+|+||+++     .++.++|+|||++....... .
T Consensus        79 ~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~-----~~~~~~l~d~~~~~~~~~~~-~  148 (250)
T cd05123          79 ELFSHLSKE-GRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLD-----ADGHIKLTDFGLAKELSSEG-S  148 (250)
T ss_pred             cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEc-----CCCcEEEeecCcceecccCC-C
Confidence            999999655 3678999999999999999999998   999999999999998     77899999999998764432 1


Q ss_pred             ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccC
Q 047157          653 TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSH  732 (788)
Q Consensus       653 ~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  732 (788)
                      ......++..|+|||...+...+.++|+||||+++|+|++|+.||.......        ..    ......        
T Consensus       149 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~--------~~----~~~~~~--------  208 (250)
T cd05123         149 RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE--------IY----EKILKD--------  208 (250)
T ss_pred             cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--------HH----HHHhcC--------
Confidence            2233567889999999988889999999999999999999999996542211        00    001110        


Q ss_pred             CCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHH
Q 047157          733 DPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKK  766 (788)
Q Consensus       733 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e  766 (788)
                      ...  .+......+.+++.+||..||++||++.+
T Consensus       209 ~~~--~~~~~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         209 PLR--FPEFLSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             CCC--CCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence            011  11111466788999999999999999954

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.97  E-value=6.9e-32  Score=273.42  Aligned_cols=281  Identities=19%  Similarity=0.263  Sum_probs=211.0

Q ss_pred             ccCHHHHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC-c-c----ccceE
Q 047157          479 EFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-H-K----NLVRL  552 (788)
Q Consensus       479 ~~~~~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h-p----niv~~  552 (788)
                      .+...+.....|.+...+|+|.||.|-++.+.  ..+..||||+++.. ....+..+-|+++++++. + |    -+|++
T Consensus        80 v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~--~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m  156 (415)
T KOG0671|consen   80 VYQVGDILTNRYEIVDLLGEGTFGKVVECWDR--ETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQM  156 (415)
T ss_pred             EEEeccccccceehhhhhcCCcccceEEEeec--CCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEee
Confidence            34555666777888899999999999999887  44779999999764 556677788999999994 2 2    27888


Q ss_pred             eeEEecCCeEEEEEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCC---
Q 047157          553 LGFCSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKT---  628 (788)
Q Consensus       553 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~---  628 (788)
                      .++|+-.++.+||+|.+ |-|+.++|..+ -..++...+..|+.|++++++|||+.   +++|-||||+|||+....   
T Consensus       157 ~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~  232 (415)
T KOG0671|consen  157 RDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFK  232 (415)
T ss_pred             ehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEE
Confidence            89999999999999998 77999999764 34678999999999999999999999   999999999999994211   


Q ss_pred             ------------CCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCC
Q 047157          629 ------------LDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRH  696 (788)
Q Consensus       629 ------------~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p  696 (788)
                                  ...+..+||+|||.|.......    ...+.|..|.|||++.+-.++.++||||+||||.|+.+|...
T Consensus       233 ~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~L  308 (415)
T KOG0671|consen  233 TYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETL  308 (415)
T ss_pred             EeccCCccceeccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeecccee
Confidence                        1235679999999998754443    345779999999999999999999999999999999999999


Q ss_pred             CCccccccccccchhhhHHHHHHHh---------hccccc-----------ccccCC-C---CCcccHHHHHHHHHHHhH
Q 047157          697 IELSRVEEESEEVDIVLSDWVISCM---------LSRNLQ-----------VLVSHD-P---EVLSDLERFERMAMVGLW  752 (788)
Q Consensus       697 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-----------~l~~~~-~---~~~~~~~~~~~l~~l~~~  752 (788)
                      |...+..+.....+..+.......+         ..+.+.           ...+.. +   .......+..+|++|+..
T Consensus       309 FqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~  388 (415)
T KOG0671|consen  309 FQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRR  388 (415)
T ss_pred             cccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHH
Confidence            9876533321111111111100000         001111           000000 0   011233556789999999


Q ss_pred             ccCCCCCCCCCHHHHHHH
Q 047157          753 CNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       753 cl~~dP~~RPt~~evl~~  770 (788)
                      ||..||.+|+|+.|++++
T Consensus       389 mL~fDP~~RiTl~EAL~H  406 (415)
T KOG0671|consen  389 MLEFDPARRITLREALSH  406 (415)
T ss_pred             HHccCccccccHHHHhcC
Confidence            999999999999999863

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.97  E-value=1.7e-30  Score=281.77  Aligned_cols=269  Identities=22%  Similarity=0.254  Sum_probs=191.5

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCC-CccccceEeeEEec----CCeE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSE----EDKR  562 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~----~~~~  562 (788)
                      |.+.+.||+|+||.||++.......+..+|+|.+....  ....+.+.+|+++++++ +||||+++++.+..    ....
T Consensus         2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~   81 (332)
T cd07857           2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL   81 (332)
T ss_pred             ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence            45678999999999999998743337789999886432  23356788999999999 59999999987543    2457


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++++|++. ++|.+++.. ...+++..+..++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||+
T Consensus        82 ~~~~e~~~-~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~-----~~~~~kl~Dfg~  151 (332)
T cd07857          82 YLYEELME-ADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVN-----ADCELKICDFGL  151 (332)
T ss_pred             EEEEeccc-CCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEc-----CCCCEEeCcCCC
Confidence            88899885 689888854 35688999999999999999999999   999999999999998     778999999999


Q ss_pred             ccccCCCCCc---ccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh----H
Q 047157          643 SKLLNKDQTR---TDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL----S  714 (788)
Q Consensus       643 a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~----~  714 (788)
                      +.........   ......|+..|+|||.+.+ ..++.++||||+|+++|+|++|+.||...............+    .
T Consensus       152 a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  231 (332)
T cd07857         152 ARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDE  231 (332)
T ss_pred             ceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCH
Confidence            9865432211   1223468899999998765 568999999999999999999999997643221110000000    0


Q ss_pred             HHHHHHhhccccccccc---CCCCCc---ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          715 DWVISCMLSRNLQVLVS---HDPEVL---SDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       715 ~~~~~~~~~~~~~~l~~---~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      +. ..............   ..+...   ........+.+++.+||+.||++|||+.|++.
T Consensus       232 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         232 ET-LSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             HH-HHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            00 00000000000000   000000   00012356888999999999999999999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.97  E-value=4.9e-31  Score=287.11  Aligned_cols=264  Identities=23%  Similarity=0.304  Sum_probs=194.1

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCe-----
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDK-----  561 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~-----  561 (788)
                      .|.+.+.||+|++|.||+|...  .++..|++|.+...  .....+.+.+|+.++++++||||+++++++...+.     
T Consensus        16 ~y~~~~~ig~g~~g~vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07851          16 RYQNLSPVGSGAYGQVCSAFDT--KTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ   93 (343)
T ss_pred             ceEEEEEeccCCceEEEEEEEC--CCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence            3556789999999999999886  56778999988643  23344677889999999999999999998866554     


Q ss_pred             -EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          562 -RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       562 -~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                       .++|+||+ +++|.+++..  ..+++..+..++.||++||.|||+.   +|+|+||||+||+++     .++.+||+||
T Consensus        94 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~-----~~~~~kL~df  162 (343)
T cd07851          94 DVYLVTHLM-GADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVN-----EDCELKILDF  162 (343)
T ss_pred             cEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEC-----CCCCEEEccc
Confidence             89999998 6799998854  4689999999999999999999998   999999999999998     7789999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh---hHHH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV---LSDW  716 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~---~~~~  716 (788)
                      |++......    .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...............   ..+-
T Consensus       163 g~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~  238 (343)
T cd07851         163 GLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEE  238 (343)
T ss_pred             ccccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH
Confidence            999865432    223457888999998865 46789999999999999999999999754322111000000   0000


Q ss_pred             HHHHhhcccccccccCCCCCc-cc-----HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          717 VISCMLSRNLQVLVSHDPEVL-SD-----LERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       717 ~~~~~~~~~~~~l~~~~~~~~-~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ............++...+... ..     ......+.+++.+||+.||++|||+.||++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         239 LLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             HHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence            000000000011110000000 00     012467889999999999999999999986

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.97  E-value=1.6e-30  Score=281.17  Aligned_cols=264  Identities=22%  Similarity=0.238  Sum_probs=192.0

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEec-CCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSE-EDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lV  565 (788)
                      .|.+.+.||+|+||.||++...  .++..|++|++....  ....+.+.+|++++++++||||+++++++.. ....++|
T Consensus        11 ~y~~~~~ig~g~~g~v~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv   88 (328)
T cd07856          11 RYVDLQPVGMGAFGLVCSARDQ--LTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFV   88 (328)
T ss_pred             ceEEEEeecccCCeEEEEEEEC--CCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEE
Confidence            3556789999999999999876  567789999875422  2345678899999999999999999998865 5678999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      +||+ +++|.+++..  ..++...+..++.||+.||.|||+.   +|+|+||+|+||+++     .++.+||+|||.+..
T Consensus        89 ~e~~-~~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~-----~~~~~~l~dfg~~~~  157 (328)
T cd07856          89 TELL-GTDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILIN-----ENCDLKICDFGLARI  157 (328)
T ss_pred             eehh-ccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeEC-----CCCCEEeCccccccc
Confidence            9998 5689888753  3567788889999999999999999   999999999999998     778999999999875


Q ss_pred             cCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchh----hhHHHHHHH
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI----VLSDWVISC  720 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~----~~~~~~~~~  720 (788)
                      .....    ....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||..............    ...++.. .
T Consensus       158 ~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~  232 (328)
T cd07856         158 QDPQM----TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVIN-T  232 (328)
T ss_pred             cCCCc----CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH-h
Confidence            43221    22456788999998765 5789999999999999999999999965432110000000    0000000 0


Q ss_pred             hhcccccccccCCC-CCccc-----HHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          721 MLSRNLQVLVSHDP-EVLSD-----LERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       721 ~~~~~~~~l~~~~~-~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ........++.... .....     ......+.+++.+||+.+|++|||+++++..
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            00000000000000 00000     0123678899999999999999999999865

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.5e-31  Score=285.65  Aligned_cols=240  Identities=25%  Similarity=0.277  Sum_probs=191.9

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .|.+...+|.|+|+.|-.+.+.  .+.+..++|++.+...    +-.+|+.++.+. +||||+++.+.+.+..+.|+|||
T Consensus       323 ~y~~~~~~~~gs~s~~~~~~~~--~t~~~~~vkii~~~~~----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  323 SYEFREELGEGSFSAVKYCESS--PTDQEPAVKIISKRAD----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             hhccccccCCCCccceeeeecc--ccccchhheecccccc----ccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            3556677999999999999887  6777899999976522    234677666655 79999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      .+.++-|.+.+..... .. ..+..|+.+|+.|+.|||++   +||||||||+|||++    .+.++++|+|||.++...
T Consensus       397 ~l~g~ell~ri~~~~~-~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~----~~~g~lrltyFG~a~~~~  467 (612)
T KOG0603|consen  397 LLDGGELLRRIRSKPE-FC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLD----GSAGHLRLTYFGFWSELE  467 (612)
T ss_pred             hccccHHHHHHHhcch-hH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeec----CCCCcEEEEEechhhhCc
Confidence            9999988887755422 22 67778999999999999999   999999999999994    177899999999999876


Q ss_pred             CCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      ..    ....+-|..|.|||++....+++++|+||||++||+|++|+.||........           +...+..+...
T Consensus       468 ~~----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~e-----------i~~~i~~~~~s  532 (612)
T KOG0603|consen  468 RS----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIE-----------IHTRIQMPKFS  532 (612)
T ss_pred             hh----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHH-----------HHHhhcCCccc
Confidence            65    2233568899999999999999999999999999999999999986543310           11111111111


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                                  ....+...+|+.+||+.||.+||+|.++..+
T Consensus       533 ------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h  563 (612)
T KOG0603|consen  533 ------------ECVSDEAKDLLQQLLQVDPALRLGADEIGAH  563 (612)
T ss_pred             ------------cccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence                        3345677889999999999999999998753

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.97  E-value=1.1e-30  Score=284.59  Aligned_cols=265  Identities=22%  Similarity=0.284  Sum_probs=190.8

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecC------C
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE------D  560 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------~  560 (788)
                      .|.+.+.||+|+||.||++...  .++..||+|++....  ....+.+.+|++++++++||||+++++++...      .
T Consensus        18 ~y~~~~~lg~G~~g~v~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (345)
T cd07877          18 RYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   95 (345)
T ss_pred             ceEEEEEeeecCCeEEEEEEEc--CCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccc
Confidence            3445688999999999999876  567799999986532  23346788999999999999999999988543      3


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ..+++++++ +++|.+++..  ..+++..+..++.||++||.|||+.   +|+||||||+||+++     .++.+||+||
T Consensus        96 ~~~lv~~~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~-----~~~~~kl~df  164 (345)
T cd07877          96 DVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVN-----EDCELKILDF  164 (345)
T ss_pred             cEEEEehhc-ccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEc-----CCCCEEEecc
Confidence            467888887 7899888743  3588999999999999999999999   999999999999998     7789999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchh---hhHHH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI---VLSDW  716 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~---~~~~~  716 (788)
                      |++......    .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||..............   .....
T Consensus       165 g~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  240 (345)
T cd07877         165 GLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE  240 (345)
T ss_pred             ccccccccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence            998764322    123457889999998866 5688999999999999999999999965432111000000   00000


Q ss_pred             HHHHhhcccccccc---cCCCCCcc---cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          717 VISCMLSRNLQVLV---SHDPEVLS---DLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       717 ~~~~~~~~~~~~l~---~~~~~~~~---~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ..........+..+   ...+....   .......+.+++.+|++.||.+||++.+++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         241 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             HHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence            00000000000000   00000000   00124567899999999999999999999864

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.97  E-value=1.2e-30  Score=268.63  Aligned_cols=221  Identities=22%  Similarity=0.150  Sum_probs=175.7

Q ss_pred             cccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCCCHhHhh
Q 047157          499 GSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL  578 (788)
Q Consensus       499 G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~gsL~~~l  578 (788)
                      |.++.||++...  .++..+|+|.+....     .+.+|...+....||||+++++++.+.+..++||||+++++|.+++
T Consensus         4 g~~~~v~~~~~~--~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l   76 (237)
T cd05576           4 GVIDKVLLVMDT--RTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHI   76 (237)
T ss_pred             cccceEEEEEEc--cCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHH
Confidence            899999999887  677799999987643     2234555555567999999999999999999999999999999998


Q ss_pred             hccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCccccccc
Q 047157          579 FHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR  658 (788)
Q Consensus       579 ~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~  658 (788)
                      .+. ..+++..+..++.|++.||.|||++   +|+||||||+||+++     .++.++|+|||.+.......    ....
T Consensus        77 ~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~-----~~~~~~l~df~~~~~~~~~~----~~~~  143 (237)
T cd05576          77 SKF-LNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLD-----DRGHIQLTYFSRWSEVEDSC----DGEA  143 (237)
T ss_pred             HHh-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEc-----CCCCEEEecccchhcccccc----ccCC
Confidence            654 4588999999999999999999998   999999999999998     77889999999876554321    1234


Q ss_pred             CCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcc
Q 047157          659 GTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLS  738 (788)
Q Consensus       659 gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  738 (788)
                      ++..|+|||.+.+..++.++||||+|+++|||++|+.|+........                      .    ......
T Consensus       144 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~----------------------~----~~~~~~  197 (237)
T cd05576         144 VENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN----------------------T----HTTLNI  197 (237)
T ss_pred             cCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc----------------------c----ccccCC
Confidence            56789999999888899999999999999999999988753211000                      0    000000


Q ss_pred             cHHHHHHHHHHHhHccCCCCCCCCCHH
Q 047157          739 DLERFERMAMVGLWCNHPDPNLRPSMK  765 (788)
Q Consensus       739 ~~~~~~~l~~l~~~cl~~dP~~RPt~~  765 (788)
                      +......+.+++.+|++.||++||++.
T Consensus       198 ~~~~~~~~~~li~~~l~~dp~~R~~~~  224 (237)
T cd05576         198 PEWVSEEARSLLQQLLQFNPTERLGAG  224 (237)
T ss_pred             cccCCHHHHHHHHHHccCCHHHhcCCC
Confidence            111245678899999999999999973

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=3.8e-31  Score=240.33  Aligned_cols=201  Identities=25%  Similarity=0.392  Sum_probs=170.3

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCC
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMP  570 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~  570 (788)
                      .++||+|.||+||+|+.+  ++.+.||+|+++-+  .+..-....+|+-+++.++|.|||+++++...++...+|+||| 
T Consensus         7 mekigegtygtvfkarn~--~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c-   83 (292)
T KOG0662|consen    7 MEKIGEGTYGTVFKARNR--ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-   83 (292)
T ss_pred             HHhhcCCcceeeEecccC--CccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh-
Confidence            367999999999999876  78889999988643  3344456789999999999999999999999999999999999 


Q ss_pred             CCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCC
Q 047157          571 NGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ  650 (788)
Q Consensus       571 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~  650 (788)
                      ..+|..+...-...++.+....++.|+++||.|+|++   ++.||||||+|.||+     .++..||+|||+++.++-.-
T Consensus        84 dqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin-----~ngelkladfglarafgipv  155 (292)
T KOG0662|consen   84 DQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLIN-----RNGELKLADFGLARAFGIPV  155 (292)
T ss_pred             hHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEec-----cCCcEEecccchhhhcCCce
Confidence            4588888877778889999999999999999999999   999999999999998     89999999999999776443


Q ss_pred             CcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHh-CCCCCCccccccc
Q 047157          651 TRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEE  705 (788)
Q Consensus       651 ~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~  705 (788)
                      .. ....+-|..|.+|.++.+. -|+...|+||.|||+.|+.. |++.|.+.+..++
T Consensus       156 rc-ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddq  211 (292)
T KOG0662|consen  156 RC-YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ  211 (292)
T ss_pred             Ee-eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHH
Confidence            22 2233558899999998765 57899999999999999985 6666666554443

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.4e-31  Score=261.26  Aligned_cols=245  Identities=26%  Similarity=0.300  Sum_probs=194.9

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .|.++||+|.||.|-+++-+  .+++.+|+|++++..   .+....-..|-++|+..+||.+..+--.|+..+.+++|||
T Consensus       171 dfLKvLGkGTFGKVIL~rEK--at~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMe  248 (516)
T KOG0690|consen  171 DFLKVLGKGTFGKVILCREK--ATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVME  248 (516)
T ss_pred             hHHHHhcCCccceEEEEeec--ccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEE
Confidence            45689999999999998766  788899999998764   2334456678899999999999999889999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |..||.|.-+|.+. +.+++....-+-..|+.||.|||++   +||.||||.+|.|+|     .++++||+|||+++.--
T Consensus       249 yanGGeLf~HLsre-r~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLD-----kDGHIKitDFGLCKE~I  319 (516)
T KOG0690|consen  249 YANGGELFFHLSRE-RVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLD-----KDGHIKITDFGLCKEEI  319 (516)
T ss_pred             EccCceEeeehhhh-hcccchhhhhhhHHHHHHhhhhhhC---Ceeeeechhhhheec-----cCCceEeeecccchhcc
Confidence            99999999988554 5566666667888999999999999   999999999999999     89999999999998643


Q ss_pred             CCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      ... .....++||+.|+|||++....|..+.|.|.+||++|||++|+.||...+.+..        .+    .+.-.+  
T Consensus       320 ~~g-~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kL--------Fe----LIl~ed--  384 (516)
T KOG0690|consen  320 KYG-DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKL--------FE----LILMED--  384 (516)
T ss_pred             ccc-ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHH--------HH----HHHhhh--
Confidence            332 334568999999999999999999999999999999999999999976533221        11    111111  


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIH  769 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~  769 (788)
                            ...  +.....+...|+...|..||.+|.     .++||.+
T Consensus       385 ------~kF--Pr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~  423 (516)
T KOG0690|consen  385 ------LKF--PRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMR  423 (516)
T ss_pred             ------ccC--CccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHh
Confidence                  111  111223445667778899999994     4666654

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=5.9e-31  Score=268.85  Aligned_cols=261  Identities=24%  Similarity=0.324  Sum_probs=196.9

Q ss_pred             HHHhhcccccccccccceEEEEEEeccCcceeeeeeec--ccch-----HHHHHHHHHHHHHhcCCCccccceEeeEEe-
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKL--EKDI-----EKTNEEFMTELKIIGRTHHKNLVRLLGFCS-  557 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l--~~~~-----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-  557 (788)
                      ....|-+.++||+|||+.||++.+-  ..++.||||+-  .+..     ....+...+|.++.+.|.||.||++|+++. 
T Consensus       461 Ln~RYLlLhLLGrGGFSEVyKAFDl--~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl  538 (775)
T KOG1151|consen  461 LNDRYLLLHLLGRGGFSEVYKAFDL--TEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL  538 (775)
T ss_pred             hHHHHHHHHHhccccHHHHHHhccc--chhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence            3444555688999999999999876  56678888864  2222     223456788999999999999999999985 


Q ss_pred             cCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          558 EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       558 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                      +.+..+-|+|||+|.+|+-||... +.+++.++..|+.||+.||.||.+. +++|||-||||.|||+-...  ..+.+||
T Consensus       539 DtdsFCTVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~Gt--acGeIKI  614 (775)
T KOG1151|consen  539 DTDSFCTVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGT--ACGEIKI  614 (775)
T ss_pred             ccccceeeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCc--ccceeEe
Confidence            456788999999999999999654 6789999999999999999999996 77999999999999997544  6789999


Q ss_pred             eecCCccccCCCCCc------ccccccCCccccCcccccC----CCCCccCcchhhHHHHHHHHhCCCCCCccccccccc
Q 047157          638 SDFGISKLLNKDQTR------TDTNMRGTMGYVAPEWLRN----VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESE  707 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~----~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~  707 (788)
                      .|||+++++..+...      ......||..|++||.+.-    .+++.|+||||.|||+|..+.|+.||........  
T Consensus       615 TDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQd--  692 (775)
T KOG1151|consen  615 TDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQD--  692 (775)
T ss_pred             eecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHH--
Confidence            999999998655433      2345679999999998742    3578899999999999999999999975422111  


Q ss_pred             cchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 047157          708 EVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI  768 (788)
Q Consensus       708 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl  768 (788)
                          .+..-.  .+....        ...........+...+|++||+..-++|....++.
T Consensus       693 ----ILqeNT--IlkAtE--------VqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  693 ----ILQENT--ILKATE--------VQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             ----HHhhhc--hhccee--------ccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence                000000  000000        11111112234556788999999999998877765

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.97  E-value=5.2e-30  Score=300.66  Aligned_cols=145  Identities=28%  Similarity=0.324  Sum_probs=128.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.++||+|+||+||+|...  ..+..||||++....   ......+..|+.++..++||||+++++++...+..+||
T Consensus         5 ~y~i~~~LG~G~fg~Vy~a~~~--~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV   82 (669)
T cd05610           5 EFVIVKPISRGAFGKVYLGRKK--NNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV   82 (669)
T ss_pred             CEEEEEEEecCCCeEEEEEEEC--CCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence            3566789999999999999886  567799999986432   33456788999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |||+.+++|.+++... ..+++..++.|+.||+.||.|||.+   +|+||||||+|||++     .++.+||+|||+++
T Consensus        83 mEy~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~-----~~g~vkL~DFGls~  152 (669)
T cd05610          83 MEYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLIS-----NEGHIKLTDFGLSK  152 (669)
T ss_pred             EeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEc-----CCCCEEEEeCCCCc
Confidence            9999999999998654 4578888999999999999999998   999999999999998     77899999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=4.4e-31  Score=267.83  Aligned_cols=245  Identities=27%  Similarity=0.340  Sum_probs=195.5

Q ss_pred             HHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCC-CccccceEeeEEecC
Q 047157          484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEE  559 (788)
Q Consensus       484 ~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~  559 (788)
                      .|.....+|..+||+|+||.|.++.-+  ++...+|||+++++.   .+..+.-+.|-++|... +-|.+++++.+|+.-
T Consensus       345 ~i~~tDFnFl~VlGKGSFGKVlLaerk--gtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm  422 (683)
T KOG0696|consen  345 RIKATDFNFLMVLGKGSFGKVLLAERK--GTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM  422 (683)
T ss_pred             ceeecccceEEEeccCccceeeeeccc--CcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh
Confidence            355566789999999999999999766  777799999998764   22334456788888776 578999999999999


Q ss_pred             CeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEee
Q 047157          560 DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD  639 (788)
Q Consensus       560 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~D  639 (788)
                      +.+|+||||+.||+|--++++-+ ++.+..+.-++..||-||-+||++   +|+.||||.+||++|     .++++||+|
T Consensus       423 DRLyFVMEyvnGGDLMyhiQQ~G-kFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd-----~eGHiKi~D  493 (683)
T KOG0696|consen  423 DRLYFVMEYVNGGDLMYHIQQVG-KFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLD-----SEGHIKIAD  493 (683)
T ss_pred             hheeeEEEEecCchhhhHHHHhc-ccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEec-----cCCceEeee
Confidence            99999999999999988886653 455566778999999999999999   999999999999999     889999999


Q ss_pred             cCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHH
Q 047157          640 FGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVIS  719 (788)
Q Consensus       640 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  719 (788)
                      ||+++.---+. .....++||+.|+|||++...+|...+|.|||||+||||+.|+.||++.+..+.-            .
T Consensus       494 FGmcKEni~~~-~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF------------~  560 (683)
T KOG0696|consen  494 FGMCKENIFDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELF------------Q  560 (683)
T ss_pred             cccccccccCC-cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHH------------H
Confidence            99998543222 2334589999999999999999999999999999999999999999987543321            1


Q ss_pred             HhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC
Q 047157          720 CMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP  762 (788)
Q Consensus       720 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP  762 (788)
                      .+.+.          ....+-....+.+.+....|...|.+|.
T Consensus       561 aI~eh----------nvsyPKslSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  561 AIMEH----------NVSYPKSLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             HHHHc----------cCcCcccccHHHHHHHHHHhhcCCcccc
Confidence            11111          1112223345667778888888999884

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=1.4e-29  Score=279.95  Aligned_cols=250  Identities=26%  Similarity=0.360  Sum_probs=203.2

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEe-----cCCeEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCS-----EEDKRL  563 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~-----~~~~~~  563 (788)
                      ..|.++||+|.+|.||+++..  .+++..|+|++.-. ....+++..|.++++.+ +|||++.+++++.     .++.++
T Consensus        21 ~ei~evig~Gtygkv~k~k~~--~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLW   97 (953)
T KOG0587|consen   21 FEIIEVIGNGTYGKVYKGRHV--KTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLW   97 (953)
T ss_pred             cEEEEEEeeccceeEEEEeee--ecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEE
Confidence            456789999999999999888  55556677766543 34556788899999888 6999999999884     356899


Q ss_pred             EEEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          564 LVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ||||||.+||..+++..- +.++.|..+..|++.+++||.|||..   .++|||||-.|||++     .++.+||.|||+
T Consensus        98 LVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT-----~e~~VKLvDFGv  169 (953)
T KOG0587|consen   98 LVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLT-----ENAEVKLVDFGV  169 (953)
T ss_pred             EEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEe-----ccCcEEEeeeee
Confidence            999999999999999643 67889999999999999999999999   999999999999999     889999999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccC-----CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHH
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRN-----VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV  717 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~  717 (788)
                      +..+...... .....||+.|||||++..     ..|+..+|+||||++..||.-|.+|+........            
T Consensus       170 SaQldsT~gr-RnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra------------  236 (953)
T KOG0587|consen  170 SAQLDSTVGR-RNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA------------  236 (953)
T ss_pred             eeeeeccccc-ccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh------------
Confidence            9877543322 234679999999999843     3577899999999999999999999854311110            


Q ss_pred             HHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       718 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                             .+...-.+.|.........+++.++|..||..|-++||++.+++++
T Consensus       237 -------LF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  237 -------LFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             -------hccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence                   0111222455566677889999999999999999999999988753

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.96  E-value=2.2e-29  Score=259.00  Aligned_cols=238  Identities=29%  Similarity=0.363  Sum_probs=192.0

Q ss_pred             ccceEEEEEEeccCcceeeeeeecccchHHH-HHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCCCHhHhh
Q 047157          500 SSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-NEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL  578 (788)
Q Consensus       500 ~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~gsL~~~l  578 (788)
                      +||.||+|...  .++..+++|.+....... .+.+.+|++.+++++|+||+++++++......++++|++++++|.+++
T Consensus         1 ~~g~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~   78 (244)
T smart00220        1 SFGKVYLARDK--KTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL   78 (244)
T ss_pred             CceEEEEEEEC--CCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence            58999999886  556789999987654433 678999999999999999999999999999999999999999999998


Q ss_pred             hccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCccccccc
Q 047157          579 FHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR  658 (788)
Q Consensus       579 ~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~  658 (788)
                      ..... +++..++.++.+++++|.|||+.   +++|+||+|+||+++     .++.++|+|||.+.......  ......
T Consensus        79 ~~~~~-~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~-----~~~~~~l~d~~~~~~~~~~~--~~~~~~  147 (244)
T smart00220       79 KKRGR-LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLD-----EDGHVKLADFGLARQLDPGG--LLTTFV  147 (244)
T ss_pred             HhccC-CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEEC-----CCCcEEEccccceeeecccc--cccccc
Confidence            65433 88999999999999999999999   999999999999998     77899999999998765432  223356


Q ss_pred             CCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcc
Q 047157          659 GTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLS  738 (788)
Q Consensus       659 gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  738 (788)
                      ++..|+|||.+....++.++||||||+++++|++|..||.......       ...    .......        .....
T Consensus       148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~-------~~~----~~~~~~~--------~~~~~  208 (244)
T smart00220      148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL-------ELF----KKIGKPK--------PPFPP  208 (244)
T ss_pred             CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH-------HHH----HHHhccC--------CCCcc
Confidence            7889999999998889999999999999999999999986531110       000    1111100        00000


Q ss_pred             cHH-HHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          739 DLE-RFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       739 ~~~-~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ... ....+.+++.+|+..+|++||++.++++
T Consensus       209 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      209 PEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             ccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            000 3467888999999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=2.8e-31  Score=253.64  Aligned_cols=267  Identities=21%  Similarity=0.308  Sum_probs=194.2

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeeccc--chHHHHHHHHHHHHHhcCCCccccceEeeEEec--------CCeE
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE--------EDKR  562 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--------~~~~  562 (788)
                      ..+||+|.||.||+|+.+  .+++.||+|+.--  .....-....+|+.+|..+.|+|++.+++.|..        ....
T Consensus        22 ~~kigqGtfgeVFkAr~~--n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~   99 (376)
T KOG0669|consen   22 LAKIGQGTFGEVFKARSK--NTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATF   99 (376)
T ss_pred             HHhcCCchHHHHHHHhhc--CccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccccee
Confidence            357999999999999876  6677788886532  222233456799999999999999999998843        2358


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      |+|+.+|+. +|..+|.....+++..++.+++.++..||.|+|..   .|+|||+||.|+||+     .++.+||+|||+
T Consensus       100 ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt-----~dgilklADFGl  170 (376)
T KOG0669|consen  100 YLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLIT-----KDGILKLADFGL  170 (376)
T ss_pred             eeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEc-----CCceEEeecccc
Confidence            999999965 88999977778899999999999999999999999   999999999999999     889999999999


Q ss_pred             ccccCCCCC---cccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHH---
Q 047157          643 SKLLNKDQT---RTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSD---  715 (788)
Q Consensus       643 a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~---  715 (788)
                      ++.+.....   ...++.+-|..|++||.+.+ ..++++.|||..|||+.||.++.+.+.+.........+......   
T Consensus       171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk  250 (376)
T KOG0669|consen  171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK  250 (376)
T ss_pred             ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence            987643322   22345566999999998865 57999999999999999999999988766443322111111100   


Q ss_pred             HHHHHhhcccccccccCC--CCC--cccHHH------HHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          716 WVISCMLSRNLQVLVSHD--PEV--LSDLER------FERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       716 ~~~~~~~~~~~~~l~~~~--~~~--~~~~~~------~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      -+|+....-.+-.-+...  ++.  ..-.+.      -.+.++|+..++..||.+|+++.+++.+
T Consensus       251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh  315 (376)
T KOG0669|consen  251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH  315 (376)
T ss_pred             ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence            011111110010011000  000  000111      1356788889999999999999998864

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.96  E-value=8.1e-30  Score=237.16  Aligned_cols=196  Identities=29%  Similarity=0.389  Sum_probs=165.8

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEEecCC
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELMP  570 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~e~~~  570 (788)
                      .+.||+|++|.|-+-++.  .++...|+|++.... .+..++..+|+.+..+. .+|.+|+++|....+...++.||.| 
T Consensus        51 i~elGrGayG~vekmrh~--~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M-  127 (282)
T KOG0984|consen   51 IEELGRGAYGVVEKMRHI--QSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM-  127 (282)
T ss_pred             hhhhcCCccchhhheeec--cCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh-
Confidence            367999999999888776  788899999997543 45567888999887765 7999999999999999999999999 


Q ss_pred             CCCHhHhhh---ccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          571 NGTLSNFLF---HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       571 ~gsL~~~l~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      ..||+.+-.   +.+...++..+-+|+..+++||.|||++  ..++|||+||+||||+     ..+++|++|||++-.+.
T Consensus       128 ~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn-----~~GqVKiCDFGIsG~L~  200 (282)
T KOG0984|consen  128 DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILIN-----YDGQVKICDFGISGYLV  200 (282)
T ss_pred             hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEc-----cCCcEEEcccccceeeh
Confidence            567776653   4677889999999999999999999998  6899999999999999     88999999999998765


Q ss_pred             CCCCcccccccCCccccCccccc----CCCCCccCcchhhHHHHHHHHhCCCCCCcc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLR----NVPVTTKVDVFSFGVMLLEIICGRRHIELS  700 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~----~~~~s~k~DVwSlGvil~elltg~~p~~~~  700 (788)
                      ..-.  .+...|...|||||.+.    ...|+-|+||||||+.+.||.+++.|++..
T Consensus       201 dSiA--kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w  255 (282)
T KOG0984|consen  201 DSIA--KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW  255 (282)
T ss_pred             hhhH--HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence            4322  22245777899999884    347899999999999999999999999754

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.96  E-value=2.1e-29  Score=288.22  Aligned_cols=266  Identities=19%  Similarity=0.138  Sum_probs=168.5

Q ss_pred             HhhcccccccccccceEEEEEEeccCc----ceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeE------Ee
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDT----QIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF------CS  557 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~----~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~------~~  557 (788)
                      ..|.+.++||+|+||.||+|.+.  .+    +..||+|++.....  .+....|  .+....+.++..++..      ..
T Consensus       132 ~~y~l~~~LG~G~FG~VYka~~~--~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        132 DDFVLGKKLGEGAFGVVYKASLV--NKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             CCeEEeEEEeeCCCeEEEEEEEc--CCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            34667799999999999999986  44    67899998764321  1111111  1112222222222211      24


Q ss_pred             cCCeEEEEEecCCCCCHhHhhhccCCCC-------------------CHHHHHHHHHHHHHHHHHhhhccCCceEecCCC
Q 047157          558 EEDKRLLVYELMPNGTLSNFLFHEGQRP-------------------GWVQRVEIALGVARGLLYLHEECETQIIHCDIK  618 (788)
Q Consensus       558 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~-------------------~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlk  618 (788)
                      .+...++|+||+++++|.+++.......                   ....+..++.||+.||.|||++   +|+|||||
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK  282 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK  282 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence            5678999999999999999986542111                   1234567999999999999998   99999999


Q ss_pred             CCcEEeccCCCCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCC----------------------CCCc
Q 047157          619 PQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV----------------------PVTT  676 (788)
Q Consensus       619 p~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~s~  676 (788)
                      |+|||++.    .++.+||+|||+++.+............+++.|+|||.+...                      .++.
T Consensus       283 P~NILl~~----~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~  358 (566)
T PLN03225        283 PQNIIFSE----GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPD  358 (566)
T ss_pred             HHHEEEeC----CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCC
Confidence            99999972    357899999999987654444444456789999999965322                      2345


Q ss_pred             cCcchhhHHHHHHHHhCCCCCCcccccc--ccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHcc
Q 047157          677 KVDVFSFGVMLLEIICGRRHIELSRVEE--ESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCN  754 (788)
Q Consensus       677 k~DVwSlGvil~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl  754 (788)
                      ++|||||||+||||+++..++.......  ...........|...  .......-+....+  ..........+|+.+||
T Consensus       359 k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~d~~~~~~~dLi~~mL  434 (566)
T PLN03225        359 RFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKL--VEPRASPDLRRGFE--VLDLDGGAGWELLKSMM  434 (566)
T ss_pred             CcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHh--hccccchhhhhhhh--hccccchHHHHHHHHHc
Confidence            6799999999999999776653221000  000000111111110  00000000000000  00001224558999999


Q ss_pred             CCCCCCCCCHHHHHHH
Q 047157          755 HPDPNLRPSMKKVIHM  770 (788)
Q Consensus       755 ~~dP~~RPt~~evl~~  770 (788)
                      +.||++|||++|++++
T Consensus       435 ~~dP~kR~ta~e~L~H  450 (566)
T PLN03225        435 RFKGRQRISAKAALAH  450 (566)
T ss_pred             cCCcccCCCHHHHhCC
Confidence            9999999999999975

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.96  E-value=8.8e-30  Score=257.29  Aligned_cols=255  Identities=25%  Similarity=0.334  Sum_probs=201.4

Q ss_pred             hcccccccccccceEEEEEEeccC---cceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEec-CCeEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKD---TQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSE-EDKRLL  564 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~---~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~l  564 (788)
                      ...+.++-+|.||.||+|+++..+   +.+.|.+|.++... +-....+..|...+..+.|||+..+.+++.+ .+..++
T Consensus       286 v~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V  365 (563)
T KOG1024|consen  286 VRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFV  365 (563)
T ss_pred             eechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceE
Confidence            344567899999999999887433   34568888886543 3345678899999999999999999998855 557789


Q ss_pred             EEecCCCCCHhHhhhc-------cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          565 VYELMPNGTLSNFLFH-------EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~-------~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                      +|.++.-|+|..+|..       ..+..+..+...++.|++.|++|||.+   +|||.||..+|.+||     +..++||
T Consensus       366 ~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvId-----d~LqVkl  437 (563)
T KOG1024|consen  366 LYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVID-----DQLQVKL  437 (563)
T ss_pred             EEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceeh-----hheeEEe
Confidence            9999999999999962       123456778889999999999999999   999999999999999     8899999


Q ss_pred             eecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHH
Q 047157          638 SDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSD  715 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~  715 (788)
                      +|-.+++.+-+.... ...+......||+||.+.+..|+.++|||||||++|||+| |+.|+...++.+.          
T Consensus       438 tDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm----------  507 (563)
T KOG1024|consen  438 TDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM----------  507 (563)
T ss_pred             ccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH----------
Confidence            999999876443322 2222334678999999999999999999999999999997 7888864433221          


Q ss_pred             HHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          716 WVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       716 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                                 ...+...-+...+.+.++++..++..||..+|++||+.+|++.-|.+
T Consensus       508 -----------~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLse  554 (563)
T KOG1024|consen  508 -----------EHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSE  554 (563)
T ss_pred             -----------HHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence                       11111223334455678899999999999999999999999998864

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.96  E-value=8.5e-30  Score=280.49  Aligned_cols=244  Identities=30%  Similarity=0.448  Sum_probs=186.2

Q ss_pred             ccccccccce-EEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEEecCCC
Q 047157          494 KLVGTGSSGK-VYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELMPN  571 (788)
Q Consensus       494 ~~lg~G~~g~-Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~e~~~~  571 (788)
                      +++|.|+.|+ ||+|..    .+++||||++-..   ......+|+..|+.- +|||||++++.-.++...||..|.| .
T Consensus       515 eilG~Gs~Gt~Vf~G~y----e~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-~  586 (903)
T KOG1027|consen  515 EILGYGSNGTVVFRGVY----EGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-A  586 (903)
T ss_pred             HHcccCCCCcEEEEEee----CCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-h
Confidence            6789998875 699987    3569999998533   344567899999877 6999999999999999999999999 6


Q ss_pred             CCHhHhhhccCCCC---CHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          572 GTLSNFLFHEGQRP---GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       572 gsL~~~l~~~~~~~---~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      .+|.+++.......   .....+.++.|++.||+|||+.   +||||||||+||||+.........++|+|||+++.+..
T Consensus       587 ~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~  663 (903)
T KOG1027|consen  587 CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG  663 (903)
T ss_pred             hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence            79999997641111   1134567899999999999998   99999999999999854333557899999999998865


Q ss_pred             CCCcc--cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhC-CCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          649 DQTRT--DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG-RRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       649 ~~~~~--~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      +....  .....||-+|+|||++....-+.++||||+||++|+.++| .+||...-..+..              +..+.
T Consensus       664 ~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~N--------------Il~~~  729 (903)
T KOG1027|consen  664 GKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQAN--------------ILTGN  729 (903)
T ss_pred             CcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhh--------------hhcCc
Confidence            54332  3456799999999999988888899999999999999987 8999754211100              00010


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      . .+.    ......+.  +..+||.+|+++||..||++.+|+.
T Consensus       730 ~-~L~----~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  730 Y-TLV----HLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             c-cee----eeccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence            0 000    00011111  6788999999999999999999975

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.96  E-value=9.5e-29  Score=275.50  Aligned_cols=264  Identities=18%  Similarity=0.220  Sum_probs=178.0

Q ss_pred             hhcccccccccccceEEEEEEec--------------cCcceeeeeeecccchHHHHHHHH--------------HHHHH
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRL--------------KDTQIEIAVKKLEKDIEKTNEEFM--------------TELKI  540 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~--------------~~~~~~vavK~l~~~~~~~~~~~~--------------~E~~~  540 (788)
                      .+.+.++||+|+||+||+|....              ...+..||||++........++|.              .|+..
T Consensus       146 ~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~  225 (507)
T PLN03224        146 DFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYM  225 (507)
T ss_pred             CceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHH
Confidence            45667899999999999997521              133457999998654433333333              46666


Q ss_pred             hcCCCcccc-----ceEeeEEec--------CCeEEEEEecCCCCCHhHhhhccC-----------------------CC
Q 047157          541 IGRTHHKNL-----VRLLGFCSE--------EDKRLLVYELMPNGTLSNFLFHEG-----------------------QR  584 (788)
Q Consensus       541 l~~l~hpni-----v~~~~~~~~--------~~~~~lV~e~~~~gsL~~~l~~~~-----------------------~~  584 (788)
                      +.+++|.++     ++++++|..        .+..+|||||+++++|.++++...                       ..
T Consensus       226 l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~  305 (507)
T PLN03224        226 CAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDK  305 (507)
T ss_pred             HHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccccc
Confidence            666766544     677777643        356899999999999999986421                       12


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCcccccccCCcccc
Q 047157          585 PGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV  664 (788)
Q Consensus       585 ~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~  664 (788)
                      +++..+..++.|++.+|.|||+.   +|+||||||+|||++     .++.+||+|||++...............+++.|+
T Consensus       306 ~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~-----~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~  377 (507)
T PLN03224        306 RDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVT-----VDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYS  377 (507)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEEC-----CCCcEEEEeCcCccccccCCccCccccCCCccee
Confidence            35677889999999999999998   999999999999998     7789999999999765433222222233578999


Q ss_pred             CcccccCCCC----------------------CccCcchhhHHHHHHHHhCCC-CCCcccccccc-ccchhhhHHHHHHH
Q 047157          665 APEWLRNVPV----------------------TTKVDVFSFGVMLLEIICGRR-HIELSRVEEES-EEVDIVLSDWVISC  720 (788)
Q Consensus       665 aPE~~~~~~~----------------------s~k~DVwSlGvil~elltg~~-p~~~~~~~~~~-~~~~~~~~~~~~~~  720 (788)
                      |||.+.....                      ..+.||||+||++|+|++|.. |+......... ......+..|..  
T Consensus       378 aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~--  455 (507)
T PLN03224        378 PPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM--  455 (507)
T ss_pred             ChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh--
Confidence            9998753221                      235799999999999999875 66432111110 001111111111  


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCC---CCCCCHHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDP---NLRPSMKKVIHM  770 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP---~~RPt~~evl~~  770 (788)
                      ....        ...........+...+++.++|..+|   .+|+|++|++++
T Consensus       456 ~~~~--------~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H  500 (507)
T PLN03224        456 YKGQ--------KYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH  500 (507)
T ss_pred             hccc--------CCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence            1000        11111112234567788888998765   789999999864

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=7.6e-29  Score=245.41  Aligned_cols=246  Identities=24%  Similarity=0.340  Sum_probs=194.5

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeecccchH---HHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEE
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .+.++||+|+|+.|.++.++  .+.+.+|+|++++..-   +...-...|-.+..+. +||.+|-++.+|+.+..+++|.
T Consensus       253 ~ll~vigrgsyakvl~~~~~--~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvi  330 (593)
T KOG0695|consen  253 DLLRVIGRGSYAKVLLVRLK--KTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVI  330 (593)
T ss_pred             eeeeeecCcchhhhhheehc--ccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEE
Confidence            34689999999999999887  7778999999876532   2233445666676665 7999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++|+|--+++.. ++++++.+.-+...|+-||.|||++   |||.||||.+|||+|     ..+++||+|+|+++.-
T Consensus       331 eyv~ggdlmfhmqrq-rklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlld-----aeghikltdygmcke~  401 (593)
T KOG0695|consen  331 EYVNGGDLMFHMQRQ-RKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLD-----AEGHIKLTDYGMCKEG  401 (593)
T ss_pred             EEecCcceeeehhhh-hcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEc-----cCCceeecccchhhcC
Confidence            999999998777544 5677777777888999999999999   999999999999999     8899999999999865


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      -.+.. ....++||+.|+|||++++..|....|.|+|||+++||+.|+.||+......    .+....++....+.+..+
T Consensus       402 l~~gd-~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n----~d~ntedylfqvilekqi  476 (593)
T KOG0695|consen  402 LGPGD-TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDN----PDMNTEDYLFQVILEKQI  476 (593)
T ss_pred             CCCCc-ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCC----cccchhHHHHHHHhhhcc
Confidence            43332 3456899999999999999999999999999999999999999998654332    223344555555554433


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP  762 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP  762 (788)
                      +-..          ....+...+++.-|+.||.+|.
T Consensus       477 ripr----------slsvkas~vlkgflnkdp~erl  502 (593)
T KOG0695|consen  477 RIPR----------SLSVKASHVLKGFLNKDPKERL  502 (593)
T ss_pred             cccc----------eeehhhHHHHHHhhcCCcHHhc
Confidence            2211          1122344567778899999984

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.1e-29  Score=264.12  Aligned_cols=244  Identities=21%  Similarity=0.240  Sum_probs=195.7

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMP  570 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~  570 (788)
                      ..||-|+||.|=++..+  ......|+|.+++..   ....+.+..|-.+|...+.|.||++|-.|.+....|++||-|-
T Consensus       426 aTLGvGgFGRVELV~~~--~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaCl  503 (732)
T KOG0614|consen  426 ATLGVGGFGRVELVKVN--SQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACL  503 (732)
T ss_pred             hhcccCccceEEEEEec--ccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhc
Confidence            46999999999998876  333358899886542   4556788999999999999999999999999999999999999


Q ss_pred             CCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCC
Q 047157          571 NGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ  650 (788)
Q Consensus       571 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~  650 (788)
                      ||.|...|+++ ..++..+..-++..+.+|++|||.+   +||.|||||+|.+++     .++-+||.|||+|+.+....
T Consensus       504 GGElWTiLrdR-g~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd-----~~Gy~KLVDFGFAKki~~g~  574 (732)
T KOG0614|consen  504 GGELWTILRDR-GSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLD-----NRGYLKLVDFGFAKKIGSGR  574 (732)
T ss_pred             Cchhhhhhhhc-CCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeec-----cCCceEEeehhhHHHhccCC
Confidence            99999999766 4566666677888899999999999   999999999999999     88899999999999886544


Q ss_pred             CcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccc
Q 047157          651 TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLV  730 (788)
Q Consensus       651 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  730 (788)
                      .  .-+++||+.|.|||++.++..+.++|.||||+++|||++|.+||...+.......+-..+..+              
T Consensus       575 K--TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i--------------  638 (732)
T KOG0614|consen  575 K--TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI--------------  638 (732)
T ss_pred             c--eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh--------------
Confidence            3  335899999999999999999999999999999999999999998765432211110000000              


Q ss_pred             cCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHHH
Q 047157          731 SHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS-----MKKVIHM  770 (788)
Q Consensus       731 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~  770 (788)
                            ..+........+++++.+..+|.+|.-     +.+|.++
T Consensus       639 ------~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH  677 (732)
T KOG0614|consen  639 ------EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH  677 (732)
T ss_pred             ------hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence                  001123445667888888899999975     6666654

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=9.9e-30  Score=245.39  Aligned_cols=267  Identities=22%  Similarity=0.296  Sum_probs=196.1

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccchHH--HHHHHHHHHHHhcCCCccccceEeeEEecCC-----eEEEE
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK--TNEEFMTELKIIGRTHHKNLVRLLGFCSEED-----KRLLV  565 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~~~lV  565 (788)
                      .+.||.|+||.||.+.+.  .+++.|++|++......  ..+.+.+|+++|..++|.|++..+++.+-..     ++|++
T Consensus        58 DRPIGYGAFGVVWsVTDP--RdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~  135 (449)
T KOG0664|consen   58 DRPIGYGAFGVVWSVTDP--RSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL  135 (449)
T ss_pred             CCcccccceeEEEeccCC--CCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence            367999999999999877  67889999998765433  3468889999999999999999988875543     56888


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      +|.| ..+|...+.. .+.++...+.-++.||++||+|||+.   +|.||||||.|.|++     .+..+||+|||+++.
T Consensus       136 TELm-QSDLHKIIVS-PQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVN-----SNCvLKICDFGLARv  205 (449)
T KOG0664|consen  136 TELM-QSDLHKIIVS-PQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVN-----SNCILKICDFGLART  205 (449)
T ss_pred             HHHH-Hhhhhheecc-CCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEec-----cCceEEecccccccc
Confidence            8988 4577776643 35677788888999999999999999   999999999999998     899999999999998


Q ss_pred             cCCCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh---
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM---  721 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---  721 (788)
                      -..+....++..+-|..|.|||++.+. .|+.+.||||.|||+.||+..+..|......+..+.+...+.....+.+   
T Consensus       206 ee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~A  285 (449)
T KOG0664|consen  206 WDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYA  285 (449)
T ss_pred             cchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHH
Confidence            877777777766778999999999765 6899999999999999999998888765443322111100000000000   


Q ss_pred             hcccccccccCCCC-----C----cccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          722 LSRNLQVLVSHDPE-----V----LSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       722 ~~~~~~~l~~~~~~-----~----~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                      -++....++...+.     .    ......-.+.+.+...++.+||.+|.+.++.+..+
T Consensus       286 CEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~  344 (449)
T KOG0664|consen  286 CEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR  344 (449)
T ss_pred             hhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence            00100011111110     0    01112223445677779999999999999998776

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=5.4e-28  Score=256.96  Aligned_cols=203  Identities=26%  Similarity=0.325  Sum_probs=170.8

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccchH---HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      .+.||-|+||.|.++.-.  ++...+|+|.+++...   ......+.|-.||...+.+-||+++-.|++.+.+|+||||+
T Consensus       634 ik~iGvGAFGeV~Lv~Kv--DT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYI  711 (1034)
T KOG0608|consen  634 IKTIGVGAFGEVCLVRKV--DTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYI  711 (1034)
T ss_pred             EeeecccccceeEEEeec--chhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEecc
Confidence            367999999999998765  6777999999987542   33456788999999999999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC-
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-  648 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~-  648 (788)
                      +||++-.+|.+. ..+++..+..++..+..|+++.|..   |+|||||||+|||||     .++++||+|||++.-+.- 
T Consensus       712 PGGDmMSLLIrm-gIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILID-----rdGHIKLTDFGLCTGfRWT  782 (1034)
T KOG0608|consen  712 PGGDMMSLLIRM-GIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILID-----RDGHIKLTDFGLCTGFRWT  782 (1034)
T ss_pred             CCccHHHHHHHh-ccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEc-----cCCceeeeeccccccceec
Confidence            999999999766 3456666667778899999999998   999999999999999     889999999999875420 


Q ss_pred             ---------CCC-------------------------------cccccccCCccccCcccccCCCCCccCcchhhHHHHH
Q 047157          649 ---------DQT-------------------------------RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLL  688 (788)
Q Consensus       649 ---------~~~-------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~  688 (788)
                               +..                               ......+||+.|+|||++....++..+|.||.|||||
T Consensus       783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~  862 (1034)
T KOG0608|consen  783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY  862 (1034)
T ss_pred             cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence                     000                               0011246999999999999999999999999999999


Q ss_pred             HHHhCCCCCCcccccccc
Q 047157          689 EIICGRRHIELSRVEEES  706 (788)
Q Consensus       689 elltg~~p~~~~~~~~~~  706 (788)
                      ||+.|+.||-.....+..
T Consensus       863 em~~g~~pf~~~tp~~tq  880 (1034)
T KOG0608|consen  863 EMLVGQPPFLADTPGETQ  880 (1034)
T ss_pred             HHhhCCCCccCCCCCcce
Confidence            999999999876555443

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.95  E-value=5.1e-28  Score=228.33  Aligned_cols=265  Identities=17%  Similarity=0.226  Sum_probs=193.8

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC-ccccceEeeEEecCC--eEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEED--KRLL  564 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~--~~~l  564 (788)
                      ..|.+.+++|+|.|+.||.|...  .+...++||.++..   ..+.+.+|+.+|..|. ||||++++++..+..  ...|
T Consensus        38 ddYeivrk~GRGKYSEVFeg~~~--~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL  112 (338)
T KOG0668|consen   38 DDYEIVRKVGRGKYSEVFEGINI--TNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL  112 (338)
T ss_pred             chHHHHHHHcCccHhhHhccccc--CCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence            34667789999999999999876  55668999998743   4567889999999996 999999999987644  5679


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |+||+.+.+...+.    ..++...+..++.+++.||.|+|+.   ||+|||+||.|++||.    ....++|+|+|+|.
T Consensus       113 iFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh----~~rkLrlIDWGLAE  181 (338)
T KOG0668|consen  113 IFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDH----ELRKLRLIDWGLAE  181 (338)
T ss_pred             HhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeech----hhceeeeeecchHh
Confidence            99999998877665    4567778888999999999999999   9999999999999994    56789999999999


Q ss_pred             ccCCCCCcccccccCCccccCccccc-CCCCCccCcchhhHHHHHHHHhCCCCCCccccc-cccccchhhh-----HHHH
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLR-NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVE-EESEEVDIVL-----SDWV  717 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~-~~~~~~~~~~-----~~~~  717 (788)
                      ...+.....  ..+.+..|.-||.+. ...|+..-|+|||||+|..|+..+.||...... ++.-.+...+     ..++
T Consensus       182 FYHp~~eYn--VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl  259 (338)
T KOG0668|consen  182 FYHPGKEYN--VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYL  259 (338)
T ss_pred             hcCCCceee--eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHH
Confidence            876544332  235677899999884 456889999999999999999999998643221 1111111111     0111


Q ss_pred             HH--HhhcccccccccCCCCC--------cccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          718 IS--CMLSRNLQVLVSHDPEV--------LSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       718 ~~--~~~~~~~~~l~~~~~~~--------~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ..  ...++.+..+++.....        ....-...+.++++...|..|-.+|||++|.+.+
T Consensus       260 ~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H  322 (338)
T KOG0668|consen  260 NKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH  322 (338)
T ss_pred             HHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence            00  00112222222111110        0011123567888889999999999999998863

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.95  E-value=1.3e-26  Score=232.37  Aligned_cols=212  Identities=34%  Similarity=0.543  Sum_probs=183.1

Q ss_pred             ccccccceEEEEEEeccCcceeeeeeecccchHH-HHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCCCH
Q 047157          496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK-TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTL  574 (788)
Q Consensus       496 lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~gsL  574 (788)
                      ||+|.+|.||++...  ..+..+++|.+...... ..+.+.+|++.+++++|++|+++++++......++++|++++++|
T Consensus         1 l~~g~~~~v~~~~~~--~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l   78 (215)
T cd00180           1 LGEGGFGTVYLARDK--KTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL   78 (215)
T ss_pred             CCcCCceEEEEEEec--CCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence            689999999999885  45778999998765432 456899999999999999999999999999999999999999999


Q ss_pred             hHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCC-CCcEEEeecCCccccCCCCCcc
Q 047157          575 SNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDT-NYMAKISDFGISKLLNKDQTRT  653 (788)
Q Consensus       575 ~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~-~~~~kL~Dfg~a~~~~~~~~~~  653 (788)
                      .+++......+++..+..++.+++++|.+||+.   +++|+||+|.||+++     . +..++|+|||.+........ .
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~-----~~~~~~~l~d~~~~~~~~~~~~-~  149 (215)
T cd00180          79 KDLLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLD-----SDNGKVKLADFGLSKLLTSDKS-L  149 (215)
T ss_pred             HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEe-----CCCCcEEEecCCceEEccCCcc-h
Confidence            999966545688999999999999999999999   999999999999998     5 68999999999987654321 1


Q ss_pred             cccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccC
Q 047157          654 DTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSH  732 (788)
Q Consensus       654 ~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  732 (788)
                      .....+...|++||.+... ..+.+.|+|++|+++++|                                          
T Consensus       150 ~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------  187 (215)
T cd00180         150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------  187 (215)
T ss_pred             hhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------
Confidence            2234567889999999877 888999999999999999                                          


Q ss_pred             CCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          733 DPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       733 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                                 ..+.+++..|++.||++||++.++++.+
T Consensus       188 -----------~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 -----------PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             -----------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence                       3566788889999999999999998753

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.95  E-value=4e-28  Score=256.35  Aligned_cols=195  Identities=26%  Similarity=0.384  Sum_probs=166.8

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchH--------HHHHHHHHHHHHhcCCC---ccccceEeeEEec
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE--------KTNEEFMTELKIIGRTH---HKNLVRLLGFCSE  558 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~  558 (788)
                      |...+.+|.|+||.|+.++++  .+...|+||.+.+..-        ...-.+-.|+++|..++   |+||++++++|++
T Consensus       563 yttlq~lG~GAyGkV~lai~K--~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  563 YTTLQPLGEGAYGKVNLAIHK--ENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ceeeeeccccccceEEEeeec--ccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            444578999999999999998  5577999999876431        11123567999999997   9999999999999


Q ss_pred             CCeEEEEEecC-CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          559 EDKRLLVYELM-PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       559 ~~~~~lV~e~~-~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                      ++.+||+||-. ++-+|.+++.. ...+++.+...|++|++.|+++||++   +|||||||-+||.++     .++-+||
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE~-kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd-----~~g~~kl  711 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIEF-KPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVD-----SNGFVKL  711 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhhc-cCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEe-----cCCeEEE
Confidence            99999999974 46789999954 46788999999999999999999999   999999999999999     8999999


Q ss_pred             eecCCccccCCCCCcccccccCCccccCcccccCCCCC-ccCcchhhHHHHHHHHhCCCCCC
Q 047157          638 SDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT-TKVDVFSFGVMLLEIICGRRHIE  698 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~k~DVwSlGvil~elltg~~p~~  698 (788)
                      +|||.+.......   ...++||..|.|||++.+.+|- ..-|||++|++||.++....||.
T Consensus       712 idfgsaa~~ksgp---fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  712 IDFGSAAYTKSGP---FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             eeccchhhhcCCC---cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            9999998765433   3347899999999999998875 56899999999999999988875

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=9.3e-27  Score=242.14  Aligned_cols=284  Identities=23%  Similarity=0.273  Sum_probs=206.8

Q ss_pred             CcccCHHHHHH-HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC-----c---c
Q 047157          477 FREFTFQELQE-ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-----H---K  547 (788)
Q Consensus       477 ~~~~~~~~l~~-~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----h---p  547 (788)
                      .......+... +.|.+.++||-|-|++||++.+.  ...+.||+|+.+.. +...+..+.||++|++++     |   .
T Consensus        66 YHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDt--q~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~  142 (590)
T KOG1290|consen   66 YHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDT--QNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKK  142 (590)
T ss_pred             CceeeccccccCceEEEEEeccccccceeEEEeec--cCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence            44555556666 78889999999999999999987  77789999998754 455667889999999873     3   3


Q ss_pred             ccceEeeEEec----CCeEEEEEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcE
Q 047157          548 NLVRLLGFCSE----EDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNV  622 (788)
Q Consensus       548 niv~~~~~~~~----~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  622 (788)
                      .||++++.|..    +.++++|+|++ |.+|..+|... -+.++...+.+|++||+.||.|||..|  +|||-||||+||
T Consensus       143 ~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENv  219 (590)
T KOG1290|consen  143 CVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENV  219 (590)
T ss_pred             eeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCccee
Confidence            69999999965    55899999999 77888888654 456899999999999999999999986  999999999999


Q ss_pred             EeccCC--------------------------------------------------------------------------
Q 047157          623 LLDLKT--------------------------------------------------------------------------  628 (788)
Q Consensus       623 ll~~~~--------------------------------------------------------------------------  628 (788)
                      |+....                                                                          
T Consensus       220 Ll~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~  299 (590)
T KOG1290|consen  220 LLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPN  299 (590)
T ss_pred             eeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhccccccccccc
Confidence            991100                                                                          


Q ss_pred             --------------------------------------------------------------------------------
Q 047157          629 --------------------------------------------------------------------------------  628 (788)
Q Consensus       629 --------------------------------------------------------------------------------  628 (788)
                                                                                                      
T Consensus       300 ~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~  379 (590)
T KOG1290|consen  300 QESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPL  379 (590)
T ss_pred             ccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccc
Confidence                                                                                            


Q ss_pred             -------CCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccc
Q 047157          629 -------LDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSR  701 (788)
Q Consensus       629 -------~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~  701 (788)
                             ...+.++||+|||-|.-.....+    .-..|..|+|||++.+..|++.+||||++|+++||+||...|+...
T Consensus       380 v~p~~~~~~~di~vKIaDlGNACW~~khFT----~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhs  455 (590)
T KOG1290|consen  380 VNPDIPLPECDIRVKIADLGNACWVHKHFT----EDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHS  455 (590)
T ss_pred             cCCCCCCCccceeEEEeeccchhhhhhhhc----hhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCC
Confidence                   00012356666666655433322    2246788999999999999999999999999999999999998765


Q ss_pred             cccccccch-hh-----hHHHHHHHhhccc-ccccccCC--------CCC-----------cccHHHHHHHHHHHhHccC
Q 047157          702 VEEESEEVD-IV-----LSDWVISCMLSRN-LQVLVSHD--------PEV-----------LSDLERFERMAMVGLWCNH  755 (788)
Q Consensus       702 ~~~~~~~~~-~~-----~~~~~~~~~~~~~-~~~l~~~~--------~~~-----------~~~~~~~~~l~~l~~~cl~  755 (788)
                      .+......+ +.     +..........+. -++++...        +..           .-..+...++.+++.-||+
T Consensus       456 G~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLe  535 (590)
T KOG1290|consen  456 GENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLE  535 (590)
T ss_pred             CCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence            544322221 11     1111111111111 11122111        111           1134667889999999999


Q ss_pred             CCCCCCCCHHHHHHH
Q 047157          756 PDPNLRPSMKKVIHM  770 (788)
Q Consensus       756 ~dP~~RPt~~evl~~  770 (788)
                      .+|++||||.+.+++
T Consensus       536 f~PeKR~tA~~cl~h  550 (590)
T KOG1290|consen  536 FDPEKRPTAAQCLKH  550 (590)
T ss_pred             cCccccccHHHHhcC
Confidence            999999999999853

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.94  E-value=1.2e-27  Score=249.71  Aligned_cols=281  Identities=18%  Similarity=0.230  Sum_probs=212.5

Q ss_pred             CCcccCHHHHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC------cccc
Q 047157          476 NFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH------HKNL  549 (788)
Q Consensus       476 ~~~~~~~~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~------hpni  549 (788)
                      +...+.+.|+....|.+....|+|-|++|..|...  ..+..||||++... +-..+.=+.|+++|++|+      --|+
T Consensus       420 GYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~--~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hc  496 (752)
T KOG0670|consen  420 GYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQ--ARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHC  496 (752)
T ss_pred             ceEEEehhhhhcceeEEEeccccceeeeeeecccc--CCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHH
Confidence            45667888999999999999999999999999887  45559999999865 556677789999999995      3579


Q ss_pred             ceEeeEEecCCeEEEEEecCCCCCHhHhhhccCC--CCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccC
Q 047157          550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQ--RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLK  627 (788)
Q Consensus       550 v~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  627 (788)
                      ++++-.|...+++|||+|-+ ..+|.++|.+-++  .+....+..++.|+..||..|...   +|+|.||||+|||++. 
T Consensus       497 lrl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE-  571 (752)
T KOG0670|consen  497 LRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNE-  571 (752)
T ss_pred             HHHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEecc-
Confidence            99999999999999999987 5699999977654  456778889999999999999998   9999999999999983 


Q ss_pred             CCCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccc
Q 047157          628 TLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESE  707 (788)
Q Consensus       628 ~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~  707 (788)
                         ....+||+|||.|..........   ..-+.-|.|||++.+.+|+...|+||.||.||||.||+..|.+........
T Consensus       572 ---~k~iLKLCDfGSA~~~~eneitP---YLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLr  645 (752)
T KOG0670|consen  572 ---SKNILKLCDFGSASFASENEITP---YLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLR  645 (752)
T ss_pred             ---CcceeeeccCccccccccccccH---HHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHH
Confidence               56789999999998765433221   223456999999999999999999999999999999999998764332111


Q ss_pred             cc---------hhhhHHHHHHHhhc----------------------------ccccccccCCCCCc-ccHHHHHHHHHH
Q 047157          708 EV---------DIVLSDWVISCMLS----------------------------RNLQVLVSHDPEVL-SDLERFERMAMV  749 (788)
Q Consensus       708 ~~---------~~~~~~~~~~~~~~----------------------------~~~~~l~~~~~~~~-~~~~~~~~l~~l  749 (788)
                      ..         .+.-...+.....+                            ..+...+....... .+.....+|.+|
T Consensus       646 l~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdL  725 (752)
T KOG0670|consen  646 LFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDL  725 (752)
T ss_pred             HHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHH
Confidence            00         00000000000000                            00000011111111 234567789999


Q ss_pred             HhHccCCCCCCCCCHHHHHHH
Q 047157          750 GLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       750 ~~~cl~~dP~~RPt~~evl~~  770 (788)
                      +..|+..||++|.|..++|.+
T Consensus       726 Ldkml~LdP~KRit~nqAL~H  746 (752)
T KOG0670|consen  726 LDKMLILDPEKRITVNQALKH  746 (752)
T ss_pred             HHHHhccChhhcCCHHHHhcC
Confidence            999999999999999998864

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.94  E-value=3.4e-27  Score=234.02  Aligned_cols=260  Identities=23%  Similarity=0.269  Sum_probs=187.9

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecC------CeEEEE
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE------DKRLLV  565 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------~~~~lV  565 (788)
                      +.++.|.- .|..+.+.  -.+.+||+|++....  ....++..+|...+..++|+||++++.++.-.      .+.|+|
T Consensus        23 ~p~~~g~~-~v~~a~D~--v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v   99 (369)
T KOG0665|consen   23 KPIGSGAQ-IVVAAFDQ--VLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLV   99 (369)
T ss_pred             cccCCCCc-eEEecchh--hccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHH
Confidence            44666766 55555444  456689999875432  33456778999999999999999999998543      367999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+| ..+|.+.+.   ..++-..+..|+.|++.|++|||+.   +|+||||||+||++.     .+..+||.|||+++.
T Consensus       100 ~e~m-~~nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~-----~~~~lKi~dfg~ar~  167 (369)
T KOG0665|consen  100 MELM-DANLCQVIL---MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVN-----SDCTLKILDFGLART  167 (369)
T ss_pred             HHhh-hhHHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceec-----chhheeeccchhhcc
Confidence            9999 568888875   3456677889999999999999999   999999999999998     889999999999986


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchh-----------hhH
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI-----------VLS  714 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~-----------~~~  714 (788)
                      -...  ...+....|..|.|||++.+..+.+.+||||+||++.||++|+-.|.+....++......           .+.
T Consensus       168 e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~  245 (369)
T KOG0665|consen  168 EDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQ  245 (369)
T ss_pred             cCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhh
Confidence            5443  345567788999999999988899999999999999999999998876543322211100           000


Q ss_pred             HHHHHHhhc------ccccccccC---CCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          715 DWVISCMLS------RNLQVLVSH---DPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       715 ~~~~~~~~~------~~~~~l~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .-+......      -....++..   ......+......+.+++.+||-.||++|.++++++++
T Consensus       246 ~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H  310 (369)
T KOG0665|consen  246 PTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH  310 (369)
T ss_pred             HHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence            111111100      000011000   00111112234567789999999999999999999985

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.93  E-value=1.5e-25  Score=228.01  Aligned_cols=199  Identities=31%  Similarity=0.508  Sum_probs=172.3

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeecccchHH-HHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK-TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      .+.+.||+|++|.||++...  .++..+++|.+...... ..+.+.+|++.+++++|+|++++++++......++++|++
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~   79 (225)
T smart00221        2 ELGKKLGEGAFGKVYLARDK--GTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC   79 (225)
T ss_pred             ceeeEeecCCCeEEEEEEEc--CCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence            45678999999999999886  45678999999765544 6778999999999999999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++++|.+++......+++..+..++.+++.+|.+||+.   +++|+||+|+||+++     .+..++|+|||.+......
T Consensus        80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~-----~~~~~~l~d~g~~~~~~~~  151 (225)
T smart00221       80 EGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLG-----MDGLVKLADFGLARFIHRD  151 (225)
T ss_pred             CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEc-----CCCCEEEeeCceeeEecCc
Confidence            99999999966533378999999999999999999999   999999999999998     6789999999999876544


Q ss_pred             CCcccccccCCccccCcccc-cCCCCCccCcchhhHHHHHHHHhCCCCCCc
Q 047157          650 QTRTDTNMRGTMGYVAPEWL-RNVPVTTKVDVFSFGVMLLEIICGRRHIEL  699 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~-~~~~~s~k~DVwSlGvil~elltg~~p~~~  699 (788)
                      .........++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus       152 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      152 LAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            31122334577889999998 677888899999999999999999999965

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.93  E-value=4.9e-26  Score=220.23  Aligned_cols=252  Identities=19%  Similarity=0.285  Sum_probs=186.5

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeE-EecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGF-CSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~-~~~~~~~~lV~  566 (788)
                      .|.+.+.||+|.||.+.++.++  ..+..+++|.+.+. ....++|.+|..----| .|.||+.-|++ |+..+..++++
T Consensus        25 ~y~I~k~lgeG~FgkIlL~eHr--~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q  101 (378)
T KOG1345|consen   25 VYTINKQLGEGRFGKILLAEHR--QSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ  101 (378)
T ss_pred             hhhHHHHhcccceeeEEeeecc--CCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence            4677899999999999999987  77889999998765 44567899998765555 58999988874 67788889999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||++.|+|.+-+..  ..+.+....+++.|++.||.|+|++   ++||||||.+||||-..   +..++||+|||..+..
T Consensus       102 E~aP~gdL~snv~~--~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~---df~rvKlcDFG~t~k~  173 (378)
T KOG1345|consen  102 EFAPRGDLRSNVEA--AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDA---DFYRVKLCDFGLTRKV  173 (378)
T ss_pred             ccCccchhhhhcCc--ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecC---CccEEEeeeccccccc
Confidence            99999999988744  4567778889999999999999999   99999999999999643   4559999999998865


Q ss_pred             CCCCCcccccccCCccccCcccccCC-----CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNV-----PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      +..-.    ...-+..|.|||.....     ...+.+|||.||+++|.++||+.||+.....+        ...|-+..+
T Consensus       174 g~tV~----~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d--------~~Y~~~~~w  241 (378)
T KOG1345|consen  174 GTTVK----YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMD--------KPYWEWEQW  241 (378)
T ss_pred             Cceeh----hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccC--------chHHHHHHH
Confidence            43221    12345679999977432     35678999999999999999999997432211        122333333


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ..+....+.    ...  ....++++++.++-+.++|++|=-..++.+
T Consensus       242 ~~rk~~~~P----~~F--~~fs~~a~r~Fkk~lt~~~~drcki~~~kk  283 (378)
T KOG1345|consen  242 LKRKNPALP----KKF--NPFSEKALRLFKKSLTPRFKDRCKIWTAKK  283 (378)
T ss_pred             hcccCccCc----hhh--cccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence            322222111    110  112355666777889999999944444443

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.92  E-value=2.5e-26  Score=246.82  Aligned_cols=251  Identities=22%  Similarity=0.271  Sum_probs=200.3

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      |.+...+|.|.||.||+++.+  ..+...|+|.++-......+-+.+|+-+++..+||||+.+++-+...+..++.|||+
T Consensus        17 yellqrvgsgTygdvyKaRd~--~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc   94 (829)
T KOG0576|consen   17 YELLQRVGSGTYGDVYKARDK--RSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC   94 (829)
T ss_pred             hhheeeecCCcccchhhhccc--ccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence            344578999999999999887  667788999888776677778889999999999999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      .+|+|.+.-+ -...+++.++....+..++||+|||+.   +=+|||||-.|||++     +.+.+||+|||.+..+...
T Consensus        95 gggslQdiy~-~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanillt-----d~gDvklaDfgvsaqitat  165 (829)
T KOG0576|consen   95 GGGSLQDIYH-VTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLT-----DEGDVKLADFGVSAQITAT  165 (829)
T ss_pred             CCCcccceee-ecccchhHHHHHHHhhhhccchhhhcC---Ccccccccccceeec-----ccCceeecccCchhhhhhh
Confidence            9999998764 346788899999999999999999999   889999999999998     8899999999998876432


Q ss_pred             CCcccccccCCccccCcccc---cCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWL---RNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~---~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      -. ....+.||+.|||||+.   +.+.|..++|||++|+...|+---+.|......            ..+...+.....
T Consensus       166 i~-KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp------------mr~l~LmTkS~~  232 (829)
T KOG0576|consen  166 IA-KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP------------MRALFLMTKSGF  232 (829)
T ss_pred             hh-hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch------------HHHHHHhhccCC
Confidence            22 23457899999999987   566789999999999999999877665432100            001111111111


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                           ..+.........+.+.++++.|+..+|++|||++.++.
T Consensus       233 -----qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  233 -----QPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             -----CCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence                 12334444566778888999999999999999987654

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.92  E-value=2.3e-25  Score=229.47  Aligned_cols=198  Identities=23%  Similarity=0.355  Sum_probs=163.1

Q ss_pred             hcccccccccccceEEEEEEecc-CcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      +...++||.|.|++||++.+... .....||+|.+....  .-.++.+|++.|..+ .|.||+++.+++..++...+|+|
T Consensus        38 ~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp  115 (418)
T KOG1167|consen   38 YKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLP  115 (418)
T ss_pred             hhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEec
Confidence            44468899999999999988741 256689999986543  234688999999998 59999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |++.....++.    ..++..++..+++.++.||.++|.+   |||||||||+|+|.+.    ....-.|.|||+|....
T Consensus       116 ~~~H~~f~~l~----~~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~----~t~rg~LvDFgLA~~~d  184 (418)
T KOG1167|consen  116 YFEHDRFRDLY----RSLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNR----RTQRGVLVDFGLAQRYD  184 (418)
T ss_pred             ccCccCHHHHH----hcCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCcccccccc----ccCCceEEechhHHHHH
Confidence            99999999888    4466888999999999999999999   9999999999999984    44677899999998210


Q ss_pred             C-------------CC------------------------------CcccccccCCccccCcccccC-CCCCccCcchhh
Q 047157          648 K-------------DQ------------------------------TRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSF  683 (788)
Q Consensus       648 ~-------------~~------------------------------~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSl  683 (788)
                      .             ..                              ........||++|.|||++.. ...++++||||.
T Consensus       185 ~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~  264 (418)
T KOG1167|consen  185 GYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSA  264 (418)
T ss_pred             hhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeec
Confidence            0             00                              001123469999999999865 457889999999


Q ss_pred             HHHHHHHHhCCCCCCcc
Q 047157          684 GVMLLEIICGRRHIELS  700 (788)
Q Consensus       684 Gvil~elltg~~p~~~~  700 (788)
                      |||++-+++++.||...
T Consensus       265 GVI~Lslls~~~PFf~a  281 (418)
T KOG1167|consen  265 GVILLSLLSRRYPFFKA  281 (418)
T ss_pred             cceeehhhccccccccC
Confidence            99999999999999654

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.91  E-value=3.3e-25  Score=266.70  Aligned_cols=201  Identities=20%  Similarity=0.278  Sum_probs=142.6

Q ss_pred             CCCc-cccceEeeEE-------ecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEe
Q 047157          543 RTHH-KNLVRLLGFC-------SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIH  614 (788)
Q Consensus       543 ~l~h-pniv~~~~~~-------~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH  614 (788)
                      .++| +||++++++|       .+.+..++++|++ +++|.++|......+++.+++.++.||++||.|||++   +|+|
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---gIvH  103 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQ---GIVV  103 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhC---Ceee
Confidence            4456 6888888877       2334567888987 6699999976666789999999999999999999999   9999


Q ss_pred             cCCCCCcEEeccCC--------------CCCCCcEEEeecCCccccCCCCC---------------cccccccCCccccC
Q 047157          615 CDIKPQNVLLDLKT--------------LDTNYMAKISDFGISKLLNKDQT---------------RTDTNMRGTMGYVA  665 (788)
Q Consensus       615 ~dlkp~NIll~~~~--------------~~~~~~~kL~Dfg~a~~~~~~~~---------------~~~~~~~gt~~y~a  665 (788)
                      |||||+||||+..+              ...+..+||+|||+++.......               .......||+.|+|
T Consensus       104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A  183 (793)
T PLN00181        104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS  183 (793)
T ss_pred             ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence            99999999996211              01345677777777764321000               00111357888999


Q ss_pred             cccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHH
Q 047157          666 PEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFER  745 (788)
Q Consensus       666 PE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  745 (788)
                      ||++.+..++.++|||||||+||||++|..|+.....         ......     ...    +  .+.   ......+
T Consensus       184 PE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---------~~~~~~-----~~~----~--~~~---~~~~~~~  240 (793)
T PLN00181        184 PEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---------TMSSLR-----HRV----L--PPQ---ILLNWPK  240 (793)
T ss_pred             hhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---------HHHHHH-----Hhh----c--Chh---hhhcCHH
Confidence            9999999999999999999999999998887642210         000000     000    0  000   0111234


Q ss_pred             HHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          746 MAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       746 l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ...++.+||++||.+||+|.||+++
T Consensus       241 ~~~~~~~~L~~~P~~Rps~~eil~h  265 (793)
T PLN00181        241 EASFCLWLLHPEPSCRPSMSELLQS  265 (793)
T ss_pred             HHHHHHHhCCCChhhCcChHHHhhc
Confidence            5678889999999999999999863

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=99.91  E-value=6.1e-24  Score=191.33  Aligned_cols=106  Identities=29%  Similarity=0.558  Sum_probs=93.7

Q ss_pred             CCCeeecCCCeEEEeeeecCCCc-eEEEEEeCCCCCCeEEEEecCCCCCCCCcEEEEecCCceEEEeCCCcEEEEeccc-
Q 047157           38 SNTSWLSPSGDFAFGFYSLFGGL-YLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSGA-  115 (788)
Q Consensus        38 ~~~~~vS~~g~F~lGFf~~~~~~-~y~giw~~~~~~~tvVWvANr~~p~~~~s~l~l~~~G~L~l~~~~~~~~~~~s~~-  115 (788)
                      .+++|+|++|.|++|||++.... .+.+|||.+++ +++||+||++.|....++|.|..||+|+|.|.+|.+.|.+.+. 
T Consensus         6 ~~~~l~s~~~~f~~G~~~~~~q~~dgnlv~~~~~~-~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~~~~   84 (116)
T cd00028           6 SGQTLVSSGSLFELGFFKLIMQSRDYNLILYKGSS-RTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGSGTVVWSSNTTR   84 (116)
T ss_pred             CCCEEEeCCCcEEEecccCCCCCCeEEEEEEeCCC-CeEEEECCCCCCCCCCEEEEEecCCCeEEEcCCCcEEEEecccC
Confidence            34789999999999999998776 99999999887 8999999999997777899999999999999888765544432 


Q ss_pred             ---ccccccCCCCcEEEEecCCceeecccCCC
Q 047157          116 ---ASLALMQNDGNFVLKNANSAVVWDSFDFP  144 (788)
Q Consensus       116 ---~~~a~LldsGNlVl~~~~~~~lWqSFD~P  144 (788)
                         ..+++|+|+|||||++.++.++|||||||
T Consensus        85 ~~~~~~~~L~ddGnlvl~~~~~~~~W~Sf~~P  116 (116)
T cd00028          85 VNGNYVLVLLDDGNLVLYDSDGNFLWQSFDYP  116 (116)
T ss_pred             CCCceEEEEeCCCCEEEECCCCCEEEcCCCCC
Confidence               34689999999999999999999999999

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=99.90  E-value=8.5e-25  Score=194.82  Aligned_cols=99  Identities=41%  Similarity=0.670  Sum_probs=67.8

Q ss_pred             CCeEEEEecCCCCCC---CCcEEEEecCCceEEEeCCCcEEEEe-cc-----cccccccCCCCcEEEEecCCceeecccC
Q 047157           72 EKTLVWAADRDSPAE---AGSKITLTNDGKLLLTYFNGSVQQIY-SG-----AASLALMQNDGNFVLKNANSAVVWDSFD  142 (788)
Q Consensus        72 ~~tvVWvANr~~p~~---~~s~l~l~~~G~L~l~~~~~~~~~~~-s~-----~~~~a~LldsGNlVl~~~~~~~lWqSFD  142 (788)
                      ++||||+|||++|+.   ...+|.|..||||+|.+.+++..|.. .+     ....|.|+|+|||||++..+.++|||||
T Consensus         1 ~~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~Sf~   80 (114)
T PF01453_consen    1 PRTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQSFD   80 (114)
T ss_dssp             ---------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEESTT
T ss_pred             CcccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEeecC
Confidence            479999999999993   34789999999999999887764443 21     1467999999999999999999999999


Q ss_pred             CCCCcccCCccccCCCe------EEeecCCCCCCC
Q 047157          143 FPTDTILPGQVLLTGKK------LYSNSRGTADYS  171 (788)
Q Consensus       143 ~PtDtllpg~~l~~g~~------l~s~~~~~~dps  171 (788)
                      |||||+||||+|+.|..      +.+ |++.+|||
T Consensus        81 ~ptdt~L~~q~l~~~~~~~~~~~~~s-w~s~~dps  114 (114)
T PF01453_consen   81 YPTDTLLPGQKLGDGNVTGKNDSLTS-WSSNTDPS  114 (114)
T ss_dssp             SSS-EEEEEET--TSEEEEESTSSEE-EESS----
T ss_pred             CCccEEEeccCcccCCCccccceEEe-ECCCCCCC
Confidence            99999999999987553      344 47888886

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.90  E-value=1e-23  Score=206.30  Aligned_cols=166  Identities=21%  Similarity=0.206  Sum_probs=126.1

Q ss_pred             CCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCC
Q 047157          572 GTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT  651 (788)
Q Consensus       572 gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~  651 (788)
                      |+|.+++...+..+++.+++.++.||+.||.|||++   +      ||+|||++     .++.+|+  ||++....... 
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~-----~~~~~~~--fG~~~~~~~~~-   63 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLT-----WDGLLKL--DGSVAFKTPEQ-   63 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEc-----Cccceee--ccceEeecccc-
Confidence            689999987677899999999999999999999998   4      99999998     7888999  99988654322 


Q ss_pred             cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccccc
Q 047157          652 RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVS  731 (788)
Q Consensus       652 ~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  731 (788)
                           ..|++.|+|||++.+..++.++|||||||++|||++|+.||.......      ..+.... .....        
T Consensus        64 -----~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~------~~~~~~~-~~~~~--------  123 (176)
T smart00750       64 -----SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS------AILEILL-NGMPA--------  123 (176)
T ss_pred             -----CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc------HHHHHHH-HHhcc--------
Confidence                 257899999999999999999999999999999999999986432111      0011111 00000        


Q ss_pred             CCCCC-cccHHHH--HHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          732 HDPEV-LSDLERF--ERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       732 ~~~~~-~~~~~~~--~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      ..+.. .......  .++.+++.+||+.||++||++.|+++++...
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      124 DDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             CCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence            00110 1111222  2689999999999999999999999988643

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=99.89  E-value=4.8e-23  Score=185.03  Aligned_cols=105  Identities=29%  Similarity=0.534  Sum_probs=92.9

Q ss_pred             CCCeeecCCCeEEEeeeecCCCceEEEEEeCCCCCCeEEEEecCCCCCCCCcEEEEecCCceEEEeCCCcEEEEeccc--
Q 047157           38 SNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSGA--  115 (788)
Q Consensus        38 ~~~~~vS~~g~F~lGFf~~~~~~~y~giw~~~~~~~tvVWvANr~~p~~~~s~l~l~~~G~L~l~~~~~~~~~~~s~~--  115 (788)
                      .+++|+|++|.|++|||.+.....+.+|||++.+ +++||+|||+.|+..++.|.|..||+|+|.+.+|.+.|...+.  
T Consensus         6 ~~~~l~s~~~~f~~G~~~~~~q~dgnlV~~~~~~-~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~t~~~   84 (114)
T smart00108        6 SGQTLVSGNSLFELGFFTLIMQNDYNLILYKSSS-RTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGDGRVVWSSNTTGA   84 (114)
T ss_pred             CCCEEecCCCcEeeeccccCCCCCEEEEEEECCC-CcEEEECCCCCCCCCCEEEEEeCCCCEEEEeCCCCEEEEecccCC
Confidence            4578999999999999999877899999999987 8999999999999777899999999999999888765544433  


Q ss_pred             --ccccccCCCCcEEEEecCCceeecccCC
Q 047157          116 --ASLALMQNDGNFVLKNANSAVVWDSFDF  143 (788)
Q Consensus       116 --~~~a~LldsGNlVl~~~~~~~lWqSFD~  143 (788)
                        ..+++|+|+|||||++..+.++||||||
T Consensus        85 ~~~~~~~L~ddGnlvl~~~~~~~~W~Sf~~  114 (114)
T smart00108       85 NGNYVLVLLDDGNLVIYDSDGNFLWQSFDY  114 (114)
T ss_pred             CCceEEEEeCCCCEEEECCCCCEEeCCCCC
Confidence              3478999999999999999999999997

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.87  E-value=8.9e-22  Score=210.69  Aligned_cols=173  Identities=19%  Similarity=0.154  Sum_probs=131.3

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccc-----hHHHHHHHHHHHHHhcCCCccccce-EeeEEecCCe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-----IEKTNEEFMTELKIIGRTHHKNLVR-LLGFCSEEDK  561 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~-----~~~~~~~~~~E~~~l~~l~hpniv~-~~~~~~~~~~  561 (788)
                      ..|.+.+.||+|+||+||+|.+... ++..+|||++...     .....+.+.+|++++++++|+|+++ +++    .+.
T Consensus        18 ~~Y~~~~~IG~G~fg~Vy~a~~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~----~~~   92 (365)
T PRK09188         18 ARFVETAVLKRDVFSTVERGYFAGD-PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA----TGK   92 (365)
T ss_pred             CCceEccEEeecCcEEEEEEEEcCC-CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----cCC
Confidence            3467789999999999999987521 4556899986532     1234567999999999999999985 443    246


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCC-CCCcEEeccCCCCCCCcEEEeec
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDI-KPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dl-kp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      .++||||+++++|... ...    .   ...++.|++++|.|||++   +|+|||| ||+|||++     .++.+||+||
T Consensus        93 ~~LVmE~~~G~~L~~~-~~~----~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~-----~~~~ikLiDF  156 (365)
T PRK09188         93 DGLVRGWTEGVPLHLA-RPH----G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMG-----PDGEAAVIDF  156 (365)
T ss_pred             cEEEEEccCCCCHHHh-Ccc----c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEc-----CCCCEEEEEC
Confidence            7999999999999732 111    1   146789999999999999   9999999 99999998     6778999999


Q ss_pred             CCccccCCCCCcc-------cccccCCccccCcccccCCC------CCccCcch
Q 047157          641 GISKLLNKDQTRT-------DTNMRGTMGYVAPEWLRNVP------VTTKVDVF  681 (788)
Q Consensus       641 g~a~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~------~s~k~DVw  681 (788)
                      |+++.+.......       .....+++.|+|||.+...+      .+..+|-|
T Consensus       157 GlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW  210 (365)
T PRK09188        157 QLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW  210 (365)
T ss_pred             ccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence            9999775543211       13466888999999985432      33446666

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.87  E-value=2.7e-21  Score=207.85  Aligned_cols=265  Identities=21%  Similarity=0.254  Sum_probs=192.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCc----cccceEeeEE-ecCCeEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHH----KNLVRLLGFC-SEEDKRL  563 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h----pniv~~~~~~-~~~~~~~  563 (788)
                      .|.+.++||+|+||.||.+...... ...+|+|............+..|..++..+.+    +++.++++.. ..+...+
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~-~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~   97 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEK-NKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNF   97 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCC-CeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeE
Confidence            5677899999999999999876333 45788887765433322367788888888863    6899999988 5778899


Q ss_pred             EEEecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          564 LVYELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      +||+.+ |.+|.++..... +.++..+.+.|+.|++.+|.+||+.   |++||||||+|+++..........+.|.|||+
T Consensus        98 iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl  173 (322)
T KOG1164|consen   98 IVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL  173 (322)
T ss_pred             EEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence            999998 889999886554 7899999999999999999999999   99999999999999843211236799999999


Q ss_pred             cc--ccCCCCC------cc-cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh
Q 047157          643 SK--LLNKDQT------RT-DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL  713 (788)
Q Consensus       643 a~--~~~~~~~------~~-~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~  713 (788)
                      ++  .......      .. .....||..|+++....+.+.+.+.|+||++.++.|++.|..||..........    ..
T Consensus       174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~----~~  249 (322)
T KOG1164|consen  174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKS----KF  249 (322)
T ss_pred             CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHH----HH
Confidence            98  3322111      11 234569999999999999999999999999999999999999996543221111    00


Q ss_pred             HHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          714 SDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       714 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      .......        ....     ........+.++...+-..+..++|....+...|+...
T Consensus       250 ~~~~~~~--------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~  298 (322)
T KOG1164|consen  250 EKDPRKL--------LTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVF  298 (322)
T ss_pred             HHHhhhh--------cccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHH
Confidence            0100000        0000     00111233444444455578999999999998886554

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.86  E-value=1.8e-22  Score=195.23  Aligned_cols=247  Identities=23%  Similarity=0.365  Sum_probs=185.2

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeeccc--chHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      ++..+|...-.|..|+|++.  +  ..+++|++.-  -.....++|..|.-.|+.+.||||+.+++.|.......++..|
T Consensus       193 nl~tkl~e~hsgelwrgrwq--g--ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~  268 (448)
T KOG0195|consen  193 NLITKLAESHSGELWRGRWQ--G--NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQY  268 (448)
T ss_pred             hhhhhhccCCCccccccccc--C--cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeee
Confidence            34567888899999999985  2  2566666642  2344456888999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCC-CCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEe--ecCCccc
Q 047157          569 MPNGTLSNFLFHEGQ-RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS--DFGISKL  645 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~--Dfg~a~~  645 (788)
                      |+.|+|...|+.... ..+..+..+++.+|++|++|||+. .+-|..--|....+++|     ++.+++|+  |--++  
T Consensus       269 mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmid-----edltarismad~kfs--  340 (448)
T KOG0195|consen  269 MPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMID-----EDLTARISMADTKFS--  340 (448)
T ss_pred             ccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEec-----chhhhheecccceee--
Confidence            999999999976533 347788899999999999999996 33344456889999999     77777764  22111  


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCC---ccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVT---TKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s---~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                            .......-.+.||+||.++.++-+   .++|+|||.++||||.|...||......+...+..            
T Consensus       341 ------fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia------------  402 (448)
T KOG0195|consen  341 ------FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA------------  402 (448)
T ss_pred             ------eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh------------
Confidence                  111223346889999999877654   47999999999999999999997654433221110            


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                         +     .......+......+.+++.-|+.+||.+||.+..|+-.||++.
T Consensus       403 ---l-----eglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  403 ---L-----EGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             ---h-----ccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence               0     01122223344566778888899999999999999999998764

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=99.85  E-value=1.7e-21  Score=173.28  Aligned_cols=107  Identities=27%  Similarity=0.653  Sum_probs=85.0

Q ss_pred             cccCcccccceeeeecc---ceeEEEEecCCcceEEEEeeccCCCCceEEEEEEeCCccEEEEEeecCCCCceeEEeecc
Q 047157          198 WYTGTVTLNNVSLIFNQ---SAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAV  274 (788)
Q Consensus       198 w~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~ld~~G~l~~~~w~~~~~~~W~~~~~~p  274 (788)
                      |++|+|++..++.+..+   ..+.+.|..+.++.+..+.   ..+.+.++|++||.+|+++++.|.+ ..+.|..+|++|
T Consensus         1 wrsG~WnG~~f~g~p~~~~~~~~~~~fv~~~~e~~~t~~---~~~~s~~~r~~ld~~G~l~~~~w~~-~~~~W~~~~~~p   76 (110)
T PF00954_consen    1 WRSGPWNGQRFSGIPEMSSNSLYNYSFVSNNEEVYYTYS---LSNSSVLSRLVLDSDGQLQRYIWNE-STQSWSVFWSAP   76 (110)
T ss_pred             CCccccCCeEECCcccccccceeEEEEEECCCeEEEEEe---cCCCceEEEEEEeeeeEEEEEEEec-CCCcEEEEEEec
Confidence            78888888777665543   3445556666655554432   2346789999999999999999976 468899999999


Q ss_pred             ccccccCCCCCCCcccccCCCCCcccCCCCCCccCC
Q 047157          275 NDPCIVNCICGVYGMCTSSDNETVTCNCIPGYTPLN  310 (788)
Q Consensus       275 ~~~C~~~~~CG~~g~C~~~~~~~~~C~C~~GF~~~~  310 (788)
                      .|+||+|+.||+||+|+.  +..|.|+||+||+|++
T Consensus        77 ~d~Cd~y~~CG~~g~C~~--~~~~~C~Cl~GF~P~n  110 (110)
T PF00954_consen   77 KDQCDVYGFCGPNGICNS--NNSPKCSCLPGFEPKN  110 (110)
T ss_pred             ccCCCCccccCCccEeCC--CCCCceECCCCcCCCc
Confidence            999999999999999964  5678899999999975

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.84  E-value=9.6e-21  Score=188.78  Aligned_cols=207  Identities=20%  Similarity=0.269  Sum_probs=179.5

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .|++.++||.|.||.++.|..-  -++++||||.-...+  ...++..|.+..+.| ..+.|..++-|-.++.+-.||+|
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl--~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid  104 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNL--YNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID  104 (449)
T ss_pred             cceeccccccCcceeeeccccc--ccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence            4667899999999999999876  567799999865433  234667888888887 47999999999899999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      .+ |.||+++..-.+++++.+++..+|.|++.-++|+|++   .+|.|||||+|+||..........+.|+|||+|+...
T Consensus       105 LL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr  180 (449)
T KOG1165|consen  105 LL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR  180 (449)
T ss_pred             hh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence            98 8999999988899999999999999999999999999   9999999999999987776677889999999999876


Q ss_pred             CCCCc------ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccc
Q 047157          648 KDQTR------TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVE  703 (788)
Q Consensus       648 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~  703 (788)
                      ...+.      ......||.+||+--...+.+.+.+.|+-|||-++.+.|-|..||.+....
T Consensus       181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~  242 (449)
T KOG1165|consen  181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD  242 (449)
T ss_pred             CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc
Confidence            54432      234467999999999999999999999999999999999999999876443

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.84  E-value=7e-21  Score=181.70  Aligned_cols=209  Identities=22%  Similarity=0.313  Sum_probs=177.0

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCc-cccceEeeEEecCCeEE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHH-KNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~~  563 (788)
                      |....|.+.++||.|+||.+|.|...  ..+..||||.-+...  ...++.-|..+...|+| ..|+.+..+..+...-.
T Consensus        12 iv~gky~lvrkiGsGSFGdIy~~~~i--~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynv   87 (341)
T KOG1163|consen   12 IVGGKYKLVRKIGSGSFGDIYLGISI--TSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNV   87 (341)
T ss_pred             eeccceEEEEeecCCchhheeeeeec--cCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccce
Confidence            44556788899999999999999887  677899999876543  23467788899988865 77888888899999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +|||.. |.+|+++..-..+.++..+.+-++-|++.-++|+|.+   +++||||||+|+|..-..  ....+.|+|||++
T Consensus        88 lVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgr--h~~kl~LIDFGLa  161 (341)
T KOG1163|consen   88 LVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGR--HCNKLYLIDFGLA  161 (341)
T ss_pred             eeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeecccc--ccceEEEEeccch
Confidence            999998 8999999977788999999999999999999999999   999999999999997443  4568999999999


Q ss_pred             cccCCCCC------cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccc
Q 047157          644 KLLNKDQT------RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVE  703 (788)
Q Consensus       644 ~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~  703 (788)
                      +......+      ....+..||..|.+--...+...+.+.|+-|+|.+|..+.-|..||++....
T Consensus       162 Kky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~  227 (341)
T KOG1163|consen  162 KKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA  227 (341)
T ss_pred             hhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh
Confidence            97743322      2234567999999998888888899999999999999999999999876443

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.84  E-value=1.5e-21  Score=222.60  Aligned_cols=252  Identities=21%  Similarity=0.281  Sum_probs=184.5

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeec-----ccchHH-HHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKL-----EKDIEK-TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l-----~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .+++|.|++|.|+......  .....+.|..     ...... ....+..|+-+-..++|||++..+..+.+.....-+|
T Consensus       323 ~~~~g~ga~g~~~~~~~~~--~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  323 GRVLGSGAYGSVRIAKRRS--DLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             cceeeecccCceEEEEecC--CCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence            4689999999777766542  2222233322     111111 1223677888888999999998888887777777779


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++ +|..++... ..+...++..++.|++.|+.|||+.   +|.|||||++|+++.     .++.+||+|||.+..+
T Consensus       401 E~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~-----~~g~lki~Dfg~~~vf  470 (601)
T KOG0590|consen  401 EYCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVT-----ENGILKIIDFGAASVF  470 (601)
T ss_pred             hcccH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEe-----cCCceEEeecCcceee
Confidence            99999 999998544 4678888899999999999999999   999999999999998     8889999999999877


Q ss_pred             CCCCC---cccccccCCccccCcccccCCCCCc-cCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          647 NKDQT---RTDTNMRGTMGYVAPEWLRNVPVTT-KVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       647 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~s~-k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      .....   ......+|+..|+|||.+.+.+|.+ ..||||.|+++..|++|+.||......+.....           ..
T Consensus       471 ~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~-----------~~  539 (601)
T KOG0590|consen  471 RYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT-----------NN  539 (601)
T ss_pred             ccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh-----------hc
Confidence            55443   3445678999999999999999987 599999999999999999999765433321100           00


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ...-....  ............+...++.+||+.||.+|.|+++|++
T Consensus       540 ~~~~~~~~--~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  540 YSDQRNIF--EGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             cccccccc--cChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            00000000  0000011233456678999999999999999999985

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.83  E-value=3.1e-19  Score=191.94  Aligned_cols=259  Identities=28%  Similarity=0.381  Sum_probs=194.1

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchHH---HHHHHHHHHHHhcCCCcc-ccceEeeEEecCCeEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK---TNEEFMTELKIIGRTHHK-NLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~hp-niv~~~~~~~~~~~~~lV  565 (788)
                      +.+.+.||.|+|+.||++...     ..+++|.+......   ....+.+|+.+++.+.|+ +|+++.+++......+++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~   76 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR-----KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLV   76 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec-----cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEE
Confidence            445678999999999999874     57888888654432   467899999999999988 799999999887788999


Q ss_pred             EecCCCCCHhHhhhccC--CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCC-cEEEeecCC
Q 047157          566 YELMPNGTLSNFLFHEG--QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNY-MAKISDFGI  642 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~-~~kL~Dfg~  642 (788)
                      ++++.+++|.+++....  ..+.......++.|++.++.|+|..   +++|||+||+||+++     ... .++++|||.
T Consensus        77 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~-----~~~~~~~l~dfg~  148 (384)
T COG0515          77 MEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLD-----RDGRVVKLIDFGL  148 (384)
T ss_pred             EecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeec-----CCCCeEEEeccCc
Confidence            99999999997775544  2688899999999999999999999   999999999999998     555 799999999


Q ss_pred             ccccCCCCCc-----ccccccCCccccCcccccC---CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhH
Q 047157          643 SKLLNKDQTR-----TDTNMRGTMGYVAPEWLRN---VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS  714 (788)
Q Consensus       643 a~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~---~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~  714 (788)
                      +.........     ......++..|+|||.+.+   ...+...|+||+|++++++++|..||.......        ..
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~--------~~  220 (384)
T COG0515         149 AKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSS--------AT  220 (384)
T ss_pred             ceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccc--------cH
Confidence            9865443322     2345779999999999987   678899999999999999999999976543210        00


Q ss_pred             HHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          715 DWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       715 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ................ ..............+.+++..++..+|..|.++.+....
T Consensus       221 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         221 SQTLKIILELPTPSLA-SPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             HHHHHHHHhcCCcccc-cccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            0011111111100000 000000002223567778888999999999999887764

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.80  E-value=2.2e-19  Score=195.38  Aligned_cols=217  Identities=24%  Similarity=0.424  Sum_probs=166.1

Q ss_pred             hcCCCccccceEeeEEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCce-EecCCCC
Q 047157          541 IGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQI-IHCDIKP  619 (788)
Q Consensus       541 l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~i-vH~dlkp  619 (788)
                      |+.+.|.|+.+++|.+.++...++|.+|+..|+|.+.+......+++.....++++|+.||.|||..   +| .|+.+++
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l~s   77 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGALKS   77 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeeecc
Confidence            4678999999999999999999999999999999999988888899999999999999999999987   55 9999999


Q ss_pred             CcEEeccCCCCCCCcEEEeecCCccccCCC-CCcccccccCCccccCcccccCC-------CCCccCcchhhHHHHHHHH
Q 047157          620 QNVLLDLKTLDTNYMAKISDFGISKLLNKD-QTRTDTNMRGTMGYVAPEWLRNV-------PVTTKVDVFSFGVMLLEII  691 (788)
Q Consensus       620 ~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~-------~~s~k~DVwSlGvil~ell  691 (788)
                      .|.++|     ....+||+|||+....... .........-..-|.|||.+...       ..+.+.||||||++++|++
T Consensus        78 ~nClvd-----~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~  152 (484)
T KOG1023|consen   78 SNCLVD-----SRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEIL  152 (484)
T ss_pred             ccceee-----eeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHH
Confidence            999999     9999999999998876431 11111112234579999998653       2577899999999999999


Q ss_pred             hCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          692 CGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       692 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                      +.+.||..........    .+...+    .. .....+  +|......+..+.+..++..||..+|++||++++|-..+
T Consensus       153 ~r~~~~~~~~~~~~~~----eii~~~----~~-~~~~~~--rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~  221 (484)
T KOG1023|consen  153 FRSGPFDLRNLVEDPD----EIILRV----KK-GGSNPF--RPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKL  221 (484)
T ss_pred             hccCccccccccCChH----HHHHHH----Hh-cCCCCc--CcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhh
Confidence            9999998643322210    111111    11 111111  122221224445788999999999999999999999988


Q ss_pred             hcCcC
Q 047157          772 EGTLE  776 (788)
Q Consensus       772 ~~~~~  776 (788)
                      +.+..
T Consensus       222 ~~~~~  226 (484)
T KOG1023|consen  222 LTINK  226 (484)
T ss_pred             hhhcc
Confidence            76654

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.79  E-value=2.7e-19  Score=178.05  Aligned_cols=175  Identities=13%  Similarity=0.122  Sum_probs=133.0

Q ss_pred             HHHHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHH---H------HHHHHHHhcCCCccccceE
Q 047157          482 FQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNE---E------FMTELKIIGRTHHKNLVRL  552 (788)
Q Consensus       482 ~~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~---~------~~~E~~~l~~l~hpniv~~  552 (788)
                      .+++....|+..++||.|+||.||+...    +...+++|.+........+   .      +.+|++.+.+++|++|..+
T Consensus        25 ~~~~l~~~y~~~~~l~~~~f~~v~l~~~----~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~  100 (232)
T PRK10359         25 FDDFLSYNIKTIKVFRNIDDTKVSLIDT----DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASL  100 (232)
T ss_pred             HHHHhhCceEEEEEecCCCceEEEEEec----CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcc
Confidence            3456677888889999999999998543    3447999999644322222   2      6899999999999999999


Q ss_pred             eeEEecC--------CeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEe
Q 047157          553 LGFCSEE--------DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLL  624 (788)
Q Consensus       553 ~~~~~~~--------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll  624 (788)
                      .+++...        ...+|||||++|.+|.++..     .+.    ....+++.+|..||+.   +++|||+||+||++
T Consensus       101 ~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili  168 (232)
T PRK10359        101 NDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIV  168 (232)
T ss_pred             eEeeeecccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEE
Confidence            9886543        35789999999999988741     222    3456999999999999   99999999999999


Q ss_pred             ccCCCCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHH
Q 047157          625 DLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII  691 (788)
Q Consensus       625 ~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ell  691 (788)
                      +     +++ ++|+|||.......+....             .+.....+..++|+|+||+.+..+.
T Consensus       169 ~-----~~g-i~liDfg~~~~~~e~~a~d-------------~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        169 S-----KNG-LRIIDLSGKRCTAQRKAKD-------------RIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             e-----CCC-EEEEECCCcccccchhhHH-------------HHHHHhHhcccccccceeEeehHHH
Confidence            8     566 9999999887543221111             1334445667999999999887664

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.78  E-value=3.5e-20  Score=209.84  Aligned_cols=251  Identities=21%  Similarity=0.217  Sum_probs=175.4

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHH---HHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTN---EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~---~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      .+.+.+.||++.|=+|.++++.   .| .|+||++-+.. .-..   ++-..|++ ...++|||.+.+.-+...+...||
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~---eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAyl   98 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDR---EG-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYL   98 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCC---Cc-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHH
Confidence            3556789999999999999874   55 47788774433 2222   23334444 556689999999888778888889


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |-+|.. -+|.|.|..+ ..+...+...|+.|++.||..+|..   +|+|||||.+||||+     .-.-+.|+||..-+
T Consensus        99 vRqyvk-hnLyDRlSTR-PFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiT-----SWNW~~LtDFAsFK  168 (1431)
T KOG1240|consen   99 VRQYVK-HNLYDRLSTR-PFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILIT-----SWNWLYLTDFASFK  168 (1431)
T ss_pred             HHHHHh-hhhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEe-----eechhhhhcccccC
Confidence            888884 4888877333 4567778888999999999999999   999999999999998     77789999998765


Q ss_pred             cc--CCCCCcccc----cccCCccccCcccccC----------CC-CCccCcchhhHHHHHHHHh-CCCCCCcccccccc
Q 047157          645 LL--NKDQTRTDT----NMRGTMGYVAPEWLRN----------VP-VTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEES  706 (788)
Q Consensus       645 ~~--~~~~~~~~~----~~~gt~~y~aPE~~~~----------~~-~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~  706 (788)
                      ..  ..+......    +...-..|+|||.+..          .. .+++.||||+||++.||++ |++||+....-.-.
T Consensus       169 PtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr  248 (1431)
T KOG1240|consen  169 PTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYR  248 (1431)
T ss_pred             CccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHh
Confidence            32  222221111    1223347999998743          12 6789999999999999987 57778654221111


Q ss_pred             ccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          707 EEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       707 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ... ....            +.++.        .-+...+.++++.|++.||++|.++++.++.-.+..
T Consensus       249 ~~~-~~~~------------e~~Le--------~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~  296 (1431)
T KOG1240|consen  249 SGN-ADDP------------EQLLE--------KIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGLV  296 (1431)
T ss_pred             ccC-ccCH------------HHHHH--------hCcCccHHHHHHHHHccCchhccCHHHHHHhhhccc
Confidence            100 0000            00000        001125677889999999999999999999866643

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.76  E-value=2e-18  Score=170.15  Aligned_cols=140  Identities=17%  Similarity=0.144  Sum_probs=106.7

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccchHH--H------------------------HHHHHHHHHHhcCCCc
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK--T------------------------NEEFMTELKIIGRTHH  546 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~--~------------------------~~~~~~E~~~l~~l~h  546 (788)
                      ...||+|++|.||+|...   ++..||||.++.....  .                        ......|++.+.++.|
T Consensus         2 ~~~ig~G~~~~Vy~a~~~---~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~   78 (190)
T cd05147           2 NGCISTGKEANVYHATTA---NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVT   78 (190)
T ss_pred             CCccccccceEEEEEECC---CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            357999999999999874   5679999998654211  0                        1123459999999988


Q ss_pred             cccceEeeEEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHh-hhccCCceEecCCCCCcEEec
Q 047157          547 KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYL-HEECETQIIHCDIKPQNVLLD  625 (788)
Q Consensus       547 pniv~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L-H~~~~~~ivH~dlkp~NIll~  625 (788)
                      +++.....+..  ...+|||||+++++|...... ...++......++.|++.+|.+| |+.   +|+||||||+|||++
T Consensus        79 ~~v~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~  152 (190)
T cd05147          79 AGIPCPEPILL--KSHVLVMEFIGDDGWAAPRLK-DAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH  152 (190)
T ss_pred             CCCCCCcEEEe--cCCEEEEEEeCCCCCcchhhh-cCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE
Confidence            77644333222  223899999998877655322 35678889999999999999999 687   999999999999996


Q ss_pred             cCCCCCCCcEEEeecCCccccC
Q 047157          626 LKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       626 ~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                           + +.++|+|||++....
T Consensus       153 -----~-~~v~LiDFG~a~~~~  168 (190)
T cd05147         153 -----D-GKLYIIDVSQSVEHD  168 (190)
T ss_pred             -----C-CcEEEEEccccccCC
Confidence                 2 579999999997543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.74  E-value=7.7e-18  Score=172.67  Aligned_cols=228  Identities=22%  Similarity=0.274  Sum_probs=147.3

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeeccc---chHHHHHHHHHHHHHhcCCC----------ccccceEeeEEe--
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK---DIEKTNEEFMTELKIIGRTH----------HKNLVRLLGFCS--  557 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~---~~~~~~~~~~~E~~~l~~l~----------hpniv~~~~~~~--  557 (788)
                      .+.||.|+++.||.+++.  .+++++++|....   ......+++++|.-....+.          |-.++.-++...  
T Consensus        17 ~~~i~~g~~~~v~~v~d~--~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~   94 (288)
T PF14531_consen   17 GRIIGKGGFSIVFEVTDV--ETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP   94 (288)
T ss_dssp             EEEEEEETTEEEEEEEET--TTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred             ccccccCCceEEEEEEEc--cCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence            578999999999999987  7788999997642   22345667777776555543          222332233221  


Q ss_pred             -------cC---C-----eEEEEEecCCCCCHhHhhh---ccCCC---CCHHHHHHHHHHHHHHHHHhhhccCCceEecC
Q 047157          558 -------EE---D-----KRLLVYELMPNGTLSNFLF---HEGQR---PGWVQRVEIALGVARGLLYLHEECETQIIHCD  616 (788)
Q Consensus       558 -------~~---~-----~~~lV~e~~~~gsL~~~l~---~~~~~---~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~d  616 (788)
                             ..   .     ..+++|+-+ .++|.+++.   .....   +....++.+..|+++.+++||..   |++|+|
T Consensus        95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgd  170 (288)
T PF14531_consen   95 GKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGD  170 (288)
T ss_dssp             TS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST
T ss_pred             CCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEecc
Confidence                   11   1     235677777 668887753   22222   34556677889999999999999   999999


Q ss_pred             CCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccC--------CCCCccCcchhhHHHHH
Q 047157          617 IKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN--------VPVTTKVDVFSFGVMLL  688 (788)
Q Consensus       617 lkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~k~DVwSlGvil~  688 (788)
                      |+|+|++++     .++.++|+||+.....+.....    ...+..|.|||....        ..++.+.|.|++|+++|
T Consensus       171 i~~~nfll~-----~~G~v~Lg~F~~~~r~g~~~~~----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly  241 (288)
T PF14531_consen  171 IKPENFLLD-----QDGGVFLGDFSSLVRAGTRYRC----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLY  241 (288)
T ss_dssp             -SGGGEEE------TTS-EEE--GGGEEETTEEEEG----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHH
T ss_pred             cceeeEEEc-----CCCCEEEcChHHHeecCceeec----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHH
Confidence            999999999     8899999999887765432221    234578999997633        35788999999999999


Q ss_pred             HHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCC
Q 047157          689 EIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLR  761 (788)
Q Consensus       689 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R  761 (788)
                      .|.+++.||...........                    .+    . ... +.++.+..||..+|+.||.+|
T Consensus       242 ~lWC~~lPf~~~~~~~~~~~--------------------~f----~-~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  242 SLWCGRLPFGLSSPEADPEW--------------------DF----S-RCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             HHHHSS-STCCCGGGSTSGG--------------------GG----T-TSS----HHHHHHHHHHT-SSGGGS
T ss_pred             HHHHccCCCCCCCccccccc--------------------cc----h-hcC-CcCHHHHHHHHHHccCCcccC
Confidence            99999999986633221110                    00    0 111 456778889999999999988

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.73  E-value=2.1e-17  Score=160.72  Aligned_cols=184  Identities=14%  Similarity=0.053  Sum_probs=136.6

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccchHH----HHHHHHHHHHHhcCCC-ccccceEeeEEecCCeEEEEEe
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK----TNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~----~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      ...|++|+||+||.+.    ..+.+++.+.+.....-    ....+.+|+++|++|+ |+++++++++    +..+++||
T Consensus         7 ~~~l~~~~f~~v~~~~----~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme   78 (218)
T PRK12274          7 NEPLKSDTFGRILLVR----GGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS   78 (218)
T ss_pred             ceeecCCCcceEEEee----cCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence            4679999999999653    34557777777654321    1235889999999995 5889999886    45699999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCC-CCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDI-KPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dl-kp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      |+.|.+|.+.+..        ....++.|++++|.++|++   +|+|||| ||+|||++     .++.++|+|||++...
T Consensus        79 yI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~-----~~g~i~LIDFG~A~~~  142 (218)
T PRK12274         79 YLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQ-----EDGSPAVIDFQLAVRG  142 (218)
T ss_pred             eecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEc-----CCCCEEEEECCCceec
Confidence            9999998754311        1235788999999999999   9999999 79999998     6778999999999865


Q ss_pred             CCCCCc----c--------cccccCCccccCcccccCC-CCC-ccCcchhhHHHHHHHHhCCCCCCcc
Q 047157          647 NKDQTR----T--------DTNMRGTMGYVAPEWLRNV-PVT-TKVDVFSFGVMLLEIICGRRHIELS  700 (788)
Q Consensus       647 ~~~~~~----~--------~~~~~gt~~y~aPE~~~~~-~~s-~k~DVwSlGvil~elltg~~p~~~~  700 (788)
                      ......    .        ..-...++.|++|+...-- ..+ ...+.++-|.-+|.++|++.+....
T Consensus       143 ~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~  210 (218)
T PRK12274        143 NPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED  210 (218)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence            543321    0        0112356778888754321 333 5678889999999999999876543

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.72  E-value=2.3e-17  Score=168.26  Aligned_cols=200  Identities=22%  Similarity=0.248  Sum_probs=141.7

Q ss_pred             CccccceEeeEEec---------------------------CCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHH
Q 047157          545 HHKNLVRLLGFCSE---------------------------EDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV  597 (788)
Q Consensus       545 ~hpniv~~~~~~~~---------------------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi  597 (788)
                      +|||||++.++|.+                           ....|+||..+ ..+|.+++..+  ..+.....-|+.|+
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~--~~s~r~~~~~laQl  350 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTR--HRSYRTGRVILAQL  350 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcC--CCchHHHHHHHHHH
Confidence            68888888877632                           23578999887 45999999654  45566677789999


Q ss_pred             HHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCC-----CcccccccCCccccCcccccCC
Q 047157          598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ-----TRTDTNMRGTMGYVAPEWLRNV  672 (788)
Q Consensus       598 ~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~  672 (788)
                      ++|+.|||.+   +|.|||+|.+|||+..++ +......|+|||++---....     ........|...-||||+....
T Consensus       351 LEav~hL~~h---gvAhRDlKSDNiL~Eldd-D~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~  426 (598)
T KOG4158|consen  351 LEAVTHLHKH---GVAHRDLKSDNILLELDD-DEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV  426 (598)
T ss_pred             HHHHHHHHHc---cchhhcccccceEEEecC-CCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence            9999999999   999999999999997553 255678999999986543321     2223345688889999998543


Q ss_pred             C-----C-CccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHH
Q 047157          673 P-----V-TTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERM  746 (788)
Q Consensus       673 ~-----~-s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l  746 (788)
                      +     . -.|+|.|+.|.+.||+++...||........      ....     +.+..+..+.+         .....+
T Consensus       427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L------~~r~-----Yqe~qLPalp~---------~vpp~~  486 (598)
T KOG4158|consen  427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLL------DTRT-----YQESQLPALPS---------RVPPVA  486 (598)
T ss_pred             CCCceeeccchhhhhhhhhhHHHHhccCCcccccchhee------chhh-----hhhhhCCCCcc---------cCChHH
Confidence            2     1 2589999999999999999999976321110      1101     12222222221         123456


Q ss_pred             HHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          747 AMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       747 ~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                      .+++...|+.||++|++..-....|
T Consensus       487 rqlV~~lL~r~pskRvsp~iAANvl  511 (598)
T KOG4158|consen  487 RQLVFDLLKRDPSKRVSPNIAANVL  511 (598)
T ss_pred             HHHHHHHhcCCccccCCccHHHhHH
Confidence            6788889999999999987655544

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.72  E-value=3.9e-17  Score=161.53  Aligned_cols=141  Identities=17%  Similarity=0.127  Sum_probs=108.4

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccchHH--------------------------HHHHHHHHHHHhcCCCc
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK--------------------------TNEEFMTELKIIGRTHH  546 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~--------------------------~~~~~~~E~~~l~~l~h  546 (788)
                      .+.||+|++|.||+|...   ++..||||.++.....                          ....+..|.+.+.++.|
T Consensus         2 ~~~ig~G~~~~Vy~a~~~---~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~   78 (190)
T cd05145           2 NGCISTGKEANVYHARTG---DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYE   78 (190)
T ss_pred             CceeecCCCcEEEEEEcC---CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHh
Confidence            367999999999999874   5779999998754210                          01234678999999999


Q ss_pred             cccceEeeEEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhh-ccCCceEecCCCCCcEEec
Q 047157          547 KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE-ECETQIIHCDIKPQNVLLD  625 (788)
Q Consensus       547 pniv~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~  625 (788)
                      +++.....+...  ..+|||||++++++...... ...++......++.|++.+|.+||+ .   +|+||||||+||+++
T Consensus        79 ~~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~-~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~  152 (190)
T cd05145          79 AGVPVPEPILLK--KNVLVMEFIGDDGSPAPRLK-DVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH  152 (190)
T ss_pred             CCCCCceEEEec--CCEEEEEEecCCCchhhhhh-hccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE
Confidence            987544443332  24899999998865443222 2456778889999999999999999 8   999999999999995


Q ss_pred             cCCCCCCCcEEEeecCCccccCC
Q 047157          626 LKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       626 ~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                            ++.++|+|||++.....
T Consensus       153 ------~~~~~liDFG~a~~~~~  169 (190)
T cd05145         153 ------DGKPYIIDVSQAVELDH  169 (190)
T ss_pred             ------CCCEEEEEcccceecCC
Confidence                  35799999999987643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK10345 hypothetical protein; Provisional

Probab=99.72  E-value=4.1e-17  Score=162.15  Aligned_cols=138  Identities=20%  Similarity=0.258  Sum_probs=105.8

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-----CccccceEeeEEecCC---eEE-
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-----HHKNLVRLLGFCSEED---KRL-  563 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-----~hpniv~~~~~~~~~~---~~~-  563 (788)
                      .++||+|+|+.||.  ++  ..... +||++........+.+.+|+.+++.+     .||||++++++++++.   ..+ 
T Consensus         7 ~~~LG~G~~~~Vy~--hp--~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~   81 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HP--EDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD   81 (210)
T ss_pred             cceecCCCceEEEE--CC--CCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence            36899999999995  43  33433 68877654344567899999999999     5799999999998864   333 


Q ss_pred             EEEec--CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHH-HHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          564 LVYEL--MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL-LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       564 lV~e~--~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL-~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      +|+||  +++++|.+++.+.  .+++.  ..++.|++.++ +|||++   +|+||||||+|||++..+ ..+..++|+||
T Consensus        82 ~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~-~~~~~~~LiDg  153 (210)
T PRK10345         82 VIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRIS-ESEVIPVVCDN  153 (210)
T ss_pred             EEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccC-CCCCcEEEEEC
Confidence            78999  5579999999553  34444  35678888777 999999   999999999999997433 13458999995


Q ss_pred             CCc
Q 047157          641 GIS  643 (788)
Q Consensus       641 g~a  643 (788)
                      +-+
T Consensus       154 ~G~  156 (210)
T PRK10345        154 IGE  156 (210)
T ss_pred             CCC
Confidence            443

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.68  E-value=6.1e-18  Score=183.59  Aligned_cols=189  Identities=29%  Similarity=0.285  Sum_probs=152.7

Q ss_pred             cccccccceEEEEEEe-ccCcceeeeeeecccchHH--HHHHHHHHHHHhcCCC-ccccceEeeEEecCCeEEEEEecCC
Q 047157          495 LVGTGSSGKVYRGILR-LKDTQIEIAVKKLEKDIEK--TNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDKRLLVYELMP  570 (788)
Q Consensus       495 ~lg~G~~g~Vy~~~~~-~~~~~~~vavK~l~~~~~~--~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lV~e~~~  570 (788)
                      ++|+|.||.|+++.-. ..+.+..+|+|.+.+....  .......|..++...+ ||.++++.-.++.+...++++++..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            3789999999875321 2244556788877654311  1124556778888886 9999999999999999999999999


Q ss_pred             CCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCC
Q 047157          571 NGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ  650 (788)
Q Consensus       571 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~  650 (788)
                      +|.|...+.+. ..........+...++-+++++|+.   +|+|||+|++||+++     .+|++++.|||+++..-...
T Consensus        81 gg~lft~l~~~-~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld-----~~Ghi~~tdfglske~v~~~  151 (612)
T KOG0603|consen   81 GGDLFTRLSKE-VMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLL-----LEGHIKLTDFGLSKEAVKEK  151 (612)
T ss_pred             cchhhhccccC-CchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeec-----ccCccccCCchhhhHhHhhh
Confidence            99999888655 3344555556667789999999999   999999999999999     88999999999998764433


Q ss_pred             CcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCc
Q 047157          651 TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIEL  699 (788)
Q Consensus       651 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~  699 (788)
                      ..     +||..|||||++.  ....++|-||||++.+||++|..||..
T Consensus       152 ~~-----cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~  193 (612)
T KOG0603|consen  152 IA-----CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG  193 (612)
T ss_pred             hc-----ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence            22     7899999999998  578899999999999999999999976

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.67  E-value=3.9e-17  Score=189.66  Aligned_cols=204  Identities=23%  Similarity=0.207  Sum_probs=158.3

Q ss_pred             HHHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC---ccccceEeeEEecC
Q 047157          483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH---HKNLVRLLGFCSEE  559 (788)
Q Consensus       483 ~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~  559 (788)
                      -++....+.+.+.||+|+||+||.|...   ++..||+|.-+....   =+|.--.+++.||+   -+-|+++...+.-.
T Consensus       693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~---~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~  766 (974)
T KOG1166|consen  693 FEVGGEKFCISKEIGEGSYGSVYVATHS---NGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVFQ  766 (974)
T ss_pred             eeecceeEEEEeeeccccceEEEEeecC---CCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHccC
Confidence            3455556677899999999999999885   488999998653321   11222223334443   23455555556667


Q ss_pred             CeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCC--CCCcEEE
Q 047157          560 DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD--TNYMAKI  637 (788)
Q Consensus       560 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~--~~~~~kL  637 (788)
                      +.-+||+||.+.|+|.+++. ..+.+++.....++.|+++-+++||..   +|||+||||+|+||..+...  +...++|
T Consensus       767 ~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~l  842 (974)
T KOG1166|consen  767 NASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYL  842 (974)
T ss_pred             CcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEE
Confidence            78899999999999999996 557789999999999999999999999   99999999999999654322  3557999


Q ss_pred             eecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCC
Q 047157          638 SDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRH  696 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p  696 (788)
                      +|||.+..+.--... ......+|-.+--+|...+++++..+|.|.+..+++-||.|+..
T Consensus       843 IDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~  902 (974)
T KOG1166|consen  843 IDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM  902 (974)
T ss_pred             EecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence            999999866432222 33446778899999999999999999999999999999999853

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.63  E-value=8.6e-17  Score=171.51  Aligned_cols=121  Identities=28%  Similarity=0.513  Sum_probs=106.2

Q ss_pred             eEEEEEecCCCCCHhHhhhcc--CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEe
Q 047157          561 KRLLVYELMPNGTLSNFLFHE--GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS  638 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~  638 (788)
                      ..||.|+++...+|.++|..+  ....++...+.++.|++.|+.|   +   +.+|+|+||.||+..     .+..+||.
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~-----~d~q~kIg  398 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFS-----DDDQLKIG  398 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccc-----cchhhhhh
Confidence            578999999999999999543  4566888999999999999999   5   899999999999997     67789999


Q ss_pred             ecCCccccCCCC-----CcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh
Q 047157          639 DFGISKLLNKDQ-----TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC  692 (788)
Q Consensus       639 Dfg~a~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt  692 (788)
                      |||+........     ....+...||..||+||.+.+..|+.|+||||||+||+||+.
T Consensus       399 DFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  399 DFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             hhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence            999998776554     223455679999999999999999999999999999999997

>smart00090 RIO RIO-like kinase

Probab=99.62  E-value=1.6e-15  Score=154.71  Aligned_cols=142  Identities=18%  Similarity=0.231  Sum_probs=107.9

Q ss_pred             hcccccccccccceEEEEE-EeccCcceeeeeeecccchH------------------------HHHHHHHHHHHHhcCC
Q 047157          490 KGFSKLVGTGSSGKVYRGI-LRLKDTQIEIAVKKLEKDIE------------------------KTNEEFMTELKIIGRT  544 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~-~~~~~~~~~vavK~l~~~~~------------------------~~~~~~~~E~~~l~~l  544 (788)
                      +.+.+.||+|++|.||+|. ..  .++..||+|.+.....                        .....+..|++.+.++
T Consensus        30 ~~i~~~Lg~G~~g~Vy~a~~~~--~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L  107 (237)
T smart00090       30 SAIGGCISTGKEANVYHALDFD--GSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL  107 (237)
T ss_pred             HHhCCeeccCcceeEEEEEecC--CCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            4566899999999999998 33  4677999998864321                        0123467899999999


Q ss_pred             Ccc--ccceEeeEEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCc-eEecCCCCCc
Q 047157          545 HHK--NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ-IIHCDIKPQN  621 (788)
Q Consensus       545 ~hp--niv~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~-ivH~dlkp~N  621 (788)
                      .+.  .+++++++    ...++||||+++.+|....... ..........++.||+.+|.+||+.   + |+||||||+|
T Consensus       108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~N  179 (237)
T smart00090      108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYN  179 (237)
T ss_pred             HhcCCCCCeeeEe----cCceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhh
Confidence            753  34455543    2358999999998887665332 3445566778999999999999999   9 9999999999


Q ss_pred             EEeccCCCCCCCcEEEeecCCccccC
Q 047157          622 VLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       622 Ill~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++      ++.++|+|||.+....
T Consensus       180 Ili~------~~~i~LiDFg~a~~~~  199 (237)
T smart00090      180 ILVH------DGKVVIIDVSQSVELD  199 (237)
T ss_pred             EEEE------CCCEEEEEChhhhccC
Confidence            9996      3579999999987543

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.60  E-value=3.7e-15  Score=150.38  Aligned_cols=134  Identities=21%  Similarity=0.348  Sum_probs=109.7

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch--------HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--------EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      +.||+|++|.||+|..    .+..+++|......        ......+.+|++++..++|++|+....++...+..++|
T Consensus         2 ~~l~~G~~~~vy~~~~----~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv   77 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF----LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIV   77 (211)
T ss_pred             cccccCceEEEEEEee----CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEE
Confidence            5789999999999976    33467778654221        11234678899999999999988777777777888999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||++|++|.+++....    . .+..++.+++.+|.+||+.   +++|+|++|+|||++      ++.++|+|||.+..
T Consensus        78 ~e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~------~~~~~liDf~~a~~  143 (211)
T PRK14879         78 MEYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS------GGKIYLIDFGLAEF  143 (211)
T ss_pred             EEEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE------CCCEEEEECCcccC
Confidence            99999999999985432    1 7788999999999999999   999999999999996      35799999998864

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.59  E-value=7.3e-15  Score=146.53  Aligned_cols=137  Identities=15%  Similarity=0.170  Sum_probs=106.3

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchH----------------------HHHHHHHHHHHHhcCCCcc
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE----------------------KTNEEFMTELKIIGRTHHK  547 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~----------------------~~~~~~~~E~~~l~~l~hp  547 (788)
                      +.+.+.||+|+||.||++...   ++..||||.+.....                      .....+..|..++..+.|+
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   93 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP---DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE   93 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC---CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc
Confidence            666789999999999999763   577999997643210                      1112367788888888877


Q ss_pred             --ccceEeeEEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEec
Q 047157          548 --NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLD  625 (788)
Q Consensus       548 --niv~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  625 (788)
                        .+++.++.    ...++||||+++++|......       .....++.+++.++.++|+.   +|+|+||||+||+++
T Consensus        94 ~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~  159 (198)
T cd05144          94 GFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVD  159 (198)
T ss_pred             CCCCCceeec----CCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEc
Confidence              44555442    355899999999999876421       23457889999999999998   999999999999998


Q ss_pred             cCCCCCCCcEEEeecCCccccCC
Q 047157          626 LKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       626 ~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                           .++.++|+|||++.....
T Consensus       160 -----~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         160 -----DDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             -----CCCcEEEEECCccccCCC
Confidence                 778999999999976543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.59  E-value=7.4e-15  Score=168.79  Aligned_cols=135  Identities=17%  Similarity=0.263  Sum_probs=107.0

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeeccc--c----hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK--D----IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~--~----~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ...++||+|+||+||+|.+.  .....+.++..+.  .    .....+++.+|++++.+++|++++....++.+....++
T Consensus       336 ~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~l  413 (535)
T PRK09605        336 IPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTI  413 (535)
T ss_pred             CccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEE
Confidence            34688999999999999875  2222222211111  0    11223578899999999999999988888777778899


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++++|.+++.         ....++.+++++|.+||+.   +++||||||+|||++      ++.++|+|||+++
T Consensus       414 v~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl~------~~~~~liDFGla~  475 (535)
T PRK09605        414 VMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIVR------DDRLYLIDFGLGK  475 (535)
T ss_pred             EEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEEE------CCcEEEEeCcccc
Confidence            999999999999884         3567999999999999999   999999999999994      4579999999997


Q ss_pred             c
Q 047157          645 L  645 (788)
Q Consensus       645 ~  645 (788)
                      .
T Consensus       476 ~  476 (535)
T PRK09605        476 Y  476 (535)
T ss_pred             c
Confidence            5

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.59  E-value=7e-15  Score=146.86  Aligned_cols=130  Identities=18%  Similarity=0.337  Sum_probs=103.4

Q ss_pred             cccccccceEEEEEEeccCcceeeeeeecccch--------HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--------EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       495 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .||+|++|.||+|...    +..+++|......        ....+++.+|++++..++|+++.....++...+..++||
T Consensus         1 ~ig~G~~~~vy~~~~~----~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~   76 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL----GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVM   76 (199)
T ss_pred             CCCCCceEEEEEeecC----CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEE
Confidence            4899999999999852    3578888753211        112356789999999999887665555555667789999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+++++|.+++.....        .++.+++.+|.+||+.   +++|+|++|+||+++      ++.++++|||++..
T Consensus        77 e~~~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~------~~~~~liDfg~a~~  138 (199)
T TIGR03724        77 EYIEGKPLKDVIEEGND--------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR------DDKLYLIDFGLGKY  138 (199)
T ss_pred             EEECCccHHHHHhhcHH--------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE------CCcEEEEECCCCcC
Confidence            99999999998744311        7899999999999999   999999999999996      45799999998865

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.58  E-value=9e-16  Score=174.59  Aligned_cols=203  Identities=26%  Similarity=0.299  Sum_probs=137.3

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCC
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      .+.|..|+||.||..+++  .+.+..|+|+ .++.-     +.+-  ++.....|.+|                     |
T Consensus        88 IklisngAygavylvrh~--~trqrfa~ki-Nkq~l-----ilRn--ilt~a~npfvv---------------------g  136 (1205)
T KOG0606|consen   88 IKLISNGAYGAVYLVRHK--ETRQRFAMKI-NKQNL-----ILRN--ILTFAGNPFVV---------------------G  136 (1205)
T ss_pred             eEeeccCCCCceeeeecc--ccccchhhcc-cccch-----hhhc--cccccCCccee---------------------c
Confidence            578999999999999886  6677888843 32211     1110  33333444433                     3


Q ss_pred             CHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCC--
Q 047157          573 TLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ--  650 (788)
Q Consensus       573 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~--  650 (788)
                      +-...+...+. ++.        +++.+++|||+.   +|+|||+||+|.+|+     .-+++|+.|||+.+......  
T Consensus       137 Dc~tllk~~g~-lPv--------dmvla~Eylh~y---givhrdlkpdnllIT-----~mGhiKlTDfgLsk~GLms~at  199 (1205)
T KOG0606|consen  137 DCATLLKNIGP-LPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLIT-----SMGHIKLTDFGLSKKGLMSLAT  199 (1205)
T ss_pred             hhhhhcccCCC-Ccc--------hhhHHhHhhccC---CeecCCCCCCcceee-----ecccccccchhhhhhhhhhccc
Confidence            33333432222 221        237899999999   999999999999998     88899999999987542100  


Q ss_pred             ------------CcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHH
Q 047157          651 ------------TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVI  718 (788)
Q Consensus       651 ------------~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  718 (788)
                                  .......+||+.|+|||++....|...+|.|++|+|+||.+.|+.||.+...++...       ..+ 
T Consensus       200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg-------~vi-  271 (1205)
T KOG0606|consen  200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG-------QVI-  271 (1205)
T ss_pred             hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHh-------hhh-
Confidence                        011234689999999999999999999999999999999999999998875544211       111 


Q ss_pred             HHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC
Q 047157          719 SCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP  762 (788)
Q Consensus       719 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP  762 (788)
                          ...+..     ++.  +.....+..+++.+.|+.+|..|-
T Consensus       272 ----sd~i~w-----pE~--dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  272 ----SDDIEW-----PEE--DEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             ----hhhccc-----ccc--CcCCCHHHHHHHHHHHHhChHhhc
Confidence                111000     000  222344566788889999999995

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.50  E-value=2.6e-15  Score=171.74  Aligned_cols=254  Identities=24%  Similarity=0.276  Sum_probs=186.7

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCC-ccccceEeeEEecCCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lV~  566 (788)
                      +++.+.||+|+|+.|-..... ......+++|.+....  ....+.+..|..+-..+. |+|++++++...+.+..+++.
T Consensus        22 ~~~~~~ig~gs~~~~~~~~~~-~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~  100 (601)
T KOG0590|consen   22 YKLSRSIGKGSFSSSALASNS-RDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL  100 (601)
T ss_pred             ccccccccccccchhhhhhhc-CCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence            455677999999999877654 2344567777775442  333445566787777786 999999999999999999999


Q ss_pred             ecCCCCCHhHhh-hccCCCCCHHHHHHHHHHHHHHHHHhh-hccCCceEecCCCCCcEEeccCCCCCCC-cEEEeecCCc
Q 047157          567 ELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLLYLH-EECETQIIHCDIKPQNVLLDLKTLDTNY-MAKISDFGIS  643 (788)
Q Consensus       567 e~~~~gsL~~~l-~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~~~~ivH~dlkp~NIll~~~~~~~~~-~~kL~Dfg~a  643 (788)
                      |+..++++.+.+ .......+....-.++.|+..++.|+| ..   ++.|+||||+|.+++     ..+ ..+++|||+|
T Consensus       101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~-----~s~~~l~~~df~~A  172 (601)
T KOG0590|consen  101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLD-----ESGSALKIADFGLA  172 (601)
T ss_pred             CcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhc-----cCCCcccCCCchhh
Confidence            999999999988 444335566667779999999999999 77   999999999999998     666 8999999999


Q ss_pred             cccCC--CCCcccccccC-CccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHH
Q 047157          644 KLLNK--DQTRTDTNMRG-TMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVIS  719 (788)
Q Consensus       644 ~~~~~--~~~~~~~~~~g-t~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  719 (788)
                      .....  ..........| ++.|+|||...+. ...+..|+||.|+++..+++|..|+..........      ..|...
T Consensus       173 t~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~------~~~~~~  246 (601)
T KOG0590|consen  173 TAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY------SSWKSN  246 (601)
T ss_pred             ccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccc------eeeccc
Confidence            98766  23333344667 9999999999874 45678999999999999999999997654332110      011000


Q ss_pred             HhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          720 CMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       720 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .   .        ......-........++...++..+|+.|.+.+++..
T Consensus       247 ~---~--------~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  247 K---G--------RFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             c---c--------ccccCccccCChhhhhcccccccCCchhccccccccc
Confidence            0   0        0000011112234556677788899999999888753

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.48  E-value=2.4e-13  Score=128.78  Aligned_cols=134  Identities=20%  Similarity=0.213  Sum_probs=112.3

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCc--cccceEeeEEecCCeEEEEEecCC
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHH--KNLVRLLGFCSEEDKRLLVYELMP  570 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h--pniv~~~~~~~~~~~~~lV~e~~~  570 (788)
                      .+.||+|.++.||++...   . ..+++|.......  ...+.+|+..+..++|  .++++++++....+..++++||++
T Consensus         3 ~~~i~~g~~~~v~~~~~~---~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~   76 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTK---D-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIE   76 (155)
T ss_pred             ceecccccccceEEEEec---C-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecC
Confidence            367899999999999874   2 5789998865433  5678899999999976  589999999888889999999998


Q ss_pred             CCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          571 NGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       571 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      +..+..+        +......++.+++++|++||.....+++|+|++|+||+++     +...++++|||.+..
T Consensus        77 g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~-----~~~~~~l~Df~~~~~  138 (155)
T cd05120          77 GETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVD-----DGKILGIIDWEYAGY  138 (155)
T ss_pred             CeecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEE-----CCcEEEEEecccccC
Confidence            8777654        4566678899999999999986445799999999999998     567899999998874

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.44  E-value=6.4e-13  Score=135.84  Aligned_cols=134  Identities=14%  Similarity=0.207  Sum_probs=101.7

Q ss_pred             cccc-ccccceEEEEEEeccCcceeeeeeecccch-------------HHHHHHHHHHHHHhcCCCcccc--ceEeeEEe
Q 047157          494 KLVG-TGSSGKVYRGILRLKDTQIEIAVKKLEKDI-------------EKTNEEFMTELKIIGRTHHKNL--VRLLGFCS  557 (788)
Q Consensus       494 ~~lg-~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-------------~~~~~~~~~E~~~l~~l~hpni--v~~~~~~~  557 (788)
                      ..|| .|+.|+||.+...    +..++||.+....             ......+.+|++++.+++|++|  ++.+++..
T Consensus        37 ~~lg~~~g~gtv~~v~~~----~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~  112 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP----GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARV  112 (239)
T ss_pred             ceeecCCCCccEEEEEeC----CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeee
Confidence            4677 8889999988663    4478888774311             1223567889999999998875  67777654


Q ss_pred             cCC----eEEEEEecCCC-CCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCC
Q 047157          558 EED----KRLLVYELMPN-GTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTN  632 (788)
Q Consensus       558 ~~~----~~~lV~e~~~~-gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~  632 (788)
                      ...    ..++|+|++++ .+|.+++...  .++..    .+.+|+.+|.+||+.   +|+|+||||+|||++     .+
T Consensus       113 ~~~~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~-----~~  178 (239)
T PRK01723        113 VRHGLFYRADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLD-----PD  178 (239)
T ss_pred             eecCcceeeeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEc-----CC
Confidence            332    23599999997 6999888542  33432    367899999999999   999999999999998     56


Q ss_pred             CcEEEeecCCccc
Q 047157          633 YMAKISDFGISKL  645 (788)
Q Consensus       633 ~~~kL~Dfg~a~~  645 (788)
                      +.++|+|||.+..
T Consensus       179 ~~v~LIDfg~~~~  191 (239)
T PRK01723        179 GKFWLIDFDRGEL  191 (239)
T ss_pred             CCEEEEECCCccc
Confidence            6899999998875

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.44  E-value=3.6e-13  Score=133.03  Aligned_cols=136  Identities=17%  Similarity=0.189  Sum_probs=94.1

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccchHH--HHHH----------------------HHHHHHHhcCCCcc-
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK--TNEE----------------------FMTELKIIGRTHHK-  547 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~--~~~~----------------------~~~E~~~l~~l~hp-  547 (788)
                      .+.||+|+||+||+|...   ++..||||.+......  ....                      ...|.+.+.++.+. 
T Consensus         2 ~~~lg~G~~g~Vy~a~~~---~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~   78 (187)
T cd05119           2 GGPIGTGKEADVYLALDG---DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAG   78 (187)
T ss_pred             CcccccccceeEEEEECC---CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcC
Confidence            467999999999999864   5668999987643211  1111                      13455555555433 


Q ss_pred             -ccceEeeEEecCCeEEEEEecCCCCCHhHh-hhccCCCCCHHHHHHHHHHHHHHHHHhhh-ccCCceEecCCCCCcEEe
Q 047157          548 -NLVRLLGFCSEEDKRLLVYELMPNGTLSNF-LFHEGQRPGWVQRVEIALGVARGLLYLHE-ECETQIIHCDIKPQNVLL  624 (788)
Q Consensus       548 -niv~~~~~~~~~~~~~lV~e~~~~gsL~~~-l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll  624 (788)
                       .+.+.++.    ...++||||++++.+... +.....  . .....++.+++.++.++|. .   +|+|+||||+||++
T Consensus        79 ~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~--~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili  148 (187)
T cd05119          79 VPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRL--L-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILV  148 (187)
T ss_pred             CCCCceEec----CCCEEEEEEeCCCCccChhhhhhhh--c-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEE
Confidence             24444443    245899999998543221 111101  1 5667899999999999999 7   99999999999999


Q ss_pred             ccCCCCCCCcEEEeecCCccccC
Q 047157          625 DLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       625 ~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      +      ++.++|+|||.+....
T Consensus       149 ~------~~~~~liDfg~a~~~~  165 (187)
T cd05119         149 D------DGKVYIIDVPQAVEID  165 (187)
T ss_pred             E------CCcEEEEECccccccc
Confidence            6      4579999999997554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.34  E-value=1.8e-12  Score=130.12  Aligned_cols=149  Identities=21%  Similarity=0.340  Sum_probs=112.8

Q ss_pred             hcCCCccccceEeeEEec-----CCeEEEEEecCCCCCHhHhhhcc---CCCCCHHHHHHHHHHHHHHHHHhhhccCCce
Q 047157          541 IGRTHHKNLVRLLGFCSE-----EDKRLLVYELMPNGTLSNFLFHE---GQRPGWVQRVEIALGVARGLLYLHEECETQI  612 (788)
Q Consensus       541 l~~l~hpniv~~~~~~~~-----~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~i  612 (788)
                      |-++-|.|||+++.|..+     ..+..++.|||..|+|..+|++.   +..+....-.+++.||+.||.|||+ |.+.|
T Consensus       121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~Ppi  199 (458)
T KOG1266|consen  121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDPPI  199 (458)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCCcc
Confidence            344579999999988754     34678999999999999999653   4567777888999999999999999 58899


Q ss_pred             EecCCCCCcEEeccCCCCCCCcEEEeecCCcccc---CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHH
Q 047157          613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL---NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLE  689 (788)
Q Consensus       613 vH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~---~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~e  689 (788)
                      +|+++..+.|++.     .++-+|+.--.-...-   ............+-++|.+||.=.....+.++|||+||+..+|
T Consensus       200 ihgnlTc~tifiq-----~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAle  274 (458)
T KOG1266|consen  200 IHGNLTCDTIFIQ-----HNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALE  274 (458)
T ss_pred             ccCCcchhheeec-----CCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHH
Confidence            9999999999998     6666666421111100   0001111222346789999998877788889999999999999


Q ss_pred             HHhCCC
Q 047157          690 IICGRR  695 (788)
Q Consensus       690 lltg~~  695 (788)
                      |..+..
T Consensus       275 mailEi  280 (458)
T KOG1266|consen  275 MAILEI  280 (458)
T ss_pred             HHHhee
Confidence            988764

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.32  E-value=1.8e-12  Score=141.62  Aligned_cols=256  Identities=20%  Similarity=0.212  Sum_probs=185.5

Q ss_pred             HHHHHHhhcccccccc--cccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCC-CccccceEeeEEe
Q 047157          483 QELQEATKGFSKLVGT--GSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRT-HHKNLVRLLGFCS  557 (788)
Q Consensus       483 ~~l~~~t~~~~~~lg~--G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~  557 (788)
                      .+.......+.+.+|.  |.+|.||.+..........+|+|+-+...  ......=.+|+....++ .|+|.++.+...+
T Consensus       109 ~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e  188 (524)
T KOG0601|consen  109 DSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWE  188 (524)
T ss_pred             cchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccc
Confidence            4455566667788999  99999999987333667788888743222  23333344666666666 4999999999999


Q ss_pred             cCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHH----HHHHhhhccCCceEecCCCCCcEEeccCCCCCC-
Q 047157          558 EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVAR----GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTN-  632 (788)
Q Consensus       558 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~----aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~-  632 (788)
                      ..+..++-+|++ +.+|..+.......++....+.++.+..+    ||.++|..   +++|-|+||.||++.     .+ 
T Consensus       189 ~~~~lfiqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~-----~~~  259 (524)
T KOG0601|consen  189 GSGILFIQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTT-----SDW  259 (524)
T ss_pred             cCCcceeeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecc-----ccc
Confidence            999999999998 57898888777777888888899999999    99999999   999999999999998     66 


Q ss_pred             CcEEEeecCCccccCCCCCc----ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCcccccccccc
Q 047157          633 YMAKISDFGISKLLNKDQTR----TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEE  708 (788)
Q Consensus       633 ~~~kL~Dfg~a~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~  708 (788)
                      ...+++|||+...+......    ......+...|++||..++ -++.+.|||++|.++.+..++..+........... 
T Consensus       260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~-  337 (524)
T KOG0601|consen  260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ-  337 (524)
T ss_pred             ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCCccc-
Confidence            78999999999887654321    1122357788999998865 67889999999999999999877654331111100 


Q ss_pred             chhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          709 VDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       709 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                                  ....-+        ..........++..++..|++.+|-.|++.+.++.
T Consensus       338 ------------~r~~~i--------p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  338 ------------LRQGYI--------PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             ------------cccccC--------chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence                        000000        00000011123333777899999999999887764

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.23  E-value=2.4e-11  Score=135.16  Aligned_cols=141  Identities=25%  Similarity=0.251  Sum_probs=97.1

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHH----------------------------------------HH
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN----------------------------------------EE  533 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~----------------------------------------~~  533 (788)
                      +.||.|++|.||+|+++   +++.||||+.+.......                                        -+
T Consensus       123 ~plasaSigQVh~A~l~---~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  199 (437)
T TIGR01982       123 KPLAAASIAQVHRARLV---DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELD  199 (437)
T ss_pred             cceeeeehhheEEEEec---CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHC
Confidence            56999999999999985   567999998754321100                                        02


Q ss_pred             HHHHHHHhcCC----CccccceEeeEE-ecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHH-HHHHhhhc
Q 047157          534 FMTELKIIGRT----HHKNLVRLLGFC-SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVAR-GLLYLHEE  607 (788)
Q Consensus       534 ~~~E~~~l~~l----~hpniv~~~~~~-~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~-aL~~LH~~  607 (788)
                      |.+|.+.+.++    +|.+-+.+-.++ ......+|||||++|++|.++........   .+..++.+++. .+..+|..
T Consensus       200 f~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~~~  276 (437)
T TIGR01982       200 LRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVLRD  276 (437)
T ss_pred             HHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHHhC
Confidence            44455555544    233223332333 22445799999999999998764322222   23456666666 46788888


Q ss_pred             cCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       608 ~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                         +++|+|+||.||+++     .++.++|+|||++..+..
T Consensus       277 ---g~~H~D~hPgNilv~-----~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       277 ---GFFHADLHPGNIFVL-----KDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             ---CceeCCCCcccEEEC-----CCCcEEEEeCCCeeECCH
Confidence               999999999999998     778999999999987653

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.20  E-value=2.9e-10  Score=125.45  Aligned_cols=165  Identities=16%  Similarity=0.219  Sum_probs=125.8

Q ss_pred             CcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHH
Q 047157          513 DTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVE  592 (788)
Q Consensus       513 ~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~  592 (788)
                      ..+.+|.|+..+...........+.++.|+.++||||+++++..+.+...|||+|.+  ..|..++.+.+    ......
T Consensus        35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l~----~~~v~~  108 (690)
T KOG1243|consen   35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKELG----KEEVCL  108 (690)
T ss_pred             ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHhH----HHHHHH
Confidence            455678888776655545566778899999999999999999999999999999987  36777774433    556667


Q ss_pred             HHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCC
Q 047157          593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV  672 (788)
Q Consensus       593 i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  672 (788)
                      .+.||+.||.|||+.+  +++|++|..+.|+++     ..+..||++|.++........ ......--..|..|+.+...
T Consensus       109 Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn-----~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s  180 (690)
T KOG1243|consen  109 GLFQILAALSFLNDDC--NLVHGNVCKDSVFVN-----ESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPS  180 (690)
T ss_pred             HHHHHHHHHHHHhccC--CeeeccEeeeeEEEc-----CCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCcc
Confidence            8899999999998653  899999999999999     889999999998865432221 11111222346677655332


Q ss_pred             CCCccCcchhhHHHHHHHHhC
Q 047157          673 PVTTKVDVFSFGVMLLEIICG  693 (788)
Q Consensus       673 ~~s~k~DVwSlGvil~elltg  693 (788)
                      .  -..|.|-||++++|++.|
T Consensus       181 ~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  181 E--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             c--cchhhhhHHHHHHHHhCc
Confidence            2  346999999999999998

>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=99.15  E-value=2.6e-11  Score=96.49  Aligned_cols=59  Identities=19%  Similarity=0.220  Sum_probs=48.7

Q ss_pred             ceeEeeeccccccccccccccccccCCHHHHHHHhhccccccccccc----CCceeecccccccc
Q 047157          334 NFTVEVMDDAGFLFDNFADLARVSNVDVEGCRKAVMDDCYSLGASLV----GSTCVKTRMPLLNA  394 (788)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~C~~~Cl~nCsC~a~~~~----~~~C~~w~~~L~~~  394 (788)
                      .++|.+++++++|+.....+.  .+.++++|+..||+||+|.||+|.    +++|++|.++|+|+
T Consensus         4 ~d~F~~l~~~~~p~~~~~~~~--~~~s~~~C~~~Cl~nCsC~Ayay~~~~~~~~C~lW~~~L~d~   66 (66)
T PF08276_consen    4 GDGFLKLPNMKLPDFDNAIVD--SSVSLEECEKACLSNCSCTAYAYSNLSGGGGCLLWYGDLVDL   66 (66)
T ss_pred             CCEEEEECCeeCCCCcceeee--cCCCHHHHHhhcCCCCCEeeEEeeccCCCCEEEEEcCEeecC
Confidence            458999999999876432221  458999999999999999999996    48999999999885

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.04  E-value=6e-10  Score=108.01  Aligned_cols=130  Identities=19%  Similarity=0.151  Sum_probs=94.0

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCcccc-ceEeeEEecCCeEEEEEecCCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNL-VRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpni-v~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      +.|+.|..+.||++...    +..+++|....... ....+.+|+++++.+.+.++ ++++.+..  ...++|||++++.
T Consensus         4 ~~l~~G~~~~vy~~~~~----~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~   76 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA----NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGS   76 (170)
T ss_pred             eecCCcccCceEEEEEC----CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCC
Confidence            56788999999998753    55899998765422 22346788999988865544 45555433  3457999999998


Q ss_pred             CHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcc--CCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          573 TLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC--ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       573 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~--~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ++.+..         .....++.+++++|+.||...  ...++|+|++|.||+++      ++.++++||+.+..
T Consensus        77 ~l~~~~---------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~------~~~~~liDf~~a~~  136 (170)
T cd05151          77 ELLTED---------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD------DGRLWLIDWEYAGM  136 (170)
T ss_pred             cccccc---------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE------CCeEEEEecccccC
Confidence            876430         111345678999999999982  22369999999999996      24689999998763

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.04  E-value=4.2e-10  Score=126.49  Aligned_cols=142  Identities=22%  Similarity=0.225  Sum_probs=89.3

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHH----------------------------------HHH------H
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK----------------------------------TNE------E  533 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~----------------------------------~~~------~  533 (788)
                      +.||+|++|.||+|+++  ++++.||||+.+....+                                  ..+      +
T Consensus       125 ~PlasaSiaQVh~A~l~--~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD  202 (537)
T PRK04750        125 KPLASASIAQVHFARLK--DNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELD  202 (537)
T ss_pred             hhhcCCCccEEEEEEEC--CCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhC
Confidence            57999999999999986  44789999998643211                                  111      2


Q ss_pred             HHHHHHHhcCCC----ccccceEeeEEec-CCeEEEEEecCCCCCHhHhh--hccCC---CCCHHHHHHHHHHHHHHHHH
Q 047157          534 FMTELKIIGRTH----HKNLVRLLGFCSE-EDKRLLVYELMPNGTLSNFL--FHEGQ---RPGWVQRVEIALGVARGLLY  603 (788)
Q Consensus       534 ~~~E~~~l~~l~----hpniv~~~~~~~~-~~~~~lV~e~~~~gsL~~~l--~~~~~---~~~~~~~~~i~~qi~~aL~~  603 (788)
                      +.+|+..+.+++    +.+.+.+-.++.+ ....+|||||++|+.+.++.  ...+.   .+.......++.|+      
T Consensus       203 ~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi------  276 (537)
T PRK04750        203 LMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV------  276 (537)
T ss_pred             HHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH------
Confidence            333444333332    3333333333332 45678999999999998753  22211   12222223333443      


Q ss_pred             hhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       604 LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                       +..   |++|+|+||.||+++.++. ..+.++++|||+...+..
T Consensus       277 -f~~---GffHaDpHPGNIlv~~~g~-~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        277 -FRD---GFFHADMHPGNIFVSYDPP-ENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             -HhC---CeeeCCCChHHeEEecCCC-CCCeEEEEecceEEECCH
Confidence             334   9999999999999983321 234899999999987754

>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

Probab=99.02  E-value=4.5e-10  Score=94.96  Aligned_cols=72  Identities=18%  Similarity=0.236  Sum_probs=58.0

Q ss_pred             ceeEeeeccccccccccccccccccCCHHHHHHHhhccccccccccc--CCceeeccccccccccccccCCceeEEeec
Q 047157          334 NFTVEVMDDAGFLFDNFADLARVSNVDVEGCRKAVMDDCYSLGASLV--GSTCVKTRMPLLNARKSASTKGMKAIIKVP  410 (788)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~C~~~Cl~nCsC~a~~~~--~~~C~~w~~~L~~~~~~~~~~~~~~~ik~~  410 (788)
                      .+.|..++++.+++..+   .. .+.++++|++.||+||+|.||+|.  +++|++|..++.+.+.. ...+.++|||++
T Consensus        11 ~~~f~~~~~~~~~~~~~---~~-~~~s~~~C~~~Cl~nCsC~a~~~~~~~~~C~~~~~~~~~~~~~-~~~~~~~yiKv~   84 (84)
T cd01098          11 TDGFLKLPDVKLPDNAS---AI-TAISLEECREACLSNCSCTAYAYNNGSGGCLLWNGLLNNLRSL-SSGGGTLYLRLA   84 (84)
T ss_pred             CCEEEEeCCeeCCCchh---hh-ccCCHHHHHHHHhcCCCcceeeecCCCCeEEEEeceecceEee-cCCCcEEEEEeC
Confidence            45788888888886543   22 567899999999999999999996  58999999999987764 334578999974

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.00  E-value=4.4e-10  Score=123.07  Aligned_cols=246  Identities=20%  Similarity=0.205  Sum_probs=166.9

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHH--HHHHHHHhcCC-CccccceEeeEEecCCeEEEEEe
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE--FMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~--~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      ++...||.|.|+.|+.... ...++..+++|.+.+.......+  -..|+.+...+ .|.++++...........|+-.|
T Consensus       268 ~~v~~i~~~~~~~~~~~~~-r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e  346 (524)
T KOG0601|consen  268 GLVSKISDGNFSSVFKVSK-RPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLE  346 (524)
T ss_pred             ceeEEccCCccccceeeee-cCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchh
Confidence            4457899999999998873 33456688999886554322222  23455555555 58888888777777777889999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |++++++...+ .-...++...++++..|++.++.++|+.   .++|+|+||+||++..    ..+.-++.|||....+.
T Consensus       347 ~~~~~s~~l~~-~~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~----~~~~~~~~~~~~~t~~~  418 (524)
T KOG0601|consen  347 FCEGGSSSLRS-VTSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISN----DGFFSKLGDFGCWTRLA  418 (524)
T ss_pred             hhcCcchhhhh-HHHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeecc----chhhhhccccccccccc
Confidence            99999887666 2234567778889999999999999998   9999999999999972    22788999999986432


Q ss_pred             CCCCcccccccCCccc-cCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          648 KDQTRTDTNMRGTMGY-VAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y-~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      -...   .....+..| .+|+......+-.+.|++|||.-+.|.+++...-+......               .+..+..
T Consensus       419 ~~~~---~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~---------------~i~~~~~  480 (524)
T KOG0601|consen  419 FSSG---VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSL---------------TIRSGDT  480 (524)
T ss_pred             eecc---cccccccccccchhhccccccccccccccccccccccccCcccCcccccce---------------eeecccc
Confidence            1111   111123334 35666677788899999999999999999875432211000               0000100


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                             +.....   ..++..+..-+..+++..||.+.+...+.+-
T Consensus       481 -------p~~~~~---~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~  517 (524)
T KOG0601|consen  481 -------PNLPGL---KLQLQVLLKVMINPDRKRRPSAVELSLHSEF  517 (524)
T ss_pred             -------cCCCch---HHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence                   111111   1444556666889999999999888766543

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.98  E-value=4.2e-09  Score=102.93  Aligned_cols=140  Identities=15%  Similarity=0.129  Sum_probs=98.5

Q ss_pred             ccccccccceEEEEEEeccC----cceeeeeeecccch----------------------HHHHHHHH----HHHHHhcC
Q 047157          494 KLVGTGSSGKVYRGILRLKD----TQIEIAVKKLEKDI----------------------EKTNEEFM----TELKIIGR  543 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~----~~~~vavK~l~~~~----------------------~~~~~~~~----~E~~~l~~  543 (788)
                      ..||.|.=+.||.|......    .+..+|||..+...                      ....+.+.    +|.+.|++
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            46899999999999754210    24689999764211                      01122333    89999998


Q ss_pred             CC--ccccceEeeEEecCCeEEEEEecCCCCCHhH-hhhccCCCCCHHHHHHHHHHHHHHHHHh-hhccCCceEecCCCC
Q 047157          544 TH--HKNLVRLLGFCSEEDKRLLVYELMPNGTLSN-FLFHEGQRPGWVQRVEIALGVARGLLYL-HEECETQIIHCDIKP  619 (788)
Q Consensus       544 l~--hpniv~~~~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~~~~~~~i~~qi~~aL~~L-H~~~~~~ivH~dlkp  619 (788)
                      +.  .-++++.+++    ...+|||||+.+..+.. .+.+  ..++..+...+..+++.+|..| |..   +|+|+||++
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDLs~  153 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADLSE  153 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCCCH
Confidence            85  3567777765    56789999997654322 2211  2344455667889999999999 788   999999999


Q ss_pred             CcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          620 QNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       620 ~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      .||+++      ++.+.|+|||.+.....
T Consensus       154 ~NIL~~------~~~v~iIDF~qav~~~h  176 (197)
T cd05146         154 YNMLWH------DGKVWFIDVSQSVEPTH  176 (197)
T ss_pred             HHEEEE------CCcEEEEECCCceeCCC
Confidence            999995      35799999999886543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.98  E-value=4.2e-09  Score=98.42  Aligned_cols=144  Identities=19%  Similarity=0.287  Sum_probs=105.5

Q ss_pred             cccccccccceEEEEEEeccCcceeeeee-ecccc-------hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVK-KLEKD-------IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK-~l~~~-------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ...|-||+=+.|+++...    ++...|| +..+.       ..-..++..+|.+.+.+++--.|.--.-++.+...-.|
T Consensus        12 l~likQGAEArv~~~~~~----Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i   87 (229)
T KOG3087|consen   12 LELIKQGAEARVPRGSFS----GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQI   87 (229)
T ss_pred             ceeeeccceeeEeeeccC----CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeE
Confidence            357889999999999763    3344444 33221       12345678899999988865454444445666777789


Q ss_pred             EEecCCC-CCHhHhhhccCCCCCHHHH-HHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          565 VYELMPN-GTLSNFLFHEGQRPGWVQR-VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       565 V~e~~~~-gsL~~~l~~~~~~~~~~~~-~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      +|||.++ .++.+++...-........ ..++..|-+.+.-||..   +|+|+||..+||++..++  ....+.|+|||+
T Consensus        88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~--~~~~~~lIdfgl  162 (229)
T KOG3087|consen   88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDG--NQITPILIDFGL  162 (229)
T ss_pred             EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCC--CcCceEEEeecc
Confidence            9999976 4788888665443333333 78899999999999999   999999999999998655  566779999999


Q ss_pred             ccc
Q 047157          643 SKL  645 (788)
Q Consensus       643 a~~  645 (788)
                      +..
T Consensus       163 s~~  165 (229)
T KOG3087|consen  163 SSV  165 (229)
T ss_pred             hhc
Confidence            864

>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins

Probab=98.97  E-value=6.1e-10  Score=91.50  Aligned_cols=64  Identities=11%  Similarity=0.060  Sum_probs=50.6

Q ss_pred             eEeeeccccccccccccccccccCCHHHHHHHhhc---cccccccccc--CCceeeccccc-cccccccccCCceeEEe
Q 047157          336 TVEVMDDAGFLFDNFADLARVSNVDVEGCRKAVMD---DCYSLGASLV--GSTCVKTRMPL-LNARKSASTKGMKAIIK  408 (788)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~C~~~Cl~---nCsC~a~~~~--~~~C~~w~~~L-~~~~~~~~~~~~~~~ik  408 (788)
                      .|.++.++..|+.        ...+++||+++|++   ||+|.||+|.  +.+|++|.++| +|+++... .|.++|+|
T Consensus        10 ~fl~~~~~klpd~--------~~~s~~eC~~~Cl~~~~nCsC~Aya~~~~~~gC~~W~~~l~~d~~~~~~-~g~~Ly~r   79 (80)
T cd00129          10 TTLIKIALKIKTT--------KANTADECANRCEKNGLPFSCKAFVFAKARKQCLWFPFNSMSGVRKEFS-HGFDLYEN   79 (80)
T ss_pred             eEEEeecccCCcc--------cccCHHHHHHHHhcCCCCCCceeeeccCCCCCeEEecCcchhhHHhccC-CCceeEeE
Confidence            3455555555543        34789999999999   9999999994  46999999999 99988754 47889987

Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.91  E-value=7.7e-09  Score=104.94  Aligned_cols=144  Identities=16%  Similarity=0.239  Sum_probs=108.2

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchH-HHHHHHHHHHHHhcCCCc--cccceEeeEEecCC---eEEEEEe
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE-KTNEEFMTELKIIGRTHH--KNLVRLLGFCSEED---KRLLVYE  567 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~h--pniv~~~~~~~~~~---~~~lV~e  567 (788)
                      +.|+.|..+.||++...   ++..+++|....... .....+..|.++++.+++  .++++++.+.....   ..++|||
T Consensus         4 ~~l~~G~~n~~~~v~~~---~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e   80 (223)
T cd05154           4 RQLSGGQSNLTYLLTAG---GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME   80 (223)
T ss_pred             eecCCCccceEEEEEec---CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence            46889999999998764   345888998765322 134578899999999865  45677888776543   5689999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcc---------------------------------------
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC---------------------------------------  608 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---------------------------------------  608 (788)
                      |+++.++.+.+..  ..++......++.+++++|..||+..                                       
T Consensus        81 ~i~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (223)
T cd05154          81 RVDGRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME  158 (223)
T ss_pred             EeCCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence            9999988776532  34677777888889999999998521                                       


Q ss_pred             --------------CCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          609 --------------ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       609 --------------~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                                    ...++|+|++|.||+++..   .+..+.|+||+.+..
T Consensus       159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~---~~~~~~iID~e~~~~  206 (223)
T cd05154         159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPD---EPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCC---CCcEEEEEecccccc
Confidence                          2468999999999999821   145689999998764

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.90  E-value=1.2e-08  Score=95.94  Aligned_cols=131  Identities=21%  Similarity=0.330  Sum_probs=96.0

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeee-cccch-------HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKK-LEKDI-------EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~-l~~~~-------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ..+.+|+=+.+|.+.+.    +..+++|. +.+.-       .-..++-.+|..++.+++--.|..-+=+..+.+...|+
T Consensus         2 ~~i~~GAEa~i~~~~~~----g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~   77 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL----GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIV   77 (204)
T ss_pred             chhhCCcceeEEeeecc----CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEE
Confidence            35788999999988653    22344442 22111       11234677899999888654444434445577788899


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||.+|..|.+++...        ...++..+-..+.-||..   +|+|+||.++||++.      +..+.++|||++..
T Consensus        78 me~I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~------~~~i~~IDfGLg~~  140 (204)
T COG3642          78 MEYIEGELLKDALEEA--------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILS------GGRIYFIDFGLGEF  140 (204)
T ss_pred             EEEeCChhHHHHHHhc--------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEe------CCcEEEEECCcccc
Confidence            9999999999988544        256788888899999999   999999999999995      44599999999874

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.80  E-value=7.3e-08  Score=103.34  Aligned_cols=168  Identities=19%  Similarity=0.267  Sum_probs=126.9

Q ss_pred             cceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEe----cCCeEEEEEecCCC-CCHh
Q 047157          501 SGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCS----EEDKRLLVYELMPN-GTLS  575 (788)
Q Consensus       501 ~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~----~~~~~~lV~e~~~~-gsL~  575 (788)
                      -.+.|++...  -++..+++|++.............-++.++++.|+|+|++.+++.    .+..+++||+|.++ ++|.
T Consensus       289 ~~Ttyk~~s~--~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~  366 (655)
T KOG3741|consen  289 SITTYKATSN--VDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY  366 (655)
T ss_pred             cceeEeeeec--cCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence            3678888876  566689999995433222223345577889999999999999886    35578999999985 5777


Q ss_pred             Hhhhcc--------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          576 NFLFHE--------------GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       576 ~~l~~~--------------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      ++-+..              +...++..+|.++.|+..||.++|+.   |..-+-|.+.+||++     .+.+++|+..|
T Consensus       367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~-----G~~RIriS~C~  438 (655)
T KOG3741|consen  367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVT-----GKMRIRISGCG  438 (655)
T ss_pred             HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEee-----CcceEEEeccc
Confidence            765432              23456889999999999999999999   999999999999998     67789998888


Q ss_pred             CccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCC
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRH  696 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p  696 (788)
                      ....+..+..               |-+.   --.+-|.=.||.+++.|.||...
T Consensus       439 i~Dvl~~d~~---------------~~le---~~Qq~D~~~lG~ll~aLAt~~~n  475 (655)
T KOG3741|consen  439 IMDVLQEDPT---------------EPLE---SQQQNDLRDLGLLLLALATGTEN  475 (655)
T ss_pred             ceeeecCCCC---------------cchh---HHhhhhHHHHHHHHHHHhhcccc
Confidence            7766544331               1111   12367888999999999999754

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.74  E-value=2.6e-07  Score=96.61  Aligned_cols=260  Identities=12%  Similarity=0.118  Sum_probs=152.3

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEE------ecC-CeEEE
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFC------SEE-DKRLL  564 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~------~~~-~~~~l  564 (788)
                      ++.||+|+-+.+|..-     .-..-+-|+..........+..   +.|... .||-+..-+.+=      .++ ...-+
T Consensus        16 gr~LgqGgea~ly~l~-----e~~d~VAKIYh~Pppa~~aqk~---a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf   87 (637)
T COG4248          16 GRPLGQGGEADLYTLG-----EVRDQVAKIYHAPPPAAQAQKV---AELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF   87 (637)
T ss_pred             CccccCCccceeeecc-----hhhchhheeecCCCchHHHHHH---HHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence            4679999999999542     1112334555444333332222   223333 566544322221      122 23567


Q ss_pred             EEecCCCCC-HhHhhhc-----cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEe
Q 047157          565 VYELMPNGT-LSNFLFH-----EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS  638 (788)
Q Consensus       565 V~e~~~~gs-L~~~l~~-----~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~  638 (788)
                      .|..+++.. ...++..     .-...+|...++.++.++.+.+.||+.   |.+-+|+.++|+|+.     ++..+.|.
T Consensus        88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVs-----d~~~V~LV  159 (637)
T COG4248          88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVS-----DDSKVVLV  159 (637)
T ss_pred             ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeee-----cCceEEEE
Confidence            787776542 2222211     112358999999999999999999999   999999999999998     88899999


Q ss_pred             ecCCccccCCCCCcccccccCCccccCccccc-----CCCCCccCcchhhHHHHHHHHhC-CCCCCccccccccccc---
Q 047157          639 DFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR-----NVPVTTKVDVFSFGVMLLEIICG-RRHIELSRVEEESEEV---  709 (788)
Q Consensus       639 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DVwSlGvil~elltg-~~p~~~~~~~~~~~~~---  709 (788)
                      |-..-....++  ....-.+|...|.+||...     +..-++..|.|.||+++++++.| ++||.+..........   
T Consensus       160 dsDsfqi~~ng--~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~  237 (637)
T COG4248         160 DSDSFQINANG--TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLET  237 (637)
T ss_pred             cccceeeccCC--ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchh
Confidence            86554433221  1122346888999999764     44567889999999999999987 8999765322111100   


Q ss_pred             hhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCC--CCCCCCCHHHHHHHhhcC
Q 047157          710 DIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHP--DPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       710 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~--dP~~RPt~~evl~~L~~~  774 (788)
                      ++....++.    ..+-+.-....+....-.-....+..+..+|+..  ++.-|||++..+..|..+
T Consensus       238 ~Ia~g~f~y----a~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al  300 (637)
T COG4248         238 DIAHGRFAY----ASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDAL  300 (637)
T ss_pred             hhhcceeee----chhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence            111111100    0011111111122211111223344455567653  356899999998888654

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.70  E-value=4.6e-09  Score=120.83  Aligned_cols=193  Identities=22%  Similarity=0.245  Sum_probs=132.1

Q ss_pred             CccccceEeeEEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEe
Q 047157          545 HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLL  624 (788)
Q Consensus       545 ~hpniv~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll  624 (788)
                      +||-+++..--+......+||++|..+++|...|+..+..-... ....+..+..++++||..   .+.|+|++|.|+|+
T Consensus       862 ~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saep-aRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~  937 (1205)
T KOG0606|consen  862 RSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEP-ARSPILERVQSLESLHSS---LRKHRDLKPDSLLI  937 (1205)
T ss_pred             CCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCCCccccc-ccchhHHHHhhhhccccc---hhhcccccccchhh
Confidence            34555544444455678899999999999999987665332223 334555678899999998   79999999999999


Q ss_pred             ccCCCCCCCcEEEeecCCccccC---------------------CC---------CCcccccccCCccccCcccccCCCC
Q 047157          625 DLKTLDTNYMAKISDFGISKLLN---------------------KD---------QTRTDTNMRGTMGYVAPEWLRNVPV  674 (788)
Q Consensus       625 ~~~~~~~~~~~kL~Dfg~a~~~~---------------------~~---------~~~~~~~~~gt~~y~aPE~~~~~~~  674 (788)
                      .     .++..+++||+......                     ..         .........+|+.|.+||...+...
T Consensus       938 ~-----~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~h 1012 (1205)
T KOG0606|consen  938 A-----YDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRH 1012 (1205)
T ss_pred             c-----ccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccC
Confidence            7     78899999998433221                     00         0011233568999999999999999


Q ss_pred             CccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHcc
Q 047157          675 TTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCN  754 (788)
Q Consensus       675 s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl  754 (788)
                      ...+|.|+.|++++|.++|..||.....+..-            ..+..+....     +.  ...+...+..+++...+
T Consensus      1013 gs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f------------~ni~~~~~~~-----p~--g~~~~s~~aq~~~~~ll 1073 (1205)
T KOG0606|consen 1013 GSAADWWSSGVCLFEVLTGIPPFNAETPQQIF------------ENILNRDIPW-----PE--GPEEGSYEAQDLINRLL 1073 (1205)
T ss_pred             CCcchhhhhhhhhhhhhcCCCCCCCcchhhhh------------hccccCCCCC-----CC--CccccChhhhhhhhhhh
Confidence            99999999999999999999999765432211            1111111111     11  11222334455666778


Q ss_pred             CCCCCCCCCHH
Q 047157          755 HPDPNLRPSMK  765 (788)
Q Consensus       755 ~~dP~~RPt~~  765 (788)
                      ..+|.+|-.|.
T Consensus      1074 ~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1074 TEEPTQRLGAK 1084 (1205)
T ss_pred             ccCchhccCcc
Confidence            88999997776

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.65  E-value=4.2e-07  Score=94.05  Aligned_cols=138  Identities=15%  Similarity=0.090  Sum_probs=96.2

Q ss_pred             cceEEEEEEeccCcceeeeeeecccchH-HHHH----------HHHHHHHHhcCCCccc--cceEeeEEec-----CCeE
Q 047157          501 SGKVYRGILRLKDTQIEIAVKKLEKDIE-KTNE----------EFMTELKIIGRTHHKN--LVRLLGFCSE-----EDKR  562 (788)
Q Consensus       501 ~g~Vy~~~~~~~~~~~~vavK~l~~~~~-~~~~----------~~~~E~~~l~~l~hpn--iv~~~~~~~~-----~~~~  562 (788)
                      ...|++..+    .++.+.||+...... ...+          .+.+|.+.+.++...+  .++.+++.+.     ....
T Consensus        35 ~rrvvr~~~----~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s  110 (268)
T PRK15123         35 GRRTLRFEL----AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTS  110 (268)
T ss_pred             CceEEEEEE----CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcccee
Confidence            334556554    345788886643221 1111          3778998888875333  3455555543     2357


Q ss_pred             EEEEecCCCC-CHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccC--CCCCCCcEEEe
Q 047157          563 LLVYELMPNG-TLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLK--TLDTNYMAKIS  638 (788)
Q Consensus       563 ~lV~e~~~~g-sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~--~~~~~~~~kL~  638 (788)
                      +||+|++++. +|.+++... ....+...+..++.+++..+.-||..   ||+|+|++++|||++..  ...+...+.|+
T Consensus       111 ~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LI  187 (268)
T PRK15123        111 FIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLKLSVI  187 (268)
T ss_pred             EEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCceEEEE
Confidence            8999999886 899988532 23455667778999999999999999   99999999999999741  00135789999


Q ss_pred             ecCCccc
Q 047157          639 DFGISKL  645 (788)
Q Consensus       639 Dfg~a~~  645 (788)
                      ||+.+..
T Consensus       188 Dl~r~~~  194 (268)
T PRK15123        188 DLHRAQI  194 (268)
T ss_pred             ECCcccc
Confidence            9998863

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.60  E-value=2e-07  Score=90.87  Aligned_cols=126  Identities=21%  Similarity=0.230  Sum_probs=79.5

Q ss_pred             eEEEEEEeccCcceeeeeeecccch--------------------------HHHHHHHHHHHHHhcCCCcc--ccceEee
Q 047157          503 KVYRGILRLKDTQIEIAVKKLEKDI--------------------------EKTNEEFMTELKIIGRTHHK--NLVRLLG  554 (788)
Q Consensus       503 ~Vy~~~~~~~~~~~~vavK~l~~~~--------------------------~~~~~~~~~E~~~l~~l~hp--niv~~~~  554 (788)
                      .||.|..   ..+..+|||..+...                          ........+|.+.|.++..-  +++++++
T Consensus         1 ~Vy~~~~---~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~   77 (188)
T PF01163_consen    1 DVYHAID---PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYD   77 (188)
T ss_dssp             EEEEEEE---CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEE
T ss_pred             CEEEEEC---CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEE
Confidence            3788876   356688998753210                          11234578899999999754  5777776


Q ss_pred             EEecCCeEEEEEecCC--CCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHH-hhhccCCceEecCCCCCcEEeccCCCCC
Q 047157          555 FCSEEDKRLLVYELMP--NGTLSNFLFHEGQRPGWVQRVEIALGVARGLLY-LHEECETQIIHCDIKPQNVLLDLKTLDT  631 (788)
Q Consensus       555 ~~~~~~~~~lV~e~~~--~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~-LH~~~~~~ivH~dlkp~NIll~~~~~~~  631 (788)
                      +-    ...|||||++  +..+..+....   ++......++.+++..+.. +|..   +|+|+||.+.||+++     +
T Consensus        78 ~~----~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~-----~  142 (188)
T PF01163_consen   78 YN----RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVD-----D  142 (188)
T ss_dssp             EE----TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEE-----T
T ss_pred             Ee----CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEee-----c
Confidence            53    3479999998  65554433211   1123345677778885555 5677   999999999999997     4


Q ss_pred             CCcEEEeecCCccccC
Q 047157          632 NYMAKISDFGISKLLN  647 (788)
Q Consensus       632 ~~~~kL~Dfg~a~~~~  647 (788)
                      + .+.|+|||.+....
T Consensus       143 ~-~~~iIDf~qav~~~  157 (188)
T PF01163_consen  143 G-KVYIIDFGQAVDSS  157 (188)
T ss_dssp             T-CEEE--GTTEEETT
T ss_pred             c-eEEEEecCcceecC
Confidence            4 89999999887654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.51  E-value=9.8e-07  Score=88.29  Aligned_cols=108  Identities=22%  Similarity=0.309  Sum_probs=84.3

Q ss_pred             HHHHHHHHHhcCCCc--cccceEeeEEecCC----eEEEEEecCCCC-CHhHhhhccCCCCCHHHHHHHHHHHHHHHHHh
Q 047157          532 EEFMTELKIIGRTHH--KNLVRLLGFCSEED----KRLLVYELMPNG-TLSNFLFHEGQRPGWVQRVEIALGVARGLLYL  604 (788)
Q Consensus       532 ~~~~~E~~~l~~l~h--pniv~~~~~~~~~~----~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L  604 (788)
                      ....+|...+.+|..  -..++.+++.+...    ..+||+|++++. +|.+++..... .+......++.++++.++-|
T Consensus        56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~l  134 (206)
T PF06293_consen   56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAKL  134 (206)
T ss_pred             hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHHH
Confidence            467788888877753  34566777765532    458999999874 89999865323 56667788999999999999


Q ss_pred             hhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       605 H~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |+.   +|+|+|+++.|||++.+.  ....+.|+||+.+..
T Consensus       135 H~~---gi~H~Dl~~~NILv~~~~--~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  135 HDA---GIYHGDLNPSNILVDPDD--GQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHC---cCCCCCCCcccEEEeCCC--CceeEEEEcchhcee
Confidence            999   999999999999998443  445899999998765

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.47  E-value=8.1e-08  Score=106.86  Aligned_cols=151  Identities=21%  Similarity=0.268  Sum_probs=101.2

Q ss_pred             HHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCcc--------cccccCCccccC
Q 047157          594 ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT--------DTNMRGTMGYVA  665 (788)
Q Consensus       594 ~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~--------~~~~~gt~~y~a  665 (788)
                      +.+++.||.|+|..  .++||++|.|++|.++     ..+..||+.|+.+..........        ..-......|.|
T Consensus       105 l~~v~dgl~flh~s--Ak~VH~ni~p~~i~~n-----a~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~a  177 (700)
T KOG2137|consen  105 LGNVADGLAFLHRS--AKVVHGNIQPEAIVVN-----ANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLA  177 (700)
T ss_pred             hhcccchhhhhccC--cceeecccchhheeec-----cCcceeeccchhhhccCCCCccccccCCCCCChhhccCccccc
Confidence            34556999999987  6899999999999998     88899999999887654421111        011234567999


Q ss_pred             cccccCCCCCccCcchhhHHHHHHHH-hCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHH
Q 047157          666 PEWLRNVPVTTKVDVFSFGVMLLEII-CGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFE  744 (788)
Q Consensus       666 PE~~~~~~~s~k~DVwSlGvil~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  744 (788)
                      ||++.....++++|+||+|+++|.+. .|+.-+..........          ... ...+.       .......+.+.
T Consensus       178 pE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~----------~~~-~~~~~-------~~~~~s~~~p~  239 (700)
T KOG2137|consen  178 PEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS----------FSR-NLLNA-------GAFGYSNNLPS  239 (700)
T ss_pred             chhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhh----------hhh-ccccc-------ccccccccCcH
Confidence            99999988899999999999999999 5555554332111100          000 00000       01111123345


Q ss_pred             HHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          745 RMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       745 ~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ++.+=+.+++..++..||++.++..
T Consensus       240 el~~~l~k~l~~~~~~rp~~~~l~~  264 (700)
T KOG2137|consen  240 ELRESLKKLLNGDSAVRPTLDLLLS  264 (700)
T ss_pred             HHHHHHHHHhcCCcccCcchhhhhc
Confidence            5666666788999999998777643

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.31  E-value=4.2e-06  Score=83.88  Aligned_cols=136  Identities=15%  Similarity=0.157  Sum_probs=95.1

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch----------------------HHHHHHHHHHHHHhcCCCcc
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI----------------------EKTNEEFMTELKIIGRTHHK  547 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~----------------------~~~~~~~~~E~~~l~~l~hp  547 (788)
                      +.++..||-|.=+.||.|...   .+.+++||.=+...                      .-......+|.++|.+|...
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~---~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~  169 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP---KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE  169 (304)
T ss_pred             HhhccccccCccceEEEEECC---CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc
Confidence            345688999999999999874   56688888532110                      11234567899999988654


Q ss_pred             --ccceEeeEEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEec
Q 047157          548 --NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLD  625 (788)
Q Consensus       548 --niv~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  625 (788)
                        .+++.+++    +...+|||+.++-.|...-      ++....-.++..|++-+..+-..   ||||+|+.+-||+++
T Consensus       170 G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~  236 (304)
T COG0478         170 GVKVPKPIAW----NRHAVVMEYIEGVELYRLR------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVT  236 (304)
T ss_pred             CCCCCCcccc----ccceeeeehcccceeeccc------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEe
Confidence              67776654    5668999999987665432      12223334444455544444455   999999999999999


Q ss_pred             cCCCCCCCcEEEeecCCcccc
Q 047157          626 LKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       626 ~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                           +++.+.++||-.+...
T Consensus       237 -----~dg~~~vIDwPQ~v~~  252 (304)
T COG0478         237 -----EDGDIVVIDWPQAVPI  252 (304)
T ss_pred             -----cCCCEEEEeCcccccC
Confidence                 8889999999766543

>PRK09902 hypothetical protein; Provisional

Probab=98.24  E-value=9e-06  Score=79.76  Aligned_cols=138  Identities=14%  Similarity=0.114  Sum_probs=101.3

Q ss_pred             cccccceEEEEEEeccCcceeeeeeecccch------HHHHHHHHHHHHHhcCCCcc--ccceEeeEEe-c----CCeEE
Q 047157          497 GTGSSGKVYRGILRLKDTQIEIAVKKLEKDI------EKTNEEFMTELKIIGRTHHK--NLVRLLGFCS-E----EDKRL  563 (788)
Q Consensus       497 g~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~------~~~~~~~~~E~~~l~~l~hp--niv~~~~~~~-~----~~~~~  563 (788)
                      ++||-+.|+...+.   +. .+-+|+-+...      +-....|.+|...+.+|..-  .+++.. ++. .    ...-+
T Consensus        27 ~rgG~SgV~r~~~~---g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~  101 (216)
T PRK09902         27 RRNGMSGVQCVERN---GK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRAL  101 (216)
T ss_pred             CCCCcceEEEEEeC---Cc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEE
Confidence            67999999987663   22 68888775221      23457899999999988532  345555 332 1    12468


Q ss_pred             EEEecCCC-CCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          564 LVYELMPN-GTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       564 lV~e~~~~-gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      ||+|-+++ .+|.+++.+.. .+++...+..++.+++..++-||+.   ++.|+|+-+.||+++..   ....++++||.
T Consensus       102 LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~---g~~~v~lIDlE  175 (216)
T PRK09902        102 LVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTE---GKAEAGFLDLE  175 (216)
T ss_pred             EEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCC---CCeeEEEEEhh
Confidence            99997753 58988885532 3567778889999999999999999   99999999999999732   23459999998


Q ss_pred             Cccc
Q 047157          642 ISKL  645 (788)
Q Consensus       642 ~a~~  645 (788)
                      -++.
T Consensus       176 k~r~  179 (216)
T PRK09902        176 KSRR  179 (216)
T ss_pred             ccch
Confidence            7653

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.14  E-value=1.2e-05  Score=90.14  Aligned_cols=140  Identities=21%  Similarity=0.254  Sum_probs=89.3

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHH----------------------------------------HHH
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT----------------------------------------NEE  533 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~----------------------------------------~~~  533 (788)
                      +-|+.++-|.||+|+++   +++.||||+.+....+.                                        +-+
T Consensus       131 ~PiAsASIaQVH~A~L~---sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElD  207 (517)
T COG0661         131 EPIASASIAQVHRAVLK---SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELD  207 (517)
T ss_pred             CchhhhhHhhheeEEec---CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhC
Confidence            56899999999999995   57899999875432110                                        011


Q ss_pred             HHHHHHHhcCCC-----ccccceEeeEEe-cCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHH-HHHhhh
Q 047157          534 FMTELKIIGRTH-----HKNLVRLLGFCS-EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARG-LLYLHE  606 (788)
Q Consensus       534 ~~~E~~~l~~l~-----hpniv~~~~~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~a-L~~LH~  606 (788)
                      +.+|..-+.+++     .|+ +++=.++. -.....|+|||++|-.+.+....+....+...+   +..++++ +..+-.
T Consensus       208 y~~EA~n~~~~~~nf~~~~~-v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~i---a~~~~~~f~~q~~~  283 (517)
T COG0661         208 YRREAANAERFRENFKDDPD-VYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKEL---AELLVRAFLRQLLR  283 (517)
T ss_pred             HHHHHHHHHHHHHHcCCCCC-eEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHH---HHHHHHHHHHHHHh
Confidence            333444443331     222 22222232 245678999999999999886444344443332   2222221 111222


Q ss_pred             ccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       607 ~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      .   +++|.|.+|.||+++     .++++.+.|||+...+..
T Consensus       284 d---gffHaDpHpGNi~v~-----~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         284 D---GFFHADPHPGNILVR-----SDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             c---CccccCCCccceEEe-----cCCcEEEEcCcceecCCH
Confidence            3   899999999999998     788999999999887653

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.00  E-value=9.2e-05  Score=73.01  Aligned_cols=141  Identities=13%  Similarity=0.117  Sum_probs=88.5

Q ss_pred             HHHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHH---------HHHHHHhcCCC---ccccc
Q 047157          483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---------MTELKIIGRTH---HKNLV  550 (788)
Q Consensus       483 ~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~---------~~E~~~l~~l~---hpniv  550 (788)
                      +++....+...+++-......|.+-..    ++..+.+|..+......++.|         .+++..+.+++   --...
T Consensus        26 ~~i~~~~~~~~kv~k~~~r~~ValIei----~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~  101 (229)
T PF06176_consen   26 EKILDNNYKIIKVFKNTKRNYVALIEI----DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPA  101 (229)
T ss_pred             HHHHhCCceEEEeecCCCccEEEEEEE----CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccc
Confidence            445555666667777777777776654    345788887765433222222         22333333332   22222


Q ss_pred             eEeeEE-----ecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEec
Q 047157          551 RLLGFC-----SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLD  625 (788)
Q Consensus       551 ~~~~~~-----~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  625 (788)
                      .++.+.     .-....+++|||++|..|.++..     ++.    .++..|.+++.-||+.   |++|+|.+|.|++++
T Consensus       102 ~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~  169 (229)
T PF06176_consen  102 DPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVS  169 (229)
T ss_pred             cceeeeeeeeccceeEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEE
Confidence            222222     22345578999999988876541     111    3556677889999999   999999999999996


Q ss_pred             cCCCCCCCcEEEeecCCccc
Q 047157          626 LKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       626 ~~~~~~~~~~kL~Dfg~a~~  645 (788)
                            +..++++||+..+.
T Consensus       170 ------~~~i~iID~~~k~~  183 (229)
T PF06176_consen  170 ------NNGIRIIDTQGKRM  183 (229)
T ss_pred             ------CCcEEEEECccccc
Confidence                  34599999987653

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.97  E-value=2.1e-06  Score=94.55  Aligned_cols=182  Identities=17%  Similarity=0.117  Sum_probs=130.6

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccc-cceEeeEEecCCeEEEEEecCCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKN-LVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpn-iv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      +-++++++++++|.+..  .+. .+..+.+...     ....-++++|.+++||| .++.++-++.+...+++++++..+
T Consensus       248 h~fvK~altknpKkRpt--aek-lL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~  319 (829)
T KOG0576|consen  248 HNFVKGALTKNPKKRPT--AEK-LLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTG  319 (829)
T ss_pred             HHHHHHHhcCCCccCCC--hhh-heeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCC
Confidence            44678999999987543  222 2334444322     45567889999999999 677777777788899999999876


Q ss_pred             -CHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCC
Q 047157          573 -TLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT  651 (788)
Q Consensus       573 -sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~  651 (788)
                       +-..........+...+...+.+.-.++|++||+.   .=+|+|    ||+.      .+...|..||+....+.+.. 
T Consensus       320 rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~------s~~~~~~~~~~v~~~L~~~~-  385 (829)
T KOG0576|consen  320 RSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILG------SEEEVKLLDFAVPPQLTRTM-  385 (829)
T ss_pred             ccccccCChhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccc------cccccccccccCCcccCccc-
Confidence             22222211122334445556777778899999986   558888    8886      45678999999988776543 


Q ss_pred             cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCC
Q 047157          652 RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIE  698 (788)
Q Consensus       652 ~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~  698 (788)
                       ......+++.++|||......+..+-|+|++|+---++.-|..|-.
T Consensus       386 -~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~  431 (829)
T KOG0576|consen  386 -KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS  431 (829)
T ss_pred             -ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence             3344678999999999999999999999999987777776666543

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=97.97  E-value=7.8e-05  Score=75.61  Aligned_cols=72  Identities=15%  Similarity=0.241  Sum_probs=52.8

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccc--cceEeeEEecCCeEEEEEecCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKN--LVRLLGFCSEEDKRLLVYELMPN  571 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpn--iv~~~~~~~~~~~~~lV~e~~~~  571 (788)
                      ..||+|..+.||+.     . +..+++|......  ......+|.++++.+..-.  +.+.+++....+...+|||+++|
T Consensus         7 ~~i~~G~t~~~y~~-----~-~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G   78 (226)
T TIGR02172         7 TQTGEGGNGESYTH-----K-TGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG   78 (226)
T ss_pred             eeecCCCCcceeEe-----c-CCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence            56899999999973     1 2256677765432  2345688999998886433  57788888888888999999988


Q ss_pred             CC
Q 047157          572 GT  573 (788)
Q Consensus       572 gs  573 (788)
                      ..
T Consensus        79 ~~   80 (226)
T TIGR02172        79 KR   80 (226)
T ss_pred             cc
Confidence            63

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.85  E-value=8.7e-05  Score=83.09  Aligned_cols=145  Identities=18%  Similarity=0.214  Sum_probs=92.5

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHH-------------------------------HHH------HHHH
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK-------------------------------TNE------EFMT  536 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~-------------------------------~~~------~~~~  536 (788)
                      +.||.-+.|.||+|+++   +++.||||+-+....+                               ..+      +|.+
T Consensus       167 ~piaaASlaQVhrA~L~---~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~  243 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLK---NGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTK  243 (538)
T ss_pred             chhhhcchhheEEEEec---CCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHH
Confidence            56999999999999996   4779999986533211                               111      2334


Q ss_pred             HHHHhcC----CCccc------cceEeeEEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhh
Q 047157          537 ELKIIGR----THHKN------LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE  606 (788)
Q Consensus       537 E~~~l~~----l~hpn------iv~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~  606 (788)
                      |.+-..+    +.|-+      |++++--  -.....|+||||+|..+.+.-.-....++...+..-+.++.     ++.
T Consensus       244 EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~--~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~-----~~q  316 (538)
T KOG1235|consen  244 EAKNAERFRENFKDFSLLTYVLVPKVYWD--LSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAY-----LEQ  316 (538)
T ss_pred             HHHhHHHHHHHHHhcccccceeCCeehhh--cCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHH-----HHH
Confidence            4433332    23444      3333322  23467899999999988877544444555554433333222     221


Q ss_pred             ccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       607 ~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      .-..|++|+|-+|.||+++... ..+..+.+-|||+...+...
T Consensus       317 If~~GffHaDPHPGNilv~~~~-~~~~~ivllDhGl~~~is~~  358 (538)
T KOG1235|consen  317 IFKTGFFHADPHPGNILVRPNP-EGDEEIVLLDHGLYAVISHK  358 (538)
T ss_pred             HHhcCCccCCCCCCcEEEecCC-CCCccEEEEcccccccccHH
Confidence            1223899999999999998543 25788999999999876543

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.84  E-value=0.00013  Score=72.75  Aligned_cols=136  Identities=17%  Similarity=0.170  Sum_probs=88.3

Q ss_pred             cccccccceEEEEEEeccCcceeeeeeecccchHHHH------------------------HHHHHHHHHhcCCC--ccc
Q 047157          495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN------------------------EEFMTELKIIGRTH--HKN  548 (788)
Q Consensus       495 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~------------------------~~~~~E~~~l~~l~--hpn  548 (788)
                      .|+.|.=+.||+|..   ..+..+|||+.........                        .-..+|..-|.++.  +-.
T Consensus        55 ~istGKEA~Vy~a~~---~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr  131 (268)
T COG1718          55 CISTGKEANVYLAET---GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR  131 (268)
T ss_pred             eecCCcceEEEeecc---CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            577888899999875   4677999998854321111                        01245666666652  344


Q ss_pred             cceEeeEEecCCeEEEEEecCCCCCH-hHhhhccCCCCCHHHHHHHHHHHHHHHHHhhh-ccCCceEecCCCCCcEEecc
Q 047157          549 LVRLLGFCSEEDKRLLVYELMPNGTL-SNFLFHEGQRPGWVQRVEIALGVARGLLYLHE-ECETQIIHCDIKPQNVLLDL  626 (788)
Q Consensus       549 iv~~~~~~~~~~~~~lV~e~~~~gsL-~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~  626 (788)
                      +++-+++.    .-.|||||+....+ .-.|.  ...+...+...+..++++.+.-|-. .   ++||+||..-|||+. 
T Consensus       132 vP~Pi~~~----~nVLvMEfIg~~g~pAP~Lk--Dv~~e~~e~~~~~~~~v~~~~~l~~~a---~LVHgDLSEyNiL~~-  201 (268)
T COG1718         132 VPEPIAFR----NNVLVMEFIGDDGLPAPRLK--DVPLELEEAEGLYEDVVEYMRRLYKEA---GLVHGDLSEYNILVH-  201 (268)
T ss_pred             CCCceeec----CCeEEEEeccCCCCCCCCcc--cCCcCchhHHHHHHHHHHHHHHHHHhc---CcccccchhhheEEE-
Confidence            44555443    34699999864311 11111  1122233556677788888887776 5   999999999999994 


Q ss_pred             CCCCCCCcEEEeecCCccccCC
Q 047157          627 KTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       627 ~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                           ++.+.|+|++.+....+
T Consensus       202 -----~~~p~iID~~QaV~~~h  218 (268)
T COG1718         202 -----DGEPYIIDVSQAVTIDH  218 (268)
T ss_pred             -----CCeEEEEECccccccCC
Confidence                 56899999999886543

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.80  E-value=0.00015  Score=74.65  Aligned_cols=75  Identities=16%  Similarity=0.183  Sum_probs=52.4

Q ss_pred             cccccc-ceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC-ccccceEeeEEecCCeEEEEEecCCCCC
Q 047157          496 VGTGSS-GKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDKRLLVYELMPNGT  573 (788)
Q Consensus       496 lg~G~~-g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lV~e~~~~gs  573 (788)
                      |..|.. ..||+....    +..+.+|......   ...+.+|+++++.+. +--+++++++....+..++|||+++|.+
T Consensus         6 ~~~g~~~~~v~~~~~~----~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~   78 (244)
T cd05150           6 VTEGQSGATVYRLDGK----NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVP   78 (244)
T ss_pred             cCCCCCcCeEEEEcCC----CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCcc
Confidence            444555 788987542    2478888876542   335667888887773 4456788888777777899999999988


Q ss_pred             HhHh
Q 047157          574 LSNF  577 (788)
Q Consensus       574 L~~~  577 (788)
                      |...
T Consensus        79 l~~~   82 (244)
T cd05150          79 AAAL   82 (244)
T ss_pred             HhHh
Confidence            7644

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.75  E-value=0.00029  Score=69.35  Aligned_cols=131  Identities=19%  Similarity=0.301  Sum_probs=89.6

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch----------------HHHHHHHHHHHHHhcCCC------ccccce
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI----------------EKTNEEFMTELKIIGRTH------HKNLVR  551 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~----------------~~~~~~~~~E~~~l~~l~------hpniv~  551 (788)
                      ..||+|+.-.||.  ++   ......||+.....                ....++..+|+.-...+.      +.+|.+
T Consensus         7 ~~i~~G~~R~cy~--HP---~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r   81 (199)
T PF10707_consen    7 DLIAQGGERDCYQ--HP---DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPR   81 (199)
T ss_pred             cccccCCCceEEE--CC---CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccccc
Confidence            5799999999995  33   23356677765443                122455566665554444      889999


Q ss_pred             EeeEEecCCeEEEEEecCCC------CCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEec
Q 047157          552 LLGFCSEEDKRLLVYELMPN------GTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLD  625 (788)
Q Consensus       552 ~~~~~~~~~~~~lV~e~~~~------gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  625 (788)
                      ++|+.+++...-+|+|.+.+      .+|.+++.+.  .++.    .+...+-+-..||-+.   .|+.+||+|.||++.
T Consensus        82 ~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~--~~~~----~~~~~L~~f~~~l~~~---~Iv~~dl~~~NIv~~  152 (199)
T PF10707_consen   82 FYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG--GLTE----ELRQALDEFKRYLLDH---HIVIRDLNPHNIVVQ  152 (199)
T ss_pred             EeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC--CccH----HHHHHHHHHHHHHHHc---CCeecCCCcccEEEE
Confidence            99999999999999998643      3688888443  3433    2333444555677777   899999999999998


Q ss_pred             cCCCCCCCcEEEee
Q 047157          626 LKTLDTNYMAKISD  639 (788)
Q Consensus       626 ~~~~~~~~~~kL~D  639 (788)
                      .... ....+.|+|
T Consensus       153 ~~~~-~~~~lvlID  165 (199)
T PF10707_consen  153 RRDS-GEFRLVLID  165 (199)
T ss_pred             ecCC-CceEEEEEe
Confidence            5541 223677877

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.71  E-value=0.00011  Score=71.90  Aligned_cols=102  Identities=24%  Similarity=0.296  Sum_probs=80.9

Q ss_pred             HHHHHhcCCCc-cccceEeeEEecCCeEEEEEecCCCCCHhHhhh--ccCCCCCHHHHHHHHHHHHHHHHHhhhccCCce
Q 047157          536 TELKIIGRTHH-KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF--HEGQRPGWVQRVEIALGVARGLLYLHEECETQI  612 (788)
Q Consensus       536 ~E~~~l~~l~h-pniv~~~~~~~~~~~~~lV~e~~~~gsL~~~l~--~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~i  612 (788)
                      +|.-+++.+++ +++++++|+|-    .++|.||...+++...-.  ..-...+|..|.+|+.++++.+.+|+......+
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~   83 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFF   83 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence            57778888865 69999999993    378999998776542210  011246899999999999999999998655468


Q ss_pred             EecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       613 vH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      .-.|++++|+-++     +++++|++|...+...
T Consensus        84 ~lcDv~~~nfgv~-----~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   84 YLCDVSPDNFGVN-----DDGRLKLIDLDDVFVE  112 (188)
T ss_pred             EEeecchHHeEEe-----CCCcEEEEechhcchh
Confidence            8899999999998     7889999999877654

Proteins in this uncharacterised family are described as transmembrane proteins.

>smart00473 PAN_AP divergent subfamily of APPLE domains

Probab=97.69  E-value=6.2e-05  Score=62.15  Aligned_cols=69  Identities=14%  Similarity=0.156  Sum_probs=47.9

Q ss_pred             eEeeeccccccccccccccccccCCHHHHHHHhhc-cccccccccc--CCceeecc-ccccccccccccCCceeEEe
Q 047157          336 TVEVMDDAGFLFDNFADLARVSNVDVEGCRKAVMD-DCYSLGASLV--GSTCVKTR-MPLLNARKSASTKGMKAIIK  408 (788)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~C~~~Cl~-nCsC~a~~~~--~~~C~~w~-~~L~~~~~~~~~~~~~~~ik  408 (788)
                      .|..++++.++....   ......++++|++.|++ +|+|.|+.|.  +++|.+|. .++.+.+... ..+.++|.|
T Consensus         5 ~f~~~~~~~l~~~~~---~~~~~~s~~~C~~~C~~~~~~C~s~~y~~~~~~C~l~~~~~~~~~~~~~-~~~~~~y~~   77 (78)
T smart00473        5 CFVRLPNTKLPGFSR---IVISVASLEECASKCLNSNCSCRSFTYNNGTKGCLLWSESSLGDARLFP-SGGVDLYEK   77 (78)
T ss_pred             eeEEecCccCCCCcc---eeEcCCCHHHHHHHhCCCCCceEEEEEcCCCCEEEEeeCCccccceecc-cCCceeEEe
Confidence            466667766653222   11345789999999999 9999999996  68999999 7777776322 223445543

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=97.60  E-value=0.00022  Score=63.86  Aligned_cols=82  Identities=30%  Similarity=0.467  Sum_probs=55.1

Q ss_pred             EEEecCCceEEEeCC-CcEEEEeccc-----ccccccCCCCcEEEEecCCceeecccCCCCCcccCCccccCCCeEEeec
Q 047157           91 ITLTNDGKLLLTYFN-GSVQQIYSGA-----ASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNS  164 (788)
Q Consensus        91 l~l~~~G~L~l~~~~-~~~~~~~s~~-----~~~a~LldsGNlVl~~~~~~~lWqSFD~PtDtllpg~~l~~g~~l~s~~  164 (788)
                      +....||+||+.... +...|..++.     ...+.|.++|||||++.++.++|+|=.   .                  
T Consensus        24 ~~~q~dgnlV~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~t---~------------------   82 (114)
T smart00108       24 LIMQNDYNLILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGDGRVVWSSNT---T------------------   82 (114)
T ss_pred             cCCCCCEEEEEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCEEEEeCCCCEEEEecc---c------------------
Confidence            344578999998764 2444433332     135788899999999999999999811   0                  


Q ss_pred             CCCCCCCCCceEEeeccCCcceeeecccCCCCCccc
Q 047157          165 RGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYT  200 (788)
Q Consensus       165 ~~~~dps~G~~~~~~~~~g~~~~~~~~~~~~~yw~~  200 (788)
                           ...|.+.+.|+.+|+++++..  .....|.+
T Consensus        83 -----~~~~~~~~~L~ddGnlvl~~~--~~~~~W~S  111 (114)
T smart00108       83 -----GANGNYVLVLLDDGNLVIYDS--DGNFLWQS  111 (114)
T ss_pred             -----CCCCceEEEEeCCCCEEEECC--CCCEEeCC
Confidence                 124678899999999876532  23346655

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.56  E-value=0.00048  Score=70.14  Aligned_cols=77  Identities=19%  Similarity=0.292  Sum_probs=55.0

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCcc--ccceEeeEEec---CCeEEEEEec
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHK--NLVRLLGFCSE---EDKRLLVYEL  568 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hp--niv~~~~~~~~---~~~~~lV~e~  568 (788)
                      +.|+.|..+.||+....   + ..+++|.....  .....+.+|..+++.+...  .+.+++.+...   ....+++|++
T Consensus         3 ~~l~~G~~n~~~~v~~~---~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~   76 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTD---D-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEY   76 (239)
T ss_dssp             EEEEESSSSEEEEEEET---T-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEE
T ss_pred             ccCCCCCeeeEEEEEEC---C-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEE
Confidence            56888999999998763   3 38889987654  4556777888888877433  35677765433   3357899999


Q ss_pred             CCCCCHhH
Q 047157          569 MPNGTLSN  576 (788)
Q Consensus       569 ~~~gsL~~  576 (788)
                      +++..+..
T Consensus        77 i~g~~~~~   84 (239)
T PF01636_consen   77 IPGRPLDD   84 (239)
T ss_dssp             ESSEEHHH
T ss_pred             eccccccc
Confidence            99988877

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=97.56  E-value=0.00021  Score=64.22  Aligned_cols=81  Identities=31%  Similarity=0.444  Sum_probs=54.6

Q ss_pred             Eec-CCceEEEeCCC-cEEEEeccc-----ccccccCCCCcEEEEecCCceeecccCCCCCcccCCccccCCCeEEeecC
Q 047157           93 LTN-DGKLLLTYFNG-SVQQIYSGA-----ASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSR  165 (788)
Q Consensus        93 l~~-~G~L~l~~~~~-~~~~~~s~~-----~~~a~LldsGNlVl~~~~~~~lWqSFD~PtDtllpg~~l~~g~~l~s~~~  165 (788)
                      ... +|+||+.+... +..|..++.     ...+.|.++|||||.+.++.++|||=-                       
T Consensus        26 ~q~~dgnlv~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~~-----------------------   82 (116)
T cd00028          26 MQSRDYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGSGTVVWSSNT-----------------------   82 (116)
T ss_pred             CCCCeEEEEEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCeEEEcCCCcEEEEecc-----------------------
Confidence            344 89999987542 444433332     235788899999999999999999821                       


Q ss_pred             CCCCCCCCceEEeeccCCcceeeecccCCCCCcccC
Q 047157          166 GTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTG  201 (788)
Q Consensus       166 ~~~dps~G~~~~~~~~~g~~~~~~~~~~~~~yw~~~  201 (788)
                       ..  +.+.+.+.|+.+|++.++...  ....|.+.
T Consensus        83 -~~--~~~~~~~~L~ddGnlvl~~~~--~~~~W~Sf  113 (116)
T cd00028          83 -TR--VNGNYVLVLLDDGNLVLYDSD--GNFLWQSF  113 (116)
T ss_pred             -cC--CCCceEEEEeCCCCEEEECCC--CCEEEcCC
Confidence             00  247788999999998865432  34467553

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>PLN02876 acyl-CoA dehydrogenase

Probab=97.52  E-value=0.00087  Score=81.40  Aligned_cols=81  Identities=10%  Similarity=0.212  Sum_probs=55.7

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCC-cccc--ceEeeEEecC---CeEEEEE
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTH-HKNL--VRLLGFCSEE---DKRLLVY  566 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~-hpni--v~~~~~~~~~---~~~~lV~  566 (788)
                      +.++.|.+..+|+...........+++|+..... ......+.+|.++++.+. |+++  ++++.+|.+.   +..++||
T Consensus        44 ~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVM  123 (822)
T PLN02876         44 SQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIM  123 (822)
T ss_pred             EEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEE
Confidence            5678899999998766422212356666654321 122356789999999985 6665  8888888764   4678999


Q ss_pred             ecCCCCCH
Q 047157          567 ELMPNGTL  574 (788)
Q Consensus       567 e~~~~gsL  574 (788)
                      ||+++..+
T Consensus       124 E~v~G~~~  131 (822)
T PLN02876        124 EYLEGRIF  131 (822)
T ss_pred             EecCCccc
Confidence            99988653

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.42  E-value=0.0012  Score=64.54  Aligned_cols=134  Identities=25%  Similarity=0.364  Sum_probs=93.7

Q ss_pred             CCcccCHHHHHHHhhccccccccccc-ceEEEEEEeccCcceeeeeeeccc-----------chH----------HHHHH
Q 047157          476 NFREFTFQELQEATKGFSKLVGTGSS-GKVYRGILRLKDTQIEIAVKKLEK-----------DIE----------KTNEE  533 (788)
Q Consensus       476 ~~~~~~~~~l~~~t~~~~~~lg~G~~-g~Vy~~~~~~~~~~~~vavK~l~~-----------~~~----------~~~~~  533 (788)
                      .+..|+...   ....+.+.||.|.- |.||++...    +..+|+|....           ...          .....
T Consensus        28 KL~~F~~h~---~~I~flefLg~g~~~~~V~kv~I~----g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~P  100 (207)
T PF13095_consen   28 KLEPFTHHG---DDIEFLEFLGHGSHDGYVFKVEID----GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADP  100 (207)
T ss_pred             CcCCcCCCC---CcEeeeeecCCCCceeEEEEEEEC----CeEEEEEEeeccccCCCccccccccccccccchhhhhcCh
Confidence            455666622   56677899999999 999999883    45999998321           000          12346


Q ss_pred             HHHHHHHhcCCC---cccc--ceEeeEEecC------------------CeEEEEEecCCCCCHhHhhhccCCCCCHHHH
Q 047157          534 FMTELKIIGRTH---HKNL--VRLLGFCSEE------------------DKRLLVYELMPNGTLSNFLFHEGQRPGWVQR  590 (788)
Q Consensus       534 ~~~E~~~l~~l~---hpni--v~~~~~~~~~------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~  590 (788)
                      |..|.+...+|+   +.++  |+++||..-.                  ....||.||++...          .+    .
T Consensus       101 F~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~----~  166 (207)
T PF13095_consen  101 FNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PL----Q  166 (207)
T ss_pred             HHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------cc----c
Confidence            889999988884   4466  8999987211                  12357888775432          11    1


Q ss_pred             HHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       591 ~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      ..-+.+|.+-|..+|..   +|+-+|+++.|..=          -||+|||.+
T Consensus       167 ~~~~~~~~~dl~~~~k~---gI~~~Dv~~~ny~~----------G~lvDfs~~  206 (207)
T PF13095_consen  167 IRDIPQMLRDLKILHKL---GIVPRDVKPRNYRG----------GKLVDFSSS  206 (207)
T ss_pred             hhHHHHHHHHHHHHHHC---CeeeccCccccccC----------CEEEecccC
Confidence            23456777888889998   99999999999872          489999864

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.41  E-value=0.00083  Score=63.37  Aligned_cols=127  Identities=21%  Similarity=0.263  Sum_probs=86.6

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCcccc-ceEeeEEecCCeEEEEEecCCC
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNL-VRLLGFCSEEDKRLLVYELMPN  571 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpni-v~~~~~~~~~~~~~lV~e~~~~  571 (788)
                      .+.|++|.+|.||++.+.    +..+|+|.-+.+.  ....+..|.++|..+.--++ .+++.+-.+    .+.|||..|
T Consensus        27 ~~~L~KG~~s~Vyl~~~~----~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i~G   96 (201)
T COG2112          27 EKELAKGTTSVVYLGEWR----GGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEYIDG   96 (201)
T ss_pred             hhhhhcccccEEEEeecc----CceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhhhcC
Confidence            578999999999999874    3488888876543  35678899999998876655 345544322    355999998


Q ss_pred             CCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCC-C-CcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          572 GTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIK-P-QNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       572 gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlk-p-~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ..|.+.-...    +-.    -...+++.---|...   ||-|+.|. | .||++      .+..+.|+||..|...
T Consensus        97 ~~L~~~~~~~----~rk----~l~~vlE~a~~LD~~---GI~H~El~~~~k~vlv------~~~~~~iIDFd~At~k  156 (201)
T COG2112          97 RPLGKLEIGG----DRK----HLLRVLEKAYKLDRL---GIEHGELSRPWKNVLV------NDRDVYIIDFDSATFK  156 (201)
T ss_pred             cchhhhhhcc----cHH----HHHHHHHHHHHHHHh---ccchhhhcCCceeEEe------cCCcEEEEEccchhhc
Confidence            8887765221    122    233444443334444   89999887 3 45665      4458999999998743

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.26  E-value=0.0013  Score=67.32  Aligned_cols=73  Identities=15%  Similarity=0.167  Sum_probs=44.3

Q ss_pred             ccccccccc-eEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCcc---ccceEeeEEecCC---eEEEEE
Q 047157          494 KLVGTGSSG-KVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHK---NLVRLLGFCSEED---KRLLVY  566 (788)
Q Consensus       494 ~~lg~G~~g-~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hp---niv~~~~~~~~~~---~~~lV~  566 (788)
                      +.|+.|+.. .||+.     +  ..+++|.....  .....+.+|.+++..+...   -+.++++.....+   ..+++|
T Consensus         3 ~~~~~gG~~n~vy~~-----~--~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~   73 (235)
T cd05155           3 EPVDSGGTDNATFRL-----G--DDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVY   73 (235)
T ss_pred             eeccCCCcccceEEc-----C--CceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEE
Confidence            346666665 58864     1  14566765432  2244788899988877532   3455555443322   348899


Q ss_pred             ecCCCCCHh
Q 047157          567 ELMPNGTLS  575 (788)
Q Consensus       567 e~~~~gsL~  575 (788)
                      |+++|.++.
T Consensus        74 ~~i~G~~l~   82 (235)
T cd05155          74 RWLEGETAT   82 (235)
T ss_pred             EeecCCCCC
Confidence            999987764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.13  E-value=0.0017  Score=77.10  Aligned_cols=197  Identities=21%  Similarity=0.181  Sum_probs=129.8

Q ss_pred             HHHHHHHHhcCCCccccceEeeEEecCCeEE----EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcc
Q 047157          533 EFMTELKIIGRTHHKNLVRLLGFCSEEDKRL----LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC  608 (788)
Q Consensus       533 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~----lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  608 (788)
                      ....|+..+.++.|+|++.++.|-.++...-    +..|++..-++...+.+. ...+......+..++..||+|+|+. 
T Consensus       228 ~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v-~~i~~~~~r~~~~~~~~GL~~~h~~-  305 (1351)
T KOG1035|consen  228 TTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSV-GSIPLETLRILHQKLLEGLAYLHSL-  305 (1351)
T ss_pred             HHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhc-cccCHHHHHHHHHHHhhhHHHHHHh-
Confidence            3455777788889999999999876544332    445778888888777554 4567777788899999999999997 


Q ss_pred             CCceEecCCCCC---cEEeccCCCCCCCcEEEe--ecCCccccCCCCCcccccccCCccccCcccccCCCCCcc--Ccch
Q 047157          609 ETQIIHCDIKPQ---NVLLDLKTLDTNYMAKIS--DFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTK--VDVF  681 (788)
Q Consensus       609 ~~~ivH~dlkp~---NIll~~~~~~~~~~~kL~--Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k--~DVw  681 (788)
                        ...|.-+..+   +.-.+     ..+.+.++  ||+....+.......  .......+.+||.......+.+  .|+|
T Consensus       306 --~l~~v~L~~s~~~~~~~~-----~e~~~~~sl~~~~ss~~l~d~~~~~--~~~~~~~~~~~e~~~~~~~~~~r~~dL~  376 (1351)
T KOG1035|consen  306 --SLEHVVLSASSSKESTVD-----GEGVVAISLSDFDSSKPLPDNEKSF--SDLLAEIRNADEDLKENTAKKSRLTDLW  376 (1351)
T ss_pred             --ccceeEEecccccccccC-----ccceeecchhhhcccccCCCcccch--hhcCccccccccccccccchhhhhhHHH
Confidence              4444444333   22222     45566666  888877654332221  1223456788888776655544  7999


Q ss_pred             hhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCC
Q 047157          682 SFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLR  761 (788)
Q Consensus       682 SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R  761 (788)
                      .+|.++..+..|..+-......                       ..+++.    ..    ...+.+....|+..++++|
T Consensus       377 ~lgll~~~~~~~~~i~~~~~~~-----------------------~~~l~~----~~----~~~~~d~~~~~~~~~~~~R  425 (1351)
T KOG1035|consen  377 CLGLLLLQLSQGEDISEKSAVP-----------------------VSLLDV----LS----TSELLDALPKCLDEDSEER  425 (1351)
T ss_pred             HHHHHHhhhhhcCcccccccch-----------------------hhhhcc----cc----chhhhhhhhhhcchhhhhc
Confidence            9999999999887654322100                       000000    00    0034456667999999999


Q ss_pred             CCHHHHHHHh
Q 047157          762 PSMKKVIHML  771 (788)
Q Consensus       762 Pt~~evl~~L  771 (788)
                      +++.+++.+.
T Consensus       426 l~~~~ll~~~  435 (1351)
T KOG1035|consen  426 LSALELLTHP  435 (1351)
T ss_pred             cchhhhhhch
Confidence            9999998765

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.08  E-value=0.0038  Score=63.81  Aligned_cols=75  Identities=23%  Similarity=0.234  Sum_probs=45.7

Q ss_pred             ccccccccceEEEEEEeccC-cceeeeeeecccchHHHHHHHHHHHHHhcCCC-ccccceEeeEEecCCeEEEEEecCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDKRLLVYELMPN  571 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lV~e~~~~  571 (788)
                      +.|..|-...+|+....  . .+..+++|........ .-...+|+.+++.+. +.-.+++++....    .+||||++|
T Consensus         4 ~~l~gG~tN~~~~v~~~--~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~~----~~l~e~i~G   76 (235)
T cd05157           4 KRFTGGITNKLVKVSNK--EDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQN----GLIYEFIPG   76 (235)
T ss_pred             EEcCCcccceEEEEEcC--CCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeCC----cEEEEeeCC
Confidence            45677778899987642  1 2457888876543221 123346888888774 3334555554332    479999998


Q ss_pred             CCHh
Q 047157          572 GTLS  575 (788)
Q Consensus       572 gsL~  575 (788)
                      .++.
T Consensus        77 ~~l~   80 (235)
T cd05157          77 RTLE   80 (235)
T ss_pred             CcCC
Confidence            7653

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK10593 hypothetical protein; Provisional

Probab=97.04  E-value=0.011  Score=62.70  Aligned_cols=75  Identities=7%  Similarity=-0.023  Sum_probs=53.4

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCc---cccceEeeEEec---CCeEEEEEe
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHH---KNLVRLLGFCSE---EDKRLLVYE  567 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h---pniv~~~~~~~~---~~~~~lV~e  567 (788)
                      +.||.|..+.||+....   ++ .+.+|..+..  .....+..|.+.++.+..   ..++++++++..   .+..+||||
T Consensus        20 ~~i~~G~~~~vy~~~~~---~~-~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE   93 (297)
T PRK10593         20 ECISEQPYAALWALYDS---QG-NPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLE   93 (297)
T ss_pred             eecCCccceeEEEEEcC---CC-CEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEe
Confidence            57999999999987542   23 4566664321  123477889998888742   468889988754   366899999


Q ss_pred             cCCCCCH
Q 047157          568 LMPNGTL  574 (788)
Q Consensus       568 ~~~~gsL  574 (788)
                      ++++.++
T Consensus        94 ~i~G~~~  100 (297)
T PRK10593         94 RLRGVSV  100 (297)
T ss_pred             ccCCEec
Confidence            9998765

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=96.93  E-value=0.005  Score=54.95  Aligned_cols=97  Identities=25%  Similarity=0.384  Sum_probs=57.2

Q ss_pred             CeeecCCCeEEEeeeecCCCceEEEEEeCCCCCCeEEEEec-CCCCCCCCcEEEEecCCceEEEeCCCcEEEEeccccc-
Q 047157           40 TSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAAD-RDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSGAAS-  117 (788)
Q Consensus        40 ~~~vS~~g~F~lGFf~~~~~~~y~giw~~~~~~~tvVWvAN-r~~p~~~~s~l~l~~~G~L~l~~~~~~~~~~~s~~~~-  117 (788)
                      +++.+.+|.+.|-|-.-|+    |-| |+  ...++||.++ ........+.+.|..+|||||.|.++++.|.+ .... 
T Consensus        12 ~p~~~~s~~~~L~l~~dGn----Lvl-~~--~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~S-f~~pt   83 (114)
T PF01453_consen   12 SPLTSSSGNYTLILQSDGN----LVL-YD--SNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQS-FDYPT   83 (114)
T ss_dssp             EEEEECETTEEEEEETTSE----EEE-EE--TTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEES-TTSSS
T ss_pred             cccccccccccceECCCCe----EEE-Ec--CCCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEee-cCCCc
Confidence            3454545778777765332    222 22  2367799994 33333356789999999999999777653322 3322 


Q ss_pred             --ccccCC--CCcEEEEecCCceeecccCCCC
Q 047157          118 --LALMQN--DGNFVLKNANSAVVWDSFDFPT  145 (788)
Q Consensus       118 --~a~Lld--sGNlVl~~~~~~~lWqSFD~Pt  145 (788)
                        ....++  .||++ ......+.|.|=+.|+
T Consensus        84 dt~L~~q~l~~~~~~-~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   84 DTLLPGQKLGDGNVT-GKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             -EEEEEET--TSEEE-EESTSSEEEESS----
T ss_pred             cEEEeccCcccCCCc-cccceEEeECCCCCCC
Confidence              233334  78888 7777889999977774

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=96.92  E-value=0.011  Score=64.65  Aligned_cols=76  Identities=14%  Similarity=0.143  Sum_probs=52.3

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccc-------hHHHHHHHHHHHHHhcCCC---ccccceEeeEEecCCeEE
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-------IEKTNEEFMTELKIIGRTH---HKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~-------~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~  563 (788)
                      +.||.|.+..||++...  ++++.|+||.-...       ..-..+++..|.+.|..+.   ..++++++.+  +.+..+
T Consensus        32 ~elggGn~N~VyrV~~~--~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~  107 (401)
T PRK09550         32 REIGDGNLNLVFRVSDT--EGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAV  107 (401)
T ss_pred             eEcCCCceEEEEEEEeC--CCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCE
Confidence            57899999999999874  33357899974311       1123456677888777652   3467788876  445678


Q ss_pred             EEEecCCCCC
Q 047157          564 LVYELMPNGT  573 (788)
Q Consensus       564 lV~e~~~~gs  573 (788)
                      +|||++++..
T Consensus       108 lVME~L~~~~  117 (401)
T PRK09550        108 TVMEDLSDHK  117 (401)
T ss_pred             EEEecCCCcc
Confidence            9999987643

>TIGR02721 ycfN_thiK thiamine kinase

Probab=96.83  E-value=0.005  Score=63.87  Aligned_cols=136  Identities=13%  Similarity=0.117  Sum_probs=74.1

Q ss_pred             ccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCcccc-ceEeeEEecCCeEEEEEecCCCCCH
Q 047157          496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNL-VRLLGFCSEEDKRLLVYELMPNGTL  574 (788)
Q Consensus       496 lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpni-v~~~~~~~~~~~~~lV~e~~~~gsL  574 (788)
                      +..|-...+|+...    .+..+++|..........-...+|.++++.+....+ ++++....    .++|+||++|..+
T Consensus         4 ~~~G~tn~~y~~~~----~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~   75 (256)
T TIGR02721         4 LSGGLTNRSWRIEH----PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVI   75 (256)
T ss_pred             CCCcCcCCeEEEEe----CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCccc
Confidence            45677788997753    344677887644322211134678888887753323 44554432    3689999998765


Q ss_pred             hHh--------------h---hcc---CCCCCHHHH-HHHHHHH---------HHHHHHhhhc-----cCCceEecCCCC
Q 047157          575 SNF--------------L---FHE---GQRPGWVQR-VEIALGV---------ARGLLYLHEE-----CETQIIHCDIKP  619 (788)
Q Consensus       575 ~~~--------------l---~~~---~~~~~~~~~-~~i~~qi---------~~aL~~LH~~-----~~~~ivH~dlkp  619 (788)
                      ...              +   +..   ...++.... ..+..++         ...+..+...     ....++|+|+.|
T Consensus        76 ~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~  155 (256)
T TIGR02721        76 TLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHA  155 (256)
T ss_pred             ccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCc
Confidence            421              1   111   111121111 1111111         1111112111     123689999999


Q ss_pred             CcEEeccCCCCCCCcEEEeecCCccc
Q 047157          620 QNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       620 ~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      .||+++     +++ +.|+||..+..
T Consensus       156 ~Nil~~-----~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       156 YNLVVT-----PQG-LKLIDWEYASD  175 (256)
T ss_pred             CcEEEe-----CCC-CEEEeccccCc
Confidence            999997     444 78999988764

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=96.42  E-value=0.013  Score=62.39  Aligned_cols=76  Identities=20%  Similarity=0.285  Sum_probs=45.3

Q ss_pred             cccccccceEEEEEEec----cCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccc-cceEeeEEecCCeEEEEEecC
Q 047157          495 LVGTGSSGKVYRGILRL----KDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKN-LVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       495 ~lg~G~~g~Vy~~~~~~----~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpn-iv~~~~~~~~~~~~~lV~e~~  569 (788)
                      .|..|-...+|+.....    +..+..+++|...... .......+|.+++..+.... ..++++++..    .+|+||+
T Consensus         5 ~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~i   79 (302)
T cd05156           5 KISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEFI   79 (302)
T ss_pred             EecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhee
Confidence            45556667888876531    0124578888865432 22234567877777774322 3456665542    3589998


Q ss_pred             CCCCHh
Q 047157          570 PNGTLS  575 (788)
Q Consensus       570 ~~gsL~  575 (788)
                      +|..+.
T Consensus        80 ~G~~l~   85 (302)
T cd05156          80 PSRTLT   85 (302)
T ss_pred             CCCcCC
Confidence            887664

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=96.32  E-value=0.022  Score=60.39  Aligned_cols=140  Identities=18%  Similarity=0.231  Sum_probs=80.6

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCcc--ccceEeeE------EecCCeEEEE
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHK--NLVRLLGF------CSEEDKRLLV  565 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hp--niv~~~~~------~~~~~~~~lV  565 (788)
                      +.|..|....+|+....   ++ .+++|.....   ....+..|++++..+.+.  .+++++..      ....+..++|
T Consensus        20 ~~i~~G~~n~~y~v~~~---~~-~~vLr~~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l   92 (296)
T cd05153          20 EGISAGIENTNYFVTTD---SG-RYVLTLFEKV---SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAAL   92 (296)
T ss_pred             ecccCccccceEEEEeC---CC-cEEEEEcCCC---ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEE
Confidence            45777877899987542   33 6788877642   234566777777776432  24444432      2334567899


Q ss_pred             EecCCCCCHhH----h-------h---hcc--C--------CCCCHHHHH----------HHHHHHHHHHHHhhh----c
Q 047157          566 YELMPNGTLSN----F-------L---FHE--G--------QRPGWVQRV----------EIALGVARGLLYLHE----E  607 (788)
Q Consensus       566 ~e~~~~gsL~~----~-------l---~~~--~--------~~~~~~~~~----------~i~~qi~~aL~~LH~----~  607 (788)
                      +++++|..+..    .       +   +..  +        ....|....          .....+..++.++..    .
T Consensus        93 ~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~  172 (296)
T cd05153          93 VEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSD  172 (296)
T ss_pred             EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhc
Confidence            99999876532    0       1   100  0        001111110          011123334444443    1


Q ss_pred             cCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       608 ~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ...+++|+|+.|.||+++     ++..+.|+||+.+..
T Consensus       173 ~~~~l~HgD~~~~Nil~~-----~~~~~~iIDfe~a~~  205 (296)
T cd05153         173 LPRGVIHADLFRDNVLFD-----GDELSGVIDFYFACT  205 (296)
T ss_pred             CCCcCCccCcCcccEEEe-----CCceEEEeehhhhcC
Confidence            234799999999999998     555568999987753

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PRK05231 homoserine kinase; Provisional

Probab=96.11  E-value=0.077  Score=56.96  Aligned_cols=32  Identities=25%  Similarity=0.390  Sum_probs=26.2

Q ss_pred             CCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       609 ~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ..+++|+|++|.||+++     .+...-|+||+.+..
T Consensus       186 p~~liHgD~~~~Nil~~-----~~~~~~iIDf~~~~~  217 (319)
T PRK05231        186 PRGVIHADLFRDNVLFE-----GDRLSGFIDFYFACN  217 (319)
T ss_pred             CcccCCCCCCCCcEEEE-----CCceEEEEecccccC
Confidence            45899999999999997     444558999998753

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=96.10  E-value=0.033  Score=59.54  Aligned_cols=140  Identities=19%  Similarity=0.273  Sum_probs=76.9

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCcc--ccceEeeE------EecCCeEEEE
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHK--NLVRLLGF------CSEEDKRLLV  565 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hp--niv~~~~~------~~~~~~~~lV  565 (788)
                      +.++.|....+|+...   +++ .+++|.......  .+.+..|.+++..|...  .+++++..      ....+..+++
T Consensus        28 ~~~~~G~~n~~y~v~t---~~~-~~vLK~~~~~~~--~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l  101 (307)
T TIGR00938        28 KGIAEGVENSNYLLTT---DVG-RYILTLYEKRVK--AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACL  101 (307)
T ss_pred             cccCCccccceEEEEe---CCC-cEEEEEecCCCC--HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEE
Confidence            4567777789998754   233 566776644211  23344566666555321  23444432      1224567899


Q ss_pred             EecCCCCCHh-----------Hhh---hccCC-----------CCCHHHHH------------HHHHHHHHHHHHhhh--
Q 047157          566 YELMPNGTLS-----------NFL---FHEGQ-----------RPGWVQRV------------EIALGVARGLLYLHE--  606 (788)
Q Consensus       566 ~e~~~~gsL~-----------~~l---~~~~~-----------~~~~~~~~------------~i~~qi~~aL~~LH~--  606 (788)
                      +||++|..+.           ..+   +....           ...|....            .....+.+.++++..  
T Consensus       102 ~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~  181 (307)
T TIGR00938       102 VEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFW  181 (307)
T ss_pred             EEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhh
Confidence            9999885532           111   11000           01111110            011123334555532  


Q ss_pred             --ccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          607 --ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       607 --~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                        ....+++|+|+++.||+++     ++....|+||+.+.
T Consensus       182 ~~~~~~~l~HgD~~~~Nvl~~-----~~~~~~vIDfd~~~  216 (307)
T TIGR00938       182 PRDLPRGVIHADLFPDNVLFD-----GDSVKGVIDFYFAC  216 (307)
T ss_pred             hhcCCCccCCCCCCcCcEEEE-----CCceEEEeeccccc
Confidence              2345899999999999998     55566899999875

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PLN02236 choline kinase

Probab=95.98  E-value=0.042  Score=59.56  Aligned_cols=142  Identities=16%  Similarity=0.169  Sum_probs=79.0

Q ss_pred             cccccccceEEEEEEecc--CcceeeeeeecccchHHHHHHHHHHHHHhcCCCcccc-ceEeeEEecCCeEEEEEecCCC
Q 047157          495 LVGTGSSGKVYRGILRLK--DTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNL-VRLLGFCSEEDKRLLVYELMPN  571 (788)
Q Consensus       495 ~lg~G~~g~Vy~~~~~~~--~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpni-v~~~~~~~~~~~~~lV~e~~~~  571 (788)
                      .|..|-.-.+|+......  ..+..+++|.......... .-.+|..+++.+..-++ .++++.+..+    .|+||+++
T Consensus        43 ~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~i-dR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~g  117 (344)
T PLN02236         43 PLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFF-DRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIHA  117 (344)
T ss_pred             EcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeee-chHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeCC
Confidence            344577778898765321  1235788887755432222 22578888887754333 4566665432    57999887


Q ss_pred             CCHhHh-----------------hhccC----CCC-CHHHHHHHHHH-----------------HHHHHHHhh----h-c
Q 047157          572 GTLSNF-----------------LFHEG----QRP-GWVQRVEIALG-----------------VARGLLYLH----E-E  607 (788)
Q Consensus       572 gsL~~~-----------------l~~~~----~~~-~~~~~~~i~~q-----------------i~~aL~~LH----~-~  607 (788)
                      .+|...                 +++..    ... .+..+..+..+                 +...+..|.    . .
T Consensus       118 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~  197 (344)
T PLN02236        118 RTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDD  197 (344)
T ss_pred             CCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccC
Confidence            666421                 01111    001 12222222211                 111122221    1 1


Q ss_pred             cCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       608 ~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ....++|+|+++.||+++.    .+..+.|+||..+..
T Consensus       198 ~~~~~cH~Dl~~~Nil~~~----~~~~~~lID~Eya~~  231 (344)
T PLN02236        198 QEIGFCHNDLQYGNIMIDE----ETRAITIIDYEYASY  231 (344)
T ss_pred             CCceEEeCCCCcCcEEEeC----CCCcEEEEeehhccc
Confidence            2347899999999999972    246799999988864

>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins

Probab=95.92  E-value=0.0065  Score=49.42  Aligned_cols=34  Identities=18%  Similarity=0.203  Sum_probs=28.8

Q ss_pred             ccCCHHHHHHHhhccccccccccc--CCceeecccc
Q 047157          357 SNVDVEGCRKAVMDDCYSLGASLV--GSTCVKTRMP  390 (788)
Q Consensus       357 ~~~s~~~C~~~Cl~nCsC~a~~~~--~~~C~~w~~~  390 (788)
                      ...+.++|+..|+.||.|.|+.|.  .+.|+++...
T Consensus        23 ~~~s~~~Cq~~C~~~~~C~afT~~~~~~~C~lk~~~   58 (73)
T cd01100          23 FASSAEQCQAACTADPGCLAFTYNTKSKKCFLKSSE   58 (73)
T ss_pred             ecCCHHHHHHHcCCCCCceEEEEECCCCeEEcccCC
Confidence            356899999999999999999985  4789888763

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=95.80  E-value=0.0091  Score=61.75  Aligned_cols=135  Identities=12%  Similarity=0.106  Sum_probs=87.7

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccc--h-------H-------------HHHHHHHHHHHHhcCCC-c
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--I-------E-------------KTNEEFMTELKIIGRTH-H  546 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~-------~-------------~~~~~~~~E~~~l~~l~-h  546 (788)
                      +.+.++||-|.=+.||.+..   ..+.+.++|.=+-.  +       .             -.+-...+|...|+.|. |
T Consensus        94 ~svGnqIGVGKESDIY~v~d---~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~  170 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVAD---EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYER  170 (465)
T ss_pred             hhhccccccccccceEEEec---CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHc
Confidence            34568999999999999977   45667777742110  0       0             01123457788887774 2


Q ss_pred             -cccceEeeEEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEec
Q 047157          547 -KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLD  625 (788)
Q Consensus       547 -pniv~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  625 (788)
                       --+++.++    .+..++|||++.+-.|...-+    ..+..++.   ..+..-+.-|-.+   |+||+|..--||+++
T Consensus       171 gfpVPkpiD----~~RH~Vvmelv~g~Pl~~v~~----v~d~~~ly---~~lm~~Iv~la~~---GlIHgDFNEFNimv~  236 (465)
T KOG2268|consen  171 GFPVPKPID----HNRHCVVMELVDGYPLRQVRH----VEDPPTLY---DDLMGLIVRLANH---GLIHGDFNEFNIMVK  236 (465)
T ss_pred             CCCCCCccc----ccceeeHHHhhcccceeeeee----cCChHHHH---HHHHHHHHHHHHc---CceecccchheeEEe
Confidence             22444444    346689999998888765431    22233332   3333334445555   999999999999998


Q ss_pred             cCCCCCCCcEEEeecCCcccc
Q 047157          626 LKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       626 ~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                           ++..++++||=.....
T Consensus       237 -----dd~~i~vIDFPQmvS~  252 (465)
T KOG2268|consen  237 -----DDDKIVVIDFPQMVST  252 (465)
T ss_pred             -----cCCCEEEeechHhhcc
Confidence                 7889999999765544

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=95.51  E-value=0.0031  Score=76.70  Aligned_cols=159  Identities=12%  Similarity=-0.024  Sum_probs=112.2

Q ss_pred             HHHHHHHHhcCCCccccceEeeEEe--cCCeEEEEEecCCCCCHhHhhhccCCC---CCHHHHHHHHHHHHHHHHHhhhc
Q 047157          533 EFMTELKIIGRTHHKNLVRLLGFCS--EEDKRLLVYELMPNGTLSNFLFHEGQR---PGWVQRVEIALGVARGLLYLHEE  607 (788)
Q Consensus       533 ~~~~E~~~l~~l~hpniv~~~~~~~--~~~~~~lV~e~~~~gsL~~~l~~~~~~---~~~~~~~~i~~qi~~aL~~LH~~  607 (788)
                      ....|...++...|+++.....-..  +..+.+.+++|+..|.+.+.+.+....   ++..-+.....+...+..-+|..
T Consensus      1275 mll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~ 1354 (2724)
T KOG1826|consen 1275 MLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSL 1354 (2724)
T ss_pred             hhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhc
Confidence            3344444555568988877655443  234668899999999999998654322   22222333333335555555554


Q ss_pred             cC--CceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHH
Q 047157          608 CE--TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGV  685 (788)
Q Consensus       608 ~~--~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGv  685 (788)
                      .+  .-.+|++||+-|.+|.     .+.++|++++|+.+...+. ........+++.|+.|++...-+++.++|+|..|+
T Consensus      1355 tnlg~T~v~~~Lkf~lpmIV-----tny~v~~gk~gLdKIknp~-~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~ 1428 (2724)
T KOG1826|consen 1355 TNLGNTNVSKSLKFTLPMIV-----TNYNVKLGKGGLDKIKNPV-LSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSL 1428 (2724)
T ss_pred             ccCCccchhhhhhhhcccee-----cCCcccccccccccccCch-HhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence            22  2368999999999998     8889999999999943332 22233456788899999999889999999999999


Q ss_pred             HHHHHHhCCCCC
Q 047157          686 MLLEIICGRRHI  697 (788)
Q Consensus       686 il~elltg~~p~  697 (788)
                      .+|+..-|..+|
T Consensus      1429 ~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1429 SLYLRSDGNAYF 1440 (2724)
T ss_pred             HHHHHhcccHHH
Confidence            999998887766

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=95.47  E-value=0.099  Score=54.77  Aligned_cols=31  Identities=26%  Similarity=0.546  Sum_probs=24.9

Q ss_pred             CceEecCCCCCcEEeccCCCCCCCc-EEEeecCCccc
Q 047157          610 TQIIHCDIKPQNVLLDLKTLDTNYM-AKISDFGISKL  645 (788)
Q Consensus       610 ~~ivH~dlkp~NIll~~~~~~~~~~-~kL~Dfg~a~~  645 (788)
                      ..++|+|++|.||+++     +++. .-|+||+.+..
T Consensus       185 ~~lvHGD~~~~Nilv~-----~~~~~~gviDWe~a~i  216 (276)
T cd05152         185 TVLVHGDLHPGHILID-----EDARVTGLIDWTEAKV  216 (276)
T ss_pred             CeeEeCCCCCCcEEEe-----CCCCEEEEECcHhccc
Confidence            3589999999999997     4333 56999998864

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=95.41  E-value=0.12  Score=54.39  Aligned_cols=72  Identities=17%  Similarity=0.204  Sum_probs=44.5

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC---CccccceEeeEEecCCeEEEEEecCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT---HHKNLVRLLGFCSEEDKRLLVYELMP  570 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l---~hpniv~~~~~~~~~~~~~lV~e~~~  570 (788)
                      +.++.|.-..+|+..    ..+..+.||.-...   ....|..|.+-|+.|   .--.+++++++....+..+||+||++
T Consensus        23 ~~v~GG~i~~a~~~~----~~~~~~FvK~~~~~---~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~   95 (288)
T PF03881_consen   23 EPVSGGDINEAYRLD----TDGGSYFVKVNSES---GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLE   95 (288)
T ss_dssp             EEE--SSSSEEEEEE----TTS-EEEEEEEEGG---GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE---
T ss_pred             EecCCCChhheEEEE----CCCccEEEEecChh---hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeec
Confidence            567888889999764    45558889987632   234566777777666   34568889998887778899999987


Q ss_pred             CC
Q 047157          571 NG  572 (788)
Q Consensus       571 ~g  572 (788)
                      .+
T Consensus        96 ~~   97 (288)
T PF03881_consen   96 MG   97 (288)
T ss_dssp             --
T ss_pred             CC
Confidence            66

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=95.27  E-value=0.14  Score=54.20  Aligned_cols=122  Identities=20%  Similarity=0.260  Sum_probs=73.2

Q ss_pred             ceeeeeeecc-cchHHHHHHHHHHHHHhcCCCc--cccceEeeEEecCC--eEEEEEecCCCCCHhHhhhccCCCCCHHH
Q 047157          515 QIEIAVKKLE-KDIEKTNEEFMTELKIIGRTHH--KNLVRLLGFCSEED--KRLLVYELMPNGTLSNFLFHEGQRPGWVQ  589 (788)
Q Consensus       515 ~~~vavK~l~-~~~~~~~~~~~~E~~~l~~l~h--pniv~~~~~~~~~~--~~~lV~e~~~~gsL~~~l~~~~~~~~~~~  589 (788)
                      +++.++.+-. ...........+|.++++.+.-  .-..+.++.|.++.  ..+.||+|++|..+.+.+...    ... 
T Consensus        48 ~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~----~~~-  122 (321)
T COG3173          48 GQKYVLRKPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPE----SLG-  122 (321)
T ss_pred             CceEEEecCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCCcc----cch-
Confidence            4456666221 1223344556678888877643  33456677777766  679999999885433322111    000 


Q ss_pred             HHHHH-HHHHHHHHHhhh--------------------------------------------------c-----cCCceE
Q 047157          590 RVEIA-LGVARGLLYLHE--------------------------------------------------E-----CETQII  613 (788)
Q Consensus       590 ~~~i~-~qi~~aL~~LH~--------------------------------------------------~-----~~~~iv  613 (788)
                       .+++ ..+++.|+-||+                                                  +     ..+.++
T Consensus       123 -~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~~~~lv  201 (321)
T COG3173         123 -RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAGPPVLV  201 (321)
T ss_pred             -HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCCCceee
Confidence             1111 244444444443                                                  2     124799


Q ss_pred             ecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       614 H~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+|+++.||+++     +...+-+.||+++..-.
T Consensus       202 HGD~~~gNlii~-----~~~~~gVlDwe~~~lGD  230 (321)
T COG3173         202 HGDYRPGNLIID-----PGRPTGVLDWELATLGD  230 (321)
T ss_pred             eCCcccCCEEEe-----CCCeeEEEeccccccCC
Confidence            999999999998     44458899999987643

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=95.11  E-value=0.047  Score=60.00  Aligned_cols=49  Identities=18%  Similarity=0.337  Sum_probs=37.6

Q ss_pred             HHHHHHHHHhcCCCccccceEeeEEecCC-eEEEEEecCCCCCHhHhhhcc
Q 047157          532 EEFMTELKIIGRTHHKNLVRLLGFCSEED-KRLLVYELMPNGTLSNFLFHE  581 (788)
Q Consensus       532 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~lV~e~~~~gsL~~~l~~~  581 (788)
                      .++.-....++.+.|+|+...+++..... ...+|+|++ +.||++.+...
T Consensus        27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~   76 (725)
T KOG1093|consen   27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTG   76 (725)
T ss_pred             HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhc
Confidence            34556677888889999999999876543 467889998 77999888544

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=94.79  E-value=0.1  Score=55.25  Aligned_cols=141  Identities=18%  Similarity=0.180  Sum_probs=89.6

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch-------------------------HHHHH-HHHHHHHHhcCCCcc
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-------------------------EKTNE-EFMTELKIIGRTHHK  547 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-------------------------~~~~~-~~~~E~~~l~~l~hp  547 (788)
                      ..|..|.=+-||.+.-   ..+..+|||+++...                         ....+ -..+|++-|.+|+.-
T Consensus       150 GCiSTGKEANVYHat~---~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a  226 (520)
T KOG2270|consen  150 GCISTGKEANVYHATE---EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA  226 (520)
T ss_pred             cccccCccceeEeeec---CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            4578899999999876   355679999874211                         11111 134677777777544


Q ss_pred             ccceEeeEEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccC
Q 047157          548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLK  627 (788)
Q Consensus       548 niv~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~  627 (788)
                      .|.----+.  -....|||+|+....- -.=.-+...++...+..+-.|++.-+.-|-+.|  ++||.||.--|+|+   
T Consensus       227 GIP~PePIl--Lk~hVLVM~FlGrdgw-~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Ly---  298 (520)
T KOG2270|consen  227 GIPCPEPIL--LKNHVLVMEFLGRDGW-AAPKLKDASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLY---  298 (520)
T ss_pred             CCCCCCcee--eecceEeeeeccCCCC-cCcccccccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheE---
Confidence            332111000  0134689999853211 110011234555567777788888888887765  89999999999999   


Q ss_pred             CCCCCCcEEEeecCCccccCC
Q 047157          628 TLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       628 ~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                         .++.+.|+|-+.+.....
T Consensus       299 ---hdG~lyiIDVSQSVE~DH  316 (520)
T KOG2270|consen  299 ---HDGKLYIIDVSQSVEHDH  316 (520)
T ss_pred             ---ECCEEEEEEccccccCCC
Confidence               578999999988776543

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=94.66  E-value=0.16  Score=54.47  Aligned_cols=80  Identities=18%  Similarity=0.128  Sum_probs=49.0

Q ss_pred             cccccccceEEEEEEeccCcceeeeeeecccch-------HHHHHHHHHHHHHhcCCC--cc-ccceEeeEEecCCeEEE
Q 047157          495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-------EKTNEEFMTELKIIGRTH--HK-NLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       495 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-------~~~~~~~~~E~~~l~~l~--hp-niv~~~~~~~~~~~~~l  564 (788)
                      .||-|....||++...  +.+..|+||.-....       +-..++..-|.+.|+...  -| .+++++.+  +.+...+
T Consensus         2 EigdGnlN~VfrV~~~--~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~   77 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQ--EGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVT   77 (370)
T ss_pred             cCCCCceEEEEEEEcC--CCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--cccccee
Confidence            5799999999999863  333578898653211       222345556777776543  23 45566543  5556679


Q ss_pred             EEecCCCC-CHhHhh
Q 047157          565 VYELMPNG-TLSNFL  578 (788)
Q Consensus       565 V~e~~~~g-sL~~~l  578 (788)
                      |||+++.. .|++.|
T Consensus        78 vMEdL~~~~ilR~~L   92 (370)
T TIGR01767        78 VMEDLSHHKIARKGL   92 (370)
T ss_pred             hHhhCccchHHHHHH
Confidence            99998543 343444

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=94.45  E-value=0.075  Score=53.25  Aligned_cols=30  Identities=27%  Similarity=0.492  Sum_probs=20.8

Q ss_pred             ceEecCCCCCcEEe-ccCCCCCCCcEEEeecCCccc
Q 047157          611 QIIHCDIKPQNVLL-DLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       611 ~ivH~dlkp~NIll-~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      .++|+|+.+.|||+ +     .++.++|+||..+..
T Consensus       144 v~cHnDl~~~Nil~~~-----~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  144 VFCHNDLNPGNILINN-----KDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEE-S--SGGGEEETS-----SSSCEEE--GTT-EE
T ss_pred             eEeeccCccccEEecc-----CCCeEEEecHHHHhh
Confidence            68999999999999 4     778999999998764

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=94.40  E-value=0.22  Score=53.71  Aligned_cols=76  Identities=13%  Similarity=0.258  Sum_probs=43.9

Q ss_pred             ccccccccceEEEEEEeccC-cceeeeeeecccchHHHHHHHHHHHHHhcCCCcccc-ceEeeEEecCCeEEEEEecCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNL-VRLLGFCSEEDKRLLVYELMPN  571 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpni-v~~~~~~~~~~~~~lV~e~~~~  571 (788)
                      +.|..|-.-.+|+....... ....|.+|........ .-.-.+|..+++.+..-++ +++++++..+    +|.+|+++
T Consensus        20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~-~IdR~~E~~il~~l~~~gl~P~~l~~~~~G----~i~~fi~g   94 (330)
T PLN02421         20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDY-VIDRERELQAIKYLSAAGFGAKLLGVFGNG----MIQSFINA   94 (330)
T ss_pred             EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCe-EechHHHHHHHHHHHhcCCCCceeEEeCCc----EeehhhcC
Confidence            34444666778887654211 1236778876543221 1223578888887754444 4666665322    58999877


Q ss_pred             CCH
Q 047157          572 GTL  574 (788)
Q Consensus       572 gsL  574 (788)
                      ..|
T Consensus        95 ~~l   97 (330)
T PLN02421         95 RTL   97 (330)
T ss_pred             CCC
Confidence            665

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	788
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		2e-49
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		3e-48
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		3e-34
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		2e-33
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		4e-33
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		7e-33
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		3e-32
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		5e-31
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-23
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		3e-23
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		4e-23
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		4e-23
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		4e-23
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		5e-23
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		6e-23
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-23
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		9e-23
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		9e-23
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		1e-22
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		1e-22
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-22
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		3e-22
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		6e-22
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		1e-21
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		1e-21
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		1e-21
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		1e-21
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		2e-21
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		5e-21
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		4e-20
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		9e-20
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		1e-19
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		2e-19
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		2e-19
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		3e-19
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		3e-19
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		3e-19
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		3e-19
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-19
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		4e-19
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		4e-19
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		5e-19
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		5e-19
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		5e-19
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		5e-19
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		5e-19
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		6e-19
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		6e-19
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		6e-19
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		6e-19
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		6e-19
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		6e-19
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		7e-19
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		7e-19
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		7e-19
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		7e-19
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		8e-19
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		8e-19
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		8e-19
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		8e-19
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		8e-19
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		8e-19
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		1e-18
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		1e-18
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-18
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		1e-18
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		1e-18
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		1e-18
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-18
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		1e-18
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-18
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-18
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		2e-18
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		2e-18
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		2e-18
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-18
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		2e-18
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		2e-18
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		2e-18
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		2e-18
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		2e-18
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		3e-18
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		3e-18
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		3e-18
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		3e-18
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		3e-18
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		3e-18
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-18
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		2e-17
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		2e-17
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		3e-17
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		3e-17
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		3e-17
1fvr_A	327	Tie2 Kinase Domain Length = 327		3e-17
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		3e-17
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		4e-17
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		4e-17
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		4e-17
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		4e-17
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		4e-17
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		4e-17
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		5e-17
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		8e-17
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		8e-17
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		1e-16
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		2e-16
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		3e-16
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		5e-16
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		9e-16
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		1e-15
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		1e-15
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		1e-15
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		1e-15
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		1e-15
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		1e-15
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-15
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		1e-15
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-15
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-15
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-15
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		2e-15
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		2e-15
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		2e-15
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		2e-15
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		2e-15
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		2e-15
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		2e-15
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		2e-15
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		2e-15
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-15
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-15
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-15
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		2e-15
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		2e-15
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		2e-15
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		3e-15
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-15
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		3e-15
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		5e-15
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		5e-15
3a4o_X	286	Lyn Kinase Domain Length = 286		5e-15
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		6e-15
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		6e-15
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		6e-15
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		6e-15
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		6e-15
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		6e-15
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		7e-15
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		7e-15
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		7e-15
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		8e-15
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		8e-15
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		8e-15
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		8e-15
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		8e-15
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		8e-15
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		8e-15
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		8e-15
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		9e-15
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		1e-14
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		1e-14
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		2e-14
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		2e-14
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-14
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-14
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		2e-14
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		3e-14
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		3e-14
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		3e-14
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		3e-14
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-14
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		3e-14
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		3e-14
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		3e-14
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-14
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		3e-14
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		3e-14
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		3e-14
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		3e-14
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		3e-14
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		3e-14
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		3e-14
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		3e-14
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		3e-14
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		3e-14
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		3e-14
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		3e-14
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		3e-14
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		3e-14
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		3e-14
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		3e-14
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		3e-14
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		3e-14
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-14
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		3e-14
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		3e-14
4fl2_A	636	Structural And Biophysical Characterization Of The		3e-14
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		4e-14
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		4e-14
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		4e-14
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		4e-14
4fl3_A	635	Structural And Biophysical Characterization Of The		4e-14
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		4e-14
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		4e-14
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		4e-14
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		4e-14
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		4e-14
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		4e-14
2pl0_A	289	Lck Bound To Imatinib Length = 289		4e-14
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		4e-14
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		5e-14
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		5e-14
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		5e-14
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		5e-14
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		5e-14
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-14
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		6e-14
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		6e-14
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		6e-14
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		6e-14
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		6e-14
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		6e-14
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		6e-14
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		6e-14
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		6e-14
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		7e-14
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		7e-14
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		8e-14
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		8e-14
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		8e-14
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		8e-14
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		8e-14
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		8e-14
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		8e-14
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		8e-14
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		8e-14
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		9e-14
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-14
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-14
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		1e-13
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		1e-13
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		1e-13
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		1e-13
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		1e-13
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		1e-13
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		1e-13
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		1e-13
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-13
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		1e-13
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		1e-13
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		1e-13
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		1e-13
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-13
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		2e-13
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		2e-13
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		2e-13
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-13
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		2e-13
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		2e-13
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-13
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		2e-13
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-13
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		2e-13
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		2e-13
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		2e-13
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		2e-13
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		2e-13
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		2e-13
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		2e-13
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		2e-13
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		2e-13
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		2e-13
3b2t_A	311	Structure Of Phosphotransferase Length = 311		2e-13
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		2e-13
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		2e-13
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		2e-13
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		2e-13
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-13
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		2e-13
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-13
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		2e-13
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		2e-13
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		2e-13
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-13
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		3e-13
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		3e-13
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-13
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		3e-13
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-13
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		3e-13
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		3e-13
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		4e-13
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		4e-13
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		4e-13
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		4e-13
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		4e-13
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		4e-13
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		4e-13
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		5e-13
4fie_A	423	Full-Length Human Pak4 Length = 423		5e-13
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		5e-13
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		5e-13
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		5e-13
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		6e-13
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		6e-13
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		6e-13
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		6e-13
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		7e-13
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		7e-13
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		7e-13
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		7e-13
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		8e-13
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-13
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		8e-13
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		9e-13
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		9e-13
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		9e-13
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		9e-13
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-12
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		1e-12
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		1e-12
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		1e-12
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		1e-12
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		1e-12
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		1e-12
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		1e-12
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		1e-12
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		1e-12
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		1e-12
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		1e-12
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		1e-12
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-12
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		1e-12
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-12
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		2e-12
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-12
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		2e-12
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-12
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-12
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		2e-12
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-12
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		2e-12
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		2e-12
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		2e-12
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		2e-12
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		3e-12
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		3e-12
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		3e-12
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		3e-12
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		3e-12
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		3e-12
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		3e-12
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		4e-12
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		4e-12
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		5e-12
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		5e-12
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		6e-12
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		6e-12
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		7e-12
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		7e-12
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		7e-12
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		8e-12
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		8e-12
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		8e-12
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		8e-12
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		8e-12
4h58_A	275	Braf In Complex With Compound 3 Length = 275		8e-12
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		9e-12
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		9e-12
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		9e-12
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		9e-12
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		9e-12
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		1e-11
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		1e-11
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		1e-11
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		1e-11
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		1e-11
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		1e-11
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		1e-11
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		1e-11
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		1e-11
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		1e-11
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		1e-11
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		1e-11
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		1e-11
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		1e-11
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		1e-11
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		1e-11
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		1e-11
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		1e-11
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-11
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-11
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		2e-11
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		2e-11
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-11
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		2e-11
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		2e-11
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		2e-11
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		2e-11
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-11
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		2e-11
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		2e-11
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		2e-11
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-11
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		3e-11
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		3e-11
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		3e-11
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		3e-11
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		3e-11
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		3e-11
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		3e-11
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		3e-11
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		3e-11
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		3e-11
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		3e-11
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		4e-11
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		4e-11
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		4e-11
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		4e-11
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		4e-11
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		4e-11
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		4e-11
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		4e-11
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		4e-11
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		4e-11
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		4e-11
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		4e-11
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		5e-11
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		5e-11
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		5e-11
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		5e-11
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		5e-11
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		6e-11
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		6e-11
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		6e-11
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		6e-11
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		6e-11
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		6e-11
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		6e-11
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		6e-11
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		6e-11
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		6e-11
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		6e-11
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		7e-11
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		7e-11
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		7e-11
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		7e-11
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		7e-11
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		7e-11
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		7e-11
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		7e-11
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		7e-11
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		8e-11
3kk8_A	284	Camkii Substrate Complex A Length = 284		8e-11
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		8e-11
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		8e-11
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		8e-11
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		8e-11
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		8e-11
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		8e-11
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		8e-11
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		8e-11
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		8e-11
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		8e-11
3kk9_A	282	Camkii Substrate Complex B Length = 282		8e-11
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		8e-11
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		8e-11
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		8e-11
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		9e-11
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		9e-11
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		9e-11
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		9e-11
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		9e-11
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		9e-11
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		9e-11
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		9e-11
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		9e-11
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		9e-11
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		9e-11
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		9e-11
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		9e-11
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		9e-11
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		9e-11
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		9e-11
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		9e-11
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		9e-11
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		9e-11
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		9e-11
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-10
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-10
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		1e-10
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		1e-10
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		1e-10
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		1e-10
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		1e-10
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		1e-10
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		1e-10
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		1e-10
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-10
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		1e-10
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		1e-10
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		1e-10
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-10
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-10
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		1e-10
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		1e-10
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		1e-10
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		1e-10
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-10
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		1e-10
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		1e-10
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		1e-10
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		1e-10
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		1e-10
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		1e-10
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		1e-10
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		1e-10
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		1e-10
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		1e-10
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		1e-10
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		1e-10
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		1e-10
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		1e-10
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-10
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		1e-10
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		1e-10
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		1e-10
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		1e-10
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		1e-10
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		1e-10
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		1e-10
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		1e-10
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		1e-10
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		1e-10
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		1e-10
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		1e-10
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		2e-10
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-10
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		2e-10
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		2e-10
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		2e-10
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		2e-10
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		2e-10
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		2e-10
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		2e-10
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		2e-10
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-10
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		2e-10
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-10
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-10
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		2e-10
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-10
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		3e-10
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		3e-10
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		3e-10
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		3e-10
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		3e-10
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		3e-10
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		3e-10
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-10
3soa_A	444	Full-Length Human Camkii Length = 444		3e-10
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		3e-10
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		4e-10
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		4e-10
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		4e-10
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		4e-10
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		4e-10
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		4e-10
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		4e-10
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		4e-10
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		4e-10
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		4e-10
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		4e-10
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		4e-10
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		4e-10
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		4e-10
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		4e-10
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		4e-10
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		5e-10
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		5e-10
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-10
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		5e-10
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		5e-10
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		6e-10
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		6e-10
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		6e-10
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		6e-10
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		6e-10
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		6e-10
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		6e-10
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		6e-10
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		6e-10
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		6e-10
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		7e-10
3a7f_A	303	Human Mst3 Kinase Length = 303		7e-10
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		7e-10
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		7e-10
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		7e-10
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		7e-10
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		7e-10
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		7e-10
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		7e-10
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		7e-10
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		8e-10
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		8e-10
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		8e-10
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		8e-10
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		8e-10
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		8e-10
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		9e-10
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		9e-10
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		9e-10
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-10
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		9e-10
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		9e-10
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-10
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-10
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		9e-10
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		9e-10
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		9e-10
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		9e-10
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		1e-09
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		1e-09
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		1e-09
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		1e-09
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-09
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		1e-09
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		1e-09
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		1e-09
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-09
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-09
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		1e-09
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		1e-09
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		1e-09
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		1e-09
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		1e-09
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-09
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		1e-09
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		1e-09
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		1e-09
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		1e-09
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-09
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		2e-09
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		2e-09
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		2e-09
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		2e-09
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-09
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		2e-09
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		2e-09
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		2e-09
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		2e-09
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		2e-09
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-09
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		2e-09
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		2e-09
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		2e-09
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		2e-09
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-09
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		2e-09
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		2e-09
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		2e-09
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		3e-09
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		3e-09
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		3e-09
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		3e-09
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		4e-09
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		4e-09
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		4e-09
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		4e-09
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		5e-09
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		5e-09
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		5e-09
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		5e-09
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		6e-09
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		6e-09
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		6e-09
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		6e-09
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		6e-09
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		7e-09
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		7e-09
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		7e-09
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		7e-09
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		8e-09
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		8e-09
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		9e-09
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		9e-09
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		9e-09
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		9e-09
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		1e-08
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		1e-08
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-08
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		1e-08
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-08
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		2e-08
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		2e-08
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		2e-08
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		2e-08
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-08
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		2e-08
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-08
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		2e-08
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-08
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-08
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		2e-08
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		2e-08
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		3e-08
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		3e-08
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		3e-08
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		3e-08
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		3e-08
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		3e-08
3hec_A	348	P38 In Complex With Imatinib Length = 348		3e-08
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		3e-08
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		3e-08
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		3e-08
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		3e-08
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		3e-08
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		3e-08
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		3e-08
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		3e-08
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		3e-08
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		3e-08
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		3e-08
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		3e-08
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-08
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		4e-08
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		4e-08
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		4e-08
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		4e-08
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		4e-08
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		4e-08
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		4e-08
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		4e-08
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		4e-08
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		4e-08
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		4e-08
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		4e-08
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		4e-08
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		4e-08
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		4e-08
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		4e-08
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		4e-08
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		4e-08
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		4e-08
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		4e-08
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		4e-08
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		4e-08
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		4e-08
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		4e-08
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		4e-08
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		4e-08
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		4e-08
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		5e-08
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		5e-08
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-08
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		5e-08
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		5e-08
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		5e-08
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		6e-08
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		6e-08
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		6e-08
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		6e-08
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		6e-08
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		7e-08
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		7e-08
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		7e-08
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		7e-08
2oza_B	366	Structure Of P38alpha Complex Length = 366		7e-08
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		7e-08
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		7e-08
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		7e-08
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		8e-08
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		8e-08
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		8e-08
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		8e-08
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		8e-08
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		8e-08
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		8e-08
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		9e-08
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		9e-08
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		9e-08
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		9e-08
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		9e-08
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		9e-08
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		9e-08
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		9e-08
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		1e-07
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		1e-07
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-07
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		1e-07
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		1e-07
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		1e-07
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		1e-07
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-07
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		1e-07
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		1e-07
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-07
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		1e-07
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-07
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		1e-07
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		1e-07
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		1e-07
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		1e-07
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		1e-07
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		1e-07
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		1e-07
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-07
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		2e-07
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		2e-07
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		2e-07
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-07
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		2e-07
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		2e-07
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		2e-07
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		2e-07
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		2e-07
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		2e-07
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		2e-07
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		2e-07
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		2e-07
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		3e-07
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		3e-07
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		3e-07
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		3e-07
4ae6_A	343	Structure And Function Of The Human Sperm-specific		3e-07
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		3e-07
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		3e-07
4ae9_A	343	Structure And Function Of The Human Sperm-specific		3e-07
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		3e-07
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		3e-07
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		4e-07
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		4e-07
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		4e-07
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		4e-07
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		4e-07
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		4e-07
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		5e-07
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		5e-07
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		5e-07
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		5e-07
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		6e-07
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		6e-07
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		6e-07
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		7e-07
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		7e-07
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		7e-07
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		7e-07
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		9e-07
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		9e-07
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		1e-06
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		1e-06
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		1e-06
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		1e-06
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		1e-06
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		1e-06
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		1e-06
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		1e-06
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		1e-06
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		1e-06
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-06
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		1e-06
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		1e-06
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		1e-06
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		1e-06
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		2e-06
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		2e-06
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		2e-06
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-06
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		2e-06
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		2e-06
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		2e-06
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		2e-06
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		2e-06
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		2e-06
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		2e-06
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-06
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		2e-06
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		2e-06
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		2e-06
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		2e-06
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		2e-06
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		2e-06
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		2e-06
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		2e-06
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		2e-06
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-06
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		2e-06
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		2e-06
2oza_A	356	Structure Of P38alpha Complex Length = 356		2e-06
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		2e-06
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		3e-06
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		3e-06
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		3e-06
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		3e-06
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		3e-06
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		3e-06
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		3e-06
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		3e-06
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		3e-06
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		3e-06
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		3e-06
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		3e-06
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		4e-06
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		4e-06
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		4e-06
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		4e-06
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		4e-06
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		4e-06
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		5e-06
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		5e-06
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		5e-06
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		5e-06
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		6e-06
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		6e-06
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		6e-06
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		6e-06
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		7e-06
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		7e-06
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		7e-06
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		7e-06
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		7e-06
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		7e-06
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		7e-06
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		7e-06
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		7e-06
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		7e-06
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		8e-06
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		8e-06
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		8e-06
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		8e-06
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		8e-06
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		1e-05
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		1e-05
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		1e-05
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		1e-05
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		1e-05
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		1e-05
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		1e-05
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		1e-05
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		1e-05
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		1e-05
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		1e-05
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		2e-05
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-05
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		2e-05
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		2e-05
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		2e-05
1x8b_A	289	Structure Of Human Wee1a Kinase: Kinase Domain Comp		2e-05
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		2e-05
3bi6_A	287	Wee1 Kinase Complex With Inhibitor Pd352396 Length		2e-05
2in6_A	287	Wee1 Kinase Complex With Inhibitor Pd311839 Length		2e-05
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		2e-05
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-05
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		2e-05
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		2e-05
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-05
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-05
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		3e-05
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		3e-05
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		3e-05
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		4e-05
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		4e-05
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		4e-05
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		4e-05
2z2w_A	285	Humand Wee1 Kinase Complexed With Inhibitor Pf03357		5e-05
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		5e-05
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		5e-05
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		6e-05
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		6e-05
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		7e-05
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		7e-05
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		8e-05
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		9e-05
3kmu_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		9e-05
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		1e-04
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		1e-04
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		1e-04
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		1e-04
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		1e-04
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		1e-04
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		1e-04
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		1e-04
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		1e-04
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		1e-04
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		1e-04
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		1e-04
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		1e-04
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		2e-04
2pzi_A	681	Crystal Structure Of Protein Kinase Pkng From Mycob		2e-04
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		2e-04
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		2e-04
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-04
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		2e-04
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		2e-04
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		2e-04
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		2e-04
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		2e-04
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		2e-04
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		3e-04
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		3e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  193 bits (491), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/311 (37%), Positives = 172/311 (55%), Gaps = 17/311 (5%)
Query: 469 DPNSMEINFREFTFQELQEATKGFSK--LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD 526
           DP       + F+ +ELQ A+  FS   ++G G  GKVY+G  RL D  + +AVK+L+++
Sbjct: 17  DPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKG--RLADGTL-VAVKRLKEE 73
Query: 527 IEKTNE-EFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFH--EGQ 583
             +  E +F TE+++I    H+NL+RL GFC    +RLLVY  M NG++++ L    E Q
Sbjct: 74  RXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 133
Query: 584 RP-GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI 642
            P  W +R  IALG ARGL YLH+ C+ +IIH D+K  N+LLD       + A + DFG+
Sbjct: 134 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD-----EEFEAVVGDFGL 188
Query: 643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXX 702
           +KL++         +RGT+G++APE+L     + K DVF +GVMLLE+I G+R       
Sbjct: 189 AKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR---AFDL 245
Query: 703 XXXXXXXXXXXXXWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP 762
                        WV   +  + L+ LV  D +     E  E++  V L C    P  RP
Sbjct: 246 ARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERP 305
Query: 763 SMKKVIHMLEG 773
            M +V+ MLEG
Sbjct: 306 KMSEVVRMLEG 316

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  190 bits (482), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/311 (37%), Positives = 170/311 (54%), Gaps = 17/311 (5%)
Query: 469 DPNSMEINFREFTFQELQEATKGF--SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD 526
           DP       + F+ +ELQ A+  F    ++G G  GKVY+G  RL D  + +AVK+L+++
Sbjct: 9   DPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKG--RLADGXL-VAVKRLKEE 65
Query: 527 IEKTNE-EFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFH--EGQ 583
             +  E +F TE+++I    H+NL+RL GFC    +RLLVY  M NG++++ L    E Q
Sbjct: 66  RTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 125
Query: 584 RP-GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI 642
            P  W +R  IALG ARGL YLH+ C+ +IIH D+K  N+LLD       + A + DFG+
Sbjct: 126 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD-----EEFEAVVGDFGL 180
Query: 643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXX 702
           +KL++         +RG +G++APE+L     + K DVF +GVMLLE+I G+R       
Sbjct: 181 AKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR---AFDL 237
Query: 703 XXXXXXXXXXXXXWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP 762
                        WV   +  + L+ LV  D +     E  E++  V L C    P  RP
Sbjct: 238 ARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERP 297
Query: 763 SMKKVIHMLEG 773
            M +V+ MLEG
Sbjct: 298 KMSEVVRMLEG 308

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score =  144 bits (362), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/302 (34%), Positives = 154/302 (50%), Gaps = 26/302 (8%)
Query: 484 ELQEATKGFSK--LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKII 541
           +L+EAT  F    L+G G  GKVY+G+LR      ++A+K+   +  +  EEF TE++ +
Sbjct: 33  DLEEATNNFDHKFLIGHGVFGKVYKGVLR---DGAKVALKRRTPESSQGIEEFETEIETL 89
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEG---QRPGWVQRVEIALGVA 598
               H +LV L+GFC E ++ +L+Y+ M NG L   L+          W QR+EI +G A
Sbjct: 90  SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNM 657
           RGL YLH      IIH D+K  N+L     LD N++ KI+DFGISK   + DQT     +
Sbjct: 150 RGLHYLHTRA---IIHRDVKSINIL-----LDENFVPKITDFGISKKGTELDQTHLXXVV 201
Query: 658 RGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXXXXWV 717
           +GT+GY+ PE+     +T K DV+SFGV+L E++C R                     W 
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR-----SAIVQSLPREMVNLAEWA 256
Query: 718 ISCMLSRNLQVLVSHDPEVLSDL--ERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL 775
           +    +  L+ +V  DP +   +  E   +     + C       RPSM  V+  LE  L
Sbjct: 257 VESHNNGQLEQIV--DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314
Query: 776 EV 777
            +
Sbjct: 315 RL 316

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score =  140 bits (354), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/302 (34%), Positives = 153/302 (50%), Gaps = 26/302 (8%)
Query: 484 ELQEATKGFSK--LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKII 541
           +L+EAT  F    L+G G  GKVY+G+LR      ++A+K+   +  +  EEF TE++ +
Sbjct: 33  DLEEATNNFDHKFLIGHGVFGKVYKGVLR---DGAKVALKRRTPESSQGIEEFETEIETL 89
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEG---QRPGWVQRVEIALGVA 598
               H +LV L+GFC E ++ +L+Y+ M NG L   L+          W QR+EI +G A
Sbjct: 90  SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNM 657
           RGL YLH      IIH D+K  N+L     LD N++ KI+DFGISK   +  QT     +
Sbjct: 150 RGLHYLHTRA---IIHRDVKSINIL-----LDENFVPKITDFGISKKGTELGQTHLXXVV 201
Query: 658 RGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXXXXWV 717
           +GT+GY+ PE+     +T K DV+SFGV+L E++C R                     W 
Sbjct: 202 KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR-----SAIVQSLPREMVNLAEWA 256
Query: 718 ISCMLSRNLQVLVSHDPEVLSDL--ERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL 775
           +    +  L+ +V  DP +   +  E   +     + C       RPSM  V+  LE  L
Sbjct: 257 VESHNNGQLEQIV--DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314
Query: 776 EV 777
            +
Sbjct: 315 RL 316

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  139 bits (351), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 112/326 (34%), Positives = 154/326 (47%), Gaps = 52/326 (15%)
Query: 472 SMEIN---FREFTFQELQEATKGFSKL--------VGTGSSGKVYRGILRLKDTQIEIAV 520
           S+E++   F  F+F EL+  T  F +         +G G  G VY+G +        +AV
Sbjct: 4   SLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV----NNTTVAV 59
Query: 521 KKLEKDIEKTNEE----FMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSN 576
           KKL   ++ T EE    F  E+K++ +  H+NLV LLGF S+ D   LVY  MPNG+L +
Sbjct: 60  KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 577 FLF-HEGQRP-GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM 634
            L   +G  P  W  R +IA G A G+ +LH   E   IH DIK  N+L     LD  + 
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANIL-----LDEAFT 171
Query: 635 AKISDFGISKLLNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           AKISDFG+++   K  QT   + + GT  Y+APE LR   +T K D++SFGV+LLEII G
Sbjct: 172 AKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230
Query: 694 -------RRHXXXXXXXXXXXXXXXXXXXWVISCMLSRNLQVLVSHDPEVLSDLERFERM 746
                  R                     ++   M                +D    E M
Sbjct: 231 LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND--------------ADSTSVEAM 276
Query: 747 AMVGLWCNHPDPNLRPSMKKVIHMLE 772
             V   C H   N RP +KKV  +L+
Sbjct: 277 YSVASQCLHEKKNKRPDIKKVQQLLQ 302

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  139 bits (349), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 112/326 (34%), Positives = 153/326 (46%), Gaps = 52/326 (15%)
Query: 472 SMEIN---FREFTFQELQEATKGFSKL--------VGTGSSGKVYRGILRLKDTQIEIAV 520
           S+E++   F  F+F EL+  T  F +         +G G  G VY+G +        +AV
Sbjct: 4   SLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV----NNTTVAV 59
Query: 521 KKLEKDIEKTNEE----FMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSN 576
           KKL   ++ T EE    F  E+K++ +  H+NLV LLGF S+ D   LVY  MPNG+L +
Sbjct: 60  KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119
Query: 577 FLF-HEGQRP-GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM 634
            L   +G  P  W  R +IA G A G+ +LH   E   IH DIK  N+L     LD  + 
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANIL-----LDEAFT 171
Query: 635 AKISDFGISKLLNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           AKISDFG+++   K  QT     + GT  Y+APE LR   +T K D++SFGV+LLEII G
Sbjct: 172 AKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230
Query: 694 -------RRHXXXXXXXXXXXXXXXXXXXWVISCMLSRNLQVLVSHDPEVLSDLERFERM 746
                  R                     ++   M                +D    E M
Sbjct: 231 LPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND--------------ADSTSVEAM 276
Query: 747 AMVGLWCNHPDPNLRPSMKKVIHMLE 772
             V   C H   N RP +KKV  +L+
Sbjct: 277 YSVASQCLHEKKNKRPDIKKVQQLLQ 302

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/318 (34%), Positives = 147/318 (46%), Gaps = 49/318 (15%)
Query: 477 FREFTFQELQEATKGFSKL--------VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE 528
           F  F+F EL+  T  F +         +G G  G VY+G +        +AVKKL   ++
Sbjct: 6   FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV----NNTTVAVKKLAAMVD 61
Query: 529 KTNEE----FMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF-HEGQ 583
            T EE    F  E+K++ +  H+NLV LLGF S+ D   LVY  MPNG+L + L   +G 
Sbjct: 62  ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 121
Query: 584 RP-GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI 642
            P  W  R +IA G A G+ +LH   E   IH DIK  N+L     LD  + AKISDFG+
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANIL-----LDEAFTAKISDFGL 173
Query: 643 SKLLNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG-------R 694
           ++   K  Q      + GT  Y+APE LR   +T K D++SFGV+LLEII G       R
Sbjct: 174 ARASEKFAQXVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHR 232
Query: 695 RHXXXXXXXXXXXXXXXXXXXWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCN 754
                                ++   M                +D    E M  V   C 
Sbjct: 233 EPQLLLDIKEEIEDEEKTIEDYIDKKMND--------------ADSTSVEAMYSVASQCL 278
Query: 755 HPDPNLRPSMKKVIHMLE 772
           H   N RP +KKV  +L+
Sbjct: 279 HEKKNKRPDIKKVQQLLQ 296

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score =  132 bits (333), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/232 (40%), Positives = 123/232 (53%), Gaps = 28/232 (12%)
Query: 477 FREFTFQELQEATKGFSKL--------VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE 528
           F  F+F EL+  T  F +          G G  G VY+G +        +AVKKL   ++
Sbjct: 3   FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV----NNTTVAVKKLAAMVD 58
Query: 529 KTNEE----FMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF-HEGQ 583
            T EE    F  E+K+  +  H+NLV LLGF S+ D   LVY   PNG+L + L   +G 
Sbjct: 59  ITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT 118
Query: 584 RP-GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI 642
            P  W  R +IA G A G+ +LH   E   IH DIK  N+L     LD  + AKISDFG+
Sbjct: 119 PPLSWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANIL-----LDEAFTAKISDFGL 170
Query: 643 SKLLNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           ++   K  Q    + + GT  Y APE LR   +T K D++SFGV+LLEII G
Sbjct: 171 ARASEKFAQXVXXSRIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITG 221

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 18/225 (8%)
Query: 473 MEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNE 532
           +EI+F E T +E+          +G G  GKVYR      +  ++ A    ++DI +T E
Sbjct: 2   LEIDFAELTLEEI----------IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIE 51
Query: 533 EFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVE 592
               E K+     H N++ L G C +E    LV E    G L+  L   G+R      V 
Sbjct: 52  NVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL--SGKRIPPDILVN 109
Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD---TNYMAKISDFGISKLLNKD 649
            A+ +ARG+ YLH+E    IIH D+K  N+L+  K  +   +N + KI+DFG+++  ++ 
Sbjct: 110 WAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT 169
Query: 650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
              T  +  G   ++APE +R    +   DV+S+GV+L E++ G 
Sbjct: 170 ---TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score =  107 bits (267), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 123/234 (52%), Gaps = 16/234 (6%)
Query: 465 RNYFDPNSME---INFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL-KDTQIEIAV 520
           R Y DP++ E       EF  +EL        K+VG G  G+V  G L+L    +I +A+
Sbjct: 20  RTYVDPHTFEDPTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 521 KKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF 579
           K L+    EK   +F+ E  I+G+  H N++RL G  ++    ++V E M NG+L +FL 
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 580 HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD 639
               +   +Q V +  G+A G+ YL    +   +H D+  +N+L     +++N + K+SD
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL-----INSNLVCKVSD 190
Query: 640 FGISKLLNKDQTRTDTNMRGTMG--YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           FG+S++L  D     T   G +   + +PE +     T+  DV+S+G++L E++
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score =  107 bits (266), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 123/234 (52%), Gaps = 16/234 (6%)
Query: 465 RNYFDPNSME---INFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL-KDTQIEIAV 520
           R Y DP++ E       EF  +EL        K+VG G  G+V  G L+L    +I +A+
Sbjct: 20  RTYVDPHTYEDPTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 521 KKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF 579
           K L+    EK   +F+ E  I+G+  H N++RL G  ++    ++V E M NG+L +FL 
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 580 HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD 639
               +   +Q V +  G+A G+ YL    +   +H D+  +N+L     +++N + K+SD
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL-----INSNLVCKVSD 190
Query: 640 FGISKLLNKDQTRTDTNMRGTMG--YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           FG+S++L  D     T   G +   + +PE +     T+  DV+S+G++L E++
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score =  106 bits (265), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 123/234 (52%), Gaps = 16/234 (6%)
Query: 465 RNYFDPNSME---INFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL-KDTQIEIAV 520
           R Y DP++ E       EF  +EL        K+VG G  G+V  G L+L    +I +A+
Sbjct: 18  RTYVDPHTYEDPTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 76
Query: 521 KKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF 579
           K L+    EK   +F+ E  I+G+  H N++RL G  ++    ++V E M NG+L +FL 
Sbjct: 77  KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 136
Query: 580 HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD 639
               +   +Q V +  G+A G+ YL    +   +H D+  +N+L     +++N + K+SD
Sbjct: 137 KHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL-----INSNLVCKVSD 188
Query: 640 FGISKLLNKDQTRTDTNMRGTMG--YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           FG+S++L  D     T   G +   + +PE +     T+  DV+S+G++L E++
Sbjct: 189 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 242

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score =  106 bits (265), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 123/234 (52%), Gaps = 16/234 (6%)
Query: 465 RNYFDPNSME---INFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL-KDTQIEIAV 520
           R Y DP++ E       EF  +EL        K+VG G  G+V  G L+L    +I +A+
Sbjct: 20  RTYVDPHTYEDPTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 521 KKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF 579
           K L+    EK   +F+ E  I+G+  H N++RL G  ++    ++V E M NG+L +FL 
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR 138
Query: 580 HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD 639
               +   +Q V +  G+A G+ YL    +   +H D+  +N+L     +++N + K+SD
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL-----INSNLVCKVSD 190
Query: 640 FGISKLLNKDQTRTDTNMRGTMG--YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           FG+S++L  D     T   G +   + +PE +     T+  DV+S+G++L E++
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score =  106 bits (264), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 122/240 (50%), Gaps = 16/240 (6%)
Query: 456 PAARGLIKRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL-KDT 514
           P  R  +    Y DP        EF  +EL        K+VG G  G+V  G L+L    
Sbjct: 17  PGLRTFVDPHTYEDPTQ---TVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKK 72
Query: 515 QIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGT 573
           +I +A+K L+    EK   +F+ E  I+G+  H N++RL G  ++    ++V E M NG+
Sbjct: 73  EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 574 LSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNY 633
           L +FL     +   +Q V +  G+A G+ YL    +   +H D+  +N+L     +++N 
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL-----INSNL 184
Query: 634 MAKISDFGISKLLNKDQTRTDTNMRGTMG--YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + K+SDFG+S++L  D     T   G +   + +PE +     T+  DV+S+G++L E++
Sbjct: 185 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score =  106 bits (264), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 123/234 (52%), Gaps = 16/234 (6%)
Query: 465 RNYFDPNSME---INFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL-KDTQIEIAV 520
           R + DP++ E       EF  +EL        K+VG G  G+V  G L+L    +I +A+
Sbjct: 20  RTFVDPHTFEDPTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 521 KKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF 579
           K L+    EK   +F+ E  I+G+  H N++RL G  ++    ++V E M NG+L +FL 
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 580 HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD 639
               +   +Q V +  G+A G+ YL    +   +H D+  +N+L     +++N + K+SD
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNIL-----INSNLVCKVSD 190
Query: 640 FGISKLLNKDQTRTDTNMRGTMG--YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           FG+S++L  D     T   G +   + +PE +     T+  DV+S+G++L E++
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score =  105 bits (263), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 123/234 (52%), Gaps = 16/234 (6%)
Query: 465 RNYFDPNSME---INFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL-KDTQIEIAV 520
           R + DP++ E       EF  +EL        K+VG G  G+V  G L+L    +I +A+
Sbjct: 20  RTFVDPHTFEDPTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 521 KKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF 579
           K L+    EK   +F+ E  I+G+  H N++RL G  ++    ++V E M NG+L +FL 
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR 138
Query: 580 HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD 639
               +   +Q V +  G+A G+ YL    +   +H D+  +N+L     +++N + K+SD
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYL---SDMGAVHRDLAARNIL-----INSNLVCKVSD 190
Query: 640 FGISKLLNKDQTRTDTNMRGTMG--YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           FG+S++L  D     T   G +   + +PE +     T+  DV+S+G++L E++
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score =  105 bits (262), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 130/234 (55%), Gaps = 18/234 (7%)
Query: 467 YFDPNSME---INFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ-IEIAVKK 522
           Y +P++ E      R FT +E++ +     K++G+G SG+V  G LR+   + + +A+K 
Sbjct: 26  YAEPHTYEEPGRAGRSFT-REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKA 84
Query: 523 LEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FH 580
           L+    E+   +F++E  I+G+  H N++RL G  +     ++V E M NG+L  FL  H
Sbjct: 85  LKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH 144
Query: 581 EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF 640
           +GQ    +Q V +  GV  G+ YL    +   +H D+  +NVL     +D+N + K+SDF
Sbjct: 145 DGQFT-IMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVL-----VDSNLVCKVSDF 195
Query: 641 GISKLL--NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC 692
           G+S++L  + D   T T  +  + + APE +     ++  DV+SFGV++ E++ 
Sbjct: 196 GLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score =  105 bits (262), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 123/234 (52%), Gaps = 16/234 (6%)
Query: 465 RNYFDPNSME---INFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL-KDTQIEIAV 520
           R + DP++ E       EF  +EL        K+VG G  G+V  G L+L    +I +A+
Sbjct: 20  RTFVDPHTFEDPTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 521 KKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF 579
           K L+    EK   +F+ E  I+G+  H N++RL G  ++    ++V E M NG+L +FL 
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 580 HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD 639
               +   +Q V +  G+A G+ YL    +   +H D+  +N+L     +++N + K+SD
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL-----INSNLVCKVSD 190
Query: 640 FGISKLLNKDQTRTDTNMRGTMG--YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           FG+S++L  D     T   G +   + +PE +     T+  DV+S+G++L E++
Sbjct: 191 FGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score =  105 bits (262), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 119/228 (52%), Gaps = 17/228 (7%)
Query: 469 DPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKD--TQIEIAVKKLEKD 526
           DPN   + F      E+  +     K++G G  G+VY+G+L+      ++ +A+K L+  
Sbjct: 29  DPNQAVLKFT----TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG 84
Query: 527 -IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP 585
             EK   +F+ E  I+G+  H N++RL G  S+    +++ E M NG L  FL  +    
Sbjct: 85  YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEF 144
Query: 586 GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
             +Q V +  G+A G+ YL        +H D+  +N+L     +++N + K+SDFG+S++
Sbjct: 145 SVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNIL-----VNSNLVCKVSDFGLSRV 196
Query: 646 LNKDQTRTDTNMRGTMG--YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           L  D   T T   G +   + APE +     T+  DV+SFG+++ E++
Sbjct: 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVM 244

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score =  105 bits (262), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 130/234 (55%), Gaps = 18/234 (7%)
Query: 467 YFDPNSME---INFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ-IEIAVKK 522
           Y +P++ E      R FT +E++ +     K++G+G SG+V  G LR+   + + +A+K 
Sbjct: 26  YAEPHTYEEPGRAGRSFT-REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKA 84
Query: 523 LEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FH 580
           L+    E+   +F++E  I+G+  H N++RL G  +     ++V E M NG+L  FL  H
Sbjct: 85  LKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH 144
Query: 581 EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF 640
           +GQ    +Q V +  GV  G+ YL    +   +H D+  +NVL     +D+N + K+SDF
Sbjct: 145 DGQFT-IMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVL-----VDSNLVCKVSDF 195
Query: 641 GISKLL--NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC 692
           G+S++L  + D   T T  +  + + APE +     ++  DV+SFGV++ E++ 
Sbjct: 196 GLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score =  104 bits (260), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 123/234 (52%), Gaps = 16/234 (6%)
Query: 465 RNYFDPNSME---INFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL-KDTQIEIAV 520
           R + DP++ E       EF  +EL        K+VG G  G+V  G L+L    +I +A+
Sbjct: 20  RTFVDPHTFEDPTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 521 KKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF 579
           K L+    EK   +F+ E  I+G+  H N++RL G  ++    ++V E M NG+L +FL 
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 580 HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD 639
               +   +Q V +  G+A G+ YL    +   +H D+  +N+L     +++N + K+SD
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL-----INSNLVCKVSD 190
Query: 640 FGISKLLNKDQTRTDTNMRGTMG--YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           FG++++L  D     T   G +   + +PE +     T+  DV+S+G++L E++
Sbjct: 191 FGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score =  103 bits (258), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 122/234 (52%), Gaps = 16/234 (6%)
Query: 465 RNYFDPNSME---INFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL-KDTQIEIAV 520
           R + DP++ E       EF  +EL        K+VG G  G+V  G L+L    +I +A+
Sbjct: 20  RTFVDPHTFEDPTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 521 KKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF 579
           K L+    EK   +F+ E  I+G+  H N++RL G  ++    ++V E M NG+L +FL 
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 580 HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD 639
               +   +Q V +  G+A G+ YL    +   +H D+  +N+L     +++N + K+SD
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL-----INSNLVCKVSD 190
Query: 640 FGISKLLNKDQTRTDTNMRGTMG--YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           FG+ ++L  D     T   G +   + +PE +     T+  DV+S+G++L E++
Sbjct: 191 FGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score =  102 bits (255), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 125/238 (52%), Gaps = 29/238 (12%)
Query: 473 MEINFREFTFQELQEATKGFSK-----------LVGTGSSGKVYRGILRLK-DTQIEIAV 520
           M+I    FTF++  EA + F+K           ++G G  G+V  G L+L    +I +A+
Sbjct: 7   MKIFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAI 66
Query: 521 KKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF 579
           K L+    EK   +F++E  I+G+  H N++ L G  ++    +++ E M NG+L +FL 
Sbjct: 67  KTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR 126
Query: 580 HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD 639
               +   +Q V +  G+A G+ YL    +   +H D+  +N+L     +++N + K+SD
Sbjct: 127 QNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNIL-----VNSNLVCKVSD 178
Query: 640 FGISKLLNKDQTRTDTNMRGTMG------YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           FG+S+ L  D   +D      +G      + APE ++    T+  DV+S+G+++ E++
Sbjct: 179 FGLSRFLEDDT--SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 234

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 135/290 (46%), Gaps = 35/290 (12%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLL 553
           +G GS G V+R      D  ++I    +E+D   E+ NE F+ E+ I+ R  H N+V  +
Sbjct: 45  IGAGSFGTVHRAEWHGSDVAVKIL---MEQDFHAERVNE-FLREVAIMKRLRHPNIVLFM 100
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEECETQ 611
           G  ++     +V E +  G+L   L   G R    +R  + +A  VA+G+ YLH      
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPP 159
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           I+H D+K  N+L+D K     Y  K+ DFG+S+L             GT  ++APE LR+
Sbjct: 160 IVHRDLKSPNLLVDKK-----YTVKVCDFGLSRL-KASXFLXSKXAAGTPEWMAPEVLRD 213
Query: 672 VPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXXXXWVISCMLSRNLQVLVS 731
            P   K DV+SFGV+L E+   ++                        C   + L++  +
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG-------FKC---KRLEIPRN 263
Query: 732 HDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMPP 781
            +P+V + +E        G W N  +P  RPS   ++ +L   ++  +PP
Sbjct: 264 LNPQVAAIIE--------GCWTN--EPWKRPSFATIMDLLRPLIKSAVPP 303

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 117/226 (51%), Gaps = 13/226 (5%)
Query: 470 PNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL-KDTQIEIAVKKLEKD-I 527
           P        EF  +EL        K+VG G  G+V  G L+L    +I +A+K L+    
Sbjct: 16  PRGSTQTVHEFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 74
Query: 528 EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGW 587
           EK   +F+ E  I+G+  H N++RL G  ++    ++V E M NG+L +FL     +   
Sbjct: 75  EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 134
Query: 588 VQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
           +Q V +  G+A G+ YL    +   +H D+  +N+L     +++N + K+SDFG+S++L 
Sbjct: 135 IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNIL-----INSNLVCKVSDFGLSRVLE 186
Query: 648 KDQTRTDTNMRGTMG--YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            D     T   G +   + +PE +     T+  DV+S+G++L E++
Sbjct: 187 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 232

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 13/217 (5%)
Query: 479 EFTFQELQEATKGFSKLVGTGSSGKVYRGILRL-KDTQIEIAVKKLEKD-IEKTNEEFMT 536
           EF  +EL        K+VG G  G+V  G L+L    +I +A+K L+    EK   +F+ 
Sbjct: 8   EFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 66
Query: 537 ELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG 596
           E  I+G+  H N++RL G  ++    ++V E M NG+L +FL     +   +Q V +  G
Sbjct: 67  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 126
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           +A G+ YL    +   +H D+  +N+L     +++N + K+SDFG+S++L  D     T 
Sbjct: 127 IASGMKYL---SDMGYVHRDLAARNIL-----INSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 657 MRGTMG--YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
             G +   + +PE +     T+  DV+S+G++L E++
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 215

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 13/217 (5%)
Query: 479 EFTFQELQEATKGFSKLVGTGSSGKVYRGILRL-KDTQIEIAVKKLEKD-IEKTNEEFMT 536
           EF  +EL        K+VG G  G+V  G L+L    +I +A+K L+    EK   +F+ 
Sbjct: 8   EFA-KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 66
Query: 537 ELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG 596
           E  I+G+  H N++RL G  ++    ++V E M NG+L +FL     +   +Q V +  G
Sbjct: 67  EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG 126
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           +A G+ YL    +   +H D+  +N+L     +++N + K+SDFG+S++L  D     T 
Sbjct: 127 IASGMKYL---SDMGYVHRDLAARNIL-----INSNLVCKVSDFGLSRVLEDDPEAAYTT 178
Query: 657 MRGTMG--YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
             G +   + +PE +     T+  DV+S+G++L E++
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 215

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score =  101 bits (252), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 137/290 (47%), Gaps = 35/290 (12%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLL 553
           +G GS G V+R      D  ++I    +E+D   E+ NE F+ E+ I+ R  H N+V  +
Sbjct: 45  IGAGSFGTVHRAEWHGSDVAVKIL---MEQDFHAERVNE-FLREVAIMKRLRHPNIVLFM 100
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEECETQ 611
           G  ++     +V E +  G+L   L   G R    +R  + +A  VA+G+ YLH      
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPP 159
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           I+H ++K  N+L+D K     Y  K+ DFG+S+L       +  +  GT  ++APE LR+
Sbjct: 160 IVHRNLKSPNLLVDKK-----YTVKVCDFGLSRL-KASTFLSSKSAAGTPEWMAPEVLRD 213
Query: 672 VPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXXXXWVISCMLSRNLQVLVS 731
            P   K DV+SFGV+L E+   ++                        C   + L++  +
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG-------FKC---KRLEIPRN 263
Query: 732 HDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMPP 781
            +P+V + +E        G W N  +P  RPS   ++ +L   ++  +PP
Sbjct: 264 LNPQVAAIIE--------GCWTN--EPWKRPSFATIMDLLRPLIKSAVPP 303

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 99.8 bits (247), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 123/241 (51%), Gaps = 18/241 (7%)
Query: 456 PAARGLIKRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ 515
           P  +  I    Y DPN     F     +EL  +     +++G G  G+V  G L+L   +
Sbjct: 15  PGTKTYIDPETYEDPNRAVHQFA----KELDASCIKIERVIGAGEFGEVCSGRLKLPGKR 70
Query: 516 -IEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGT 573
            + +A+K L+    EK   +F+ E  I+G+  H N+V L G  +     ++V E M NG 
Sbjct: 71  DVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGA 130
Query: 574 LSNFLF-HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTN 632
           L  FL  H+GQ    +Q V +  G+A G+ YL    +   +H D+  +N+L     +++N
Sbjct: 131 LDAFLRKHDGQFT-VIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNIL-----VNSN 181
Query: 633 YMAKISDFGISKLLNKDQTRTDTNMRGTMG--YVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
            + K+SDFG+S+++  D     T   G +   + APE ++    T+  DV+S+G+++ E+
Sbjct: 182 LVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEV 241
Query: 691 I 691
           +
Sbjct: 242 M 242

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 122/234 (52%), Gaps = 16/234 (6%)
Query: 465 RNYFDPNSME---INFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLK-DTQIEIAV 520
           R + DP + E      REF  +E+  +     K++G G  G+V  G L++    +I +A+
Sbjct: 4   RTFVDPFTFEDPNQAVREFA-KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAI 62
Query: 521 KKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF 579
           K L+    +K   +F++E  I+G+  H N++ L G  ++    +++ E M NG+L  FL 
Sbjct: 63  KTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR 122
Query: 580 HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD 639
               R   +Q V +  G+  G+ YL    +   +H D+  +N+L     +++N + K+SD
Sbjct: 123 KNDGRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNIL-----VNSNLVCKVSD 174
Query: 640 FGISKLLNKDQTRTDTNMRGTMG--YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           FG+S++L  D     T   G +   + APE +     T+  DV+S+G+++ E++
Sbjct: 175 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 228

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 95.5 bits (236), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 120/229 (52%), Gaps = 16/229 (6%)
Query: 467 YFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEK 525
           Y DPN       EF  +E++ +     +++G G  G+V  G L+L    ++ +A+K L+ 
Sbjct: 5   YEDPNQA---VHEFA-KEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKV 60
Query: 526 D-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR 584
              EK   +F+ E  I+G+  H N++ L G  ++    ++V E M NG+L  FL     +
Sbjct: 61  GYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ 120
Query: 585 PGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK 644
              +Q V +  G++ G+ YL    +   +H D+  +N+L     +++N + K+SDFG+S+
Sbjct: 121 FTVIQLVGMLRGISAGMKYL---SDMGYVHRDLAARNIL-----INSNLVCKVSDFGLSR 172
Query: 645 LLNKDQTRTDTNMRGTMG--YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           +L  D     T   G +   + APE +     T+  DV+S+G+++ E++
Sbjct: 173 VLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVV 221

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 109/199 (54%), Gaps = 12/199 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V +G+ R++  QI++A+K L++  EK + EE M E +I+ +  +  +VRL+G
Sbjct: 18  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 555 FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            C  E   +LV E+   G L  FL  + +        E+   V+ G+ YL E+     +H
Sbjct: 78  VCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVH 133
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT--MGYVAPEWLRNV 672
            D+  +NVLL    ++ +Y AKISDFG+SK L  D +       G   + + APE +   
Sbjct: 134 RDLAARNVLL----VNRHY-AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 188
Query: 673 PVTTKVDVFSFGVMLLEII 691
             +++ DV+S+GV + E +
Sbjct: 189 KFSSRSDVWSYGVTMWEAL 207

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 122/229 (53%), Gaps = 18/229 (7%)
Query: 469 DPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIE-IAVKKLEKD- 526
           DPN      REF  +E+  +     +++G G  G+V RG L+    +   +A+K L+   
Sbjct: 1   DPNEA---VREFA-KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGY 56
Query: 527 IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPG 586
            E+   EF++E  I+G+  H N++RL G  +     +++ E M NG L +FL     +  
Sbjct: 57  TERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFT 116
Query: 587 WVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL 646
            +Q V +  G+A G+ YL    E   +H D+  +N+L     +++N + K+SDFG+S+ L
Sbjct: 117 VIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNIL-----VNSNLVCKVSDFGLSRFL 168
Query: 647 NKDQTR-TDTNMRG---TMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            ++ +  T+T+  G    + + APE +     T+  D +S+G+++ E++
Sbjct: 169 EENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 217

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 116/218 (53%), Gaps = 13/218 (5%)
Query: 478 REFTFQELQEATKGFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKD-IEKTNEEFM 535
           REF  +E+  +     K++G G  G+V  G L++    +I +A+K L+    +K   +F+
Sbjct: 5   REFA-KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFL 63
Query: 536 TELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL 595
           +E  I+G+  H N++ L G  ++    +++ E M NG+L  FL     R   +Q V +  
Sbjct: 64  SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR 123
Query: 596 GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT 655
           G+  G+ YL    +   +H D+  +N+L     +++N + K+SDFG+S++L  D     T
Sbjct: 124 GIGSGMKYLS---DMSYVHRDLAARNIL-----VNSNLVCKVSDFGMSRVLEDDPEAAYT 175
Query: 656 NMRGTMG--YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
              G +   + APE +     T+  DV+S+G+++ E++
Sbjct: 176 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 213

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 107/200 (53%), Gaps = 12/200 (6%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F + +G+G  G V+ G    KD   ++A+K + ++   + E+F+ E +++ +  H  LV+
Sbjct: 11  FVQEIGSGQFGLVHLGYWLNKD---KVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L G C E+    LV+E M +G LS++L  +         + + L V  G+ YL E C   
Sbjct: 67  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 123
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           +IH D+  +N L+       N + K+SDFG+++ +  DQ  + T  +  + + +PE    
Sbjct: 124 VIHRDLAARNCLVG-----ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 178
Query: 672 VPVTTKVDVFSFGVMLLEII 691
              ++K DV+SFGV++ E+ 
Sbjct: 179 SRYSSKSDVWSFGVLMWEVF 198

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 107/200 (53%), Gaps = 12/200 (6%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F + +G+G  G V+ G    KD   ++A+K + ++   + E+F+ E +++ +  H  LV+
Sbjct: 14  FVQEIGSGQFGLVHLGYWLNKD---KVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQ 69
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L G C E+    LV+E M +G LS++L  +         + + L V  G+ YL E C   
Sbjct: 70  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 126
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           +IH D+  +N L+       N + K+SDFG+++ +  DQ  + T  +  + + +PE    
Sbjct: 127 VIHRDLAARNCLVG-----ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 181
Query: 672 VPVTTKVDVFSFGVMLLEII 691
              ++K DV+SFGV++ E+ 
Sbjct: 182 SRYSSKSDVWSFGVLMWEVF 201

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 107/200 (53%), Gaps = 12/200 (6%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F + +G+G  G V+ G    KD   ++A+K + ++   + E+F+ E +++ +  H  LV+
Sbjct: 9   FVQEIGSGQFGLVHLGYWLNKD---KVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQ 64
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L G C E+    LV+E M +G LS++L  +         + + L V  G+ YL E C   
Sbjct: 65  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 121
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           +IH D+  +N L+       N + K+SDFG+++ +  DQ  + T  +  + + +PE    
Sbjct: 122 VIHRDLAARNCLVG-----ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 176
Query: 672 VPVTTKVDVFSFGVMLLEII 691
              ++K DV+SFGV++ E+ 
Sbjct: 177 SRYSSKSDVWSFGVLMWEVF 196

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 109/199 (54%), Gaps = 12/199 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V +G+ R++  QI++A+K L++  EK + EE M E +I+ +  +  +VRL+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 555 FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            C  E   +LV E+   G L  FL  + +        E+   V+ G+ YL E+     +H
Sbjct: 404 VCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVH 459
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT--MGYVAPEWLRNV 672
            ++  +NVLL    ++ +Y AKISDFG+SK L  D +       G   + + APE +   
Sbjct: 460 RNLAARNVLL----VNRHY-AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 514
Query: 673 PVTTKVDVFSFGVMLLEII 691
             +++ DV+S+GV + E +
Sbjct: 515 KFSSRSDVWSYGVTMWEAL 533

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 19  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 76  CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIH 132
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 133 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF 187
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 188 SIKSDVWAFGVLLWEI 203

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 26  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 83  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 139
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 140 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF 194
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 195 SIKSDVWAFGVLLWEI 210

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 107/200 (53%), Gaps = 12/200 (6%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F + +G+G  G V+ G    KD   ++A+K + K+   + ++F+ E +++ +  H  LV+
Sbjct: 31  FVQEIGSGQFGLVHLGYWLNKD---KVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQ 86
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L G C E+    LV+E M +G LS++L  +         + + L V  G+ YL E C   
Sbjct: 87  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 143
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           +IH D+  +N L+       N + K+SDFG+++ +  DQ  + T  +  + + +PE    
Sbjct: 144 VIHRDLAARNCLVG-----ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 198
Query: 672 VPVTTKVDVFSFGVMLLEII 691
              ++K DV+SFGV++ E+ 
Sbjct: 199 SRYSSKSDVWSFGVLMWEVF 218

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 26  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 83  CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 139
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 140 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 195 SIKSDVWAFGVLLWEI 210

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 22  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 79  CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 135
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 136 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF 190
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 191 SIKSDVWAFGVLLWEI 206

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 25  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 82  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 138
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 139 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 193
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 194 SIKSDVWAFGVLLWEI 209

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 26  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 83  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 139
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 140 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 195 SIKSDVWAFGVLLWEI 210

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 12/223 (5%)
Query: 469 DPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE 528
           D  +  + F+     E++         +G G  G+VY G+   K   + +AVK L++D  
Sbjct: 13  DLGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVW--KKYSLTVAVKTLKEDTM 70
Query: 529 KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGW 587
           +  EEF+ E  ++    H NLV+LLG C+ E    +V E MP G L ++L     +    
Sbjct: 71  EV-EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTA 129
Query: 588 VQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
           V  + +A  ++  + YL ++     IH D+  +N L+       N++ K++DFG+S+L+ 
Sbjct: 130 VVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVG-----ENHVVKVADFGLSRLMT 181
Query: 648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
            D        +  + + APE L     + K DV++FGV+L EI
Sbjct: 182 GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 93.2 bits (230), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 21  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 78  CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 135 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 190 SIKSDVWAFGVLLWEI 205

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 93.2 bits (230), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 21  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 78  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 135 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 190 SIKSDVWAFGVLLWEI 205

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 21  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 78  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 135 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 190 SIKSDVWAFGVLLWEI 205

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 26  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 83  CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIH 139
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 140 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 195 SIKSDVWAFGVLLWEI 210

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 21  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 78  CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 135 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 190 SIKSDVWAFGVLLWEI 205

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 21  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 78  CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 135 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 190 SIKSDVWAFGVLLWEI 205

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 16/207 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKN 548
           F++++G G  G VY G L   D  +I  AVK L +  DI + ++ F+TE  I+    H N
Sbjct: 35  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPN 93
Query: 549 LVRLLGFC-SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           ++ LLG C   E   L+V   M +G L NF+ +E   P     +   L VA+G+ +L   
Sbjct: 94  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 150
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNK--DQTRTDTNMRGTMGYV 664
              + +H D+  +N +LD K     +  K++DFG+++ +L+K  D     T  +  + ++
Sbjct: 151 ASKKFVHRDLAARNCMLDEK-----FTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWM 205
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           A E L+    TTK DV+SFGV+L E++
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELM 232

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 26  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 83  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 139
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 140 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 195 SIKSDVWAFGVLLWEI 210

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 23  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 80  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 136
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 137 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 191
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 192 SIKSDVWAFGVLLWEI 207

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 23  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 80  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 136
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 137 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 191
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 192 SIKSDVWAFGVLLWEI 207

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 21  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 78  CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 135 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 190 SIKSDVWAFGVLLWEI 205

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 23  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 80  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 136
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 137 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKF 191
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 192 SIKSDVWAFGVLLWEI 207

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 34  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 91  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 147
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 148 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 202
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 203 SIKSDVWAFGVLLWEI 218

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 22  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 79  CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIH 135
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 136 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKF 190
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 191 SIKSDVWAFGVLLWEI 206

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 120/246 (48%), Gaps = 22/246 (8%)
Query: 453 YYSPAARGLIKRRNYFDPN-------SMEINFREFTFQELQEATKGFSKLVGTGSSGKVY 505
           ++S  A GLI   +Y  P         +  N+ ++   E++         +G G  G+VY
Sbjct: 181 HHSTVADGLITTLHYPAPKRNKPTIYGVSPNYDKW---EMERTDITMKHKLGGGQYGEVY 237
Query: 506 RGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV 565
            G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG C+ E    ++
Sbjct: 238 EGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294
Query: 566 YELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLL 624
            E M  G L ++L     Q    V  + +A  ++  + YL ++     IH ++  +N L+
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLV 351
Query: 625 DLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFG 684
                  N++ K++DFG+S+L+  D        +  + + APE L     + K DV++FG
Sbjct: 352 G-----ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 406
Query: 685 VMLLEI 690
           V+L EI
Sbjct: 407 VLLWEI 412

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 19  LGGGQFGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 76  CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIH 132
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 133 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF 187
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 188 SIKSDVWAFGVLLWEI 203

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 113/213 (53%), Gaps = 12/213 (5%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKD-IEKTNEEFMTELKI 540
           +E+  +     K++G G  G+V  G L++    +I +A+K L+    +K   +F++E  I
Sbjct: 3   KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 62
Query: 541 IGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARG 600
           +G+  H N++ L G  ++    +++ E M NG+L  FL     R   +Q V +  G+  G
Sbjct: 63  MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 122
Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
           + YL    +   +H D+  +N+L     +++N + K+SDFG+S++L  D     T   G 
Sbjct: 123 MKYLS---DMSYVHRDLAARNIL-----VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 174
Query: 661 MG--YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           +   + APE +     T+  DV+S+G+++ E++
Sbjct: 175 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 207

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 28/223 (12%)
Query: 475 INFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF 534
           I+++E   +E+          VG G+ G V +   R KD    +A+K++E + E+  + F
Sbjct: 6   IDYKEIEVEEV----------VGRGAFGVVCKAKWRAKD----VAIKQIESESER--KAF 49
Query: 535 MTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGW--VQRVE 592
           + EL+ + R +H N+V+L G C   +   LV E    G+L N L      P +     + 
Sbjct: 50  IVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 107
Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
             L  ++G+ YLH      +IH D+KP N+LL    +    + KI DFG +     D   
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL----VAGGTVLKICDFGTAC----DIQT 159
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
             TN +G+  ++APE       + K DVFS+G++L E+I  R+
Sbjct: 160 HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 202

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+VY G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG 
Sbjct: 19  LGGGQYGEVYEGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
           C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++     IH
Sbjct: 76  CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIH 132
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+  +N L+       N++ K++DFG+S+L+  D        +  + + APE L     
Sbjct: 133 RDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKF 187
Query: 675 TTKVDVFSFGVMLLEI 690
           + K DV++FGV+L EI
Sbjct: 188 SIKSDVWAFGVLLWEI 203

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 115/217 (52%), Gaps = 18/217 (8%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKD-IEKTNEEFMTELKI 540
           +E+  +     +++G G  G+V  G L+L    +I +A+K L+    EK   +F++E  I
Sbjct: 2   KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 61
Query: 541 IGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARG 600
           +G+  H N++ L G  ++    +++ E M NG+L +FL     +   +Q V +  G+A G
Sbjct: 62  MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 121
Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
           + YL    +   +H  +  +N+L     +++N + K+SDFG+S+ L  D   +D      
Sbjct: 122 MKYL---ADMNYVHRALAARNIL-----VNSNLVCKVSDFGLSRFLEDDT--SDPTYTSA 171
Query: 661 MG------YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           +G      + APE ++    T+  DV+S+G+++ E++
Sbjct: 172 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 208

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 28/223 (12%)
Query: 475 INFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF 534
           I+++E   +E+          VG G+ G V +   R KD    +A+K++E + E+  + F
Sbjct: 5   IDYKEIEVEEV----------VGRGAFGVVCKAKWRAKD----VAIKQIESESER--KAF 48
Query: 535 MTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGW--VQRVE 592
           + EL+ + R +H N+V+L G C   +   LV E    G+L N L      P +     + 
Sbjct: 49  IVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 106
Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
             L  ++G+ YLH      +IH D+KP N+LL    +    + KI DFG +     D   
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL----VAGGTVLKICDFGTAC----DIQT 158
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
             TN +G+  ++APE       + K DVFS+G++L E+I  R+
Sbjct: 159 HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 201

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 12/200 (6%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F + +G+G  G V+ G    KD   ++A+K + ++   + E+F+ E +++ +  H  LV+
Sbjct: 12  FVQEIGSGQFGLVHLGYWLNKD---KVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQ 67
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L G C E+    LV E M +G LS++L  +         + + L V  G+ YL E C   
Sbjct: 68  LYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 124
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           +IH D+  +N L+       N + K+SDFG+++ +  DQ  + T  +  + + +PE    
Sbjct: 125 VIHRDLAARNCLVG-----ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 179
Query: 672 VPVTTKVDVFSFGVMLLEII 691
              ++K DV+SFGV++ E+ 
Sbjct: 180 SRYSSKSDVWSFGVLMWEVF 199

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 120/246 (48%), Gaps = 22/246 (8%)
Query: 453 YYSPAARGLIKRRNYFDPN-------SMEINFREFTFQELQEATKGFSKLVGTGSSGKVY 505
           ++S  A GLI   +Y  P         +  N+ ++   E++         +G G  G+VY
Sbjct: 220 HHSTVADGLITTLHYPAPKRNKPTVYGVSPNYDKW---EMERTDITMKHKLGGGQYGEVY 276
Query: 506 RGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV 565
            G+   K   + +AVK L++D  +  EEF+ E  ++    H NLV+LLG C+ E    ++
Sbjct: 277 EGVW--KKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 333
Query: 566 YELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLL 624
            E M  G L ++L     Q    V  + +A  ++  + YL ++     IH ++  +N L+
Sbjct: 334 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLV 390
Query: 625 DLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFG 684
                  N++ K++DFG+S+L+  D        +  + + APE L     + K DV++FG
Sbjct: 391 G-----ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 445
Query: 685 VMLLEI 690
           V+L EI
Sbjct: 446 VLLWEI 451

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 16/207 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKN 548
           F++++G G  G VY G L   D  +I  AVK L +  DI + ++ F+TE  I+    H N
Sbjct: 33  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPN 91
Query: 549 LVRLLGFC-SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           ++ LLG C   E   L+V   M +G L NF+ +E   P     +   L VA+G+ YL   
Sbjct: 92  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 148
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT---MGYV 664
              + +H D+  +N +LD K     +  K++DFG+++ +   +  +  N  G    + ++
Sbjct: 149 ASKKFVHRDLAARNCMLDEK-----FTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWM 203
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           A E L+    TTK DV+SFGV+L E++
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELM 230

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 16/207 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKN 548
           F++++G G  G VY G L   D  +I  AVK L +  DI + ++ F+TE  I+    H N
Sbjct: 93  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPN 151
Query: 549 LVRLLGFC-SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           ++ LLG C   E   L+V   M +G L NF+ +E   P     +   L VA+G+ +L   
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 208
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNK--DQTRTDTNMRGTMGYV 664
              + +H D+  +N +LD K     +  K++DFG+++ + +K  D     T  +  + ++
Sbjct: 209 ASKKFVHRDLAARNCMLDEK-----FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 263
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           A E L+    TTK DV+SFGV+L E++
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWELM 290

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 106/200 (53%), Gaps = 12/200 (6%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F + +G+G  G V+ G    KD   ++A+K + ++   + E+F+ E +++ +  H  LV+
Sbjct: 11  FVQEIGSGQFGLVHLGYWLNKD---KVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L G C E+    LV+E M +G LS++L  +         + + L V  G+ YL E     
Sbjct: 67  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---AS 123
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           +IH D+  +N L+       N + K+SDFG+++ +  DQ  + T  +  + + +PE    
Sbjct: 124 VIHRDLAARNCLVG-----ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 178
Query: 672 VPVTTKVDVFSFGVMLLEII 691
              ++K DV+SFGV++ E+ 
Sbjct: 179 SRYSSKSDVWSFGVLMWEVF 198

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 16/207 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKN 548
           F++++G G  G VY G L   D  +I  AVK L +  DI + ++ F+TE  I+    H N
Sbjct: 52  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPN 110
Query: 549 LVRLLGFC-SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           ++ LLG C   E   L+V   M +G L NF+ +E   P     +   L VA+G+ YL   
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 167
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT---MGYV 664
              + +H D+  +N +LD K     +  K++DFG+++ +   +  +  N  G    + ++
Sbjct: 168 ASKKFVHRDLAARNCMLDEK-----FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 222
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           A E L+    TTK DV+SFGV+L E++
Sbjct: 223 ALESLQTQKFTTKSDVWSFGVLLWELM 249

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 16/207 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKN 548
           F++++G G  G VY G L   D  +I  AVK L +  DI + ++ F+TE  I+    H N
Sbjct: 53  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPN 111
Query: 549 LVRLLGFC-SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           ++ LLG C   E   L+V   M +G L NF+ +E   P     +   L VA+G+ YL   
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 168
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT---MGYV 664
              + +H D+  +N +LD K     +  K++DFG+++ +   +  +  N  G    + ++
Sbjct: 169 ASKKFVHRDLAARNCMLDEK-----FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 223
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           A E L+    TTK DV+SFGV+L E++
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWELM 250

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 16/207 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKN 548
           F++++G G  G VY G L   D  +I  AVK L +  DI + ++ F+TE  I+    H N
Sbjct: 34  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPN 92
Query: 549 LVRLLGFC-SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           ++ LLG C   E   L+V   M +G L NF+ +E   P     +   L VA+G+ +L   
Sbjct: 93  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 149
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNK--DQTRTDTNMRGTMGYV 664
              + +H D+  +N +LD K     +  K++DFG+++ + +K  D     T  +  + ++
Sbjct: 150 ASKKFVHRDLAARNCMLDEK-----FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           A E L+    TTK DV+SFGV+L E++
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELM 231

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 117/218 (53%), Gaps = 20/218 (9%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIE-IAVKKLEKD-IEKTNEEFMTELKI 540
           +E+  +     +++G G  G+V RG L+    +   +A+K L+    E+   EF++E  I
Sbjct: 9   KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 68
Query: 541 IGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVAR 599
           +G+  H N++RL G  +     +++ E M NG L +FL  ++GQ    +Q V +  G+A 
Sbjct: 69  MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV-IQLVGMLRGIAS 127
Query: 600 GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG 659
           G+ YL    E   +H D+  +N+L     +++N + K+SDFG+S+ L  ++  +D     
Sbjct: 128 GMRYL---AEMSYVHRDLAARNIL-----VNSNLVCKVSDFGLSRFL--EENSSDPTYTS 177
Query: 660 TMG------YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           ++G      + APE +     T+  D +S+G+++ E++
Sbjct: 178 SLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 215

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 16/207 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKN 548
           F++++G G  G VY G L   D  +I  AVK L +  DI + ++ F+TE  I+    H N
Sbjct: 34  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPN 92
Query: 549 LVRLLGFC-SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           ++ LLG C   E   L+V   M +G L NF+ +E   P     +   L VA+G+ YL   
Sbjct: 93  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 149
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT---MGYV 664
              + +H D+  +N +LD K     +  K++DFG+++ +   +  +  N  G    + ++
Sbjct: 150 ASKKFVHRDLAARNCMLDEK-----FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           A E L+    TTK DV+SFGV+L E++
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELM 231

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 16/207 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKN 548
           F++++G G  G VY G L   D  +I  AVK L +  DI + ++ F+TE  I+    H N
Sbjct: 33  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPN 91
Query: 549 LVRLLGFC-SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           ++ LLG C   E   L+V   M +G L NF+ +E   P     +   L VA+G+ YL   
Sbjct: 92  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 148
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT---MGYV 664
              + +H D+  +N +LD K     +  K++DFG+++ +   +  +  N  G    + ++
Sbjct: 149 ASKKFVHRDLAARNCMLDEK-----FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 203
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           A E L+    TTK DV+SFGV+L E++
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELM 230

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 16/207 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKN 548
           F++++G G  G VY G L   D  +I  AVK L +  DI + ++ F+TE  I+    H N
Sbjct: 29  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPN 87
Query: 549 LVRLLGFC-SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           ++ LLG C   E   L+V   M +G L NF+ +E   P     +   L VA+G+ YL   
Sbjct: 88  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 144
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT---MGYV 664
              + +H D+  +N +LD K     +  K++DFG+++ +   +  +  N  G    + ++
Sbjct: 145 ASKKFVHRDLAARNCMLDEK-----FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 199
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           A E L+    TTK DV+SFGV+L E++
Sbjct: 200 ALESLQTQKFTTKSDVWSFGVLLWELM 226

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 16/207 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKN 548
           F++++G G  G VY G L   D  +I  AVK L +  DI + ++ F+TE  I+    H N
Sbjct: 32  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPN 90
Query: 549 LVRLLGFC-SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           ++ LLG C   E   L+V   M +G L NF+ +E   P     +   L VA+G+ YL   
Sbjct: 91  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 147
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT---MGYV 664
              + +H D+  +N +LD K     +  K++DFG+++ +   +  +  N  G    + ++
Sbjct: 148 ASKKFVHRDLAARNCMLDEK-----FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 202
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           A E L+    TTK DV+SFGV+L E++
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELM 229

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 16/207 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKN 548
           F++++G G  G VY G L   D  +I  AVK L +  DI + ++ F+TE  I+    H N
Sbjct: 34  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPN 92
Query: 549 LVRLLGFC-SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           ++ LLG C   E   L+V   M +G L NF+ +E   P     +   L VA+G+ +L   
Sbjct: 93  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 149
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNK--DQTRTDTNMRGTMGYV 664
              + +H D+  +N +LD K     +  K++DFG+++ + +K  D     T  +  + ++
Sbjct: 150 ASKKFVHRDLAARNCMLDEK-----FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           A E L+    TTK DV+SFGV+L E++
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELM 231

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 16/207 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKN 548
           F++++G G  G VY G L   D  +I  AVK L +  DI + ++ F+TE  I+    H N
Sbjct: 26  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPN 84
Query: 549 LVRLLGFC-SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           ++ LLG C   E   L+V   M +G L NF+ +E   P     +   L VA+G+ YL   
Sbjct: 85  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 141
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT---MGYV 664
              + +H D+  +N +LD K     +  K++DFG+++ +   +  +  N  G    + ++
Sbjct: 142 ASKKFVHRDLAARNCMLDEK-----FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 196
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           A E L+    TTK DV+SFGV+L E++
Sbjct: 197 ALESLQTQKFTTKSDVWSFGVLLWELM 223

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 16/207 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKN 548
           F++++G G  G VY G L   D  +I  AVK L +  DI + ++ F+TE  I+    H N
Sbjct: 34  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPN 92
Query: 549 LVRLLGFC-SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           ++ LLG C   E   L+V   M +G L NF+ +E   P     +   L VA+G+ YL   
Sbjct: 93  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 149
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT---MGYV 664
              + +H D+  +N +LD K     +  K++DFG+++ +   +  +  N  G    + ++
Sbjct: 150 ASKKFVHRDLAARNCMLDEK-----FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           A E L+    TTK DV+SFGV+L E++
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELM 231

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 16/207 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKN 548
           F++++G G  G VY G L   D  +I  AVK L +  DI + ++ F+TE  I+    H N
Sbjct: 39  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPN 97
Query: 549 LVRLLGFC-SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           ++ LLG C   E   L+V   M +G L NF+ +E   P     +   L VA+G+ +L   
Sbjct: 98  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 154
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNK--DQTRTDTNMRGTMGYV 664
              + +H D+  +N +LD K     +  K++DFG+++ + +K  D     T  +  + ++
Sbjct: 155 ASKKFVHRDLAARNCMLDEK-----FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 209
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           A E L+    TTK DV+SFGV+L E++
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWELM 236

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 16/207 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKN 548
           F++++G G  G VY G L   D  +I  AVK L +  DI + ++ F+TE  I+    H N
Sbjct: 35  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPN 93
Query: 549 LVRLLGFC-SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           ++ LLG C   E   L+V   M +G L NF+ +E   P     +   L VA+G+ +L   
Sbjct: 94  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 150
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNK--DQTRTDTNMRGTMGYV 664
              + +H D+  +N +LD K     +  K++DFG+++ + +K  D     T  +  + ++
Sbjct: 151 ASKKFVHRDLAARNCMLDEK-----FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 205
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           A E L+    TTK DV+SFGV+L E++
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELM 232

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 16/207 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKN 548
           F++++G G  G VY G L   D  +I  AVK L +  DI + ++ F+TE  I+    H N
Sbjct: 31  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPN 89
Query: 549 LVRLLGFC-SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           ++ LLG C   E   L+V   M +G L NF+ +E   P     +   L VA+G+ YL   
Sbjct: 90  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 146
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT---MGYV 664
              + +H D+  +N +LD K     +  K++DFG+++ +   +  +  N  G    + ++
Sbjct: 147 ASKKFVHRDLAARNCMLDEK-----FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 201
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           A E L+    TTK DV+SFGV+L E++
Sbjct: 202 ALESLQTQKFTTKSDVWSFGVLLWELM 228

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 111/207 (53%), Gaps = 16/207 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKN 548
           F++++G G  G VY G L   D  +I  AVK L +  DI + ++ F+TE  I+    H N
Sbjct: 32  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQ-FLTEGIIMKDFSHPN 90
Query: 549 LVRLLGFC-SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           ++ LLG C   E   L+V   M +G L NF+ +E   P     +   L VA+G+ +L   
Sbjct: 91  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 147
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNK--DQTRTDTNMRGTMGYV 664
              + +H D+  +N +LD K     +  K++DFG+++ + +K  D     T  +  + ++
Sbjct: 148 ASKKFVHRDLAARNCMLDEK-----FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 202
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEII 691
           A E L+    TTK DV+SFGV+L E++
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELM 229

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 115/211 (54%), Gaps = 13/211 (6%)
Query: 485 LQEATKGFSKLVGTGSSGKVYRGIL--RLKDTQIEIAVKKL-EKDIEKTNEEFMTELKII 541
           L+E      K++G+G+ G VY+GI     +  +I +A+K L E    K N EFM E  I+
Sbjct: 35  LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 94
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
               H +LVRLLG C     + LV +LMP+G L  ++       G    +   + +A+G+
Sbjct: 95  ASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGM 153
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGT 660
           +YL E    +++H D+  +NVL+       N++ KI+DFG+++LL  D+   + +  +  
Sbjct: 154 MYLEER---RLVHRDLAARNVLVK----SPNHV-KITDFGLARLLEGDEKEYNADGGKMP 205
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++A E +     T + DV+S+GV + E++
Sbjct: 206 IKWMALECIHYRKFTHQSDVWSYGVTIWELM 236

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 115/211 (54%), Gaps = 13/211 (6%)
Query: 485 LQEATKGFSKLVGTGSSGKVYRGIL--RLKDTQIEIAVKKL-EKDIEKTNEEFMTELKII 541
           L+E      K++G+G+ G VY+GI     +  +I +A+K L E    K N EFM E  I+
Sbjct: 12  LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 71
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
               H +LVRLLG C     + LV +LMP+G L  ++       G    +   + +A+G+
Sbjct: 72  ASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGM 130
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGT 660
           +YL E    +++H D+  +NVL+       N++ KI+DFG+++LL  D+   + +  +  
Sbjct: 131 MYLEER---RLVHRDLAARNVLVK----SPNHV-KITDFGLARLLEGDEKEYNADGGKMP 182
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++A E +     T + DV+S+GV + E++
Sbjct: 183 IKWMALECIHYRKFTHQSDVWSYGVTIWELM 213

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F K +GTG  G V  G  R    Q ++A+K + K+   + +EF+ E K++    H+ LV+
Sbjct: 28  FLKELGTGQFGVVKYGKWR---GQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L G C+++    ++ E M NG L N+L     R    Q +E+   V   + YL  +   Q
Sbjct: 84  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---Q 140
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
            +H D+  +N L++ + +      K+SDFG+S+ +  D+  +    +  + +  PE L  
Sbjct: 141 FLHRDLAARNCLVNDQGV-----VKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMY 195
Query: 672 VPVTTKVDVFSFGVMLLEI 690
              ++K D+++FGV++ EI
Sbjct: 196 SKFSSKSDIWAFGVLMWEI 214

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 37/222 (16%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNE-EFMTELKIIGRT-HHKNL 549
           F  ++G G+ G+V +  ++    +++ A+K++++   K +  +F  EL+++ +  HH N+
Sbjct: 19  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHE---GQRPGWV------------QRVEIA 594
           + LLG C       L  E  P+G L +FL         P +             Q +  A
Sbjct: 79  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 595 LGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD 654
             VARG+ YL ++   Q IH D+  +N+L     +  NY+AKI+DFG+S+         +
Sbjct: 139 ADVARGMDYLSQK---QFIHRDLAARNIL-----VGENYVAKIADFGLSR-------GQE 183
Query: 655 TNMRGTMGYVAPEWLR----NVPV-TTKVDVFSFGVMLLEII 691
             ++ TMG +   W+     N  V TT  DV+S+GV+L EI+
Sbjct: 184 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 225

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F K +GTG  G V  G  R    Q ++A+K + K+   + +EF+ E K++    H+ LV+
Sbjct: 28  FLKELGTGQFGVVKYGKWR---GQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L G C+++    ++ E M NG L N+L     R    Q +E+   V   + YL  +   Q
Sbjct: 84  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---Q 140
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
            +H D+  +N L++ + +      K+SDFG+S+ +  D+  +    +  + +  PE L  
Sbjct: 141 FLHRDLAARNCLVNDQGV-----VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 195
Query: 672 VPVTTKVDVFSFGVMLLEI 690
              ++K D+++FGV++ EI
Sbjct: 196 SKFSSKSDIWAFGVLMWEI 214

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 37/222 (16%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRT-HHKNL 549
           F  ++G G+ G+V +  ++    +++ A+K++++   K +  +F  EL+++ +  HH N+
Sbjct: 29  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHE---GQRPGWV------------QRVEIA 594
           + LLG C       L  E  P+G L +FL         P +             Q +  A
Sbjct: 89  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 595 LGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD 654
             VARG+ YL ++   Q IH D+  +N+L     +  NY+AKI+DFG+S+         +
Sbjct: 149 ADVARGMDYLSQK---QFIHRDLAARNIL-----VGENYVAKIADFGLSR-------GQE 193
Query: 655 TNMRGTMGYVAPEWLR----NVPV-TTKVDVFSFGVMLLEII 691
             ++ TMG +   W+     N  V TT  DV+S+GV+L EI+
Sbjct: 194 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F K +GTG  G V  G  R    Q ++A+K + K+   + +EF+ E K++    H+ LV+
Sbjct: 19  FLKELGTGQFGVVKYGKWR---GQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQ 74
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L G C+++    ++ E M NG L N+L     R    Q +E+   V   + YL  +   Q
Sbjct: 75  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---Q 131
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
            +H D+  +N L++ + +      K+SDFG+S+ +  D+  +    +  + +  PE L  
Sbjct: 132 FLHRDLAARNCLVNDQGV-----VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 186
Query: 672 VPVTTKVDVFSFGVMLLEI 690
              ++K D+++FGV++ EI
Sbjct: 187 SKFSSKSDIWAFGVLMWEI 205

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F K +GTG  G V  G  R    Q ++A+K + K+   + +EF+ E K++    H+ LV+
Sbjct: 12  FLKELGTGQFGVVKYGKWR---GQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQ 67
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L G C+++    ++ E M NG L N+L     R    Q +E+   V   + YL  +   Q
Sbjct: 68  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---Q 124
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
            +H D+  +N L++ + +      K+SDFG+S+ +  D+  +    +  + +  PE L  
Sbjct: 125 FLHRDLAARNCLVNDQGV-----VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 179
Query: 672 VPVTTKVDVFSFGVMLLEI 690
              ++K D+++FGV++ EI
Sbjct: 180 SKFSSKSDIWAFGVLMWEI 198

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F K +GTG  G V  G  R    Q ++A+K + K+   + +EF+ E K++    H+ LV+
Sbjct: 13  FLKELGTGQFGVVKYGKWR---GQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L G C+++    ++ E M NG L N+L     R    Q +E+   V   + YL  +   Q
Sbjct: 69  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---Q 125
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
            +H D+  +N L++ + +      K+SDFG+S+ +  D+  +    +  + +  PE L  
Sbjct: 126 FLHRDLAARNCLVNDQGV-----VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 180
Query: 672 VPVTTKVDVFSFGVMLLEI 690
              ++K D+++FGV++ EI
Sbjct: 181 SKFSSKSDIWAFGVLMWEI 199

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 119/241 (49%), Gaps = 29/241 (12%)
Query: 467 YFDPNSMEINFR-EFTFQELQEATKGFSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKK 522
           + DP  +  N + EF    LQ     F K +G G+ GKV       L  +D  +++AVK 
Sbjct: 21  FIDPTQLPYNEKWEFPRNNLQ-----FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKM 75
Query: 523 LEKDIEKTNEE-FMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFH 580
           L+       +E  M+ELKI+     H+N+V LLG C+     L++ E    G L NFL  
Sbjct: 76  LKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRR 135
Query: 581 EGQ--------RPGWVQR-VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDT 631
           + +        RP  ++  +  +  VA+G+ +L        IH D+  +NVL     L  
Sbjct: 136 KAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVL-----LTN 187
Query: 632 NYMAKISDFGISK-LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
            ++AKI DFG+++ ++N        N R  + ++APE + +   T + DV+S+G++L EI
Sbjct: 188 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
Query: 691 I 691
Sbjct: 248 F 248

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 12/208 (5%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           EL+       K +G+G  G V  G  +    Q ++AVK + K+   + +EF  E + + +
Sbjct: 4   ELKREEITLLKELGSGQFGVVKLGKWK---GQYDVAVKMI-KEGSMSEDEFFQEAQTMMK 59
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLY 603
             H  LV+  G CS+E    +V E + NG L N+L   G+     Q +E+   V  G+ +
Sbjct: 60  LSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAF 119
Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           L      Q IH D+  +N L     +D +   K+SDFG+++ +  DQ  +    +  + +
Sbjct: 120 LESH---QFIHRDLAARNCL-----VDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKW 171
Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            APE       ++K DV++FG+++ E+ 
Sbjct: 172 SAPEVFHYFKYSSKSDVWAFGILMWEVF 199

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F K +GTG  G V  G  R    Q ++A+K + K+   + +EF+ E K++    H+ LV+
Sbjct: 8   FLKELGTGQFGVVKYGKWR---GQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQ 63
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L G C+++    ++ E M NG L N+L     R    Q +E+   V   + YL  +   Q
Sbjct: 64  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---Q 120
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
            +H D+  +N L++ + +      K+SDFG+S+ +  D+  +    +  + +  PE L  
Sbjct: 121 FLHRDLAARNCLVNDQGV-----VKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 175
Query: 672 VPVTTKVDVFSFGVMLLEI 690
              ++K D+++FGV++ EI
Sbjct: 176 SKFSSKSDIWAFGVLMWEI 194

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F K +GTG  G V  G  R    Q ++A+K + K+   + +EF+ E K++    H+ LV+
Sbjct: 13  FLKELGTGQFGVVKYGKWR---GQYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L G C+++    ++ E M NG L N+L     R    Q +E+   V   + YL  +   Q
Sbjct: 69  LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---Q 125
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
            +H D+  +N L++ + +      K+SDFG+S+ +  D+  +    +  + +  PE L  
Sbjct: 126 FLHRDLAARNCLVNDQGV-----VKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMY 180
Query: 672 VPVTTKVDVFSFGVMLLEI 690
              ++K D+++FGV++ EI
Sbjct: 181 SKFSSKSDIWAFGVLMWEI 199

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 119/241 (49%), Gaps = 29/241 (12%)
Query: 467 YFDPNSMEINFR-EFTFQELQEATKGFSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKK 522
           + DP  +  N + EF    LQ     F K +G G+ GKV       L  +D  +++AVK 
Sbjct: 29  FIDPTQLPYNEKWEFPRNNLQ-----FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKM 83
Query: 523 LEKDIEKTNEE-FMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFH 580
           L+       +E  M+ELKI+     H+N+V LLG C+     L++ E    G L NFL  
Sbjct: 84  LKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRR 143
Query: 581 EGQ--------RPGWVQR-VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDT 631
           + +        RP  ++  +  +  VA+G+ +L        IH D+  +NVL     L  
Sbjct: 144 KAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVL-----LTN 195
Query: 632 NYMAKISDFGISK-LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
            ++AKI DFG+++ ++N        N R  + ++APE + +   T + DV+S+G++L EI
Sbjct: 196 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255
Query: 691 I 691
Sbjct: 256 F 256

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 85.9 bits (211), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 117/246 (47%), Gaps = 35/246 (14%)
Query: 467 YFDPNSMEINFR-EFTFQELQEATKGFSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKK 522
           + DP  +  N + EF    LQ     F K +G G+ GKV       L  +D  +++AVK 
Sbjct: 29  FIDPTQLPYNEKWEFPRNNLQ-----FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKM 83
Query: 523 LEKDIEKTNEE-FMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFH 580
           L+       +E  M+ELKI+     H+N+V LLG C+     L++ E    G L NFL  
Sbjct: 84  LKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL-- 141
Query: 581 EGQRPGWVQRVEIALGVA------RGLLYLHEECETQI--------IHCDIKPQNVLLDL 626
             +R   V   + A  +A      R LL+   +    +        IH D+  +NVL   
Sbjct: 142 --RRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL--- 196
Query: 627 KTLDTNYMAKISDFGISK-LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGV 685
             L   ++AKI DFG+++ ++N        N R  + ++APE + +   T + DV+S+G+
Sbjct: 197 --LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 686 MLLEII 691
           +L EI 
Sbjct: 255 LLWEIF 260

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 85.9 bits (211), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 117/246 (47%), Gaps = 35/246 (14%)
Query: 467 YFDPNSMEINFR-EFTFQELQEATKGFSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKK 522
           + DP  +  N + EF    LQ     F K +G G+ GKV       L  +D  +++AVK 
Sbjct: 29  FIDPTQLPYNEKWEFPRNNLQ-----FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKM 83
Query: 523 LEKDIEKTNEE-FMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFH 580
           L+       +E  M+ELKI+     H+N+V LLG C+     L++ E    G L NFL  
Sbjct: 84  LKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL-- 141
Query: 581 EGQRPGWVQRVEIALGVA------RGLLYLHEECETQI--------IHCDIKPQNVLLDL 626
             +R   V   + A  +A      R LL+   +    +        IH D+  +NVL   
Sbjct: 142 --RRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL--- 196
Query: 627 KTLDTNYMAKISDFGISK-LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGV 685
             L   ++AKI DFG+++ ++N        N R  + ++APE + +   T + DV+S+G+
Sbjct: 197 --LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 686 MLLEII 691
           +L EI 
Sbjct: 255 LLWEIF 260

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 37/222 (16%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRT-HHKNL 549
           F  ++G G+ G+V +  ++    +++ A+K++++   K +  +F  EL+++ +  HH N+
Sbjct: 26  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHE---GQRPGWV------------QRVEIA 594
           + LLG C       L  E  P+G L +FL         P +             Q +  A
Sbjct: 86  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 595 LGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD 654
             VARG+ YL ++   Q IH ++  +N+L     +  NY+AKI+DFG+S+         +
Sbjct: 146 ADVARGMDYLSQK---QFIHRNLAARNIL-----VGENYVAKIADFGLSR-------GQE 190
Query: 655 TNMRGTMGYVAPEWLR----NVPV-TTKVDVFSFGVMLLEII 691
             ++ TMG +   W+     N  V TT  DV+S+GV+L EI+
Sbjct: 191 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 232

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 42/254 (16%)
Query: 467 YFDPNSMEINFR-EFTFQELQEATKGFSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKK 522
           + DP  +  N + EF    LQ     F K +G G+ GKV       L  +D  +++AVK 
Sbjct: 14  FIDPTQLPYNEKWEFPRNNLQ-----FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKM 68
Query: 523 LEKDIEKTNEE-FMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-- 578
           L+       +E  M+ELKI+     H+N+V LLG C+     L++ E    G L NFL  
Sbjct: 69  LKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRR 128
Query: 579 ---------FHEGQRPGWVQR-----------VEIALGVARGLLYLHEECETQIIHCDIK 618
                       GQ P  + +           +  +  VA+G+ +L        IH D+ 
Sbjct: 129 KAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVA 185
Query: 619 PQNVLLDLKTLDTNYMAKISDFGISK-LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTK 677
            +NVL     L   ++AKI DFG+++ ++N        N R  + ++APE + +   T +
Sbjct: 186 ARNVL-----LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 240
Query: 678 VDVFSFGVMLLEII 691
            DV+S+G++L EI 
Sbjct: 241 SDVWSYGILLWEIF 254

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 118/249 (47%), Gaps = 39/249 (15%)
Query: 467 YFDPNSMEINFR-EFTFQELQEATKGFSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKK 522
           + DP  +  N + EF    LQ     F K +G G+ GKV       L  +D  +++AVK 
Sbjct: 29  FIDPTQLPYNEKWEFPRNNLQ-----FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKM 83
Query: 523 LEKDIEKTNEE-FMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFH 580
           L+       +E  M+ELKI+     H+N+V LLG C+     L++ E    G L NFL  
Sbjct: 84  LKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL-- 141
Query: 581 EGQRPGWVQR-----------------VEIALGVARGLLYLHEECETQIIHCDIKPQNVL 623
             +RP  ++                  +  +  VA+G+ +L        IH D+  +NVL
Sbjct: 142 RRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVL 198
Query: 624 LDLKTLDTNYMAKISDFGISK-LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFS 682
                L   ++AKI DFG+++ ++N        N R  + ++APE + +   T + DV+S
Sbjct: 199 -----LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 253
Query: 683 FGVMLLEII 691
           +G++L EI 
Sbjct: 254 YGILLWEIF 262

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS+G V   I   K T  ++AVKK++   ++  E    E+ I+   HH N+V +   
Sbjct: 53  IGEGSTGIV--CIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSS 110
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               D+  +V E +  G L++ + H   R    Q   + L V R L YLH +    +IH 
Sbjct: 111 YLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQG---VIHR 165
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  ++LL      ++   K+SDFG    ++K+  +    + GT  ++APE +  +P  
Sbjct: 166 DIKSDSILLT-----SDGRIKLSDFGFCAQVSKEVPKRKX-LVGTPYWMAPEVISRLPYG 219
Query: 676 TKVDVFSFGVMLLEIICG 693
           T+VD++S G+M++E+I G
Sbjct: 220 TEVDIWSLGIMVIEMIDG 237

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 142/305 (46%), Gaps = 23/305 (7%)
Query: 395 RKSASTKGMKAIIKVPTKMSNPSNHEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAI-Y 453
           R+S +TKG   +      +S+  N +G    ++  R L   GF  ++     S    + Y
Sbjct: 94  RESETTKGAYCL-----SVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAY 148
Query: 454 YSPAARGLIKRRNYFDPNS--MEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL 511
           YS  A GL  R     P S        +  ++  +E+ +   KL G G  G+V+ G    
Sbjct: 149 YSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKL-GQGCFGEVWMGTW-- 205
Query: 512 KDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPN 571
            +    +A+K L K    + E F+ E +++ +  H+ LV+L    SEE    +V E M  
Sbjct: 206 -NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSK 262
Query: 572 GTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD 630
           G+L +FL  E G+     Q V++A  +A G+ Y+        +H D++  N+L+      
Sbjct: 263 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVG----- 314
Query: 631 TNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
            N + K++DFG+++L+  ++       +  + + APE       T K DV+SFG++L E+
Sbjct: 315 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 691 ICGRR 695
               R
Sbjct: 375 TTKGR 379

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 144/310 (46%), Gaps = 33/310 (10%)
Query: 395 RKSASTKGMKAIIKVPTKMSNPSNHEGKKKNNFNSRLLLKIGFI------FSAICALLSG 448
           R+S +TKG   +      +S+  N +G    ++  R L   GF       FS++  L++ 
Sbjct: 95  RESETTKGAYCL-----SVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQLVA- 148
Query: 449 VAAIYYSPAARGLIKRRNYFDPNS--MEINFREFTFQELQEATKGFSKLVGTGSSGKVYR 506
               YYS  A GL  R     P S        +  ++  +E+ +   KL G G  G+V+ 
Sbjct: 149 ----YYSKHADGLCHRLTNVCPTSKPQTQGLAKDAWEIPRESLRLEVKL-GQGCFGEVWM 203
Query: 507 GILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY 566
           G     +    +A+K L K    + E F+ E +++ +  H+ LV+L    SEE    +V 
Sbjct: 204 GTW---NGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVT 258
Query: 567 ELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLD 625
           E M  G+L +FL  E G+     Q V++A  +A G+ Y+        +H D++  N+L+ 
Sbjct: 259 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVG 315
Query: 626 LKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGV 685
                 N + K++DFG+ +L+  ++       +  + + APE       T K DV+SFG+
Sbjct: 316 -----ENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 370
Query: 686 MLLEIICGRR 695
           +L E+    R
Sbjct: 371 LLTELTTKGR 380

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 142/305 (46%), Gaps = 23/305 (7%)
Query: 395 RKSASTKGMKAIIKVPTKMSNPSNHEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAI-Y 453
           R+S +TKG   +      +S+  N +G    ++  R L   GF  ++     S    + Y
Sbjct: 94  RESETTKGAYCL-----SVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAY 148
Query: 454 YSPAARGLIKRRNYFDPNS--MEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL 511
           YS  A GL  R     P S        +  ++  +E+ +   KL G G  G+V+ G    
Sbjct: 149 YSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKL-GQGCFGEVWMGTW-- 205
Query: 512 KDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPN 571
            +    +A+K L K    + E F+ E +++ +  H+ LV+L    SEE    +V E M  
Sbjct: 206 -NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSK 262
Query: 572 GTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD 630
           G+L +FL  E G+     Q V++A  +A G+ Y+        +H D++  N+L+      
Sbjct: 263 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVG----- 314
Query: 631 TNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
            N + K++DFG+++L+  ++       +  + + APE       T K DV+SFG++L E+
Sbjct: 315 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 691 ICGRR 695
               R
Sbjct: 375 TTKGR 379

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 496 VGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTNE-EFMTELKIIGRTHHKNLVR 551
           +G G+ G+VY G    +    + +++AVK L +   + +E +F+ E  II + +H+N+VR
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP------GWVQRVEIALGVARGLLYLH 605
            +G   +   R ++ ELM  G L +FL     RP        +  + +A  +A G  YL 
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG-----T 660
              E   IH DI  +N LL         +AKI DFG++    +D  R     +G      
Sbjct: 173 ---ENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLP 223
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++ PE       T+K D +SFGV+L EI 
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-NEEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G+V+ G LR  +T +  AVK   + +      +F+ E +I+ +  H N+VRL+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLV--AVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 555 FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            C+++    +V EL+  G    FL  EG R      +++    A G+ YL  +C    IH
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIH 236
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT-MGYVAPEWLRNVP 673
            D+  +N L+  K      + KISDFG+S+            +R   + + APE L    
Sbjct: 237 RDLAARNCLVTEKN-----VLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 674 VTTKVDVFSFGVMLLE 689
            +++ DV+SFG++L E
Sbjct: 292 YSSESDVWSFGILLWE 307

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 496 VGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTNE-EFMTELKIIGRTHHKNLVR 551
           +G G+ G+VY G    +    + +++AVK L +   + +E +F+ E  II + +H+N+VR
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP------GWVQRVEIALGVARGLLYLH 605
            +G   +   R ++ ELM  G L +FL     RP        +  + +A  +A G  YL 
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG-----T 660
              E   IH DI  +N LL         +AKI DFG++    +D  R     +G      
Sbjct: 159 ---ENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLP 209
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++ PE       T+K D +SFGV+L EI 
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 496 VGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTNE-EFMTELKIIGRTHHKNLVR 551
           +G G+ G+VY G    +    + +++AVK L +   + +E +F+ E  II + +H+N+VR
Sbjct: 30  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP------GWVQRVEIALGVARGLLYLH 605
            +G   +   R ++ ELM  G L +FL     RP        +  + +A  +A G  YL 
Sbjct: 90  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG-----T 660
              E   IH DI  +N LL         +AKI DFG++    +D  R     +G      
Sbjct: 150 ---ENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLP 200
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++ PE       T+K D +SFGV+L EI 
Sbjct: 201 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 231

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 496 VGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTNE-EFMTELKIIGRTHHKNLVR 551
           +G G+ G+VY G    +    + +++AVK L +   + +E +F+ E  II + +H+N+VR
Sbjct: 38  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP------GWVQRVEIALGVARGLLYLH 605
            +G   +   R ++ ELM  G L +FL     RP        +  + +A  +A G  YL 
Sbjct: 98  CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG-----T 660
              E   IH DI  +N LL         +AKI DFG++    +D  R     +G      
Sbjct: 158 ---ENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLP 208
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++ PE       T+K D +SFGV+L EI 
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 496 VGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTNE-EFMTELKIIGRTHHKNLVR 551
           +G G+ G+VY G    +    + +++AVK L +   + +E +F+ E  II + +H+N+VR
Sbjct: 38  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP------GWVQRVEIALGVARGLLYLH 605
            +G   +   R ++ ELM  G L +FL     RP        +  + +A  +A G  YL 
Sbjct: 98  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG-----T 660
              E   IH DI  +N LL         +AKI DFG++    +D  R     +G      
Sbjct: 158 ---ENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLP 208
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++ PE       T+K D +SFGV+L EI 
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 142/305 (46%), Gaps = 23/305 (7%)
Query: 395 RKSASTKGMKAIIKVPTKMSNPSNHEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAI-Y 453
           R+S +TKG   +      +S+  N +G    ++  R L   GF  ++     S    + Y
Sbjct: 177 RESETTKGAYCL-----SVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAY 231
Query: 454 YSPAARGLIKRRNYFDPNS--MEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL 511
           YS  A GL  R     P S        +  ++  +E+ +   KL G G  G+V+ G    
Sbjct: 232 YSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKL-GQGCFGEVWMGTW-- 288
Query: 512 KDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPN 571
            +    +A+K L K    + E F+ E +++ +  H+ LV+L    SEE    +V E M  
Sbjct: 289 -NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSK 345
Query: 572 GTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD 630
           G+L +FL  E G+     Q V++A  +A G+ Y+        +H D++  N+L+      
Sbjct: 346 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVG----- 397
Query: 631 TNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
            N + K++DFG+++L+  ++       +  + + APE       T K DV+SFG++L E+
Sbjct: 398 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 457
Query: 691 ICGRR 695
               R
Sbjct: 458 TTKGR 462

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 496 VGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTNE-EFMTELKIIGRTHHKNLVR 551
           +G G+ G+VY G    +    + +++AVK L +   + +E +F+ E  II + +H+N+VR
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP------GWVQRVEIALGVARGLLYLH 605
            +G   +   R ++ ELM  G L +FL     RP        +  + +A  +A G  YL 
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG-----T 660
              E   IH DI  +N LL         +AKI DFG++    +D  R     +G      
Sbjct: 173 ---ENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLP 223
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++ PE       T+K D +SFGV+L EI 
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 496 VGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTNE-EFMTELKIIGRTHHKNLVR 551
           +G G+ G+VY G    +    + +++AVK L +   + +E +F+ E  II + +H+N+VR
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP------GWVQRVEIALGVARGLLYLH 605
            +G   +   R ++ ELM  G L +FL     RP        +  + +A  +A G  YL 
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG-----T 660
              E   IH DI  +N LL         +AKI DFG++    +D  R     +G      
Sbjct: 159 ---ENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLP 209
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++ PE       T+K D +SFGV+L EI 
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 142/305 (46%), Gaps = 23/305 (7%)
Query: 395 RKSASTKGMKAIIKVPTKMSNPSNHEGKKKNNFNSRLLLKIGFIFSAICALLSGVAAI-Y 453
           R+S +TKG   +      +S+  N +G    ++  R L   GF  ++     S    + Y
Sbjct: 94  RESETTKGAYCL-----SVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAY 148
Query: 454 YSPAARGLIKRRNYFDPNS--MEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL 511
           YS  A GL  R     P S        +  ++  +E+ +   KL G G  G+V+ G    
Sbjct: 149 YSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKL-GQGCFGEVWMGTW-- 205
Query: 512 KDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPN 571
            +    +A+K L K    + E F+ E +++ +  H+ LV+L    SEE    +V E M  
Sbjct: 206 -NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVGEYMSK 262
Query: 572 GTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD 630
           G+L +FL  E G+     Q V++A  +A G+ Y+        +H D++  N+L+      
Sbjct: 263 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVG----- 314
Query: 631 TNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
            N + K++DFG+++L+  ++       +  + + APE       T K DV+SFG++L E+
Sbjct: 315 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 691 ICGRR 695
               R
Sbjct: 375 TTKGR 379

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 24/209 (11%)
Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLG 554
           ++G G+ G VY G  R    Q+ IA+K++ +   + ++    E+ +     HKN+V+ LG
Sbjct: 15  VLGKGTYGIVYAG--RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 72
Query: 555 FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGW--VQRVEIALG-----VARGLLYLHEE 607
             SE     +  E +P G+LS  L     R  W  ++  E  +G     +  GL YLH  
Sbjct: 73  SFSENGFIKIFMEQVPGGSLSALL-----RSKWGPLKDNEQTIGFYTKQILEGLKYLH-- 125
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
            + QI+H DIK  NVL++  +     + KISDFG SK L      T+T   GT+ Y+APE
Sbjct: 126 -DNQIVHRDIKGDNVLINTYS----GVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPE 179
Query: 668 WLRNVP--VTTKVDVFSFGVMLLEIICGR 694
            +   P       D++S G  ++E+  G+
Sbjct: 180 IIDKGPRGYGKAADIWSLGCTIIEMATGK 208

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 496 VGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTNE-EFMTELKIIGRTHHKNLVR 551
           +G G+ G+VY G    +    + +++AVK L +   + +E +F+ E  II + +H+N+VR
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP------GWVQRVEIALGVARGLLYLH 605
            +G   +   R ++ ELM  G L +FL     RP        +  + +A  +A G  YL 
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG-----T 660
              E   IH DI  +N LL         +AKI DFG++    +D  R     +G      
Sbjct: 173 ---ENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLP 223
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++ PE       T+K D +SFGV+L EI 
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 254

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-NEEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G+V+ G LR  +T +  AVK   + +      +F+ E +I+ +  H N+VRL+G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLV--AVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 555 FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            C+++    +V EL+  G    FL  EG R      +++    A G+ YL  +C    IH
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIH 236
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT-MGYVAPEWLRNVP 673
            D+  +N L+  K      + KISDFG+S+            +R   + + APE L    
Sbjct: 237 RDLAARNCLVTEKN-----VLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 674 VTTKVDVFSFGVMLLE 689
            +++ DV+SFG++L E
Sbjct: 292 YSSESDVWSFGILLWE 307

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 28/215 (13%)
Query: 496 VGTGSSGKVY----RGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           +G G+ GKV+      +L  +D  + +AVK L++  E   ++F  E +++    H+++VR
Sbjct: 49  LGEGAFGKVFLAECHNLLPEQDKML-VAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQ-----------RPGWV---QRVEIALGV 597
             G C+E    L+V+E M +G L+ FL   G             PG +   Q + +A  V
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNKDQTRTDTN 656
           A G++YL        +H D+  +N L     +    + KI DFG+S+ + + D  R    
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCL-----VGQGLVVKIGDFGMSRDIYSTDYYRVGGR 219
Query: 657 MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
               + ++ PE +     TT+ DV+SFGV+L EI 
Sbjct: 220 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 23/211 (10%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +++G G  G+  +   R  +T   + +K+L +  E+T   F+ E+K++    H N+++ +
Sbjct: 16  EVLGKGCFGQAIKVTHR--ETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
           G   ++ +   + E +  GTL   +     +  W QRV  A  +A G+ YLH      II
Sbjct: 74  GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNII 130
Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT---------RTDTNMR----GT 660
           H D+   N L     +  N    ++DFG+++L+  ++T         + D   R    G 
Sbjct: 131 HRDLNSHNCL-----VRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
             ++APE +       KVDVFSFG++L EII
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 24/209 (11%)
Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLG 554
           ++G G+ G VY G  R    Q+ IA+K++ +   + ++    E+ +     HKN+V+ LG
Sbjct: 29  VLGKGTYGIVYAG--RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 86
Query: 555 FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGW--VQRVEIALG-----VARGLLYLHEE 607
             SE     +  E +P G+LS  L     R  W  ++  E  +G     +  GL YLH  
Sbjct: 87  SFSENGFIKIFMEQVPGGSLSALL-----RSKWGPLKDNEQTIGFYTKQILEGLKYLH-- 139
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
            + QI+H DIK  NVL++      + + KISDFG SK L      T+T   GT+ Y+APE
Sbjct: 140 -DNQIVHRDIKGDNVLINT----YSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPE 193
Query: 668 WLRNVP--VTTKVDVFSFGVMLLEIICGR 694
            +   P       D++S G  ++E+  G+
Sbjct: 194 IIDKGPRGYGKAADIWSLGCTIIEMATGK 222

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 496 VGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTNE-EFMTELKIIGRTHHKNLVR 551
           +G G+ G+VY G    +    + +++AVK L +   + +E +F+ E  II + +H+N+VR
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP------GWVQRVEIALGVARGLLYLH 605
            +G   +   R ++ ELM  G L +FL     RP        +  + +A  +A G  YL 
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG-----T 660
              E   IH DI  +N LL         +AKI DFG++    +D  R     +G      
Sbjct: 159 ---ENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMA----QDIYRASYYRKGGCAMLP 209
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++ PE       T+K D +SFGV+L EI 
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT--NEEFMTELKIIGRTHHKNLVR 551
           K +G+G+ G+V   + R K T +E A+K + K    T  N + + E+ ++    H N+++
Sbjct: 43  KKLGSGAYGEVL--LCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMK 100
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L  F  ++    LV E    G L + + H   +   V    I   V  G+ YLH+     
Sbjct: 101 LYDFFEDKRNYYLVMECYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLHKH---N 156
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           I+H D+KP+N+LL+ K  D   + KI DFG+S +  ++Q +    + GT  Y+APE LR 
Sbjct: 157 IVHRDLKPENLLLESKEKDA--LIKIVDFGLSAVF-ENQKKMKERL-GTAYYIAPEVLRK 212
Query: 672 VPVTTKVDVFSFGVMLLEIICG 693
                K DV+S GV+L  ++ G
Sbjct: 213 -KYDEKCDVWSIGVILFILLAG 233

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 496 VGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTNE-EFMTELKIIGRTHHKNLVR 551
           +G G+ G+VY G    +    + +++AVK L +   + +E +F+ E  II + +H+N+VR
Sbjct: 45  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP------GWVQRVEIALGVARGLLYLH 605
            +G   +   R ++ ELM  G L +FL     RP        +  + +A  +A G  YL 
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG-----T 660
              E   IH DI  +N LL         +AKI DFG++    +D  R     +G      
Sbjct: 165 ---ENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLP 215
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++ PE       T+K D +SFGV+L EI 
Sbjct: 216 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 246

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 496 VGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTNE-EFMTELKIIGRTHHKNLVR 551
           +G G+ G+VY G    +    + +++AVK L +   + +E +F+ E  II + +H+N+VR
Sbjct: 56  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP------GWVQRVEIALGVARGLLYLH 605
            +G   +   R ++ ELM  G L +FL     RP        +  + +A  +A G  YL 
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG-----T 660
              E   IH DI  +N LL         +AKI DFG++    +D  R     +G      
Sbjct: 176 ---ENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMA----RDIYRAGYYRKGGCAMLP 226
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++ PE       T+K D +SFGV+L EI 
Sbjct: 227 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 257

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 496 VGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTNE-EFMTELKIIGRTHHKNLVR 551
           +G G+ G+VY G    +    + +++AVK L +   + +E +F+ E  II + +H+N+VR
Sbjct: 79  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP------GWVQRVEIALGVARGLLYLH 605
            +G   +   R ++ ELM  G L +FL     RP        +  + +A  +A G  YL 
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG-----T 660
              E   IH DI  +N LL         +AKI DFG++    +D  R     +G      
Sbjct: 199 ---ENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMA----RDIYRAGYYRKGGCAMLP 249
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++ PE       T+K D +SFGV+L EI 
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 280

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 496 VGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTNE-EFMTELKIIGRTHHKNLVR 551
           +G G+ G+VY G    +    + +++AVK L +   + +E +F+ E  II + +H+N+VR
Sbjct: 55  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP------GWVQRVEIALGVARGLLYLH 605
            +G   +   R ++ ELM  G L +FL     RP        +  + +A  +A G  YL 
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG-----T 660
              E   IH DI  +N LL         +AKI DFG++    +D  R     +G      
Sbjct: 175 ---ENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLP 225
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++ PE       T+K D +SFGV+L EI 
Sbjct: 226 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 256

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 28/215 (13%)
Query: 496 VGTGSSGKVY----RGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           +G G+ GKV+      +L  +D  + +AVK L++  E   ++F  E +++    H+++VR
Sbjct: 20  LGEGAFGKVFLAECHNLLPEQDKML-VAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQ-----------RPGWV---QRVEIALGV 597
             G C+E    L+V+E M +G L+ FL   G             PG +   Q + +A  V
Sbjct: 79  FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNKDQTRTDTN 656
           A G++YL        +H D+  +N L     +    + KI DFG+S+ + + D  R    
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCL-----VGQGLVVKIGDFGMSRDIYSTDYYRVGGR 190
Query: 657 MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
               + ++ PE +     TT+ DV+SFGV+L EI 
Sbjct: 191 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 225

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 28/215 (13%)
Query: 496 VGTGSSGKVY----RGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           +G G+ GKV+      +L  +D  + +AVK L++  E   ++F  E +++    H+++VR
Sbjct: 26  LGEGAFGKVFLAECHNLLPEQDKML-VAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQ-----------RPGWV---QRVEIALGV 597
             G C+E    L+V+E M +G L+ FL   G             PG +   Q + +A  V
Sbjct: 85  FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNKDQTRTDTN 656
           A G++YL        +H D+  +N L     +    + KI DFG+S+ + + D  R    
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCL-----VGQGLVVKIGDFGMSRDIYSTDYYRVGGR 196
Query: 657 MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
               + ++ PE +     TT+ DV+SFGV+L EI 
Sbjct: 197 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 231

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 110/225 (48%), Gaps = 24/225 (10%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTNEEFMTELK 539
           Q ++       + +G G+ GKV+      L  +  +I +AVK L+   +   ++F  E +
Sbjct: 8   QHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAE 67
Query: 540 IIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNF---------LFHEGQRPGWV-- 588
           ++    H+++V+  G C E D  ++V+E M +G L+ F         L  EG  P  +  
Sbjct: 68  LLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQ 127
Query: 589 -QRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LL 646
            Q + IA  +A G++YL  +     +H D+  +N L     +  N + KI DFG+S+ + 
Sbjct: 128 SQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCL-----VGENLLVKIGDFGMSRDVY 179
Query: 647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + D  R   +    + ++ PE +     TT+ DV+S GV+L EI 
Sbjct: 180 STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIF 224

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 496 VGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTNE-EFMTELKIIGRTHHKNLVR 551
           +G G+ G+VY G    +    + +++AVK L +   + +E +F+ E  II + +H+N+VR
Sbjct: 65  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP------GWVQRVEIALGVARGLLYLH 605
            +G   +   R ++ ELM  G L +FL     RP        +  + +A  +A G  YL 
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG-----T 660
              E   IH DI  +N LL         +AKI DFG++    +D  R     +G      
Sbjct: 185 ---ENHFIHRDIAARNCLLTCP--GPGRVAKIGDFGMA----RDIYRASYYRKGGCAMLP 235
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++ PE       T+K D +SFGV+L EI 
Sbjct: 236 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 266

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 20/197 (10%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G V  G  R      ++AVK ++ D   T + F+ E  ++ +  H NLV+LLG 
Sbjct: 20  IGKGEFGDVMLGDYRGN----KVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGV 73
Query: 556 CSEEDKRL-LVYELMPNGTLSNFLFHEGQRP-GWVQRVEIALGVARGLLYLHEECETQII 613
             EE   L +V E M  G+L ++L   G+   G    ++ +L V   + YL        +
Sbjct: 74  IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFV 130
Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP 673
           H D+  +NVL+       + +AK+SDFG    L K+ + T    +  + + APE LR   
Sbjct: 131 HRDLAARNVLVS-----EDNVAKVSDFG----LTKEASSTQDTGKLPVKWTAPEALREAA 181
Query: 674 VTTKVDVFSFGVMLLEI 690
            +TK DV+SFG++L EI
Sbjct: 182 FSTKSDVWSFGILLWEI 198

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEI-AVKKLEKDIEKTNEEFMTELK 539
           + +E    F + +G G+ G V   + R   L+D   E+ AVKKL+   E+   +F  E++
Sbjct: 9   QFEERHLKFLQQLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 66
Query: 540 IIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           I+    H N+V+  G C    +R   L+ E +P G+L ++L    +R   ++ ++    +
Sbjct: 67  ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQI 126
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
            +G+ YL      + IH D+  +N+L     ++     KI DFG++K+L +D+       
Sbjct: 127 CKGMEYL---GTKRYIHRDLATRNIL-----VENENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 658 RGT--MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            G   + + APE L     +   DV+SFGV+L E+ 
Sbjct: 179 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 141/304 (46%), Gaps = 52/304 (17%)
Query: 496 VGTGSSGKVYRGILR---LKDTQIEIAVKKLEKDIE-KTNEEFMTELKII-GRTHHKNLV 550
           +G GS G VY G  R     + +  +AVK + +    +   EF+ E  ++ G T H ++V
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLF--------HEGQRPGWVQR-VEIALGVARGL 601
           RLLG  S+    L+V ELM +G L ++L         + G+ P  +Q  +++A  +A G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL+ +   + +H D+  +N +     +  ++  KI DFG++    +D   TD   +G  
Sbjct: 144 AYLNAK---KFVHRDLAARNCM-----VAHDFTVKIGDFGMT----RDIXETDXXRKGGK 191
Query: 662 G-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXXXXW 716
           G     ++APE L++   TT  D++SFGV+L EI                          
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LAEQPYQGLSNEQ 240
Query: 717 VISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE 776
           V+  ++         + PE ++DL R          C   +PN+RP+  +++++L+  L 
Sbjct: 241 VLKFVMDGGYLDQPDNCPERVTDLMRM---------CWQFNPNMRPTFLEIVNLLKDDLH 291
Query: 777 VGMP 780
              P
Sbjct: 292 PSFP 295

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E+   +    K +G G  G+V+ G     +   ++AVK L K    + + F+ E  ++  
Sbjct: 9   EIPRESIKLVKRLGAGQFGEVWMGYY---NNSTKVAVKTL-KPGTMSVQAFLEEANLMKT 64
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLL 602
             H  LVRL    + E+   ++ E M  G+L +FL   EG +    + ++ +  +A G+ 
Sbjct: 65  LQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMA 124
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           Y+  +     IH D++  NVL+       + M KI+DFG+++++  ++       +  + 
Sbjct: 125 YIERK---NYIHRDLRAANVLVS-----ESLMCKIADFGLARVIEDNEYTAREGAKFPIK 176
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + APE +     T K DV+SFG++L EI+
Sbjct: 177 WTAPEAINFGCFTIKSDVWSFGILLYEIV 205

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEI-AVKKLEKDIEKTNEEFMTELK 539
           + +E    F + +G G+ G V   + R   L+D   E+ AVKKL+   E+   +F  E++
Sbjct: 9   QFEERHLKFLRQLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 66
Query: 540 IIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           I+    H N+V+  G C    +R   L+ E +P G+L  +L    +R   ++ ++    +
Sbjct: 67  ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQI 126
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
            +G+ YL      + IH D+  +N+L     ++     KI DFG++K+L +D+       
Sbjct: 127 CKGMEYL---GTKRYIHRDLATRNIL-----VENENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 658 RGT--MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            G   + + APE L     +   DV+SFGV+L E+ 
Sbjct: 179 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 114/234 (48%), Gaps = 18/234 (7%)
Query: 466 NYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEI-AVK 521
           N +   +M   F +    + +E    F + +G G+ G V   + R   L+D   E+ AVK
Sbjct: 19  NLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSV--EMCRYDPLQDNTGEVVAVK 76
Query: 522 KLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLSNFLF 579
           KL+   E+   +F  E++I+    H N+V+  G C    +R   L+ E +P G+L ++L 
Sbjct: 77  KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ 136
Query: 580 HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD 639
              +R   ++ ++    + +G+ YL      + IH D+  +N+L     ++     KI D
Sbjct: 137 KHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNIL-----VENENRVKIGD 188
Query: 640 FGISKLLNKDQTRTDTNMRGT--MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           FG++K+L +D+        G   + + APE L     +   DV+SFGV+L E+ 
Sbjct: 189 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 242

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 20/197 (10%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G V  G  R      ++AVK ++ D   T + F+ E  ++ +  H NLV+LLG 
Sbjct: 29  IGKGEFGDVMLGDYRGN----KVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGV 82
Query: 556 CSEEDKRL-LVYELMPNGTLSNFLFHEGQRP-GWVQRVEIALGVARGLLYLHEECETQII 613
             EE   L +V E M  G+L ++L   G+   G    ++ +L V   + YL        +
Sbjct: 83  IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFV 139
Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP 673
           H D+  +NVL+       + +AK+SDFG    L K+ + T    +  + + APE LR   
Sbjct: 140 HRDLAARNVLVS-----EDNVAKVSDFG----LTKEASSTQDTGKLPVKWTAPEALREKK 190
Query: 674 VTTKVDVFSFGVMLLEI 690
            +TK DV+SFG++L EI
Sbjct: 191 FSTKSDVWSFGILLWEI 207

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 20/197 (10%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G V  G  R      ++AVK ++ D   T + F+ E  ++ +  H NLV+LLG 
Sbjct: 201 IGKGEFGDVMLGDYRGN----KVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGV 254
Query: 556 CSEEDKRL-LVYELMPNGTLSNFLFHEGQRP-GWVQRVEIALGVARGLLYLHEECETQII 613
             EE   L +V E M  G+L ++L   G+   G    ++ +L V   + YL        +
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFV 311
Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP 673
           H D+  +NVL+       + +AK+SDFG    L K+ + T    +  + + APE LR   
Sbjct: 312 HRDLAARNVLVS-----EDNVAKVSDFG----LTKEASSTQDTGKLPVKWTAPEALREKK 362
Query: 674 VTTKVDVFSFGVMLLEI 690
            +TK DV+SFG++L EI
Sbjct: 363 FSTKSDVWSFGILLWEI 379

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEI-AVKKLEKDIEKTNEEFMTELK 539
           + +E    F + +G G+ G V   + R   L+D   E+ AVKKL+   E+   +F  E++
Sbjct: 13  QFEERHLKFLQQLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 70
Query: 540 IIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           I+    H N+V+  G C    +R   L+ E +P G+L ++L    +R   ++ ++    +
Sbjct: 71  ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 130
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
            +G+ YL      + IH D+  +N+L     ++     KI DFG++K+L +D+       
Sbjct: 131 CKGMEYL---GTKRYIHRDLATRNIL-----VENENRVKIGDFGLTKVLPQDKEXXKVKE 182
Query: 658 RGT--MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            G   + + APE L     +   DV+SFGV+L E+ 
Sbjct: 183 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 218

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEI-AVKKLEKDIEKTNEEFMTELK 539
           + +E    F + +G G+ G V   + R   L+D   E+ AVKKL+   E+   +F  E++
Sbjct: 12  QFEERHLKFLQQLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 69
Query: 540 IIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           I+    H N+V+  G C    +R   L+ E +P G+L ++L    +R   ++ ++    +
Sbjct: 70  ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 129
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
            +G+ YL      + IH D+  +N+L     ++     KI DFG++K+L +D+       
Sbjct: 130 CKGMEYL---GTKRYIHRDLATRNIL-----VENENRVKIGDFGLTKVLPQDKEXXKVKE 181
Query: 658 RGT--MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            G   + + APE L     +   DV+SFGV+L E+ 
Sbjct: 182 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 217

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEI-AVKKLEKDIEKTNEEFMTELK 539
           + +E    F + +G G+ G V   + R   L+D   E+ AVKKL+   E+   +F  E++
Sbjct: 11  QFEERHLKFLQQLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 68
Query: 540 IIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           I+    H N+V+  G C    +R   L+ E +P G+L ++L    +R   ++ ++    +
Sbjct: 69  ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 128
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
            +G+ YL      + IH D+  +N+L     ++     KI DFG++K+L +D+       
Sbjct: 129 CKGMEYL---GTKRYIHRDLATRNIL-----VENENRVKIGDFGLTKVLPQDKEXXKVKE 180
Query: 658 RGT--MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            G   + + APE L     +   DV+SFGV+L E+ 
Sbjct: 181 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 216

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEI-AVKKLEKDIEKTNEEFMTELK 539
           + +E    F + +G G+ G V   + R   L+D   E+ AVKKL+   E+   +F  E++
Sbjct: 6   QFEERHLKFLQQLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 63
Query: 540 IIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           I+    H N+V+  G C    +R   L+ E +P G+L ++L    +R   ++ ++    +
Sbjct: 64  ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
            +G+ YL      + IH D+  +N+L     ++     KI DFG++K+L +D+       
Sbjct: 124 CKGMEYL---GTKRYIHRDLATRNIL-----VENENRVKIGDFGLTKVLPQDKEXXKVKE 175
Query: 658 RGT--MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            G   + + APE L     +   DV+SFGV+L E+ 
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEI-AVKKLEKDIEKTNEEFMTELK 539
           + +E    F + +G G+ G V   + R   L+D   E+ AVKKL+   E+   +F  E++
Sbjct: 9   QFEERHLKFLQQLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 66
Query: 540 IIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           I+    H N+V+  G C    +R   L+ E +P G+L ++L    +R   ++ ++    +
Sbjct: 67  ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 126
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
            +G+ YL      + IH D+  +N+L     ++     KI DFG++K+L +D+       
Sbjct: 127 CKGMEYL---GTKRYIHRDLATRNIL-----VENENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 658 RGT--MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            G   + + APE L     +   DV+SFGV+L E+ 
Sbjct: 179 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 214

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEI-AVKKLEKDIEKTNEEFMTELK 539
           + +E    F + +G G+ G V   + R   L+D   E+ AVKKL+   E+   +F  E++
Sbjct: 4   QFEERHLKFLQQLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 61
Query: 540 IIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           I+    H N+V+  G C    +R   L+ E +P G+L ++L    +R   ++ ++    +
Sbjct: 62  ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 121
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
            +G+ YL      + IH D+  +N+L     ++     KI DFG++K+L +D+       
Sbjct: 122 CKGMEYL---GTKRYIHRDLATRNIL-----VENENRVKIGDFGLTKVLPQDKEXXKVKE 173
Query: 658 RGT--MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            G   + + APE L     +   DV+SFGV+L E+ 
Sbjct: 174 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 209

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 27/227 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTNEEFMTELK 539
           Q ++       + +G G+ GKV+      L     ++ +AVK L+       ++F  E +
Sbjct: 10  QHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAE 69
Query: 540 IIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQ--------RP------ 585
           ++    H+++V+  G C + D  ++V+E M +G L+ FL   G         +P      
Sbjct: 70  LLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 129
Query: 586 -GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK 644
            G  Q + IA  +A G++YL  +     +H D+  +N L     +  N + KI DFG+S+
Sbjct: 130 LGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCL-----VGANLLVKIGDFGMSR 181
Query: 645 -LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
            + + D  R   +    + ++ PE +     TT+ DV+SFGV+L EI
Sbjct: 182 DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEI 228

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEI-AVKKLEKDIEKTNEEFMTELK 539
           + +E    F + +G G+ G V   + R   L+D   E+ AVKKL+   E+   +F  E++
Sbjct: 24  QFEERHLKFLQQLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 81
Query: 540 IIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           I+    H N+V+  G C    +R   L+ E +P G+L ++L    +R   ++ ++    +
Sbjct: 82  ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 141
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
            +G+ YL      + IH D+  +N+L     ++     KI DFG++K+L +D+       
Sbjct: 142 CKGMEYL---GTKRYIHRDLATRNIL-----VENENRVKIGDFGLTKVLPQDKEXXKVKE 193
Query: 658 RGT--MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            G   + + APE L     +   DV+SFGV+L E+ 
Sbjct: 194 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEI-AVKKLEKDIEKTNEEFMTELK 539
           + +E    F + +G G+ G V   + R   L+D   E+ AVKKL+   E+   +F  E++
Sbjct: 5   QFEERHLKFLQQLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 62
Query: 540 IIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           I+    H N+V+  G C    +R   L+ E +P G+L ++L    +R   ++ ++    +
Sbjct: 63  ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 122
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
            +G+ YL      + IH D+  +N+L     ++     KI DFG++K+L +D+       
Sbjct: 123 CKGMEYL---GTKRYIHRDLATRNIL-----VENENRVKIGDFGLTKVLPQDKEXXKVKE 174
Query: 658 RGT--MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            G   + + APE L     +   DV+SFGV+L E+ 
Sbjct: 175 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 210

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEI-AVKKLEKDIEKTNEEFMTELK 539
           + +E    F + +G G+ G V   + R   L+D   E+ AVKKL+   E+   +F  E++
Sbjct: 24  QFEERHLKFLQQLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 81
Query: 540 IIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           I+    H N+V+  G C    +R   L+ E +P G+L ++L    +R   ++ ++    +
Sbjct: 82  ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 141
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
            +G+ YL      + IH D+  +N+L     ++     KI DFG++K+L +D+       
Sbjct: 142 CKGMEYL---GTKRYIHRDLATRNIL-----VENENRVKIGDFGLTKVLPQDKEXXKVKE 193
Query: 658 RGT--MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            G   + + APE L     +   DV+SFGV+L E+ 
Sbjct: 194 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEI-AVKKLEKDIEKTNEEFMTELK 539
           + +E    F + +G G+ G V   + R   L+D   E+ AVKKL+   E+   +F  E++
Sbjct: 10  QFEERHLKFLQQLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 67
Query: 540 IIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           I+    H N+V+  G C    +R   L+ E +P G+L ++L    +R   ++ ++    +
Sbjct: 68  ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 127
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
            +G+ YL      + IH D+  +N+L     ++     KI DFG++K+L +D+       
Sbjct: 128 CKGMEYL---GTKRYIHRDLATRNIL-----VENENRVKIGDFGLTKVLPQDKEXXKVKE 179
Query: 658 RGT--MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            G   + + APE L     +   DV+SFGV+L E+ 
Sbjct: 180 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 215

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEI-AVKKLEKDIEKTNEEFMTELK 539
           + +E    F + +G G+ G V   + R   L+D   E+ AVKKL+   E+   +F  E++
Sbjct: 6   QFEERHLKFLQQLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 63
Query: 540 IIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           I+    H N+V+  G C    +R   L+ E +P G+L ++L    +R   ++ ++    +
Sbjct: 64  ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
            +G+ YL      + IH D+  +N+L     ++     KI DFG++K+L +D+       
Sbjct: 124 CKGMEYL---GTKRYIHRDLATRNIL-----VENENRVKIGDFGLTKVLPQDKEXXKVKE 175
Query: 658 RGT--MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            G   + + APE L     +   DV+SFGV+L E+ 
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 20/197 (10%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G V  G  R      ++AVK ++ D   T + F+ E  ++ +  H NLV+LLG 
Sbjct: 14  IGKGEFGDVMLGDYRGN----KVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGV 67
Query: 556 CSEEDKRL-LVYELMPNGTLSNFLFHEGQRP-GWVQRVEIALGVARGLLYLHEECETQII 613
             EE   L +V E M  G+L ++L   G+   G    ++ +L V   + YL        +
Sbjct: 68  IVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFV 124
Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP 673
           H D+  +NVL+       + +AK+SDFG    L K+ + T    +  + + APE LR   
Sbjct: 125 HRDLAARNVLVS-----EDNVAKVSDFG----LTKEASSTQDTGKLPVKWTAPEALREKK 175
Query: 674 VTTKVDVFSFGVMLLEI 690
            +TK DV+SFG++L EI
Sbjct: 176 FSTKSDVWSFGILLWEI 192

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 16/200 (8%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G++  VYR   + K TQ   A+K L+K ++K  +   TE+ ++ R  H N+++L   
Sbjct: 61  LGRGATSIVYR--CKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIKLKEI 116
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEECETQII 613
                +  LV EL+  G L + +  +G    + +R   +    +   + YLHE     I+
Sbjct: 117 FETPTEISLVLELVTGGELFDRIVEKGY---YSERDAADAVKQILEAVAYLHE---NGIV 170
Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP 673
           H D+KP+N+L      D     KI+DFG+SK++ + Q    T + GT GY APE LR   
Sbjct: 171 HRDLKPENLLYATPAPDAPL--KIADFGLSKIV-EHQVLMKT-VCGTPGYCAPEILRGCA 226
Query: 674 VTTKVDVFSFGVMLLEIICG 693
              +VD++S G++   ++CG
Sbjct: 227 YGPEVDMWSVGIITYILLCG 246

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 102/199 (51%), Gaps = 13/199 (6%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           K +G G  G+V+ G     +   ++AVK L K    + + F+ E  ++    H  LVRL 
Sbjct: 18  KKLGAGQFGEVWMGYY---NNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLY 73
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLLYLHEECETQI 612
              ++E+   ++ E M  G+L +FL   EG +    + ++ +  +A G+ Y+  +     
Sbjct: 74  AVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NY 130
Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV 672
           IH D++  NVL+       + M KI+DFG+++++  ++       +  + + APE +   
Sbjct: 131 IHRDLRAANVLVS-----ESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 185
Query: 673 PVTTKVDVFSFGVMLLEII 691
             T K +V+SFG++L EI+
Sbjct: 186 CFTIKSNVWSFGILLYEIV 204

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 108/214 (50%), Gaps = 22/214 (10%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKL-------EKDIEKTNEEFMTELKIIGRT 544
           + K +G G  G V++G L +KD  + +A+K L       E ++ +  +EF  E+ I+   
Sbjct: 23  YEKQIGKGGFGLVHKGRL-VKDKSV-VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 545 HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYL 604
           +H N+V+L G      +  +V E +P G L + L  +     W  ++ + L +A G+ Y+
Sbjct: 81  NHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTN--YMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
             +    I+H D++  N+ L  ++LD N    AK++DFG+S    +    + + + G   
Sbjct: 139 QNQ-NPPIVHRDLRSPNIFL--QSLDENAPVCAKVADFGLS----QQSVHSVSGLLGNFQ 191
Query: 663 YVAPEWL--RNVPVTTKVDVFSFGVMLLEIICGR 694
           ++APE +       T K D +SF ++L  I+ G 
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 485 LQEATKGFSKLVGTGSSGKVYRGILRLKDT--QIEIAVKKL---EKDIEKTNEEFMTELK 539
           + E  K   KL G G S  VY      +DT   I++A+K +    ++ E+T + F  E+ 
Sbjct: 9   INERYKIVDKLGGGGMS-TVYLA----EDTILNIKVAIKAIFIPPREKEETLKRFEREVH 63
Query: 540 IIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR-VEIALGVA 598
              +  H+N+V ++    E+D   LV E +   TLS ++  E   P  V   +     + 
Sbjct: 64  NSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQIL 121
Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR 658
            G+ + H+    +I+H DIKPQN+L+D     +N   KI DFGI+K L++       ++ 
Sbjct: 122 DGIKHAHD---MRIVHRDIKPQNILID-----SNKTLKIFDFGIAKALSETSLTQTNHVL 173
Query: 659 GTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           GT+ Y +PE  +        D++S G++L E++ G 
Sbjct: 174 GTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEI-AVKKLEKDIEKTNEEFMTELK 539
           + +E    F + +G G+ G V   + R   L+D   E+ AVKKL+   E+   +F  E++
Sbjct: 6   QFEERHLKFLQQLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 63
Query: 540 IIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           I+    H N+V+  G C    +R   L+ E +P G+L ++L    +R   ++ ++    +
Sbjct: 64  ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
            +G+ YL      + IH D+  +N+L     ++     KI DFG++K+L +D+       
Sbjct: 124 CKGMEYL---GTKRYIHRDLATRNIL-----VENENRVKIGDFGLTKVLPQDKEFFKVKE 175
Query: 658 RGT--MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            G   + + APE L     +   DV+SFGV+L E+ 
Sbjct: 176 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E+   T    + +G G +G+V+ G     +   ++AVK L K    + + F+ E  ++ +
Sbjct: 9   EVPRETLKLVERLGAGQAGEVWMGYY---NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQ 64
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLL 602
             H+ LVRL    ++E    ++ E M NG+L +FL    G +    + +++A  +A G+ 
Sbjct: 65  LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           ++ E      IH D++  N+L+     DT    KI+DFG+++L+   +       +  + 
Sbjct: 124 FIEER---NYIHRDLRAANILVS----DT-LSCKIADFGLARLIEDAEXTAREGAKFPIK 175
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           + APE +     T K DV+SFG++L EI+   R
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 118/227 (51%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQI-EIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G+ G+V      G+ + K  ++ ++AVK L+ D  EK   + ++E+   K+IG
Sbjct: 32  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQ------------- 589
           +  HKN++ LLG C+++    ++ E    G L  +L  + +RP  ++             
Sbjct: 92  K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--QARRPPGLEFSFNPSHNPEEQL 147
Query: 590 ----RVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V  A  VARG+ YL      + IH D+  +NVL+     + N M KI+DFG+++ 
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLV----TEDNVM-KIADFGLARD 199
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           ++  D  +  TN R  + ++APE L +   T + DV+SFGV+L EI 
Sbjct: 200 IHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 107/214 (50%), Gaps = 22/214 (10%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKL-------EKDIEKTNEEFMTELKIIGRT 544
           + K +G G  G V++G L +KD  + +A+K L       E ++ +  +EF  E+ I+   
Sbjct: 23  YEKQIGKGGFGLVHKGRL-VKDKSV-VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 545 HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYL 604
           +H N+V+L G      +  +V E +P G L + L  +     W  ++ + L +A G+ Y+
Sbjct: 81  NHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTN--YMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
             +    I+H D++  N+ L  ++LD N    AK++DFG S    +    + + + G   
Sbjct: 139 QNQ-NPPIVHRDLRSPNIFL--QSLDENAPVCAKVADFGTS----QQSVHSVSGLLGNFQ 191
Query: 663 YVAPEWL--RNVPVTTKVDVFSFGVMLLEIICGR 694
           ++APE +       T K D +SF ++L  I+ G 
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E+   T    + +G G  G+V+ G     +   ++AVK L K    + + F+ E  ++ +
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYY---NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQ 64
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLL 602
             H+ LVRL    ++E    ++ E M NG+L +FL    G +    + +++A  +A G+ 
Sbjct: 65  LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           ++ E      IH D++  N+L+     DT    KI+DFG+++L+  ++       +  + 
Sbjct: 124 FIEER---NYIHRDLRAANILVS----DT-LSCKIADFGLARLIEDNEXTAREGAKFPIK 175
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           + APE +     T K DV+SFG++L EI+   R
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E+   T    + +G G  G+V+ G     +   ++AVK L K    + + F+ E  ++ +
Sbjct: 11  EVPRETLKLVERLGAGQFGEVWMGYY---NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQ 66
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLL 602
             H+ LVRL    ++E    ++ E M NG+L +FL    G +    + +++A  +A G+ 
Sbjct: 67  LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 125
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           ++ E      IH D++  N+L+     DT    KI+DFG+++L+  ++       +  + 
Sbjct: 126 FIEER---NYIHRDLRAANILVS----DT-LSCKIADFGLARLIEDNEXTAREGAKFPIK 177
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           + APE +     T K DV+SFG++L EI+   R
Sbjct: 178 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 210

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 22/211 (10%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE-KTNEEFMTELKIIGRTHHKNLVRL-- 552
           +GTG  G V R I   +DT  ++A+K+  +++  K  E +  E++I+ + +H N+V    
Sbjct: 22  LGTGGFGYVLRWIH--QDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 553 ----LGFCSEEDKRLLVYELMPNGTLSNFL--FHE--GQRPGWVQRVEIALGVARGLLYL 604
               L   +  D  LL  E    G L  +L  F    G + G ++   +   ++  L YL
Sbjct: 80  VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR--TLLSDISSALRYL 137
Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
           HE    +IIH D+KP+N++L  +      + KI D G +K L  DQ    T   GT+ Y+
Sbjct: 138 HE---NRIIHRDLKPENIVL--QPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYL 190
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           APE L     T  VD +SFG +  E I G R
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITGFR 221

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 104/211 (49%), Gaps = 22/211 (10%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE-KTNEEFMTELKIIGRTHHKNLVRL-- 552
           +GTG  G V R I   +DT  ++A+K+  +++  K  E +  E++I+ + +H N+V    
Sbjct: 23  LGTGGFGYVLRWIH--QDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 553 ----LGFCSEEDKRLLVYELMPNGTLSNFL--FHE--GQRPGWVQRVEIALGVARGLLYL 604
               L   +  D  LL  E    G L  +L  F    G + G ++   +   ++  L YL
Sbjct: 81  VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR--TLLSDISSALRYL 138
Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
           HE    +IIH D+KP+N++L  +      + KI D G +K L  DQ    T   GT+ Y+
Sbjct: 139 HE---NRIIHRDLKPENIVL--QPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYL 191
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           APE L     T  VD +SFG +  E I G R
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECITGFR 222

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 151/332 (45%), Gaps = 62/332 (18%)
Query: 468 FDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEIAVKKLE 524
           F P+  E++  + T   L+E        +G GS G VY G  R     + +  +AVK + 
Sbjct: 4   FVPDEWEVSREKITL--LRE--------LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN 53
Query: 525 KDIE-KTNEEFMTELKII-GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF--- 579
           +    +   EF+ E  ++ G T H ++VRLLG  S+    L+V ELM +G L ++L    
Sbjct: 54  ESASLRERIEFLNEASVMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLR 112
Query: 580 -----HEGQRPGWVQR-VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNY 633
                + G+ P  +Q  +++A  +A G+ YL+ +   + +H D+  +N +     +  ++
Sbjct: 113 PEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCM-----VAHDF 164
Query: 634 MAKISDFGISKLLNKDQTRTDTNMRGTMG-----YVAPEWLRNVPVTTKVDVFSFGVMLL 688
             KI DFG++    +D   TD   +G  G     ++APE L++   TT  D++SFGV+L 
Sbjct: 165 TVKIGDFGMT----RDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 220
Query: 689 EIICGRRHXXXXXXXXXXXXXXXXXXXWVISCMLSRNLQVLVSHDPEVLSDLERFERMAM 748
           EI                          V+  ++         + PE ++DL R      
Sbjct: 221 EITS-----------LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRM----- 264
Query: 749 VGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMP 780
               C   +P +RP+  +++++L+  L    P
Sbjct: 265 ----CWQFNPKMRPTFLEIVNLLKDDLHPSFP 292

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIA--VKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           K +G+G+ G V +G  ++K     +A  + K E +     +E + E  ++ +  +  +VR
Sbjct: 31  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 90
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           ++G C E +  +LV E+   G L+ +L  + +       +E+   V+ G+ YL E   + 
Sbjct: 91  MIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SN 145
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT--RTDTNMRGTMGYVAPEWL 669
            +H D+  +NVLL      T + AKISDFG+SK L  D+   +  T+ +  + + APE +
Sbjct: 146 FVHRDLAARNVLLV-----TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 200
Query: 670 RNVPVTTKVDVFSFGVMLLE 689
                ++K DV+SFGV++ E
Sbjct: 201 NYYKFSSKSDVWSFGVLMWE 220

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E+   T    + +G G  G+V+ G     +   ++AVK L K    + + F+ E  ++ +
Sbjct: 10  EVPRETLKLVERLGAGQFGEVWMGYY---NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQ 65
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLL 602
             H+ LVRL    ++E    ++ E M NG+L +FL    G +    + +++A  +A G+ 
Sbjct: 66  LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 124
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           ++ E      IH D++  N+L+     DT    KI+DFG+++L+  ++       +  + 
Sbjct: 125 FIEER---NYIHRDLRAANILVS----DT-LSCKIADFGLARLIEDNEXTAREGAKFPIK 176
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           + APE +     T K DV+SFG++L EI+   R
Sbjct: 177 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 209

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 11/202 (5%)
Query: 492 FSKLVGTGSSGKVYRGIL-RLKDTQIEIAVKKLEKDIEKTNEE-FMTELKIIGRTHHKNL 549
            ++++G G  G+VY G+    K  +I +AVK  +KD    N+E FM+E  I+    H ++
Sbjct: 16  LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V+L+G   EE+   ++ EL P G L ++L         +  V  +L + + + YL     
Sbjct: 76  VKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES--- 131
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
              +H DI  +N+L+      +    K+ DFG+S+ +  +     +  R  + +++PE +
Sbjct: 132 INCVHRDIAVRNILVA-----SPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 186
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
                TT  DV+ F V + EI+
Sbjct: 187 NFRRFTTASDVWMFAVCMWEIL 208

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 52/304 (17%)
Query: 496 VGTGSSGKVYRGILR---LKDTQIEIAVKKLEKDIE-KTNEEFMTELKII-GRTHHKNLV 550
           +G GS G VY G  R     + +  +AVK + +    +   EF+ E  ++ G T H ++V
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLF--------HEGQRPGWVQR-VEIALGVARGL 601
           RLLG  S+    L+V ELM +G L ++L         + G+ P  +Q  +++A  +A G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL+ +   + +H D+  +N +     +  ++  KI DFG++    +D   TD   +G  
Sbjct: 144 AYLNAK---KFVHRDLAARNCM-----VAHDFTVKIGDFGMT----RDIXETDXXRKGGK 191
Query: 662 G-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXXXXW 716
           G     ++APE L++   TT  D++SFGV+L EI                          
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LAEQPYQGLSNEQ 240
Query: 717 VISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE 776
           V+  ++         + PE ++DL R          C   +P +RP+  +++++L+  L 
Sbjct: 241 VLKFVMDGGYLDQPDNCPERVTDLMRM---------CWQFNPKMRPTFLEIVNLLKDDLH 291
Query: 777 VGMP 780
              P
Sbjct: 292 PSFP 295

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E+   T    + +G G  G+V+ G     +   ++AVK L K    + + F+ E  ++ +
Sbjct: 18  EVPRETLKLVERLGAGQFGEVWMGYY---NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQ 73
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLL 602
             H+ LVRL    ++E    ++ E M NG+L +FL    G +    + +++A  +A G+ 
Sbjct: 74  LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 132
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           ++ E      IH D++  N+L+     DT    KI+DFG+++L+  ++       +  + 
Sbjct: 133 FIEER---NYIHRDLRAANILVS----DT-LSCKIADFGLARLIEDNEXTAREGAKFPIK 184
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           + APE +     T K DV+SFG++L EI+   R
Sbjct: 185 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 217

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 138/305 (45%), Gaps = 50/305 (16%)
Query: 492 FSKLVGTGSSGKVYRGILR--LKDT-QIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHK 547
            S+ +G GS G VY G+ +  +KD  +  +A+K + E    +   EF+ E  ++   +  
Sbjct: 23  MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR---------PGWVQRVEIALGVA 598
           ++VRLLG  S+    L++ ELM  G L ++L               P   + +++A  +A
Sbjct: 83  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR 658
            G+ YL+     + +H D+  +N +     +  ++  KI DFG++    +D   TD   +
Sbjct: 143 DGMAYLN---ANKFVHRDLAARNCM-----VAEDFTVKIGDFGMT----RDIXETDXXRK 190
Query: 659 GTMG-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXX 713
           G  G     +++PE L++   TT  DV+SFGV+L EI                       
Sbjct: 191 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-------- 242
Query: 714 XXWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG 773
              V+  ++   L     + P++L     FE M M    C   +P +RPS  ++I  ++ 
Sbjct: 243 ---VLRFVMEGGLLDKPDNCPDML-----FELMRM----CWQYNPKMRPSFLEIISSIKE 290
Query: 774 TLEVG 778
            +E G
Sbjct: 291 EMEPG 295

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIA--VKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           K +G+G+ G V +G  ++K     +A  + K E +     +E + E  ++ +  +  +VR
Sbjct: 17  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           ++G C E +  +LV E+   G L+ +L  + +       +E+   V+ G+ YL E   + 
Sbjct: 77  MIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SN 131
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT--RTDTNMRGTMGYVAPEWL 669
            +H D+  +NVLL      T + AKISDFG+SK L  D+   +  T+ +  + + APE +
Sbjct: 132 FVHRDLAARNVLLV-----TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 186
Query: 670 RNVPVTTKVDVFSFGVMLLE 689
                ++K DV+SFGV++ E
Sbjct: 187 NYYKFSSKSDVWSFGVLMWE 206

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIA--VKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           K +G+G+ G V +G  ++K     +A  + K E +     +E + E  ++ +  +  +VR
Sbjct: 11  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 70
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           ++G C E +  +LV E+   G L+ +L  + +       +E+   V+ G+ YL E   + 
Sbjct: 71  MIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SN 125
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT--RTDTNMRGTMGYVAPEWL 669
            +H D+  +NVLL      T + AKISDFG+SK L  D+   +  T+ +  + + APE +
Sbjct: 126 FVHRDLAARNVLLV-----TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 180
Query: 670 RNVPVTTKVDVFSFGVMLLE 689
                ++K DV+SFGV++ E
Sbjct: 181 NYYKFSSKSDVWSFGVLMWE 200

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 118/227 (51%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQI-EIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G+ G+V      G+ + K  ++ ++AVK L+ D  EK   + ++E+   K+IG
Sbjct: 24  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 83
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++ E    G L  +L  + +RP  ++             
Sbjct: 84  K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--QARRPPGLEYSYNPSHNPEEQL 139
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V  A  VARG+ YL      + IH D+  +NVL+     + N M KI+DFG+++ 
Sbjct: 140 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLV----TEDNVM-KIADFGLARD 191
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           ++  D  +  TN R  + ++APE L +   T + DV+SFGV+L EI 
Sbjct: 192 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 238

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 118/227 (51%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQI-EIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G+ G+V      G+ + K  ++ ++AVK L+ D  EK   + ++E+   K+IG
Sbjct: 73  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++ E    G L  +L  + +RP  ++             
Sbjct: 133 K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--QARRPPGLEYSYNPSHNPEEQL 188
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V  A  VARG+ YL      + IH D+  +NVL+     + N M KI+DFG+++ 
Sbjct: 189 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVT----EDNVM-KIADFGLARD 240
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           ++  D  +  TN R  + ++APE L +   T + DV+SFGV+L EI 
Sbjct: 241 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 287

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E+   T    + +G G  G+V+ G     +   ++AVK L K    + + F+ E  ++ +
Sbjct: 15  EVPRETLKLVERLGAGQFGEVWMGYY---NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQ 70
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLL 602
             H+ LVRL    ++E    ++ E M NG+L +FL    G +    + +++A  +A G+ 
Sbjct: 71  LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 129
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           ++ E      IH D++  N+L+     DT    KI+DFG+++L+  ++       +  + 
Sbjct: 130 FIEER---NYIHRDLRAANILVS----DT-LSCKIADFGLARLIEDNEXTAREGAKFPIK 181
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           + APE +     T K DV+SFG++L EI+   R
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 11/202 (5%)
Query: 492 FSKLVGTGSSGKVYRGIL-RLKDTQIEIAVKKLEKDIEKTNEE-FMTELKIIGRTHHKNL 549
            ++++G G  G+VY G+    K  +I +AVK  +KD    N+E FM+E  I+    H ++
Sbjct: 28  LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 87
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V+L+G   EE+   ++ EL P G L ++L         +  V  +L + + + YL     
Sbjct: 88  VKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES--- 143
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
              +H DI  +N+L+      +    K+ DFG+S+ +  +     +  R  + +++PE +
Sbjct: 144 INCVHRDIAVRNILVA-----SPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 198
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
                TT  DV+ F V + EI+
Sbjct: 199 NFRRFTTASDVWMFAVCMWEIL 220

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIA--VKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           K +G+G+ G V +G  ++K     +A  + K E +     +E + E  ++ +  +  +VR
Sbjct: 33  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           ++G C E +  +LV E+   G L+ +L  + +       +E+   V+ G+ YL E   + 
Sbjct: 93  MIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SN 147
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT--RTDTNMRGTMGYVAPEWL 669
            +H D+  +NVLL      T + AKISDFG+SK L  D+   +  T+ +  + + APE +
Sbjct: 148 FVHRDLAARNVLLV-----TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 670 RNVPVTTKVDVFSFGVMLLE 689
                ++K DV+SFGV++ E
Sbjct: 203 NYYKFSSKSDVWSFGVLMWE 222

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIA--VKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           K +G+G+ G V +G  ++K     +A  + K E +     +E + E  ++ +  +  +VR
Sbjct: 33  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           ++G C E +  +LV E+   G L+ +L  + +       +E+   V+ G+ YL E   + 
Sbjct: 93  MIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SN 147
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT--RTDTNMRGTMGYVAPEWL 669
            +H D+  +NVLL      T + AKISDFG+SK L  D+   +  T+ +  + + APE +
Sbjct: 148 FVHRDLAARNVLLV-----TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 670 RNVPVTTKVDVFSFGVMLLE 689
                ++K DV+SFGV++ E
Sbjct: 203 NYYKFSSKSDVWSFGVLMWE 222

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 24/211 (11%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-------------DIEKTNEEFMTELKIIG 542
           +G+G+ G+V   + + K+   E A+K ++K             +IEK +EE   E+ ++ 
Sbjct: 44  LGSGAYGEVL--LCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL 602
              H N+++L     ++    LV E    G L   + +   +        I   +  G+ 
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGIC 160
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           YLH+     I+H DIKP+N+LL+ K    N   KI DFG+S   +KD    D    GT  
Sbjct: 161 YLHKH---NIVHRDIKPENILLENKNSLLN--IKIVDFGLSSFFSKDYKLRDR--LGTAY 213
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           Y+APE L+      K DV+S GV++  ++CG
Sbjct: 214 YIAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E+   T    + +G G  G+V+ G     +   ++AVK L K    + + F+ E  ++ +
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYY---NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQ 64
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLL 602
             H+ LVRL    ++E    ++ E M NG+L +FL    G +    + +++A  +A G+ 
Sbjct: 65  LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           ++ E      IH D++  N+L+     DT    KI+DFG+++L+  ++       +  + 
Sbjct: 124 FIEER---NYIHRDLRAANILVS----DT-LSCKIADFGLARLIEDNEXTAREGAKFPIK 175
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           + APE +     T K DV+SFG++L EI+   R
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIA--VKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           K +G+G+ G V +G  ++K     +A  + K E +     +E + E  ++ +  +  +VR
Sbjct: 13  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           ++G C E +  +LV E+   G L+ +L  + +       +E+   V+ G+ YL E   + 
Sbjct: 73  MIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SN 127
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT--RTDTNMRGTMGYVAPEWL 669
            +H D+  +NVLL      T + AKISDFG+SK L  D+   +  T+ +  + + APE +
Sbjct: 128 FVHRDLAARNVLLV-----TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 182
Query: 670 RNVPVTTKVDVFSFGVMLLE 689
                ++K DV+SFGV++ E
Sbjct: 183 NYYKFSSKSDVWSFGVLMWE 202

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E+   T    + +G G  G+V+ G     +   ++AVK L K    + + F+ E  ++ +
Sbjct: 17  EVPRETLKLVERLGAGQFGEVWMGYY---NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQ 72
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLL 602
             H+ LVRL    ++E    ++ E M NG+L +FL    G +    + +++A  +A G+ 
Sbjct: 73  LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 131
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           ++ E      IH D++  N+L+     DT    KI+DFG+++L+  ++       +  + 
Sbjct: 132 FIEER---NYIHRDLRAANILVS----DT-LSCKIADFGLARLIEDNEXTAREGAKFPIK 183
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           + APE +     T K DV+SFG++L EI+   R
Sbjct: 184 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 216

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E+   T    + +G G  G+V+ G     +   ++AVK L K    + + F+ E  ++ +
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYY---NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQ 64
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLL 602
             H+ LVRL    ++E    ++ E M NG+L +FL    G +    + +++A  +A G+ 
Sbjct: 65  LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           ++ E      IH D++  N+L+     DT    KI+DFG+++L+  ++       +  + 
Sbjct: 124 FIEER---NYIHRDLRAANILVS----DT-LSCKIADFGLARLIEDNEYTAREGAKFPIK 175
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           + APE +     T K DV+SFG++L EI+   R
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 118/227 (51%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQI-EIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G+ G+V      G+ + K  ++ ++AVK L+ D  EK   + ++E+   K+IG
Sbjct: 32  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++ E    G L  +L  + +RP  ++             
Sbjct: 92  K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--QARRPPGLEYSYNPSHNPEEQL 147
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V  A  VARG+ YL      + IH D+  +NVL+     + N M KI+DFG+++ 
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLV----TEDNVM-KIADFGLARD 199
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           ++  D  +  TN R  + ++APE L +   T + DV+SFGV+L EI 
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 118/227 (51%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQI-EIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G+ G+V      G+ + K  ++ ++AVK L+ D  EK   + ++E+   K+IG
Sbjct: 32  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++ E    G L  +L  + +RP  ++             
Sbjct: 92  K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--QARRPPGLEYCYNPSHNPEEQL 147
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V  A  VARG+ YL      + IH D+  +NVL+     + N M KI+DFG+++ 
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLV----TEDNVM-KIADFGLARD 199
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           ++  D  +  TN R  + ++APE L +   T + DV+SFGV+L EI 
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 118/227 (51%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQI-EIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G+ G+V      G+ + K  ++ ++AVK L+ D  EK   + ++E+   K+IG
Sbjct: 17  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 76
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++ E    G L  +L  + +RP  ++             
Sbjct: 77  K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--QARRPPGLEYCYNPSHNPEEQL 132
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V  A  VARG+ YL      + IH D+  +NVL+     + N M KI+DFG+++ 
Sbjct: 133 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLV----TEDNVM-KIADFGLARD 184
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           ++  D  +  TN R  + ++APE L +   T + DV+SFGV+L EI 
Sbjct: 185 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 231

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 118/227 (51%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQI-EIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G+ G+V      G+ + K  ++ ++AVK L+ D  EK   + ++E+   K+IG
Sbjct: 25  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 84
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++ E    G L  +L  + +RP  ++             
Sbjct: 85  K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--QARRPPGLEYSYNPSHNPEEQL 140
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V  A  VARG+ YL      + IH D+  +NVL+     + N M KI+DFG+++ 
Sbjct: 141 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLV----TEDNVM-KIADFGLARD 192
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           ++  D  +  TN R  + ++APE L +   T + DV+SFGV+L EI 
Sbjct: 193 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 239

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIA--VKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           K +G+G+ G V +G  ++K     +A  + K E +     +E + E  ++ +  +  +VR
Sbjct: 17  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           ++G C E +  +LV E+   G L+ +L  + +       +E+   V+ G+ YL E   + 
Sbjct: 77  MIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SN 131
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT--RTDTNMRGTMGYVAPEWL 669
            +H D+  +NVLL      T + AKISDFG+SK L  D+   +  T+ +  + + APE +
Sbjct: 132 FVHRDLAARNVLLV-----TQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECI 186
Query: 670 RNVPVTTKVDVFSFGVMLLE 689
                ++K DV+SFGV++ E
Sbjct: 187 NYYKFSSKSDVWSFGVLMWE 206

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 11/202 (5%)
Query: 492 FSKLVGTGSSGKVYRGIL-RLKDTQIEIAVKKLEKDIEKTNEE-FMTELKIIGRTHHKNL 549
            ++++G G  G+VY G+    K  +I +AVK  +KD    N+E FM+E  I+    H ++
Sbjct: 12  LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 71
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V+L+G   EE+   ++ EL P G L ++L         +  V  +L + + + YL     
Sbjct: 72  VKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES--- 127
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
              +H DI  +N+L+      +    K+ DFG+S+ +  +     +  R  + +++PE +
Sbjct: 128 INCVHRDIAVRNILVA-----SPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 182
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
                TT  DV+ F V + EI+
Sbjct: 183 NFRRFTTASDVWMFAVCMWEIL 204

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIA--VKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           K +G+G+ G V +G  ++K     +A  + K E +     +E + E  ++ +  +  +VR
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 435
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           ++G C E +  +LV E+   G L+ +L  + +       +E+   V+ G+ YL E   + 
Sbjct: 436 MIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SN 490
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT--RTDTNMRGTMGYVAPEWL 669
            +H D+  +NVLL      T + AKISDFG+SK L  D+   +  T+ +  + + APE +
Sbjct: 491 FVHRDLAARNVLLV-----TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 545
Query: 670 RNVPVTTKVDVFSFGVMLLE 689
                ++K DV+SFGV++ E
Sbjct: 546 NYYKFSSKSDVWSFGVLMWE 565

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEI-AVKKLEKDIEKTNEEFMTELK 539
           + +E    F + +G G+ G V   + R   L+D   E+ AVKKL+   E+   +F  E++
Sbjct: 7   QFEERHLKFLQQLGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 64
Query: 540 IIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           I+    H N+V+  G C    +R   L+ E +P G+L ++L    +R   ++ ++    +
Sbjct: 65  ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 124
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
            +G+ YL      + IH ++  +N+L     ++     KI DFG++K+L +D+       
Sbjct: 125 CKGMEYL---GTKRYIHRNLATRNIL-----VENENRVKIGDFGLTKVLPQDKEYYKVKE 176
Query: 658 RGT--MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            G   + + APE L     +   DV+SFGV+L E+ 
Sbjct: 177 PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 212

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E+   T    + +G G  G+V+ G     +   ++AVK L K    + + F+ E  ++ +
Sbjct: 4   EVPRETLKLVERLGAGQFGEVWMGYY---NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQ 59
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLL 602
             H+ LVRL    ++E   ++  E M NG+L +FL    G +    + +++A  +A G+ 
Sbjct: 60  LQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 118
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           ++ E      IH D++  N+L+     DT    KI+DFG+++L+  ++       +  + 
Sbjct: 119 FIEER---NYIHRDLRAANILVS----DT-LSCKIADFGLARLIEDNEYTAREGAKFPIK 170
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           + APE +     T K DV+SFG++L EI+   R
Sbjct: 171 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 203

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 141/304 (46%), Gaps = 52/304 (17%)
Query: 496 VGTGSSGKVYRGILR---LKDTQIEIAVKKLEKDIE-KTNEEFMTELKII-GRTHHKNLV 550
           +G GS G VY G  R     + +  +AVK + +    +   EF+ E  ++ G T H ++V
Sbjct: 26  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 84
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLF--------HEGQRPGWVQR-VEIALGVARGL 601
           RLLG  S+    L+V ELM +G L ++L         + G+ P  +Q  +++A  +A G+
Sbjct: 85  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL+ +   + +H ++  +N +     +  ++  KI DFG++    +D   TD   +G  
Sbjct: 145 AYLNAK---KFVHRNLAARNCM-----VAHDFTVKIGDFGMT----RDIYETDYYRKGGK 192
Query: 662 G-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXXXXW 716
           G     ++APE L++   TT  D++SFGV+L EI                          
Sbjct: 193 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LAEQPYQGLSNEQ 241
Query: 717 VISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE 776
           V+  ++         + PE ++DL R          C   +PN+RP+  +++++L+  L 
Sbjct: 242 VLKFVMDGGYLDQPDNCPERVTDLMRM---------CWQFNPNMRPTFLEIVNLLKDDLH 292
Query: 777 VGMP 780
              P
Sbjct: 293 PSFP 296

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 118/227 (51%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQI-EIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G+ G+V      G+ + K  ++ ++AVK L+ D  EK   + ++E+   K+IG
Sbjct: 21  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 80
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++ E    G L  +L  + +RP  ++             
Sbjct: 81  K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--QARRPPGLEYSYNPSHNPEEQL 136
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V  A  VARG+ YL      + IH D+  +NVL+     + N M KI+DFG+++ 
Sbjct: 137 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLV----TEDNVM-KIADFGLARD 188
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           ++  D  +  TN R  + ++APE L +   T + DV+SFGV+L EI 
Sbjct: 189 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 235

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIA--VKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           K +G+G+ G V +G  ++K     +A  + K E +     +E + E  ++ +  +  +VR
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 434
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           ++G C E +  +LV E+   G L+ +L  + +       +E+   V+ G+ YL E   + 
Sbjct: 435 MIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SN 489
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT--RTDTNMRGTMGYVAPEWL 669
            +H D+  +NVLL      T + AKISDFG+SK L  D+   +  T+ +  + + APE +
Sbjct: 490 FVHRDLAARNVLLV-----TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 544
Query: 670 RNVPVTTKVDVFSFGVMLLE 689
                ++K DV+SFGV++ E
Sbjct: 545 NYYKFSSKSDVWSFGVLMWE 564

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 141/304 (46%), Gaps = 52/304 (17%)
Query: 496 VGTGSSGKVYRGILR---LKDTQIEIAVKKLEKDIE-KTNEEFMTELKII-GRTHHKNLV 550
           +G GS G VY G  R     + +  +AVK + +    +   EF+ E  ++ G T H ++V
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLF--------HEGQRPGWVQR-VEIALGVARGL 601
           RLLG  S+    L+V ELM +G L ++L         + G+ P  +Q  +++A  +A G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL+ +   + +H ++  +N +     +  ++  KI DFG++    +D   TD   +G  
Sbjct: 144 AYLNAK---KFVHRNLAARNCM-----VAHDFTVKIGDFGMT----RDIYETDYYRKGGK 191
Query: 662 G-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXXXXW 716
           G     ++APE L++   TT  D++SFGV+L EI                          
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LAEQPYQGLSNEQ 240
Query: 717 VISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE 776
           V+  ++         + PE ++DL R          C   +PN+RP+  +++++L+  L 
Sbjct: 241 VLKFVMDGGYLDQPDNCPERVTDLMRM---------CWQFNPNMRPTFLEIVNLLKDDLH 291
Query: 777 VGMP 780
              P
Sbjct: 292 PSFP 295

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 139/306 (45%), Gaps = 54/306 (17%)
Query: 493 SKLVGTGSSGKVYRGILR--LKDT-QIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKN 548
           S+ +G GS G VY G+ +  +KD  +  +A+K + E    +   EF+ E  ++   +  +
Sbjct: 30  SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 89
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWV-----------QRVEIALGV 597
           +VRLLG  S+    L++ ELM  G L ++L     RP              + +++A  +
Sbjct: 90  VVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPAMANNPVLAPPSLSKMIQMAGEI 147
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
           A G+ YL+     + +H D+  +N +     +  ++  KI DFG++    +D   TD   
Sbjct: 148 ADGMAYLN---ANKFVHRDLAARNCM-----VAEDFTVKIGDFGMT----RDIYETDYYR 195
Query: 658 RGTMG-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXX 712
           +G  G     +++PE L++   TT  DV+SFGV+L EI                      
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ------- 248
Query: 713 XXXWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
               V+  ++   L     + P++L     FE M M    C   +P +RPS  ++I  ++
Sbjct: 249 ----VLRFVMEGGLLDKPDNCPDML-----FELMRM----CWQYNPKMRPSFLEIISSIK 295
Query: 773 GTLEVG 778
             +E G
Sbjct: 296 EEMEPG 301

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E+   T    + +G G  G+V+ G     +   ++AVK L K    + + F+ E  ++ +
Sbjct: 15  EVPRETLKLVERLGAGQFGEVWMGYY---NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQ 70
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLL 602
             H+ LVRL    ++E    ++ E M NG+L +FL    G +    + +++A  +A G+ 
Sbjct: 71  LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 129
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           ++ E      IH D++  N+L+     DT    KI+DFG+++L+  ++       +  + 
Sbjct: 130 FIEER---NYIHRDLRAANILVS----DT-LSCKIADFGLARLIEDNEYTAREGAKFPIK 181
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           + APE +     T K DV+SFG++L EI+   R
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIA--VKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           K +G+G+ G V +G  ++K     +A  + K E +     +E + E  ++ +  +  +VR
Sbjct: 23  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 82
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           ++G C E +  +LV E+   G L+ +L  + +       +E+   V+ G+ YL E   + 
Sbjct: 83  MIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEE---SN 137
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT--RTDTNMRGTMGYVAPEWL 669
            +H D+  +NVLL      T + AKISDFG+SK L  D+   +  T+ +  + + APE +
Sbjct: 138 FVHRDLAARNVLLV-----TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 192
Query: 670 RNVPVTTKVDVFSFGVMLLE 689
                ++K DV+SFGV++ E
Sbjct: 193 NYYKFSSKSDVWSFGVLMWE 212

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 28/222 (12%)
Query: 482 FQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT---EL 538
           + E++ +    S  +G+GS G VY+G         ++AVK L K ++ T E+F     E+
Sbjct: 30  YWEIEASEVMLSTRIGSGSFGTVYKG-----KWHGDVAVKIL-KVVDPTPEQFQAFRNEV 83
Query: 539 KIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVA 598
            ++ +T H N++  +G+ ++ D   +V +     +L   L  +  +    Q ++IA   A
Sbjct: 84  AVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTA 142
Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK----DQTRTD 654
           +G+ YLH +    IIH D+K  N+ L           KI DFG++ + ++     Q    
Sbjct: 143 QGMDYLHAK---NIIHRDMKSNNIFLH-----EGLTVKIGDFGLATVKSRWSGSQQVEQP 194
Query: 655 TNMRGTMGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICG 693
           T   G++ ++APE +R   N P + + DV+S+G++L E++ G
Sbjct: 195 T---GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 139/307 (45%), Gaps = 54/307 (17%)
Query: 492 FSKLVGTGSSGKVYRGILR--LKDT-QIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHK 547
            S+ +G GS G VY G+ +  +KD  +  +A+K + E    +   EF+ E  ++   +  
Sbjct: 19  MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWV-----------QRVEIALG 596
           ++VRLLG  S+    L++ ELM  G L ++L     RP              + +++A  
Sbjct: 79  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPAMANNPVLAPPSLSKMIQMAGE 136
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           +A G+ YL+     + +H D+  +N +     +  ++  KI DFG++    +D   TD  
Sbjct: 137 IADGMAYLN---ANKFVHRDLAARNCM-----VAEDFTVKIGDFGMT----RDIYETDYY 184
Query: 657 MRGTMG-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXX 711
            +G  G     +++PE L++   TT  DV+SFGV+L EI                     
Sbjct: 185 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ------ 238
Query: 712 XXXXWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML 771
                V+  ++   L     + P++L     FE M M    C   +P +RPS  ++I  +
Sbjct: 239 -----VLRFVMEGGLLDKPDNCPDML-----FELMRM----CWQYNPKMRPSFLEIISSI 284
Query: 772 EGTLEVG 778
           +  +E G
Sbjct: 285 KEEMEPG 291

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E+   T    + +G G  G+V+ G     +   ++AVK L K    + + F+ E  ++ +
Sbjct: 19  EVPRETLKLVERLGAGQFGEVWMGYY---NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQ 74
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLL 602
             H+ LVRL    ++E    ++ E M NG+L +FL    G +    + +++A  +A G+ 
Sbjct: 75  LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 133
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           ++ E      IH D++  N+L+     DT    KI+DFG+++L+  ++       +  + 
Sbjct: 134 FIEER---NYIHRDLRAANILVS----DT-LSCKIADFGLARLIEDNEYTAREGAKFPIK 185
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           + APE +     T K DV+SFG++L EI+   R
Sbjct: 186 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 218

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E+   T    + +G G  G+V+ G     +   ++AVK L K    + + F+ E  ++ +
Sbjct: 14  EVPRETLKLVERLGAGQFGEVWMGYY---NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQ 69
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLL 602
             H+ LVRL    ++E    ++ E M NG+L +FL    G +    + +++A  +A G+ 
Sbjct: 70  LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 128
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           ++ E      IH D++  N+L+     DT    KI+DFG+++L+  ++       +  + 
Sbjct: 129 FIEER---NYIHRDLRAANILVS----DT-LSCKIADFGLARLIEDNEYTAREGAKFPIK 180
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           + APE +     T K DV+SFG++L EI+   R
Sbjct: 181 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 213

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFM-TELKIIGRTHHKNLV 550
           F  ++GTG+  +V   +   K TQ  +A+K + K+  +  E  M  E+ ++ +  H N+V
Sbjct: 22  FRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEEC 608
            L           L+ +L+  G L + +  +G    + +R    +   V   + YLH+  
Sbjct: 80  ALDDIYESGGHLYLIMQLVSGGELFDRIVEKG---FYTERDASRLIFQVLDAVKYLHD-- 134
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
              I+H D+KP+N+L    +LD +    ISDFG+SK+  +D     +   GT GYVAPE 
Sbjct: 135 -LGIVHRDLKPENLLY--YSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEV 189
Query: 669 LRNVPVTTKVDVFSFGVMLLEIICG 693
           L   P +  VD +S GV+   ++CG
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 14/203 (6%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           K +G G  G+V+ G     +   ++A+K L K    + E F+ E +I+ +  H  LV+L 
Sbjct: 15  KRLGNGQFGEVWMGTW---NGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLY 70
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQI 612
              SEE    +V E M  G+L +FL   EG+       V++A  VA G+ Y+        
Sbjct: 71  AVVSEEPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNY 126
Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV 672
           IH D++  N+L+         + KI+DFG+++L+  ++       +  + + APE     
Sbjct: 127 IHRDLRSANILVG-----NGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG 181
Query: 673 PVTTKVDVFSFGVMLLEIICGRR 695
             T K DV+SFG++L E++   R
Sbjct: 182 RFTIKSDVWSFGILLTELVTKGR 204

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFM-TELKIIGRTHHKNLV 550
           F  ++GTG+  +V   +   K TQ  +A+K + K+  +  E  M  E+ ++ +  H N+V
Sbjct: 22  FRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEEC 608
            L           L+ +L+  G L + +  +G    + +R    +   V   + YLH+  
Sbjct: 80  ALDDIYESGGHLYLIMQLVSGGELFDRIVEKG---FYTERDASRLIFQVLDAVKYLHD-- 134
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
              I+H D+KP+N+L    +LD +    ISDFG+SK+  +D     +   GT GYVAPE 
Sbjct: 135 -LGIVHRDLKPENLLY--YSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEV 189
Query: 669 LRNVPVTTKVDVFSFGVMLLEIICG 693
           L   P +  VD +S GV+   ++CG
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 105/201 (52%), Gaps = 18/201 (8%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ GKVY+   + K+T +  A K ++   E+  E++M E+ I+    H N+V+LL  
Sbjct: 45  LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG-VARGLLYLHEECETQIIH 614
              E+   ++ E    G +   +  E +RP    ++++        L YLH   + +IIH
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL----- 669
            D+K  N+L    TLD +   K++DFG+S    +   R D+ + GT  ++APE +     
Sbjct: 159 RDLKAGNILF---TLDGDI--KLADFGVSAKNTRXIQRRDSFI-GTPYWMAPEVVMCETS 212
Query: 670 RNVPVTTKVDVFSFGVMLLEI 690
           ++ P   K DV+S G+ L+E+
Sbjct: 213 KDRPYDYKADVWSLGITLIEM 233

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+ G     +    +A+K L K    + E F+ E +++ +  H+ LV+L   
Sbjct: 26  LGQGCFGEVWMGTW---NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            SEE   +++ E M  G+L +FL  E G+     Q V++A  +A G+ Y+        +H
Sbjct: 82  VSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D++  N+L+       N + K++DFG+++L+  ++       +  + + APE       
Sbjct: 138 RDLRAANILVG-----ENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 192
Query: 675 TTKVDVFSFGVMLLEIICGRR 695
           T K DV+SFG++L E+    R
Sbjct: 193 TIKSDVWSFGILLTELTTKGR 213

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 52/304 (17%)
Query: 496 VGTGSSGKVYRGILR---LKDTQIEIAVKKLEKDIE-KTNEEFMTELKII-GRTHHKNLV 550
           +G GS G VY G  R     + +  +AVK + +    +   EF+ E  ++ G T H ++V
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLF--------HEGQRPGWVQR-VEIALGVARGL 601
           RLLG  S+    L+V ELM +G L ++L         + G+ P  +Q  +++A  +A G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL+ +   + +H D+  +N +     +  ++  KI DFG++    +D   TD   +G  
Sbjct: 144 AYLNAK---KFVHRDLAARNCM-----VAHDFTVKIGDFGMT----RDIYETDYYRKGGK 191
Query: 662 G-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXXXXW 716
           G     ++APE L++   TT  D++SFGV+L EI                          
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LAEQPYQGLSNEQ 240
Query: 717 VISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE 776
           V+  ++         + PE ++DL R          C   +P +RP+  +++++L+  L 
Sbjct: 241 VLKFVMDGGYLDQPDNCPERVTDLMRM---------CWQFNPKMRPTFLEIVNLLKDDLH 291
Query: 777 VGMP 780
              P
Sbjct: 292 PSFP 295

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 105/201 (52%), Gaps = 18/201 (8%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ GKVY+   + K+T +  A K ++   E+  E++M E+ I+    H N+V+LL  
Sbjct: 45  LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG-VARGLLYLHEECETQIIH 614
              E+   ++ E    G +   +  E +RP    ++++        L YLH   + +IIH
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL----- 669
            D+K  N+L    TLD +   K++DFG+S    +   R D+ + GT  ++APE +     
Sbjct: 159 RDLKAGNILF---TLDGDI--KLADFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMCETS 212
Query: 670 RNVPVTTKVDVFSFGVMLLEI 690
           ++ P   K DV+S G+ L+E+
Sbjct: 213 KDRPYDYKADVWSLGITLIEM 233

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 140/304 (46%), Gaps = 52/304 (17%)
Query: 496 VGTGSSGKVYRGILR---LKDTQIEIAVKKLEKDIE-KTNEEFMTELKII-GRTHHKNLV 550
           +G GS G VY G  R     + +  +AVK + +    +   EF+ E  ++ G T H ++V
Sbjct: 24  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 82
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLF--------HEGQRPGWVQR-VEIALGVARGL 601
           RLLG  S+    L+V ELM +G L ++L         + G+ P  +Q  +++A  +A G+
Sbjct: 83  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL+ +   + +H D+  +N +     +  ++  KI DFG++    +D   TD   +G  
Sbjct: 143 AYLNAK---KFVHRDLAARNCM-----VAHDFTVKIGDFGMT----RDIYETDYYRKGGK 190
Query: 662 G-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXXXXW 716
           G     ++APE L++   TT  D++SFGV+L EI                          
Sbjct: 191 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LAEQPYQGLSNEQ 239
Query: 717 VISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE 776
           V+  ++         + PE ++DL R          C   +P +RP+  +++++L+  L 
Sbjct: 240 VLKFVMDGGYLDQPDNCPERVTDLMRM---------CWQFNPKMRPTFLEIVNLLKDDLH 290
Query: 777 VGMP 780
              P
Sbjct: 291 PSFP 294

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFM-TELKIIGRTHHKNLV 550
           F  ++GTG+  +V   +   K TQ  +A+K + K+  +  E  M  E+ ++ +  H N+V
Sbjct: 22  FRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEEC 608
            L           L+ +L+  G L + +  +G    + +R    +   V   + YLH+  
Sbjct: 80  ALDDIYESGGHLYLIMQLVSGGELFDRIVEKG---FYTERDASRLIFQVLDAVKYLHD-- 134
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
              I+H D+KP+N+L    +LD +    ISDFG+SK+  +D     +   GT GYVAPE 
Sbjct: 135 -LGIVHRDLKPENLLY--YSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEV 189
Query: 669 LRNVPVTTKVDVFSFGVMLLEIICG 693
           L   P +  VD +S GV+   ++CG
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 115/227 (50%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQ-IEIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G+ G+V      GI + K  + + +AVK L+ D  EK   + ++E+   K+IG
Sbjct: 39  LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++ E    G L  +L    +RP  ++             
Sbjct: 99  K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEXSYDINRVPEEQM 154
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V     +ARG+ YL  +   + IH D+  +NVL+       N + KI+DFG+++ 
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT-----ENNVMKIADFGLARD 206
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           +N  D  +  TN R  + ++APE L +   T + DV+SFGV++ EI 
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 137/305 (44%), Gaps = 50/305 (16%)
Query: 492 FSKLVGTGSSGKVYRGILR--LKDT-QIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHK 547
            S+ +G GS G VY G+ +  +KD  +  +A+K + E    +   EF+ E  ++   +  
Sbjct: 14  MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR---------PGWVQRVEIALGVA 598
           ++VRLLG  S+    L++ ELM  G L ++L               P   + +++A  +A
Sbjct: 74  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR 658
            G+ YL+     + +H D+  +N +     +  ++  KI DFG++    +D   TD   +
Sbjct: 134 DGMAYLN---ANKFVHRDLAARNCM-----VAEDFTVKIGDFGMT----RDIXETDXXRK 181
Query: 659 GTMG-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXX 713
           G  G     +++PE L++   TT  DV+SFGV+L EI                       
Sbjct: 182 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-------- 233
Query: 714 XXWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG 773
              V+  ++   L     + P++L +L R          C   +P +RPS  ++I  ++ 
Sbjct: 234 ---VLRFVMEGGLLDKPDNCPDMLLELMRM---------CWQYNPKMRPSFLEIISSIKE 281
Query: 774 TLEVG 778
            +E G
Sbjct: 282 EMEPG 286

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 138/304 (45%), Gaps = 50/304 (16%)
Query: 493 SKLVGTGSSGKVYRGILR--LKDT-QIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKN 548
           S+ +G GS G VY G+ +  +KD  +  +A+K + E    +   EF+ E  ++   +  +
Sbjct: 24  SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 83
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR---------PGWVQRVEIALGVAR 599
           +VRLLG  S+    L++ ELM  G L ++L               P   + +++A  +A 
Sbjct: 84  VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 600 GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG 659
           G+ YL+     + +H D+  +N +     +  ++  KI DFG++    +D   TD   +G
Sbjct: 144 GMAYLN---ANKFVHRDLAARNCM-----VAEDFTVKIGDFGMT----RDIYETDYYRKG 191
Query: 660 TMG-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXXX 714
             G     +++PE L++   TT  DV+SFGV+L EI                        
Sbjct: 192 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ--------- 242
Query: 715 XWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT 774
             V+  ++   L     + P++L     FE M M    C   +P +RPS  ++I  ++  
Sbjct: 243 --VLRFVMEGGLLDKPDNCPDML-----FELMRM----CWQYNPKMRPSFLEIISSIKEE 291
Query: 775 LEVG 778
           +E G
Sbjct: 292 MEPG 295

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 138/304 (45%), Gaps = 50/304 (16%)
Query: 493 SKLVGTGSSGKVYRGILR--LKDT-QIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKN 548
           S+ +G GS G VY G+ +  +KD  +  +A+K + E    +   EF+ E  ++   +  +
Sbjct: 30  SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 89
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR---------PGWVQRVEIALGVAR 599
           +VRLLG  S+    L++ ELM  G L ++L               P   + +++A  +A 
Sbjct: 90  VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 149
Query: 600 GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG 659
           G+ YL+     + +H D+  +N +     +  ++  KI DFG++    +D   TD   +G
Sbjct: 150 GMAYLN---ANKFVHRDLAARNCM-----VAEDFTVKIGDFGMT----RDIYETDYYRKG 197
Query: 660 TMG-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXXX 714
             G     +++PE L++   TT  DV+SFGV+L EI                        
Sbjct: 198 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ--------- 248
Query: 715 XWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT 774
             V+  ++   L     + P++L     FE M M    C   +P +RPS  ++I  ++  
Sbjct: 249 --VLRFVMEGGLLDKPDNCPDML-----FELMRM----CWQYNPKMRPSFLEIISSIKEE 297
Query: 775 LEVG 778
           +E G
Sbjct: 298 MEPG 301

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 138/304 (45%), Gaps = 50/304 (16%)
Query: 493 SKLVGTGSSGKVYRGILR--LKDT-QIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKN 548
           S+ +G GS G VY G+ +  +KD  +  +A+K + E    +   EF+ E  ++   +  +
Sbjct: 21  SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 80
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR---------PGWVQRVEIALGVAR 599
           +VRLLG  S+    L++ ELM  G L ++L               P   + +++A  +A 
Sbjct: 81  VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 140
Query: 600 GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG 659
           G+ YL+     + +H D+  +N +     +  ++  KI DFG++    +D   TD   +G
Sbjct: 141 GMAYLN---ANKFVHRDLAARNCM-----VAEDFTVKIGDFGMT----RDIYETDYYRKG 188
Query: 660 TMG-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXXX 714
             G     +++PE L++   TT  DV+SFGV+L EI                        
Sbjct: 189 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ--------- 239
Query: 715 XWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT 774
             V+  ++   L     + P++L     FE M M    C   +P +RPS  ++I  ++  
Sbjct: 240 --VLRFVMEGGLLDKPDNCPDML-----FELMRM----CWQYNPKMRPSFLEIISSIKEE 288
Query: 775 LEVG 778
           +E G
Sbjct: 289 MEPG 292

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 107/214 (50%), Gaps = 22/214 (10%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKL-------EKDIEKTNEEFMTELKIIGRT 544
           + K +G G  G V++G L +KD  + +A+K L       E ++ +  +EF  E+ I+   
Sbjct: 23  YEKQIGKGGFGLVHKGRL-VKDKSV-VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 545 HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYL 604
           +H N+V+L G      +  +V E +P G L + L  +     W  ++ + L +A G+ Y+
Sbjct: 81  NHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTN--YMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
             +    I+H D++  N+ L  ++LD N    AK++DF +S    +    + + + G   
Sbjct: 139 QNQ-NPPIVHRDLRSPNIFL--QSLDENAPVCAKVADFSLS----QQSVHSVSGLLGNFQ 191
Query: 663 YVAPEWL--RNVPVTTKVDVFSFGVMLLEIICGR 694
           ++APE +       T K D +SF ++L  I+ G 
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 115/227 (50%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQ-IEIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G+ G+V      GI + K  + + +AVK L+ D  EK   + ++E+   K+IG
Sbjct: 39  LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++ E    G L  +L    +RP  ++             
Sbjct: 99  K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEEQM 154
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V     +ARG+ YL  +   + IH D+  +NVL+       N + KI+DFG+++ 
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT-----ENNVMKIADFGLARD 206
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           +N  D  +  TN R  + ++APE L +   T + DV+SFGV++ EI 
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 138/305 (45%), Gaps = 50/305 (16%)
Query: 492 FSKLVGTGSSGKVYRGILR--LKDT-QIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHK 547
            S+ +G GS G VY G+ +  +KD  +  +A+K + E    +   EF+ E  ++   +  
Sbjct: 22  MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR---------PGWVQRVEIALGVA 598
           ++VRLLG  S+    L++ ELM  G L ++L               P   + +++A  +A
Sbjct: 82  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR 658
            G+ YL+     + +H D+  +N +     +  ++  KI DFG++    +D   TD   +
Sbjct: 142 DGMAYLN---ANKFVHRDLAARNCM-----VAEDFTVKIGDFGMT----RDIYETDYYRK 189
Query: 659 GTMG-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXX 713
           G  G     +++PE L++   TT  DV+SFGV+L EI                       
Sbjct: 190 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-------- 241
Query: 714 XXWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG 773
              V+  ++   L     + P++L     FE M M    C   +P +RPS  ++I  ++ 
Sbjct: 242 ---VLRFVMEGGLLDKPDNCPDML-----FELMRM----CWQYNPKMRPSFLEIISSIKE 289
Query: 774 TLEVG 778
            +E G
Sbjct: 290 EMEPG 294

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 138/305 (45%), Gaps = 50/305 (16%)
Query: 492 FSKLVGTGSSGKVYRGILR--LKDT-QIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHK 547
            S+ +G GS G VY G+ +  +KD  +  +A+K + E    +   EF+ E  ++   +  
Sbjct: 22  MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR---------PGWVQRVEIALGVA 598
           ++VRLLG  S+    L++ ELM  G L ++L               P   + +++A  +A
Sbjct: 82  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR 658
            G+ YL+     + +H D+  +N +     +  ++  KI DFG++    +D   TD   +
Sbjct: 142 DGMAYLN---ANKFVHRDLAARNCM-----VAEDFTVKIGDFGMT----RDIYETDYYRK 189
Query: 659 GTMG-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXX 713
           G  G     +++PE L++   TT  DV+SFGV+L EI                       
Sbjct: 190 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-------- 241
Query: 714 XXWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG 773
              V+  ++   L     + P++L     FE M M    C   +P +RPS  ++I  ++ 
Sbjct: 242 ---VLRFVMEGGLLDKPDNCPDML-----FELMRM----CWQYNPKMRPSFLEIISSIKE 289
Query: 774 TLEVG 778
            +E G
Sbjct: 290 EMEPG 294

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+ G     +    +A+K L K    + E F+ E +++ +  H+ LV+L   
Sbjct: 26  LGQGCFGEVWMGTW---NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            SEE   +++ E M  G+L +FL  E G+     Q V++A  +A G+ Y+        +H
Sbjct: 82  VSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D++  N+L+       N + K++DFG+++L+  ++       +  + + APE       
Sbjct: 138 RDLRAANILVG-----ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 675 TTKVDVFSFGVMLLEIICGRR 695
           T K DV+SFG++L E+    R
Sbjct: 193 TIKSDVWSFGILLTELTTKGR 213

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 138/304 (45%), Gaps = 50/304 (16%)
Query: 493 SKLVGTGSSGKVYRGILR--LKDT-QIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKN 548
           S+ +G GS G VY G+ +  +KD  +  +A+K + E    +   EF+ E  ++   +  +
Sbjct: 52  SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 111
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR---------PGWVQRVEIALGVAR 599
           +VRLLG  S+    L++ ELM  G L ++L               P   + +++A  +A 
Sbjct: 112 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 171
Query: 600 GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG 659
           G+ YL+     + +H D+  +N +     +  ++  KI DFG++    +D   TD   +G
Sbjct: 172 GMAYLN---ANKFVHRDLAARNCM-----VAEDFTVKIGDFGMT----RDIYETDYYRKG 219
Query: 660 TMG-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXXX 714
             G     +++PE L++   TT  DV+SFGV+L EI                        
Sbjct: 220 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI-----------ATLAEQPYQGLSN 268
Query: 715 XWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT 774
             V+  ++   L     + P++L     FE M M    C   +P +RPS  ++I  ++  
Sbjct: 269 EQVLRFVMEGGLLDKPDNCPDML-----FELMRM----CWQYNPKMRPSFLEIISSIKEE 319
Query: 775 LEVG 778
           +E G
Sbjct: 320 MEPG 323

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+ G     +    +A+K L K    + E F+ E +++ +  H+ LV+L   
Sbjct: 19  LGQGCFGEVWMGTW---NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            SEE    +V E M  G+L +FL  E G+     Q V++A  +A G+ Y+        +H
Sbjct: 75  VSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 130
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D++  N+L+       N + K++DFG+++L+  ++       +  + + APE       
Sbjct: 131 RDLRAANILVG-----ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 185
Query: 675 TTKVDVFSFGVMLLEIICGRR 695
           T K DV+SFG++L E+    R
Sbjct: 186 TIKSDVWSFGILLTELTTKGR 206

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFM-TELKIIGRTHHKNLV 550
           F  ++GTG+  +V   +   K TQ  +A+K + K   +  E  M  E+ ++ +  H N+V
Sbjct: 22  FRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEEC 608
            L           L+ +L+  G L + +  +G    + +R    +   V   + YLH+  
Sbjct: 80  ALDDIYESGGHLYLIMQLVSGGELFDRIVEKG---FYTERDASRLIFQVLDAVKYLHD-- 134
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
              I+H D+KP+N+L    +LD +    ISDFG+SK+  +D     +   GT GYVAPE 
Sbjct: 135 -LGIVHRDLKPENLLY--YSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEV 189
Query: 669 LRNVPVTTKVDVFSFGVMLLEIICG 693
           L   P +  VD +S GV+   ++CG
Sbjct: 190 LAQKPYSKAVDCWSIGVIAYILLCG 214

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+ G     +    +A+K L K    + E F+ E +++ +  H+ LV+L   
Sbjct: 26  LGQGCFGEVWMGTW---NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            SEE    +V E M  G+L +FL  E G+     Q V++A  +A G+ Y+        +H
Sbjct: 82  VSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D++  N+L+       N + K++DFG+++L+  ++       +  + + APE       
Sbjct: 138 RDLRAANILVG-----ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 675 TTKVDVFSFGVMLLEIICGRR 695
           T K DV+SFG++L E+    R
Sbjct: 193 TIKSDVWSFGILLTELTTKGR 213

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+ G     +    +A+K L K    + E F+ E +++ +  H+ LV+L   
Sbjct: 16  LGQGCFGEVWMGTW---NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            SEE    +V E M  G+L +FL  E G+     Q V++A  +A G+ Y+        +H
Sbjct: 72  VSEEPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 127
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D++  N+L+       N + K++DFG+++L+  ++       +  + + APE       
Sbjct: 128 RDLRAANILVG-----ENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 182
Query: 675 TTKVDVFSFGVMLLEIICGRR 695
           T K DV+SFG++L E+    R
Sbjct: 183 TIKSDVWSFGILLTELTTKGR 203

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 138/305 (45%), Gaps = 50/305 (16%)
Query: 492 FSKLVGTGSSGKVYRGILR--LKDT-QIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHK 547
            S+ +G GS G VY G+ +  +KD  +  +A+K + E    +   EF+ E  ++   +  
Sbjct: 16  MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR---------PGWVQRVEIALGVA 598
           ++VRLLG  S+    L++ ELM  G L ++L               P   + +++A  +A
Sbjct: 76  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR 658
            G+ YL+     + +H D+  +N +     +  ++  KI DFG++    +D   TD   +
Sbjct: 136 DGMAYLN---ANKFVHRDLAARNCM-----VAEDFTVKIGDFGMT----RDIYETDYYRK 183
Query: 659 GTMG-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXX 713
           G  G     +++PE L++   TT  DV+SFGV+L EI                       
Sbjct: 184 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-------- 235
Query: 714 XXWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG 773
              V+  ++   L     + P++L     FE M M    C   +P +RPS  ++I  ++ 
Sbjct: 236 ---VLRFVMEGGLLDKPDNCPDML-----FELMRM----CWQYNPKMRPSFLEIISSIKE 283
Query: 774 TLEVG 778
            +E G
Sbjct: 284 EMEPG 288

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 104/201 (51%), Gaps = 18/201 (8%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ GKVY+   + K+T +  A K ++   E+  E++M E+ I+    H N+V+LL  
Sbjct: 45  LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG-VARGLLYLHEECETQIIH 614
              E+   ++ E    G +   +  E +RP    ++++        L YLH   + +IIH
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLH---DNKIIH 158
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL----- 669
            D+K  N+L    TLD +   K++DFG+S    +   R D  + GT  ++APE +     
Sbjct: 159 RDLKAGNILF---TLDGDI--KLADFGVSAKNTRXIQRRDXFI-GTPYWMAPEVVMCETS 212
Query: 670 RNVPVTTKVDVFSFGVMLLEI 690
           ++ P   K DV+S G+ L+E+
Sbjct: 213 KDRPYDYKADVWSLGITLIEM 233

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+ G     +    +A+K L K    + E F+ E +++ +  H+ LV+L   
Sbjct: 15  LGQGCFGEVWMGTW---NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            SEE    +V E M  G+L +FL  E G+     Q V++A  +A G+ Y+        +H
Sbjct: 71  VSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 126
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D++  N+L+       N + K++DFG+++L+  ++       +  + + APE       
Sbjct: 127 RDLRAANILVG-----ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 181
Query: 675 TTKVDVFSFGVMLLEIICGRR 695
           T K DV+SFG++L E+    R
Sbjct: 182 TIKSDVWSFGILLTELTTKGR 202

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 115/227 (50%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQ-IEIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G+ G+V      GI + K  + + +AVK L+ D  EK   + ++E+   K+IG
Sbjct: 39  LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++ E    G L  +L    +RP  ++             
Sbjct: 99  K--HKNIIHLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEEQM 154
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V     +ARG+ YL  +   + IH D+  +NVL+       N + KI+DFG+++ 
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT-----ENNVMKIADFGLARD 206
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           +N  D  +  TN R  + ++APE L +   T + DV+SFGV++ EI 
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 115/227 (50%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQ-IEIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G+ G+V      GI + K  + + +AVK L+ D  EK   + ++E+   K+IG
Sbjct: 39  LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++ E    G L  +L    +RP  ++             
Sbjct: 99  K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEEQM 154
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V     +ARG+ YL  +   + IH D+  +NVL+       N + KI+DFG+++ 
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT-----ENNVMKIADFGLARD 206
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           +N  D  +  TN R  + ++APE L +   T + DV+SFGV++ EI 
Sbjct: 207 INNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+ G     +    +A+K L K    + E F+ E +++ +  H+ LV+L   
Sbjct: 26  LGQGCFGEVWMGTW---NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            SEE    +V E M  G+L +FL  E G+     Q V++A  +A G+ Y+        +H
Sbjct: 82  VSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D++  N+L+       N + K++DFG+++L+  ++       +  + + APE       
Sbjct: 138 RDLRAANILVG-----ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 675 TTKVDVFSFGVMLLEIICGRR 695
           T K DV+SFG++L E+    R
Sbjct: 193 TIKSDVWSFGILLTELTTKGR 213

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+ G     +    +A+K L K    + E F+ E +++ +  H+ LV+L   
Sbjct: 17  LGQGCFGEVWMGTW---NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            SEE    +V E M  G+L +FL  E G+     Q V++A  +A G+ Y+        +H
Sbjct: 73  VSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 128
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D++  N+L+       N + K++DFG+++L+  ++       +  + + APE       
Sbjct: 129 RDLRAANILVG-----ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 183
Query: 675 TTKVDVFSFGVMLLEIICGRR 695
           T K DV+SFG++L E+    R
Sbjct: 184 TIKSDVWSFGILLTELTTKGR 204

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 17/203 (8%)
Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKK-LEKDIEKTNEEF-MTELKIIGRTHHKNLVRL 552
           LVG GS G V +   R KDT   +A+KK LE D +K  ++  M E+K++ +  H+NLV L
Sbjct: 32  LVGEGSYGMVMK--CRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNL 89
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNF-LFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L  C ++ +  LV+E + +  L +  LF  G     VQ+    +    G  + H      
Sbjct: 90  LEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH-----N 144
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL-R 670
           IIH DIKP+N+L     +  + + K+ DFG ++ L       D  +  T  Y APE L  
Sbjct: 145 IIHRDIKPENIL-----VSQSGVVKLCDFGFARTLAAPGEVYDDEV-ATRWYRAPELLVG 198
Query: 671 NVPVTTKVDVFSFGVMLLEIICG 693
           +V     VDV++ G ++ E+  G
Sbjct: 199 DVKYGKAVDVWAIGCLVTEMFMG 221

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+ G     +    +A+K L K    + E F+ E +++ +  H+ LV+L   
Sbjct: 26  LGQGCFGEVWMGTW---NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            SEE    +V E M  G+L +FL  E G+     Q V++A  +A G+ Y+        +H
Sbjct: 82  VSEEPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D++  N+L+       N + K++DFG+++L+  ++       +  + + APE       
Sbjct: 138 RDLRAANILVG-----ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 675 TTKVDVFSFGVMLLEI 690
           T K DV+SFG++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 114/211 (54%), Gaps = 13/211 (6%)
Query: 485 LQEATKGFSKLVGTGSSGKVYRGIL--RLKDTQIEIAVKKLEKDIE-KTNEEFMTELKII 541
           L+E      K++G+G+ G VY+GI     ++ +I +A+K L ++   K N+E + E  ++
Sbjct: 14  LKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVM 73
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
                  + RLLG C     +L V +LMP G L + +     R G    +   + +A+G+
Sbjct: 74  AGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGM 132
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGT 660
            YL +    +++H D+  +NVL+       N++ KI+DFG+++LL+ D+T    +  +  
Sbjct: 133 SYLED---VRLVHRDLAARNVLVK----SPNHV-KITDFGLARLLDIDETEYHADGGKVP 184
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++A E +     T + DV+S+GV + E++
Sbjct: 185 IKWMALESILRRRFTHQSDVWSYGVTVWELM 215

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E+   T    + +G G  G+V+ G     +   ++AVK L K    + + F+ E  ++ +
Sbjct: 5   EVPRETLKLVERLGAGQFGEVWMGYY---NGHTKVAVKSL-KQGSMSPDAFLAEANLMKQ 60
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLL 602
             H+ LVRL    ++E    ++ E M NG+L +FL    G +    + +++A  +A G+ 
Sbjct: 61  LQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 119
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           ++ E      IH +++  N+L+     DT    KI+DFG+++L+  ++       +  + 
Sbjct: 120 FIEER---NYIHRNLRAANILVS----DT-LSCKIADFGLARLIEDNEYTAREGAKFPIK 171
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           + APE +     T K DV+SFG++L EI+   R
Sbjct: 172 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 204

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 14/196 (7%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+ G     +    +A+K L K    + E F+ E +++ +  H+ LV+L   
Sbjct: 26  LGQGCFGEVWMGTW---NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            SEE    +V E M  G L +FL  E G+     Q V++A  +A G+ Y+        +H
Sbjct: 82  VSEEPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D++  N+L+       N + K++DFG+++L+  ++       +  + + APE       
Sbjct: 138 RDLRAANILVG-----ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 675 TTKVDVFSFGVMLLEI 690
           T K DV+SFG++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 17/203 (8%)
Query: 495 LVGTGSSGKVYRGILRLKD--TQIEIAVKKLEKDIEKTNE--EFMTELKIIGRTHHKNLV 550
           ++G GS G+V    L+ KD  TQ E AVK + K   K  +    + E++++ +  H N++
Sbjct: 29  MLGKGSFGEV----LKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           +L     +     +V EL   G L + +    +R        I   V  G+ Y+H+    
Sbjct: 85  KLFEILEDSSSFYIVGELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKH--- 140
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
            I+H D+KP+N+LL+ K  D +   KI DFG+S    ++    D    GT  Y+APE LR
Sbjct: 141 NIVHRDLKPENILLESKEKDCD--IKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPEVLR 196
Query: 671 NVPVTTKVDVFSFGVMLLEIICG 693
                 K DV+S GV+L  ++ G
Sbjct: 197 GT-YDEKCDVWSAGVILYILLSG 218

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 115/227 (50%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQ-IEIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G+ G+V      GI + K  + + +AVK L+ D  EK   + ++E+   K+IG
Sbjct: 39  LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++ E    G L  +L    +RP  ++             
Sbjct: 99  K--HKNIITLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEEQM 154
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V     +ARG+ YL  +   + IH D+  +NVL+       N + KI+DFG+++ 
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT-----ENNVMKIADFGLARD 206
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           +N  D  +  TN R  + ++APE L +   T + DV+SFGV++ EI 
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 17/203 (8%)
Query: 495 LVGTGSSGKVYRGILRLKD--TQIEIAVKKLEKDIEKTNE--EFMTELKIIGRTHHKNLV 550
           ++G GS G+V    L+ KD  TQ E AVK + K   K  +    + E++++ +  H N++
Sbjct: 29  MLGKGSFGEV----LKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           +L     +     +V EL   G L + +    +R        I   V  G+ Y+H+    
Sbjct: 85  KLFEILEDSSSFYIVGELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKH--- 140
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
            I+H D+KP+N+LL+ K  D +   KI DFG+S    ++    D    GT  Y+APE LR
Sbjct: 141 NIVHRDLKPENILLESKEKDCD--IKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPEVLR 196
Query: 671 NVPVTTKVDVFSFGVMLLEIICG 693
                 K DV+S GV+L  ++ G
Sbjct: 197 GT-YDEKCDVWSAGVILYILLSG 218

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 109/202 (53%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 25  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L++ +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 85  RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 140
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  + ++A E +
Sbjct: 141 RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELM 217

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 109/202 (53%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 23  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L++ +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 83  RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 138
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  + ++A E +
Sbjct: 139 RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELM 215

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 112/211 (53%), Gaps = 13/211 (6%)
Query: 485 LQEATKGFSKLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKII 541
           L+E      K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++
Sbjct: 13  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
               + ++ RLLG C     +L++ +LMP G L +++       G    +   + +A+G+
Sbjct: 73  ASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 131
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGT 660
            YL +    +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  
Sbjct: 132 NYLEDR---RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++A E + +   T + DV+S+GV + E++
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELM 214

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 112/211 (53%), Gaps = 13/211 (6%)
Query: 485 LQEATKGFSKLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKII 541
           L+E      K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++
Sbjct: 13  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
               + ++ RLLG C     +L++ +LMP G L +++       G    +   + +A+G+
Sbjct: 73  ASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGM 131
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGT 660
            YL +    +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  
Sbjct: 132 NYLEDR---RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++A E + +   T + DV+S+GV + E++
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELM 214

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 114/227 (50%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQ-IEIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G  G+V      GI + K  + + +AVK L+ D  EK   + ++E+   K+IG
Sbjct: 31  LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 90
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++ E    G L  +L    +RP  ++             
Sbjct: 91  K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEEQM 146
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V     +ARG+ YL  +   + IH D+  +NVL+       N + KI+DFG+++ 
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT-----ENNVMKIADFGLARD 198
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           +N  D  +  TN R  + ++APE L +   T + DV+SFGV++ EI 
Sbjct: 199 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 245

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 14/196 (7%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+ G     +    +A+K L K    + E F+ E +++ +  H+ LV+L   
Sbjct: 26  LGQGCFGEVWMGTW---NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            SEE    +V E M  G L +FL  E G+     Q V++A  +A G+ Y+        +H
Sbjct: 82  VSEEPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D++  N+L+       N + K++DFG+++L+  ++       +  + + APE       
Sbjct: 138 RDLRAANILVG-----ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 675 TTKVDVFSFGVMLLEI 690
           T K DV+SFG++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 113/218 (51%), Gaps = 20/218 (9%)
Query: 485 LQEATKGFS------KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEE-FM 535
           +Q +T  FS      +++G GS G+V   + + K T  E AVK + K    +KT++E  +
Sbjct: 23  VQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLL 80
Query: 536 TELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL 595
            E++++ +  H N+++L  F  ++    LV E+   G L + +    +R   V    I  
Sbjct: 81  REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR-KRFSEVDAARIIR 139
Query: 596 GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT 655
            V  G+ Y+H+    +I+H D+KP+N+LL+ K+ D N   +I DFG+S      +   D 
Sbjct: 140 QVLSGITYMHK---NKIVHRDLKPENLLLESKSKDAN--IRIIDFGLSTHFEASKKMKDK 194
Query: 656 NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
              GT  Y+APE L       K DV+S GV+L  ++ G
Sbjct: 195 I--GTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 229

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 112/211 (53%), Gaps = 13/211 (6%)
Query: 485 LQEATKGFSKLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKII 541
           L+E      K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++
Sbjct: 12  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
               + ++ RLLG C     +L++ +LMP G L +++       G    +   + +A+G+
Sbjct: 72  ASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGT 660
            YL +    +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  
Sbjct: 131 NYLEDR---RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++A E + +   T + DV+S+GV + E++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELM 213

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 117/227 (51%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQI-EIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G+ G+V      G+ + K  ++ ++AVK L+ D  EK   + ++E+   K+IG
Sbjct: 32  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++ E    G L  +L  + + P  ++             
Sbjct: 92  K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--QAREPPGLEYSYNPSHNPEEQL 147
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V  A  VARG+ YL      + IH D+  +NVL+     + N M KI+DFG+++ 
Sbjct: 148 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLV----TEDNVM-KIADFGLARD 199
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           ++  D  +  TN R  + ++APE L +   T + DV+SFGV+L EI 
Sbjct: 200 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 246

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 107/204 (52%), Gaps = 14/204 (6%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEE-FMTELKIIGRTHHKNL 549
            +++G GS G+V   + + K T  E AVK + K    +KT++E  + E++++ +  H N+
Sbjct: 54  QRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 111
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           ++L  F  ++    LV E+   G L + +    +R   V    I   V  G+ Y+H+   
Sbjct: 112 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMHK--- 167
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
            +I+H D+KP+N+LL+ K+ D N   +I DFG+S      +   D    GT  Y+APE L
Sbjct: 168 NKIVHRDLKPENLLLESKSKDAN--IRIIDFGLSTHFEASKKMKDKI--GTAYYIAPEVL 223
Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
                  K DV+S GV+L  ++ G
Sbjct: 224 HGT-YDEKCDVWSTGVILYILLSG 246

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 113/218 (51%), Gaps = 20/218 (9%)
Query: 485 LQEATKGFS------KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEE-FM 535
           +Q +T  FS      +++G GS G+V   + + K T  E AVK + K    +KT++E  +
Sbjct: 17  VQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLL 74
Query: 536 TELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL 595
            E++++ +  H N+++L  F  ++    LV E+   G L + +    +R   V    I  
Sbjct: 75  REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR-KRFSEVDAARIIR 133
Query: 596 GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT 655
            V  G+ Y+H+    +I+H D+KP+N+LL+ K+ D N   +I DFG+S      +   D 
Sbjct: 134 QVLSGITYMHK---NKIVHRDLKPENLLLESKSKDAN--IRIIDFGLSTHFEASKKMKDK 188
Query: 656 NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
              GT  Y+APE L       K DV+S GV+L  ++ G
Sbjct: 189 I--GTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 223

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 107/204 (52%), Gaps = 14/204 (6%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEE-FMTELKIIGRTHHKNL 549
            +++G GS G+V   + + K T  E AVK + K    +KT++E  + E++++ +  H N+
Sbjct: 55  QRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 112
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           ++L  F  ++    LV E+   G L + +    +R   V    I   V  G+ Y+H+   
Sbjct: 113 MKLYEFFEDKGYFYLVGEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMHK--- 168
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
            +I+H D+KP+N+LL+ K+ D N   +I DFG+S      +   D    GT  Y+APE L
Sbjct: 169 NKIVHRDLKPENLLLESKSKDAN--IRIIDFGLSTHFEASKKMKDKI--GTAYYIAPEVL 224
Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
                  K DV+S GV+L  ++ G
Sbjct: 225 HGT-YDEKCDVWSTGVILYILLSG 247

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 26/207 (12%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-------EKTNEEFMTELKIIGRTHH 546
           + +GTGS G+V+  ++R +      A+K L+K+I       E TN+E +  L I+    H
Sbjct: 12  RTLGTGSFGRVH--LIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLM-LSIVT---H 65
Query: 547 KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE 606
             ++R+ G   +  +  ++ + +  G L + L    + P  V +   A  V   L YLH 
Sbjct: 66  PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLHS 124
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
           +    II+ D+KP+N+LLD      N   KI+DFG +K +  D T     + GT  Y+AP
Sbjct: 125 K---DIIYRDLKPENILLD-----KNGHIKITDFGFAKYV-PDVTYX---LCGTPDYIAP 172
Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICG 693
           E +   P    +D +SFG+++ E++ G
Sbjct: 173 EVVSTKPYNKSIDWWSFGILIYEMLAG 199

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 109/202 (53%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 24  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L++ +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 84  RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 139
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  + ++A E +
Sbjct: 140 RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELM 216

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+ G     +    +A+K L K    + E F+ E +++ +  H+ LV+L   
Sbjct: 26  LGQGCFGEVWMGTW---NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            SEE    +V E M  G+L +FL  E G+     Q V++A  +A G+ Y+        +H
Sbjct: 82  VSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+   N+L+       N + K++DFG+++L+  ++       +  + + APE       
Sbjct: 138 RDLAAANILVG-----ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 675 TTKVDVFSFGVMLLEIICGRR 695
           T K DV+SFG++L E+    R
Sbjct: 193 TIKSDVWSFGILLTELTTKGR 213

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 108/202 (53%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 23  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L+  +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 83  RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 138
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  + ++A E +
Sbjct: 139 RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELM 215

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 111/211 (52%), Gaps = 13/211 (6%)
Query: 485 LQEATKGFSKLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKII 541
           L+E      K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++
Sbjct: 12  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
               + ++ RLLG C     +L+  +LMP G L +++       G    +   + +A+G+
Sbjct: 72  ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGT 660
            YL +    +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  
Sbjct: 131 NYLEDR---RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++A E + +   T + DV+S+GV + E++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELM 213

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 108/202 (53%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 27  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L+  +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 87  RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 142
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  + ++A E +
Sbjct: 143 RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 198 LHRIYTHQSDVWSYGVTVWELM 219

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 108/202 (53%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 24  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L+  +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 84  RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 139
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  + ++A E +
Sbjct: 140 RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELM 216

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 114/226 (50%), Gaps = 39/226 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQ-IEIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G  G+V      GI + K  + + +AVK L+ D  EK   + ++E+   K+IG
Sbjct: 85  LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 144
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++ E    G L  +L    +RP  ++             
Sbjct: 145 K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEEQM 200
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V     +ARG+ YL  +   + IH D+  +NVL+       N + KI+DFG+++ 
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT-----ENNVMKIADFGLARD 252
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
           +N  D  +  TN R  + ++APE L +   T + DV+SFGV++ EI
Sbjct: 253 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 108/202 (53%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L+  +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 81  RLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 136
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  + ++A E +
Sbjct: 137 RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELM 213

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 114/227 (50%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQ-IEIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G  G+V      GI + K  + + +AVK L+ D  EK   + ++E+   K+IG
Sbjct: 28  LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 87
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++ E    G L  +L    +RP  ++             
Sbjct: 88  K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEEQM 143
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V     +ARG+ YL  +   + IH D+  +NVL+       N + KI+DFG+++ 
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT-----ENNVMKIADFGLARD 195
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           +N  D  +  TN R  + ++APE L +   T + DV+SFGV++ EI 
Sbjct: 196 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 242

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 114/227 (50%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQ-IEIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G  G+V      GI + K  + + +AVK L+ D  EK   + ++E+   K+IG
Sbjct: 26  LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 85
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++ E    G L  +L    +RP  ++             
Sbjct: 86  K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEEQM 141
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V     +ARG+ YL  +   + IH D+  +NVL+       N + KI+DFG+++ 
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVT-----ENNVMKIADFGLARD 193
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           +N  D  +  TN R  + ++APE L +   T + DV+SFGV++ EI 
Sbjct: 194 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 240

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 108/202 (53%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 24  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L+  +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 84  RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 139
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  + ++A E +
Sbjct: 140 RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELM 216

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 111/211 (52%), Gaps = 13/211 (6%)
Query: 485 LQEATKGFSKLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKII 541
           L+E      K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++
Sbjct: 6   LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 65
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
               + ++ RLLG C     +L+  +LMP G L +++       G    +   + +A+G+
Sbjct: 66  ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 124
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGT 660
            YL +    +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  
Sbjct: 125 NYLEDR---RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++A E + +   T + DV+S+GV + E++
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELM 207

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 108/202 (53%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 24  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L+  +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 84  RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 139
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  + ++A E +
Sbjct: 140 RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELM 216

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 108/202 (53%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 28  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L+  +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 88  RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 143
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  + ++A E +
Sbjct: 144 RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELM 220

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 115/227 (50%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQ-IEIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G+ G+V      GI + K  + + +AVK L+ D  EK   + ++E+   K+IG
Sbjct: 39  LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++ E    G L  +L    +RP  ++             
Sbjct: 99  K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEEQM 154
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V     +ARG+ YL  +   + IH D+  +NVL+       N + +I+DFG+++ 
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT-----ENNVMRIADFGLARD 206
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           +N  D  +  TN R  + ++APE L +   T + DV+SFGV++ EI 
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 108/202 (53%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 46  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L+  +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 106 RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 161
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  + ++A E +
Sbjct: 162 RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 216
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 217 LHRIYTHQSDVWSYGVTVWELM 238

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 105/213 (49%), Gaps = 14/213 (6%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E+   +    K +G G  G+V+       +   ++AVK + K    + E F+ E  ++  
Sbjct: 11  EIPRESLKLEKKLGAGQFGEVWMATY---NKHTKVAVKTM-KPGSMSVEAFLAEANVMKT 66
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLL 602
             H  LV+L    ++E    ++ E M  G+L +FL   EG +    + ++ +  +A G+ 
Sbjct: 67  LQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 125
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           ++ +      IH D++  N+L+       + + KI+DFG+++++  ++       +  + 
Sbjct: 126 FIEQR---NYIHRDLRAANILVS-----ASLVCKIADFGLARVIEDNEYTAREGAKFPIK 177
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           + APE +     T K DV+SFG++L+EI+   R
Sbjct: 178 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 210

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 111/211 (52%), Gaps = 13/211 (6%)
Query: 485 LQEATKGFSKLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKII 541
           L+E      K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++
Sbjct: 22  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 81
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
               + ++ RLLG C     +L+  +LMP G L +++       G    +   + +A+G+
Sbjct: 82  ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 140
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGT 660
            YL +    +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  
Sbjct: 141 NYLEDR---RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 192
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++A E + +   T + DV+S+GV + E++
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELM 223

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 106/213 (49%), Gaps = 14/213 (6%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E+   +    K +G G  G+V+   +   +   ++AVK + K    + E F+ E  ++  
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVW---MATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKT 239
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLL 602
             H  LV+L    ++E    ++ E M  G+L +FL   EG +    + ++ +  +A G+ 
Sbjct: 240 LQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 298
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           ++ +      IH D++  N+L+       + + KI+DFG+++++  ++       +  + 
Sbjct: 299 FIEQR---NYIHRDLRAANILVS-----ASLVCKIADFGLARVIEDNEYTAREGAKFPIK 350
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           + APE +     T K DV+SFG++L+EI+   R
Sbjct: 351 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 383

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 27/206 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R + ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 20  LGKGKFGNVY--LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 78  YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL------ANALSYCHSK 131
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +N   KI+DFG S  ++   +R DT + GT+ Y+ PE
Sbjct: 132 ---RVIHRDIKPENLLLG-----SNGELKIADFGWS--VHAPSSRRDT-LCGTLDYLPPE 180
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            +       KVD++S GV+  E + G
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVG 206

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 17/203 (8%)
Query: 495 LVGTGSSGKVYRGILRLKD--TQIEIAVKKLEKDIEKTNE--EFMTELKIIGRTHHKNLV 550
           ++G GS G+V    L+ KD  TQ E AVK + K   K  +    + E++++ +  H N++
Sbjct: 29  MLGKGSFGEV----LKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           +L     +     +V EL   G L + +    +R        I   V  G+ Y+H+    
Sbjct: 85  KLFEILEDSSSFYIVGELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKH--- 140
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
            I+H D+KP+N+LL+ K  D +   KI DFG+S    ++    D    GT  Y+APE LR
Sbjct: 141 NIVHRDLKPENILLESKEKDCD--IKIIDFGLSTCFQQNTKMKDR--IGTAYYIAPEVLR 196
Query: 671 NVPVTTKVDVFSFGVMLLEIICG 693
                 K DV+S GV+L  ++ G
Sbjct: 197 GT-YDEKCDVWSAGVILYILLSG 218

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 136/305 (44%), Gaps = 50/305 (16%)
Query: 492 FSKLVGTGSSGKVYRGILR--LKDT-QIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHK 547
            S+ +G GS G VY G+ +  +KD  +  +A+K + E    +   EF+ E  ++   +  
Sbjct: 16  MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR---------PGWVQRVEIALGVA 598
           ++VRLLG  S+    L++ ELM  G L ++L               P   + +++A  +A
Sbjct: 76  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR 658
            G+ YL+     + +H D+  +N       +  ++  KI DFG++    +D   TD   +
Sbjct: 136 DGMAYLN---ANKFVHRDLAARNC-----XVAEDFTVKIGDFGMT----RDIYETDYYRK 183
Query: 659 GTMG-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXX 713
           G  G     +++PE L++   TT  DV+SFGV+L EI                       
Sbjct: 184 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-------- 235
Query: 714 XXWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG 773
              V+  ++   L     + P++L +L R          C   +P +RPS  ++I  ++ 
Sbjct: 236 ---VLRFVMEGGLLDKPDNCPDMLLELMRM---------CWQYNPKMRPSFLEIISSIKE 283
Query: 774 TLEVG 778
            +E G
Sbjct: 284 EMEPG 288

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 108/202 (53%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L+  +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 81  RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 136
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  + ++A E +
Sbjct: 137 RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELM 213

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 113/229 (49%), Gaps = 43/229 (18%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQ-IEIAVKKLEKDIEKTNEEF------MTELKI 540
             K +G G+ G+V      GI + K  + + +AVK L+ D   T E+       M  +K+
Sbjct: 39  LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEEDLSDLVSEMEMMKM 96
Query: 541 IGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR---------- 590
           IG+  HKN++ LLG C+++    ++ E    G L  +L    +RP  ++           
Sbjct: 97  IGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYL--RARRPPGMEYSYDINRVPEE 152
Query: 591 -------VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS 643
                  V     +ARG+ YL  +   + IH D+  +NVL+       N + KI+DFG++
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT-----ENNVMKIADFGLA 204
Query: 644 KLLNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + +N  D  +  TN R  + ++APE L +   T + DV+SFGV++ EI 
Sbjct: 205 RDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS+G V   I  ++ +   +AVKK++   ++  E    E+ I+    H+N+V +   
Sbjct: 32  IGEGSTGIVC--IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 89
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               D+  +V E +  G L++ + H   R    Q   + L V + L  LH +    +IH 
Sbjct: 90  YLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 144
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  ++LL   T D     K+SDFG    ++K+  R    + GT  ++APE +  +P  
Sbjct: 145 DIKSDSILL---THDGR--VKLSDFGFCAQVSKEVPRRKX-LVGTPYWMAPELISRLPYG 198
Query: 676 TKVDVFSFGVMLLEIICG 693
            +VD++S G+M++E++ G
Sbjct: 199 PEVDIWSLGIMVIEMVDG 216

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 11/202 (5%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F +++G+G+  +V+  +++ + T    A+K ++K     +     E+ ++ +  H+N+V 
Sbjct: 13  FMEVLGSGAFSEVF--LVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVT 70
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L           LV +L+  G L + +   G        + I   V   + YLHE     
Sbjct: 71  LEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ-QVLSAVKYLHE---NG 126
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           I+H D+KP+N+L    T + N    I+DFG+SK+   +Q    +   GT GYVAPE L  
Sbjct: 127 IVHRDLKPENLLY--LTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQ 181
Query: 672 VPVTTKVDVFSFGVMLLEIICG 693
            P +  VD +S GV+   ++CG
Sbjct: 182 KPYSKAVDCWSIGVITYILLCG 203

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS+G V   I  ++ +   +AVKK++   ++  E    E+ I+    H+N+V +   
Sbjct: 39  IGEGSTGIVC--IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 96
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               D+  +V E +  G L++ + H   R    Q   + L V + L  LH +    +IH 
Sbjct: 97  YLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 151
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  ++LL   T D     K+SDFG    ++K+  R    + GT  ++APE +  +P  
Sbjct: 152 DIKSDSILL---THDGR--VKLSDFGFCAQVSKEVPRRKX-LVGTPYWMAPELISRLPYG 205
Query: 676 TKVDVFSFGVMLLEIICG 693
            +VD++S G+M++E++ G
Sbjct: 206 PEVDIWSLGIMVIEMVDG 223

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+ G     +    +A+K L K    + E F+ E +++ +  H+ LV+L   
Sbjct: 23  LGQGCFGEVWMGTW---NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            SEE    +V E M  G+L +FL  E G+     Q V+++  +A G+ Y+        +H
Sbjct: 79  VSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVH 134
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D++  N+L+       N + K++DFG+++L+  ++       +  + + APE       
Sbjct: 135 RDLRAANILVG-----ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 189
Query: 675 TTKVDVFSFGVMLLEIICGRR 695
           T K DV+SFG++L E+    R
Sbjct: 190 TIKSDVWSFGILLTELTTKGR 210

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS+G V   I  ++ +   +AVKK++   ++  E    E+ I+    H+N+V +   
Sbjct: 28  IGEGSTGIVC--IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 85
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               D+  +V E +  G L++ + H   R    Q   + L V + L  LH +    +IH 
Sbjct: 86  YLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 140
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  ++LL   T D     K+SDFG    ++K+  R    + GT  ++APE +  +P  
Sbjct: 141 DIKSDSILL---THDGR--VKLSDFGFCAQVSKEVPRRKX-LVGTPYWMAPELISRLPYG 194
Query: 676 TKVDVFSFGVMLLEIICG 693
            +VD++S G+M++E++ G
Sbjct: 195 PEVDIWSLGIMVIEMVDG 212

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+ G     +    +A+K L K    + E F+ E +++ +  H+ LV+L   
Sbjct: 23  LGQGCFGEVWMGTW---NGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
            SEE    +V E M  G+L +FL  E G+     Q V+++  +A G+ Y+        +H
Sbjct: 79  VSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVH 134
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D++  N+L+       N + K++DFG+++L+  ++       +  + + APE       
Sbjct: 135 RDLRAANILVG-----ENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRF 189
Query: 675 TTKVDVFSFGVMLLEIICGRR 695
           T K DV+SFG++L E+    R
Sbjct: 190 TIKSDVWSFGILLTELTTKGR 210

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS+G V   I  ++ +   +AVKK++   ++  E    E+ I+    H+N+V +   
Sbjct: 37  IGEGSTGIVC--IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 94
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               D+  +V E +  G L++ + H   R    Q   + L V + L  LH +    +IH 
Sbjct: 95  YLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 149
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  ++LL   T D     K+SDFG    ++K+  R    + GT  ++APE +  +P  
Sbjct: 150 DIKSDSILL---THDGR--VKLSDFGFCAQVSKEVPRRKX-LVGTPYWMAPELISRLPYG 203
Query: 676 TKVDVFSFGVMLLEIICG 693
            +VD++S G+M++E++ G
Sbjct: 204 PEVDIWSLGIMVIEMVDG 221

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS+G V   I  ++ +   +AVKK++   ++  E    E+ I+    H+N+V +   
Sbjct: 82  IGEGSTGIVC--IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 139
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               D+  +V E +  G L++ + H   R    Q   + L V + L  LH +    +IH 
Sbjct: 140 YLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 194
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  ++LL   T D     K+SDFG    ++K+  R    + GT  ++APE +  +P  
Sbjct: 195 DIKSDSILL---THDGR--VKLSDFGFCAQVSKEVPRRKX-LVGTPYWMAPELISRLPYG 248
Query: 676 TKVDVFSFGVMLLEIICG 693
            +VD++S G+M++E++ G
Sbjct: 249 PEVDIWSLGIMVIEMVDG 266

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 110/211 (52%), Gaps = 13/211 (6%)
Query: 485 LQEATKGFSKLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKII 541
           L+E      K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++
Sbjct: 9   LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 68
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
               + ++ RLLG C     +L+  +LMP G L +++       G    +   + +A G+
Sbjct: 69  ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGM 127
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGT 660
            YL +    +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  
Sbjct: 128 NYLEDR---RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 179
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++A E + +   T + DV+S+GV + E++
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELM 210

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 17  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 75  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 128
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R DT + GT+ Y+ PE
Sbjct: 129 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRRDT-LCGTLDYLPPE 177
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 106/206 (51%), Gaps = 18/206 (8%)
Query: 494 KLVGTGSSGKVYRG-ILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVR 551
           +++G G  G VY G  +     +I+ A+K L +  E    E F+ E  ++   +H N++ 
Sbjct: 27  RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 552 LLGFCSEEDKRLLVYELMP---NGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           L+G     +   L + L+P   +G L  F+    + P     +   L VARG+ YL    
Sbjct: 87  LIGIMLPPEG--LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---A 141
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK-LLNKD--QTRTDTNMRGTMGYVA 665
           E + +H D+  +N +LD      ++  K++DFG+++ +L+++    +   + R  + + A
Sbjct: 142 EQKFVHRDLAARNCMLD-----ESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTA 196
Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEII 691
            E L+    TTK DV+SFGV+L E++
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELL 222

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 139/304 (45%), Gaps = 52/304 (17%)
Query: 496 VGTGSSGKVYRGILR---LKDTQIEIAVKKLEKDIE-KTNEEFMTELKII-GRTHHKNLV 550
           +G GS G VY G  R     + +  +AVK + +    +   EF+ E  ++ G T H ++V
Sbjct: 25  LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH-HVV 83
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLF--------HEGQRPGWVQR-VEIALGVARGL 601
           RLLG  S+    L+V ELM +G L ++L         + G+ P  +Q  +++A  +A G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL+ +   + +H D+  +N +     +  ++  KI DFG++    +D   T    +G  
Sbjct: 144 AYLNAK---KFVHRDLAARNCM-----VAHDFTVKIGDFGMT----RDIYETAYYRKGGK 191
Query: 662 G-----YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXXXXW 716
           G     ++APE L++   TT  D++SFGV+L EI                          
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-----------LAEQPYQGLSNEQ 240
Query: 717 VISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE 776
           V+  ++         + PE ++DL R          C   +P +RP+  +++++L+  L 
Sbjct: 241 VLKFVMDGGYLDQPDNCPERVTDLMRM---------CWQFNPKMRPTFLEIVNLLKDDLH 291
Query: 777 VGMP 780
              P
Sbjct: 292 PSFP 295

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS+G V   I  ++ +   +AVKK++   ++  E    E+ I+    H+N+V +   
Sbjct: 159 IGEGSTGIVC--IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 216
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               D+  +V E +  G L++ + H   R    Q   + L V + L  LH +    +IH 
Sbjct: 217 YLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQG---VIHR 271
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  ++LL   T D     K+SDFG    ++K+  R    + GT  ++APE +  +P  
Sbjct: 272 DIKSDSILL---THDGR--VKLSDFGFCAQVSKEVPRRKX-LVGTPYWMAPELISRLPYG 325
Query: 676 TKVDVFSFGVMLLEIICG 693
            +VD++S G+M++E++ G
Sbjct: 326 PEVDIWSLGIMVIEMVDG 343

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQ-IEIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G+ G+V      GI + K  + + +AVK L+ D  EK   + ++E+   K+IG
Sbjct: 39  LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++      G L  +L    +RP  ++             
Sbjct: 99  K--HKNIINLLGACTQDGPLYVIVAYASKGNLREYL--RARRPPGMEYSYDINRVPEEQM 154
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V     +ARG+ YL  +   + IH D+  +NVL+       N + KI+DFG+++ 
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT-----ENNVMKIADFGLARD 206
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           +N  D  +  TN R  + ++APE L +   T + DV+SFGV++ EI 
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 110/218 (50%), Gaps = 21/218 (9%)
Query: 482 FQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE---FMTEL 538
           FQ L +  +   KL G+G+ G+V   + + K T  E A+K ++K    T       + E+
Sbjct: 16  FQGLSDRYQRVKKL-GSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEV 72
Query: 539 KIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVA 598
            ++ +  H N+++L  F  ++    LV E+   G L + +    Q+   V    I   V 
Sbjct: 73  AVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR-QKFSEVDAAVIMKQVL 131
Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS---KLLNKDQTRTDT 655
            G  YLH+     I+H D+KP+N+LL+ K+ D   + KI DFG+S   ++  K + R   
Sbjct: 132 SGTTYLHKH---NIVHRDLKPENLLLESKSRDA--LIKIVDFGLSAHFEVGGKMKERL-- 184
Query: 656 NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
              GT  Y+APE LR      K DV+S GV+L  ++CG
Sbjct: 185 ---GTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 218

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 111/211 (52%), Gaps = 13/211 (6%)
Query: 485 LQEATKGFSKLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKII 541
           L+E      K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++
Sbjct: 16  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 75
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
               + ++ RLLG C     +L++ +LMP G L +++       G    +   + +A+G+
Sbjct: 76  ASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 134
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGT 660
            YL +    +++H D+  +NVL     + T    KI+DFG +KLL  ++        +  
Sbjct: 135 NYLEDR---RLVHRDLAARNVL-----VKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 186
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++A E + +   T + DV+S+GV + E++
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELM 217

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 108/202 (53%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 23  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L++ +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 83  RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 138
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL     + T    KI+DFG +KLL  ++        +  + ++A E +
Sbjct: 139 RLVHRDLAARNVL-----VKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELM 215

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 108/202 (53%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 23  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L++ +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 83  RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 138
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL     + T    KI+DFG +KLL  ++        +  + ++A E +
Sbjct: 139 RLVHRDLAARNVL-----VKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELM 215

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 111/218 (50%), Gaps = 20/218 (9%)
Query: 485 LQEATKGFS------KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEE-FM 535
           +Q +T  FS      +++G GS G+V   + + K T  E AVK + K    +KT++E  +
Sbjct: 17  VQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLL 74
Query: 536 TELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL 595
            E++++ +  H N+ +L  F  ++    LV E+   G L + +    +R   V    I  
Sbjct: 75  REVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISR-KRFSEVDAARIIR 133
Query: 596 GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT 655
            V  G+ Y H+    +I+H D+KP+N+LL+ K+ D N   +I DFG+S      +   D 
Sbjct: 134 QVLSGITYXHK---NKIVHRDLKPENLLLESKSKDAN--IRIIDFGLSTHFEASKKXKDK 188
Query: 656 NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
              GT  Y+APE L       K DV+S GV+L  ++ G
Sbjct: 189 I--GTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 223

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 107/202 (52%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 23  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L+  +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 83  RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 138
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL     + T    KI+DFG +KLL  ++        +  + ++A E +
Sbjct: 139 RLVHRDLAARNVL-----VKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELM 215

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 107/202 (52%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 28  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L+  +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 88  RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 143
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL     + T    KI+DFG +KLL  ++        +  + ++A E +
Sbjct: 144 RLVHRDLAARNVL-----VKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELM 220

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 117/255 (45%), Gaps = 41/255 (16%)
Query: 469 DPNSMEINFREFTFQ---ELQEATKGFSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKK 522
           D     ++FRE+ +    E       F K++G+G+ GKV       +      I++AVK 
Sbjct: 23  DNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKM 82
Query: 523 L-EKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-- 578
           L EK      E  M+ELK++ +   H+N+V LLG C+      L++E    G L N+L  
Sbjct: 83  LKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRS 142
Query: 579 ----FHEGQRPGWVQ-RVE---------------IALGVARGLLYLH-EECETQIIHCDI 617
               F E +     Q R+E                A  VA+G+ +L  + C    +H D+
Sbjct: 143 KREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDL 198
Query: 618 KPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTT 676
             +NVL     +    + KI DFG+++ +  D       N R  + ++APE L     T 
Sbjct: 199 AARNVL-----VTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI 253
Query: 677 KVDVFSFGVMLLEII 691
           K DV+S+G++L EI 
Sbjct: 254 KSDVWSYGILLWEIF 268

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 103/203 (50%), Gaps = 15/203 (7%)
Query: 496 VGTGSSGKVY--RGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRL 552
           +G G  GKV   R      +T  ++AVK L+ +    +  +   E++I+   +H+N+V+ 
Sbjct: 29  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 553 LGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
            G C+E+      L+ E +P+G+L  +L     +    Q+++ A+ + +G+ YL      
Sbjct: 89  KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR--- 145
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPEW 668
           Q +H D+  +NVL     +++ +  KI DFG++K +  +K+      +    + + APE 
Sbjct: 146 QYVHRDLAARNVL-----VESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 200
Query: 669 LRNVPVTTKVDVFSFGVMLLEII 691
           L         DV+SFGV L E++
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELL 223

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 43/252 (17%)
Query: 467 YFDPNSMEINFR-EFTFQELQEATKGFSKLVGTGSSGKVYR----GILRLKDTQIEIAVK 521
           Y DP  +  + + EF    L      F K +G G+ GKV      G+++  D  + +AVK
Sbjct: 6   YIDPTQLPYDHKWEFPRNRLS-----FGKTLGAGAFGKVVEATAYGLIK-SDAAMTVAVK 59
Query: 522 KLEKDIEKTNEE-FMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF 579
            L+     T  E  M+ELK++    +H N+V LLG C+     L++ E    G L NFL 
Sbjct: 60  MLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL- 118
Query: 580 HEGQRPGWV-------------------QRVEIALGVARGLLYLHEECETQIIHCDIKPQ 620
              +R  ++                     +  +  VA+G+ +L  +     IH D+  +
Sbjct: 119 -RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAAR 174
Query: 621 NVLLDLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVD 679
           N+L     L    + KI DFG+++ +  D       N R  + ++APE + N   T + D
Sbjct: 175 NIL-----LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD 229
Query: 680 VFSFGVMLLEII 691
           V+S+G+ L E+ 
Sbjct: 230 VWSYGIFLWELF 241

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 107/202 (52%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L+  +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 81  RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 136
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL     + T    KI+DFG +KLL  ++        +  + ++A E +
Sbjct: 137 RLVHRDLAARNVL-----VKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELM 213

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 39/227 (17%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQ-IEIAVKKLEKD-IEKTNEEFMTEL---KIIG 542
             K +G G+ G+V      GI + K  + + +AVK L+ D  EK   + ++E+   K+IG
Sbjct: 39  LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98
Query: 543 RTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------------ 590
           +  HKN++ LLG C+++    ++      G L  +L    +RP  ++             
Sbjct: 99  K--HKNIINLLGACTQDGPLYVIVGYASKGNLREYL--RARRPPGMEYSYDINRVPEEQM 154
Query: 591 -----VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                V     +ARG+ YL  +   + IH D+  +NVL+       N + KI+DFG+++ 
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT-----ENNVMKIADFGLARD 206
Query: 646 LNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           +N  D  +  TN R  + ++APE L +   T + DV+SFGV++ EI 
Sbjct: 207 INNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 496 VGTGSSGKVY--RGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRL 552
           +G G  GKV   R      +T  ++AVK L+ +    +  +   E++I+   +H+N+V+ 
Sbjct: 17  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 553 LGFCSEE--DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
            G C+E+  +   L+ E +P+G+L  +L     +    Q+++ A+ + +G+ YL      
Sbjct: 77  KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR--- 133
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPEW 668
           Q +H D+  +NVL     +++ +  KI DFG++K +  +K+      +    + + APE 
Sbjct: 134 QYVHRDLAARNVL-----VESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 188
Query: 669 LRNVPVTTKVDVFSFGVMLLEII 691
           L         DV+SFGV L E++
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELL 211

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 108/202 (53%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++ +G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 28  KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L++ +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 88  RLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 143
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  + ++A E +
Sbjct: 144 RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELM 220

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 42  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 153
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R D ++ GT+ Y+ PE
Sbjct: 154 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRRD-DLCGTLDYLPPE 202
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVGK 229

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 43/252 (17%)
Query: 467 YFDPNSMEINFR-EFTFQELQEATKGFSKLVGTGSSGKVYR----GILRLKDTQIEIAVK 521
           Y DP  +  + + EF    L      F K +G G+ GKV      G+++  D  + +AVK
Sbjct: 29  YIDPTQLPYDHKWEFPRNRLS-----FGKTLGAGAFGKVVEATAYGLIK-SDAAMTVAVK 82
Query: 522 KLEKDIEKTNEE-FMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF 579
            L+     T  E  M+ELK++    +H N+V LLG C+     L++ E    G L NFL 
Sbjct: 83  MLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL- 141
Query: 580 HEGQRPGWV-------------------QRVEIALGVARGLLYLHEECETQIIHCDIKPQ 620
              +R  ++                     +  +  VA+G+ +L  +     IH D+  +
Sbjct: 142 -RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAAR 197
Query: 621 NVLLDLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVD 679
           N+L     L    + KI DFG+++ +  D       N R  + ++APE + N   T + D
Sbjct: 198 NIL-----LTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD 252
Query: 680 VFSFGVMLLEII 691
           V+S+G+ L E+ 
Sbjct: 253 VWSYGIFLWELF 264

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 32/231 (13%)
Query: 472 SMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT 530
           +ME   R++  ++ +       + +G G  G VY  + R K ++  +A+K L K  +EK 
Sbjct: 2   AMESKKRQWALEDFE-----IGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKA 54
Query: 531 --NEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQ 583
               +   E++I     H N++RL G+  +  +  L+ E  P GT+   L     F E +
Sbjct: 55  GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQR 114
Query: 584 RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS 643
              ++  +      A  L Y H +   ++IH DIKP+N+LL      +    KI+DFG S
Sbjct: 115 TATYITEL------ANALSYCHSK---RVIHRDIKPENLLLG-----SAGELKIADFGWS 160
Query: 644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
             ++   +R  T + GT+ Y+ PE +       KVD++S GV+  E + G+
Sbjct: 161 --VHAPSSRR-TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFM-TELKIIGRTHHKNLV 550
           F + +GTG+  +V   +   K T    AVK + K   K  E  +  E+ ++ +  H+N+V
Sbjct: 26  FKETLGTGAFSEVV--LAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL--GVARGLLYLHEEC 608
            L       +   LV +L+  G L + +  +G    + ++    L   V   + YLH   
Sbjct: 84  ALEDIYESPNHLYLVMQLVSGGELFDRIVEKG---FYTEKDASTLIRQVLDAVYYLHR-- 138
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
              I+H D+KP+N+L   +  ++  M  ISDFG+SK+  K    +     GT GYVAPE 
Sbjct: 139 -MGIVHRDLKPENLLYYSQDEESKIM--ISDFGLSKMEGKGDVMSTAC--GTPGYVAPEV 193
Query: 669 LRNVPVTTKVDVFSFGVMLLEIICG 693
           L   P +  VD +S GV+   ++CG
Sbjct: 194 LAQKPYSKAVDCWSIGVIAYILLCG 218

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 110/211 (52%), Gaps = 13/211 (6%)
Query: 485 LQEATKGFSKLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKII 541
           L+E      K++ +G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++
Sbjct: 12  LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
               + ++ RLLG C     +L+  +LMP G L +++       G    +   + +A+G+
Sbjct: 72  ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGT 660
            YL +    +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  
Sbjct: 131 NYLEDR---RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++A E + +   T + DV+S+GV + E++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELM 213

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 107/202 (52%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           K++ +G+ G VY+G  I   +  +I +A+K+L E    K N+E + E  ++    + ++ 
Sbjct: 28  KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L+  +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 88  RLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 143
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  + ++A E +
Sbjct: 144 RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
            +   T + DV+S+GV + E++
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELM 220

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 10/198 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +GTG+ G V+R   R   T    A K +    E   E    E++ +    H  LV L   
Sbjct: 165 LGTGAFGVVHRVTERA--TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
             ++++ +++YE M  G L   +  E  +    + VE    V +GL ++H   E   +H 
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHL 279
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           D+KP+N++   K  +     K+ DFG++  L+  Q+   T   GT  + APE     PV 
Sbjct: 280 DLKPENIMFTTKRSNE---LKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEGKPVG 334
Query: 676 TKVDVFSFGVMLLEIICG 693
              D++S GV+   ++ G
Sbjct: 335 YYTDMWSVGVLSYILLSG 352

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 27/206 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R + ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 20  LGKGKFGNVY--LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 78  YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL------ANALSYCHSK 131
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +N   KI+DFG S  ++   +R  T + GT+ Y+ PE
Sbjct: 132 ---RVIHRDIKPENLLLG-----SNGELKIADFGWS--VHAPSSRR-TTLCGTLDYLPPE 180
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            +       KVD++S GV+  E + G
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVG 206

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 43/252 (17%)
Query: 467 YFDPNSMEINFR-EFTFQELQEATKGFSKLVGTGSSGKVYR----GILRLKDTQIEIAVK 521
           Y DP  +  + + EF    L      F K +G G+ GKV      G+++  D  + +AVK
Sbjct: 24  YIDPTQLPYDHKWEFPRNRLS-----FGKTLGAGAFGKVVEATAYGLIK-SDAAMTVAVK 77
Query: 522 KLEKDIEKTNEE-FMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF 579
            L+     T  E  M+ELK++    +H N+V LLG C+     L++ E    G L NFL 
Sbjct: 78  MLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL- 136
Query: 580 HEGQRPGWV-------------------QRVEIALGVARGLLYLHEECETQIIHCDIKPQ 620
              +R  ++                     +  +  VA+G+ +L  +     IH D+  +
Sbjct: 137 -RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAAR 192
Query: 621 NVLLDLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVD 679
           N+L     L    + KI DFG+++ +  D       N R  + ++APE + N   T + D
Sbjct: 193 NIL-----LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD 247
Query: 680 VFSFGVMLLEII 691
           V+S+G+ L E+ 
Sbjct: 248 VWSYGIFLWELF 259

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 19  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 77  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 130
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R D ++ GT+ Y+ PE
Sbjct: 131 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRRD-DLCGTLDYLPPE 179
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 43/252 (17%)
Query: 467 YFDPNSMEINFR-EFTFQELQEATKGFSKLVGTGSSGKVYR----GILRLKDTQIEIAVK 521
           Y DP  +  + + EF    L      F K +G G+ GKV      G+++  D  + +AVK
Sbjct: 29  YIDPTQLPYDHKWEFPRNRLS-----FGKTLGAGAFGKVVEATAYGLIK-SDAAMTVAVK 82
Query: 522 KLEKDIEKTNEE-FMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF 579
            L+     T  E  M+ELK++    +H N+V LLG C+     L++ E    G L NFL 
Sbjct: 83  MLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL- 141
Query: 580 HEGQRPGWV-------------------QRVEIALGVARGLLYLHEECETQIIHCDIKPQ 620
              +R  ++                     +  +  VA+G+ +L  +     IH D+  +
Sbjct: 142 -RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAAR 197
Query: 621 NVLLDLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVD 679
           N+L     L    + KI DFG+++ +  D       N R  + ++APE + N   T + D
Sbjct: 198 NIL-----LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD 252
Query: 680 VFSFGVMLLEII 691
           V+S+G+ L E+ 
Sbjct: 253 VWSYGIFLWELF 264

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 18/207 (8%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           F +++G GS GKV   + R+K+T    AVK L+KD+   +++    MTE +I+    +  
Sbjct: 27  FIRVLGKGSFGKVM--LARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            +  L  C +   RL       NG    F   + +R    +    A  +   L++LH++ 
Sbjct: 85  FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK- 143
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK--LLNKDQTRTDTNMRGTMGYVAP 666
              II+ D+K  NVLLD +        K++DFG+ K  + N   T T     GT  Y+AP
Sbjct: 144 --GIIYRDLKLDNVLLDHEG-----HCKLADFGMCKEGICNGVTTAT---FCGTPDYIAP 193
Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICG 693
           E L+ +     VD ++ GV+L E++CG
Sbjct: 194 EILQEMLYGPAVDWWAMGVLLYEMLCG 220

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 112/233 (48%), Gaps = 46/233 (19%)
Query: 492 FSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHK 547
             K +G G  GKV +     L+ +     +AVK L+++   +   + ++E  ++ + +H 
Sbjct: 27  LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR--PGWVQR--------------- 590
           ++++L G CS++   LL+ E    G+L  FL  E ++  PG++                 
Sbjct: 87  HVIKLYGACSQDGPLLLIVEYAKYGSLRGFL-RESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 591 -------VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS 643
                  +  A  +++G+ YL    E +++H D+  +N+L     +      KISDFG+S
Sbjct: 146 ALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNIL-----VAEGRKMKISDFGLS 197
Query: 644 KLLNKDQTRTDTNMRGTMGYVAPEW-----LRNVPVTTKVDVFSFGVMLLEII 691
               +D    D+ ++ + G +  +W     L +   TT+ DV+SFGV+L EI+
Sbjct: 198 ----RDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 10/198 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +GTG+ G V+R   R   T    A K +    E   E    E++ +    H  LV L   
Sbjct: 59  LGTGAFGVVHRVTERA--TGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
             ++++ +++YE M  G L   +  E  +    + VE    V +GL ++H   E   +H 
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHL 173
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           D+KP+N++   K  +     K+ DFG++  L+  Q+   T   GT  + APE     PV 
Sbjct: 174 DLKPENIMFTTKRSNE---LKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEGKPVG 228
Query: 676 TKVDVFSFGVMLLEIICG 693
              D++S GV+   ++ G
Sbjct: 229 YYTDMWSVGVLSYILLSG 246

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 16  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 74  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 127
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R  T++ GT+ Y+ PE
Sbjct: 128 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRR-TDLCGTLDYLPPE 176
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 111/230 (48%), Gaps = 32/230 (13%)
Query: 473 MEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT- 530
           ME   R++  ++ +       + +G G  G VY  + R K ++  +A+K L K  +EK  
Sbjct: 1   MESKKRQWALEDFE-----IGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAG 53
Query: 531 -NEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQR 584
              +   E++I     H N++RL G+  +  +  L+ E  P GT+   L     F E + 
Sbjct: 54  VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 585 PGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK 644
             ++  +      A  L Y H +   ++IH DIKP+N+LL      +    KI+DFG S 
Sbjct: 114 ATYITEL------ANALSYCHSK---RVIHRDIKPENLLLG-----SAGELKIADFGWS- 158
Query: 645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
            ++   +R  T + GT+ Y+ PE +       KVD++S GV+  E + G+
Sbjct: 159 -VHAPSSRR-TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 21  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 79  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 132
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R  T++ GT+ Y+ PE
Sbjct: 133 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRR-TDLCGTLDYLPPE 181
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 17  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 75  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 128
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R  T++ GT+ Y+ PE
Sbjct: 129 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRR-TDLCGTLDYLPPE 177
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 32/231 (13%)
Query: 472 SMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT 530
           +ME   R++  ++ +       + +G G  G VY  + R K ++  +A+K L K  +EK 
Sbjct: 2   AMESKKRQWALEDFE-----IGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKA 54
Query: 531 --NEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQ 583
               +   E++I     H N++RL G+  +  +  L+ E  P G +   L     F E +
Sbjct: 55  GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQR 114
Query: 584 RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS 643
              ++  +      A  L Y H +   ++IH DIKP+N+LL      +    KI+DFG S
Sbjct: 115 TATYITEL------ANALSYCHSK---RVIHRDIKPENLLLG-----SAGELKIADFGWS 160
Query: 644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
             ++   +R  T + GT+ Y+ PE +       KVD++S GV+  E + G+
Sbjct: 161 --VHAPSSRR-TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 112/233 (48%), Gaps = 46/233 (19%)
Query: 492 FSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHK 547
             K +G G  GKV +     L+ +     +AVK L+++   +   + ++E  ++ + +H 
Sbjct: 27  LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR--PGWVQR--------------- 590
           ++++L G CS++   LL+ E    G+L  FL  E ++  PG++                 
Sbjct: 87  HVIKLYGACSQDGPLLLIVEYAKYGSLRGFL-RESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 591 -------VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS 643
                  +  A  +++G+ YL    E +++H D+  +N+L     +      KISDFG+S
Sbjct: 146 ALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNIL-----VAEGRKMKISDFGLS 197
Query: 644 KLLNKDQTRTDTNMRGTMGYVAPEW-----LRNVPVTTKVDVFSFGVMLLEII 691
               +D    D+ ++ + G +  +W     L +   TT+ DV+SFGV+L EI+
Sbjct: 198 ----RDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 16  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 74  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 127
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R  T++ GT+ Y+ PE
Sbjct: 128 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRR-TDLCGTLDYLPPE 176
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 21  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 79  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 132
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R  T + GT+ Y+ PE
Sbjct: 133 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRR-TTLCGTLDYLPPE 181
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 182 XIEGRXHDEKVDLWSLGVLCYEFLVGK 208

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 111/233 (47%), Gaps = 46/233 (19%)
Query: 492 FSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHK 547
             K +G G  GKV +     L+ +     +AVK L+++   +   + ++E  ++ + +H 
Sbjct: 27  LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR--PGWVQR--------------- 590
           ++++L G CS++   LL+ E    G+L  FL  E ++  PG++                 
Sbjct: 87  HVIKLYGACSQDGPLLLIVEYAKYGSLRGFL-RESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 591 -------VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS 643
                  +  A  +++G+ YL    E  ++H D+  +N+L     +      KISDFG+S
Sbjct: 146 ALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNIL-----VAEGRKMKISDFGLS 197
Query: 644 KLLNKDQTRTDTNMRGTMGYVAPEW-----LRNVPVTTKVDVFSFGVMLLEII 691
               +D    D+ ++ + G +  +W     L +   TT+ DV+SFGV+L EI+
Sbjct: 198 ----RDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 111/230 (48%), Gaps = 32/230 (13%)
Query: 473 MEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT- 530
           ME   R++  ++ +       + +G G  G VY  + R K ++  +A+K L K  +EK  
Sbjct: 1   MESKKRQWALEDFE-----IGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAG 53
Query: 531 -NEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQR 584
              +   E++I     H N++RL G+  +  +  L+ E  P GT+   L     F E + 
Sbjct: 54  VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 585 PGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK 644
             ++  +      A  L Y H +   ++IH DIKP+N+LL      +    KI+DFG S 
Sbjct: 114 ATYITEL------ANALSYCHSK---RVIHRDIKPENLLLG-----SAGELKIADFGWS- 158
Query: 645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
            ++   +R  T + GT+ Y+ PE +       KVD++S GV+  E + G+
Sbjct: 159 -VHAPSSRR-TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 16  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 74  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 127
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R  T + GT+ Y+ PE
Sbjct: 128 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRR-TELCGTLDYLPPE 176
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 16  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 74  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 127
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R  T + GT+ Y+ PE
Sbjct: 128 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRR-TTLCGTLDYLPPE 176
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 17  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 75  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 128
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S   +   +R  T + GT+ Y+ PE
Sbjct: 129 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--CHAPSSRR-TTLSGTLDYLPPE 177
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 110/211 (52%), Gaps = 13/211 (6%)
Query: 485 LQEATKGFSKLVGTGSSGKVYRG--ILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKII 541
           L+E      K++G+G+ G VY+G  I   +  +I +A+ +L E    K N+E + E  ++
Sbjct: 46  LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVM 105
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
               + ++ RLLG C     +L+  +LMP G L +++       G    +   + +A+G+
Sbjct: 106 ASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 164
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGT 660
            YL +    +++H D+  +NVL     + T    KI+DFG++KLL  ++        +  
Sbjct: 165 NYLEDR---RLVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 216
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + ++A E + +   T + DV+S+GV + E++
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWELM 247

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 20  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 78  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 131
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R  T + GT+ Y+ PE
Sbjct: 132 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRR-TTLCGTLDYLPPE 180
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVGK 207

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 20/206 (9%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE---FMTELKIIGRTHHKNLV 550
           K +G+G+ G+V   + + K T  E A+K ++K    T       + E+ ++ +  H N++
Sbjct: 10  KKLGSGAYGEVL--LCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIM 67
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           +L  F  ++    LV E+   G L + +    Q+   V    I   V  G  YLH+    
Sbjct: 68  KLYEFFEDKRNYYLVMEVYRGGELFDEIILR-QKFSEVDAAVIMKQVLSGTTYLHKH--- 123
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS---KLLNKDQTRTDTNMRGTMGYVAPE 667
            I+H D+KP+N+LL+ K+ D   + KI DFG+S   ++  K + R      GT  Y+APE
Sbjct: 124 NIVHRDLKPENLLLESKSRDA--LIKIVDFGLSAHFEVGGKMKERL-----GTAYYIAPE 176
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            LR      K DV+S GV+L  ++CG
Sbjct: 177 VLRK-KYDEKCDVWSCGVILYILLCG 201

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 42  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 153
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R  T + GT+ Y+ PE
Sbjct: 154 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRR-TTLCGTLDYLPPE 202
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVGK 229

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 15  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 72
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 73  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 126
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R  T + GT+ Y+ PE
Sbjct: 127 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRR-TTLCGTLDYLPPE 175
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 176 MIEGRMHDEKVDLWSLGVLCYEFLVGK 202

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 103/200 (51%), Gaps = 16/200 (8%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ GKVY+   + K+T    A K +E   E+  E+++ E++I+    H  +V+LLG 
Sbjct: 19  LGDGAFGKVYKA--KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 76
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
              + K  ++ E  P G +   +    +     Q   +   +   L +LH +   +IIH 
Sbjct: 77  YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHR 133
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP-----EWLR 670
           D+K  NVL+   TL+ +   +++DFG+S    K   + D+ + GT  ++AP     E ++
Sbjct: 134 DLKAGNVLM---TLEGDI--RLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMK 187
Query: 671 NVPVTTKVDVFSFGVMLLEI 690
           + P   K D++S G+ L+E+
Sbjct: 188 DTPYDYKADIWSLGITLIEM 207

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 110/231 (47%), Gaps = 32/231 (13%)
Query: 472 SMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT 530
           +ME   R++  ++ +       + +G G  G VY  + R K ++  +A+K L K  +EK 
Sbjct: 2   AMESKKRQWALEDFE-----IGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKA 54
Query: 531 --NEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQ 583
               +   E++I     H N++RL G+  +  +  L+ E  P G +   L     F E +
Sbjct: 55  GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQR 114
Query: 584 RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS 643
              ++  +      A  L Y H +   ++IH DIKP+N+LL      +    KI+DFG S
Sbjct: 115 TATYITEL------ANALSYCHSK---RVIHRDIKPENLLLG-----SAGELKIADFGWS 160
Query: 644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
             ++   +R    + GT+ Y+ PE +       KVD++S GV+  E + G+
Sbjct: 161 --VHAPSSRR-XXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 33  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 91  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 144
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R  T + GT+ Y+ PE
Sbjct: 145 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRR-TTLCGTLDYLPPE 193
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 194 MIEGRMHDEKVDLWSLGVLCYEFLVGK 220

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 16  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 74  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 127
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R  T + GT+ Y+ PE
Sbjct: 128 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRR-TXLCGTLDYLPPE 176
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 103/200 (51%), Gaps = 16/200 (8%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ GKVY+   + K+T    A K +E   E+  E+++ E++I+    H  +V+LLG 
Sbjct: 27  LGDGAFGKVYKA--KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 84
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
              + K  ++ E  P G +   +    +     Q   +   +   L +LH +   +IIH 
Sbjct: 85  YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHR 141
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP-----EWLR 670
           D+K  NVL+   TL+ +   +++DFG+S    K   + D+ + GT  ++AP     E ++
Sbjct: 142 DLKAGNVLM---TLEGDI--RLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMK 195
Query: 671 NVPVTTKVDVFSFGVMLLEI 690
           + P   K D++S G+ L+E+
Sbjct: 196 DTPYDYKADIWSLGITLIEM 215

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 22/213 (10%)
Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVK--KLEKDIEKTNEEFMTELKIIGRTHHKN 548
             K++G G  G V  G L+ +D T +++AVK  KL+   ++  EEF++E   +    H N
Sbjct: 38  LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 549 LVRLLGFCSEED-----KRLLVYELMPNGTLSNFLFHEGQRPG-----WVQRVEIALGVA 598
           ++RLLG C E       K +++   M  G L  +L +     G         ++  + +A
Sbjct: 98  VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS-KLLNKDQTRTDTNM 657
            G+ YL        +H D+  +N +     L  +    ++DFG+S K+ + D  R     
Sbjct: 158 LGMEYLSNR---NFLHRDLAARNCM-----LRDDMTVCVADFGLSKKIYSGDYYRQGRIA 209
Query: 658 RGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
           +  + ++A E L +   T+K DV++FGV + EI
Sbjct: 210 KMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 110/217 (50%), Gaps = 20/217 (9%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLE--KDIEKTNEEFMTELKII 541
           E+ +      + +G+GS G VY+G         ++AVK L       +  + F  E+ ++
Sbjct: 8   EIPDGQITVGQRIGSGSFGTVYKG-----KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 62
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +T H N++  +G+ S + +  +V +     +L + L     +    + ++IA   ARG+
Sbjct: 63  RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGM 121
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNMRGT 660
            YLH +    IIH D+K  N+ L       +   KI DFG++ + ++   +     + G+
Sbjct: 122 DYLHAKS---IIHRDLKSNNIFLH-----EDNTVKIGDFGLATVKSRWSGSHQFEQLSGS 173
Query: 661 MGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGR 694
           + ++APE +R   + P + + DV++FG++L E++ G+
Sbjct: 174 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K  +  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 13  LGKGKFGNVY--LAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 70
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 71  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 124
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R  T + GT+ Y+ PE
Sbjct: 125 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRR-TTLCGTLDYLPPE 173
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 174 MIEGRMHDEKVDLWSLGVLCYEFLVGK 200

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+SG VY  +     T  E+A++++    +   E  + E+ ++    + N+V  L  
Sbjct: 28  IGQGASGTVYTAMDVA--TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               D+  +V E +  G+L++ +       G  Q   +     + L +LH     Q+IH 
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVVTETCMDEG--QIAAVCRECLQALEFLHS---NQVIHR 140
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  N+LL +     +   K++DFG    +  +Q++  T M GT  ++APE +      
Sbjct: 141 DIKSDNILLGM-----DGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYG 194
Query: 676 TKVDVFSFGVMLLEIICGR 694
            KVD++S G+M +E+I G 
Sbjct: 195 PKVDIWSLGIMAIEMIEGE 213

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K+++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 16  LGKGKFGNVY--LAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 74  YGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 127
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R    + GT+ Y+ PE
Sbjct: 128 ---KVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRR-AALCGTLDYLPPE 176
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 32/230 (13%)
Query: 473 MEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT- 530
           ME   R++  ++ +       + +G G  G VY  + R K ++  +A+K L K  +EK  
Sbjct: 1   MESKKRQWALEDFE-----IGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAG 53
Query: 531 -NEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQR 584
              +   E++I     H N++RL G+  +  +  L+ E  P GT+   L     F E + 
Sbjct: 54  VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 585 PGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK 644
             ++  +      A  L Y H +   ++IH DIKP+N+LL      +    KI++FG S 
Sbjct: 114 ATYITEL------ANALSYCHSK---RVIHRDIKPENLLLG-----SAGELKIANFGWS- 158
Query: 645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
            ++   +R  T + GT+ Y+ PE +       KVD++S GV+  E + G+
Sbjct: 159 -VHAPSSRR-TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 38/229 (16%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQIEIAVKKLEKDIEK-TNEEFMTELKIIGRTHH 546
           + + +G G+ G+V++    G+L  +   + +AVK L+++       +F  E  ++    +
Sbjct: 51  YVRDIGEGAFGRVFQARAPGLLPYEPFTM-VAVKMLKEEASADMQADFQREAALMAEFDN 109
Query: 547 KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR------------------PG-- 586
            N+V+LLG C+      L++E M  G L+ FL                        PG  
Sbjct: 110 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 587 ---WVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS 643
                +++ IA  VA G+ YL E    + +H D+  +N L+       N + KI+DFG+S
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVG-----ENMVVKIADFGLS 221
Query: 644 K-LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + + + D  + D N    + ++ PE +     TT+ DV+++GV+L EI 
Sbjct: 222 RNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 110/217 (50%), Gaps = 20/217 (9%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLE--KDIEKTNEEFMTELKII 541
           E+ +      + +G+GS G VY+G         ++AVK L       +  + F  E+ ++
Sbjct: 9   EIPDGQITVGQRIGSGSFGTVYKG-----KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +T H N++  +G+ S + +  +V +     +L + L     +   ++ ++IA   A+G+
Sbjct: 64  RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 122
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNMRGT 660
            YLH +    IIH D+K  N+ L       +   KI DFG++ + ++   +     + G+
Sbjct: 123 DYLHAKS---IIHRDLKSNNIFLH-----EDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 174
Query: 661 MGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGR 694
           + ++APE +R     P + + DV++FG++L E++ G+
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 110/218 (50%), Gaps = 21/218 (9%)
Query: 482 FQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEI-AVKKLEKDIEKTN--EEFMTEL 538
           FQ L E  +   K VG G+ G VY+     KD+Q  I A+K++  D E        + E+
Sbjct: 16  FQGLMEKYQKLEK-VGEGTYGVVYKA----KDSQGRIVALKRIRLDAEDEGIPSTAIREI 70
Query: 539 KIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GV 597
            ++   HH N+V L+     E    LV+E M        +  E +      +++I L  +
Sbjct: 71  SLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKK--VLDENKTGLQDSQIKIYLYQL 128
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
            RG+ + H+    +I+H D+KPQN+L     ++++   K++DFG+++       R+ T+ 
Sbjct: 129 LRGVAHCHQH---RILHRDLKPQNLL-----INSDGALKLADFGLARAFGI-PVRSYTHE 179
Query: 658 RGTMGYVAPEWLR-NVPVTTKVDVFSFGVMLLEIICGR 694
             T+ Y AP+ L  +   +T VD++S G +  E+I G+
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 37/226 (16%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQIEIAVKKLEKDIEKTNEE-FMTELKIIGRT-H 545
           F K +G G+ GKV      G+++  D  + +AVK L+     T  E  M+ELK++    +
Sbjct: 43  FGKTLGAGAFGKVVEATAYGLIK-SDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWV----------------- 588
           H N+V LLG C+     L++ E    G L NFL    +R  ++                 
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDDELALD 159
Query: 589 --QRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL 646
               +  +  VA+G+ +L  +     IH D+  +N+L     L    + KI DFG+++ +
Sbjct: 160 LEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL-----LTHGRITKICDFGLARDI 211
Query: 647 NKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
             D       N R  + ++APE + N   T + DV+S+G+ L E+ 
Sbjct: 212 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 257

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 19  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 77  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 130
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R    + GT+ Y+ PE
Sbjct: 131 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRR-AALCGTLDYLPPE 179
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 110/218 (50%), Gaps = 21/218 (9%)
Query: 482 FQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEI-AVKKLEKDIEKTN--EEFMTEL 538
           FQ L E  +   K VG G+ G VY+     KD+Q  I A+K++  D E        + E+
Sbjct: 16  FQGLMEKYQKLEK-VGEGTYGVVYKA----KDSQGRIVALKRIRLDAEDEGIPSTAIREI 70
Query: 539 KIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GV 597
            ++   HH N+V L+     E    LV+E M        +  E +      +++I L  +
Sbjct: 71  SLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKK--VLDENKTGLQDSQIKIYLYQL 128
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
            RG+ + H+    +I+H D+KPQN+L     ++++   K++DFG+++       R+ T+ 
Sbjct: 129 LRGVAHCHQH---RILHRDLKPQNLL-----INSDGALKLADFGLARAFGI-PVRSYTHE 179
Query: 658 RGTMGYVAPEWLR-NVPVTTKVDVFSFGVMLLEIICGR 694
             T+ Y AP+ L  +   +T VD++S G +  E+I G+
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 110/217 (50%), Gaps = 20/217 (9%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLE--KDIEKTNEEFMTELKII 541
           E+ +      + +G+GS G VY+G         ++AVK L       +  + F  E+ ++
Sbjct: 6   EIPDGQITVGQRIGSGSFGTVYKG-----KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +T H N++  +G+ S + +  +V +     +L + L     +   ++ ++IA   A+G+
Sbjct: 61  RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 119
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNMRGT 660
            YLH +    IIH D+K  N+ L       +   KI DFG++ + ++   +     + G+
Sbjct: 120 DYLHAKS---IIHRDLKSNNIFLH-----EDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 171
Query: 661 MGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGR 694
           + ++APE +R     P + + DV++FG++L E++ G+
Sbjct: 172 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 17/207 (8%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 41  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 549 LVRLLGFCSEEDKRLLV-YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            V+L  FC ++D++L        NG L  ++   G       R   A  +   L YLH +
Sbjct: 99  FVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK 156
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAP 666
               IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+P
Sbjct: 157 G---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICG 693
           E L         D+++ G ++ +++ G
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAG 235

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 110/217 (50%), Gaps = 20/217 (9%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLE--KDIEKTNEEFMTELKII 541
           E+ +      + +G+GS G VY+G         ++AVK L       +  + F  E+ ++
Sbjct: 4   EIPDGQITVGQRIGSGSFGTVYKG-----KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 58
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +T H N++  +G+ S + +  +V +     +L + L     +   ++ ++IA   A+G+
Sbjct: 59  RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 117
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNMRGT 660
            YLH +    IIH D+K  N+ L       +   KI DFG++ + ++   +     + G+
Sbjct: 118 DYLHAKS---IIHRDLKSNNIFLH-----EDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 169
Query: 661 MGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGR 694
           + ++APE +R     P + + DV++FG++L E++ G+
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 110/217 (50%), Gaps = 20/217 (9%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLE--KDIEKTNEEFMTELKII 541
           E+ +      + +G+GS G VY+G         ++AVK L       +  + F  E+ ++
Sbjct: 9   EIPDGQITVGQRIGSGSFGTVYKG-----KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +T H N++  +G+ S + +  +V +     +L + L     +   ++ ++IA   A+G+
Sbjct: 64  RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 122
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNMRGT 660
            YLH +    IIH D+K  N+ L       +   KI DFG++ + ++   +     + G+
Sbjct: 123 DYLHAKS---IIHRDLKSNNIFLH-----EDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 174
Query: 661 MGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGR 694
           + ++APE +R     P + + DV++FG++L E++ G+
Sbjct: 175 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 103/210 (49%), Gaps = 22/210 (10%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLV 550
           F + +G+G+ G V+  ++  + + +E  +K + KD  +   E+   E++++    H N++
Sbjct: 26  FKRKLGSGAFGDVH--LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR-----PGWVQRVEIALGVARGLLYLH 605
           ++     +     +V E    G L   +     R      G+V   E+   +   L Y H
Sbjct: 84  KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYV--AELMKQMMNALAYFH 141
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMA--KISDFGISKLLNKDQTRTDTNMRGTMGY 663
            +    ++H D+KP+N+L      DT+  +  KI DFG+++L   D+    TN  GT  Y
Sbjct: 142 SQ---HVVHKDLKPENILFQ----DTSPHSPIKIIDFGLAELFKSDE--HSTNAAGTALY 192
Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           +APE  +   VT K D++S GV++  ++ G
Sbjct: 193 MAPEVFKR-DVTFKCDIWSAGVVMYFLLTG 221

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 18  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 76  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 129
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI++FG S  ++   +R  T + GT+ Y+ PE
Sbjct: 130 ---RVIHRDIKPENLLLG-----SAGELKIANFGWS--VHAPSSRR-TTLCGTLDYLPPE 178
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVGK 205

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 535 MTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEI 593
           M E KI+ + H + +V L      +    LV  +M  G +   +++ +   PG+ +   I
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 594 --ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT 651
                +  GL +LH+     II+ D+KP+NVLLD    D N   +ISD G++  L   QT
Sbjct: 293 FYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDD---DGN--VRISDLGLAVELKAGQT 344
Query: 652 RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           +T     GT G++APE L        VD F+ GV L E+I  R
Sbjct: 345 KT-KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 535 MTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEI 593
           M E KI+ + H + +V L      +    LV  +M  G +   +++ +   PG+ +   I
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 594 --ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT 651
                +  GL +LH+     II+ D+KP+NVLLD    D N   +ISD G++  L   QT
Sbjct: 293 FYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDD---DGN--VRISDLGLAVELKAGQT 344
Query: 652 RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           +T     GT G++APE L        VD F+ GV L E+I  R
Sbjct: 345 KT-KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 26/185 (14%)
Query: 518 IAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLG--FCSEEDKRLLVYELMPNGTLS 575
           +AVK+L+        +F  E++I+   H   +V+  G  +     +  LV E +P+G L 
Sbjct: 39  VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLR 98
Query: 576 NFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE-------TQIIHCDIKPQNVLLDLKT 628
           +FL          QR    L  +R LLY  + C+        + +H D+  +N+L++   
Sbjct: 99  DFL----------QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE--- 145
Query: 629 LDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVM 686
             +    KI+DFG++KLL  +KD        +  + + APE L +   + + DV+SFGV+
Sbjct: 146 --SEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 203
Query: 687 LLEII 691
           L E+ 
Sbjct: 204 LYELF 208

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 535 MTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEI 593
           M E KI+ + H + +V L      +    LV  +M  G +   +++ +   PG+ +   I
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 594 --ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT 651
                +  GL +LH+     II+ D+KP+NVLLD    D N   +ISD G++  L   QT
Sbjct: 293 FYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDD---DGN--VRISDLGLAVELKAGQT 344
Query: 652 RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           +T     GT G++APE L        VD F+ GV L E+I  R
Sbjct: 345 KT-KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 32/230 (13%)
Query: 473 MEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT- 530
           ME   R++  ++ +       + +G G  G VY  + R K ++  +A+K L K  +EK  
Sbjct: 1   MESKKRQWALEDFE-----IGRPLGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAG 53
Query: 531 -NEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQR 584
              +   E++I     H N++RL G+  +  +  L+ E  P GT+   L     F E + 
Sbjct: 54  VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 113
Query: 585 PGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK 644
             ++  +      A  L Y H +   ++IH DIKP+N+LL      +    KI+DFG S 
Sbjct: 114 ATYITEL------ANALSYCHSK---RVIHRDIKPENLLLG-----SAGELKIADFGWS- 158
Query: 645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
            ++   +R    + GT+ Y+ PE +       KVD++S GV+  E + G+
Sbjct: 159 -VHAPSSRR-XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 16  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 74  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 127
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R    + GT+ Y+ PE
Sbjct: 128 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRR-AALCGTLDYLPPE 176
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 26/185 (14%)
Query: 518 IAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLS 575
           +AVK+L+        +F  E++I+   H   +V+  G      ++   LV E +P+G L 
Sbjct: 55  VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 114
Query: 576 NFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE-------TQIIHCDIKPQNVLLDLKT 628
           +FL          QR    L  +R LLY  + C+        + +H D+  +N+L++   
Sbjct: 115 DFL----------QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE--- 161
Query: 629 LDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVM 686
             +    KI+DFG++KLL  +KD        +  + + APE L +   + + DV+SFGV+
Sbjct: 162 --SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 219
Query: 687 LLEII 691
           L E+ 
Sbjct: 220 LYELF 224

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 18  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 76  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 129
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R    + GT+ Y+ PE
Sbjct: 130 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRR-XXLCGTLDYLPPE 178
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVGK 205

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 26/185 (14%)
Query: 518 IAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLS 575
           +AVK+L+        +F  E++I+   H   +V+  G      ++   LV E +P+G L 
Sbjct: 43  VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 102
Query: 576 NFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE-------TQIIHCDIKPQNVLLDLKT 628
           +FL          QR    L  +R LLY  + C+        + +H D+  +N+L++   
Sbjct: 103 DFL----------QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE--- 149
Query: 629 LDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVM 686
             +    KI+DFG++KLL  +KD        +  + + APE L +   + + DV+SFGV+
Sbjct: 150 --SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 207
Query: 687 LLEII 691
           L E+ 
Sbjct: 208 LYELF 212

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 535 MTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEI 593
           M E KI+ + H + +V L      +    LV  +M  G +   +++ +   PG+ +   I
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 594 --ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT 651
                +  GL +LH+     II+ D+KP+NVLLD    D N   +ISD G++  L   QT
Sbjct: 293 FYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDD---DGN--VRISDLGLAVELKAGQT 344
Query: 652 RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           +T     GT G++APE L        VD F+ GV L E+I  R
Sbjct: 345 KT-KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 22/223 (9%)
Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK---DIEKT 530
           E+  R+FT  +         + +G G  G VY  + R K  +  +A+K L K   + E  
Sbjct: 6   EMPKRKFTIDDFD-----IGRPLGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGV 58
Query: 531 NEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
             +   E++I     H N++R+  +  +  +  L+ E  P G L    + E Q+ G    
Sbjct: 59  EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFDE 114
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
              A  +      LH   E ++IH DIKP+N+L+  K        KI+DFG S      +
Sbjct: 115 QRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG-----ELKIADFGWSVHAPSLR 169
Query: 651 TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
            R    M GT+ Y+ PE +       KVD++  GV+  E + G
Sbjct: 170 RRX---MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 15/179 (8%)
Query: 518 IAVKKLEKDIEKTNEE-FMTELKIIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTL 574
           +AVK L+ D    +   +  E+ I+   +H+++++  G C ++ ++   LV E +P G+L
Sbjct: 46  VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 575 SNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM 634
            ++L       G  Q +  A  +  G+ YLH +     IH ++  +NVLLD      + +
Sbjct: 106 RDYL--PRHSIGLAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLD-----NDRL 155
Query: 635 AKISDFGISKLLNK--DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            KI DFG++K + +  +  R   +    + + APE L+        DV+SFGV L E++
Sbjct: 156 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 26/185 (14%)
Query: 518 IAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLS 575
           +AVK+L+        +F  E++I+   H   +V+  G      ++   LV E +P+G L 
Sbjct: 42  VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLR 101
Query: 576 NFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE-------TQIIHCDIKPQNVLLDLKT 628
           +FL          QR    L  +R LLY  + C+        + +H D+  +N+L++   
Sbjct: 102 DFL----------QRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE--- 148
Query: 629 LDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVM 686
             +    KI+DFG++KLL  +KD        +  + + APE L +   + + DV+SFGV+
Sbjct: 149 --SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVV 206
Query: 687 LLEII 691
           L E+ 
Sbjct: 207 LYELF 211

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 90/179 (50%), Gaps = 15/179 (8%)
Query: 518 IAVKKLEKDIEKTNEE-FMTELKIIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTL 574
           +AVK L+ D    +   +  E+ I+   +H+++++  G C ++ ++   LV E +P G+L
Sbjct: 46  VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 575 SNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM 634
            ++L       G  Q +  A  +  G+ YLH +     IH ++  +NVLLD      + +
Sbjct: 106 RDYL--PRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLD-----NDRL 155
Query: 635 AKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            KI DFG++K +    +  R   +    + + APE L+        DV+SFGV L E++
Sbjct: 156 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLE--KDIEKTNEEFMTELKII 541
           E+ +      + +G+GS G VY+G         ++AVK L       +  + F  E+ ++
Sbjct: 4   EIPDGQITVGQRIGSGSFGTVYKG-----KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 58
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +T H N++  +G+ S   +  +V +     +L + L     +   ++ ++IA   A+G+
Sbjct: 59  RKTRHVNILLFMGY-STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 117
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNMRGT 660
            YLH +    IIH D+K  N+ L       +   KI DFG++ + ++   +     + G+
Sbjct: 118 DYLHAKS---IIHRDLKSNNIFLH-----EDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 169
Query: 661 MGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGR 694
           + ++APE +R     P + + DV++FG++L E++ G+
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 110/217 (50%), Gaps = 20/217 (9%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLE--KDIEKTNEEFMTELKII 541
           E+ +      + +G+GS G VY+G         ++AVK L       +  + F  E+ ++
Sbjct: 31  EIPDGQITVGQRIGSGSFGTVYKG-----KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 85
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +T H N++  +G+ S + +  +V +     +L + L     +   ++ ++IA   A+G+
Sbjct: 86  RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 144
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNMRGT 660
            YLH +    IIH D+K  N+ L       +   KI DFG++ + ++   +     + G+
Sbjct: 145 DYLHAKS---IIHRDLKSNNIFLH-----EDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 196
Query: 661 MGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGR 694
           + ++APE +R     P + + DV++FG++L E++ G+
Sbjct: 197 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+SG VY  +     T  E+A++++    +   E  + E+ ++    + N+V  L  
Sbjct: 28  IGQGASGTVYTAMDVA--TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               D+  +V E +  G+L++ +       G  Q   +     + L +LH     Q+IH 
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVVTETCMDEG--QIAAVCRECLQALEFLHS---NQVIHR 140
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  N+LL +     +   K++DFG    +  +Q++  + M GT  ++APE +      
Sbjct: 141 DIKSDNILLGM-----DGSVKLTDFGFCAQITPEQSKR-SEMVGTPYWMAPEVVTRKAYG 194
Query: 676 TKVDVFSFGVMLLEIICGR 694
            KVD++S G+M +E+I G 
Sbjct: 195 PKVDIWSLGIMAIEMIEGE 213

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 110/217 (50%), Gaps = 20/217 (9%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLE--KDIEKTNEEFMTELKII 541
           E+ +      + +G+GS G VY+G         ++AVK L       +  + F  E+ ++
Sbjct: 32  EIPDGQITVGQRIGSGSFGTVYKG-----KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +T H N++  +G+ S + +  +V +     +L + L     +   ++ ++IA   A+G+
Sbjct: 87  RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 145
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNMRGT 660
            YLH +    IIH D+K  N+ L       +   KI DFG++ + ++   +     + G+
Sbjct: 146 DYLHAKS---IIHRDLKSNNIFLH-----EDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 197
Query: 661 MGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGR 694
           + ++APE +R     P + + DV++FG++L E++ G+
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKT--NEEFMTELKIIGRTHHKNLVRL 552
           +G G  G VY  + R K ++  +A+K L K  +EK     +   E++I     H N++RL
Sbjct: 16  LGKGKFGNVY--LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            G+  +  +  L+ E  P GT+   L     F E +   ++  +      A  L Y H +
Sbjct: 74  YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL------ANALSYCHSK 127
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH DIKP+N+LL      +    KI+DFG S  ++   +R    + GT+ Y+ PE
Sbjct: 128 ---RVIHRDIKPENLLLG-----SAGELKIADFGWS--VHAPSSRR-XXLCGTLDYLPPE 176
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +       KVD++S GV+  E + G+
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 105/205 (51%), Gaps = 20/205 (9%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLE--KDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +G+GS G VY+G         ++AVK L       +  + F  E+ ++ +T H N++  +
Sbjct: 32  IGSGSFGTVYKG-----KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
           G+ S + +  +V +     +L + L     +    + ++IA   ARG+ YLH +    II
Sbjct: 87  GY-STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNMRGTMGYVAPEWLR-- 670
           H D+K  N+ L       +   KI DFG++   ++   +     + G++ ++APE +R  
Sbjct: 143 HRDLKSNNIFLH-----EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 671 -NVPVTTKVDVFSFGVMLLEIICGR 694
            + P + + DV++FG++L E++ G+
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQ 222

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 25/209 (11%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-NEEFMTELKIIGRTHH-KNLVRLL 553
           +G+G+ G+V++  +R + T   IAVK++ +   K  N+  + +L ++ ++H    +V+  
Sbjct: 33  MGSGTCGQVWK--MRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCF 90
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV--EIALGVARGLLYLHEECETQ 611
           G         +  ELM  GT +  L    Q P   +R+  ++ + + + L YL E+    
Sbjct: 91  GTFITNTDVFIAMELM--GTCAEKLKKRMQGP-IPERILGKMTVAIVKALYYLKEK--HG 145
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           +IH D+KP N+LLD +        K+ DFGIS  L  D+ +  +   G   Y+APE + +
Sbjct: 146 VIHRDVKPSNILLDERG-----QIKLCDFGISGRLVDDKAKDRSA--GCAAYMAPERI-D 197
Query: 672 VPVTTK------VDVFSFGVMLLEIICGR 694
            P  TK       DV+S G+ L+E+  G+
Sbjct: 198 PPDPTKPDYDIRADVWSLGISLVELATGQ 226

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 22/223 (9%)
Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK---DIEKT 530
           E+  R+FT  +         + +G G  G VY  + R K  +  +A+K L K   + E  
Sbjct: 5   EMPKRKFTIDDFD-----IVRPLGKGKFGNVY--LAREKQNKFIMALKVLFKSQLEKEGV 57
Query: 531 NEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
             +   E++I     H N++R+  +  +  +  L+ E  P G L    + E Q+ G    
Sbjct: 58  EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFDE 113
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
              A  +      LH   E ++IH DIKP+N+L+  K        KI+DFG S      +
Sbjct: 114 QRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKG-----ELKIADFGWSVHAPSLR 168
Query: 651 TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
            R    M GT+ Y+ PE +       KVD++  GV+  E + G
Sbjct: 169 RRX---MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 14/212 (6%)
Query: 487 EATKGFSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT 544
           E  + F K+  +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   
Sbjct: 7   EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 545 HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLY 603
           +H N+V+LL     E+K  LV+E + +  L  F+         +  ++  L  + +GL +
Sbjct: 67  NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
            H     +++H D+KPQN+L     ++T    K++DFG+++       RT T+   T+ Y
Sbjct: 126 CHSH---RVLHRDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWY 176
Query: 664 VAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
            APE L      +T VD++S G +  E++  R
Sbjct: 177 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+SG VY  +     T  E+A++++    +   E  + E+ ++    + N+V  L  
Sbjct: 28  IGQGASGTVYTAMDVA--TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               D+  +V E +  G+L++ +       G  Q   +     + L +LH     Q+IH 
Sbjct: 86  YLVGDELWVVMEYLAGGSLTDVVTETCMDEG--QIAAVCRECLQALEFLHS---NQVIHR 140
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  N+LL +     +   K++DFG    +  +Q++  + M GT  ++APE +      
Sbjct: 141 DIKSDNILLGM-----DGSVKLTDFGFCAQITPEQSKR-SXMVGTPYWMAPEVVTRKAYG 194
Query: 676 TKVDVFSFGVMLLEIICGR 694
            KVD++S G+M +E+I G 
Sbjct: 195 PKVDIWSLGIMAIEMIEGE 213

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+SG VY  +     T  E+A++++    +   E  + E+ ++    + N+V  L  
Sbjct: 29  IGQGASGTVYTAMDVA--TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               D+  +V E +  G+L++ +       G  Q   +     + L +LH     Q+IH 
Sbjct: 87  YLVGDELWVVMEYLAGGSLTDVVTETCMDEG--QIAAVCRECLQALEFLHS---NQVIHR 141
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  N+LL +     +   K++DFG    +  +Q++  + M GT  ++APE +      
Sbjct: 142 DIKSDNILLGM-----DGSVKLTDFGFCAQITPEQSKR-SXMVGTPYWMAPEVVTRKAYG 195
Query: 676 TKVDVFSFGVMLLEIICGR 694
            KVD++S G+M +E+I G 
Sbjct: 196 PKVDIWSLGIMAIEMIEGE 214

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 14/212 (6%)
Query: 487 EATKGFSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT 544
           E  + F K+  +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   
Sbjct: 7   EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 545 HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLY 603
           +H N+V+LL     E+K  LV+E + +  L  F+         +  ++  L  + +GL +
Sbjct: 67  NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
            H     +++H D+KPQN+L     ++T    K++DFG+++       RT T+   T+ Y
Sbjct: 126 CHSH---RVLHRDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWY 176
Query: 664 VAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
            APE L      +T VD++S G +  E++  R
Sbjct: 177 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 32/224 (14%)
Query: 478 REFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEK--TNEEF 534
           R FT  + +       + +G G  G VY  + R K +   +A+K L K  IEK     + 
Sbjct: 18  RHFTIDDFE-----IGRPLGKGKFGNVY--LAREKKSHFIVALKVLFKSQIEKEGVEHQL 70
Query: 535 MTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQ 589
             E++I    HH N++RL  +  +  +  L+ E  P G L   L     F E QR   + 
Sbjct: 71  RREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDE-QRTATIM 129
Query: 590 RVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
                  +A  L+Y H +   ++IH DIKP+N+      L      KI+DFG S  ++  
Sbjct: 130 E-----ELADALMYCHGK---KVIHRDIKPENL-----LLGLKGELKIADFGWS--VHAP 174
Query: 650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
             R  T M GT+ Y+ PE +       KVD++  GV+  E++ G
Sbjct: 175 SLRRKT-MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 36/212 (16%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENVVKFYGH 72
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVAR------------GLLY 603
             E + + L  E    G L +             R+E  +G+              G++Y
Sbjct: 73  RREGNIQYLFLEYCSGGELFD-------------RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMG 662
           LH      I H DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ 
Sbjct: 120 LHG---IGITHRDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 663 YVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           YVAPE L+      + VDV+S G++L  ++ G
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 104/205 (50%), Gaps = 20/205 (9%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLE--KDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +G+GS G VY+G         ++AVK L       +  + F  E+ ++ +T H N++  +
Sbjct: 32  IGSGSFGTVYKG-----KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
           G+ S   +  +V +     +L + L     +    + ++IA   ARG+ YLH +    II
Sbjct: 87  GY-STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNMRGTMGYVAPEWLR-- 670
           H D+K  N+ L       +   KI DFG++   ++   +     + G++ ++APE +R  
Sbjct: 143 HRDLKSNNIFLH-----EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 671 -NVPVTTKVDVFSFGVMLLEIICGR 694
            + P + + DV++FG++L E++ G+
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQ 222

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 111/208 (53%), Gaps = 23/208 (11%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK-TNEEFMTELKIIGRTHHKNLVRLLG 554
           +G G+   VY+G+   K T + +A+K+++ D E+ T    + E+ ++    H+N+VRL  
Sbjct: 13  LGNGTYATVYKGLN--KTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 555 FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR-VEIAL------GVARGLLYLHEE 607
               E+K  LV+E M N  L  ++  + +  G   R +E+ L       + +GL + H  
Sbjct: 71  VIHTENKLTLVFEFMDN-DLKKYM--DSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH-- 125
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
            E +I+H D+KPQN+L++ +        K+ DFG+++        T ++   T+ Y AP+
Sbjct: 126 -ENKILHRDLKPQNLLINKRG-----QLKLGDFGLARAFGIP-VNTFSSEVVTLWYRAPD 178
Query: 668 WLR-NVPVTTKVDVFSFGVMLLEIICGR 694
            L  +   +T +D++S G +L E+I G+
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGK 206

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 36/212 (16%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENVVKFYGH 73
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVAR------------GLLY 603
             E + + L  E    G L +             R+E  +G+              G++Y
Sbjct: 74  RREGNIQYLFLEYCSGGELFD-------------RIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMG 662
           LH      I H DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ 
Sbjct: 121 LHG---IGITHRDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMXGTLP 172
Query: 663 YVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           YVAPE L+      + VDV+S G++L  ++ G
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 87/179 (48%), Gaps = 15/179 (8%)
Query: 518 IAVKKLEKDIEKTNEE-FMTELKIIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTL 574
           +AVK L+ D    +   +  E+ I+   +H+++++  G C +       LV E +P G+L
Sbjct: 63  VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL 122
Query: 575 SNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM 634
            ++L       G  Q +  A  +  G+ YLH +     IH D+  +NVLLD      + +
Sbjct: 123 RDYL--PRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLD-----NDRL 172
Query: 635 AKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            KI DFG++K +    +  R   +    + + APE L+        DV+SFGV L E++
Sbjct: 173 VKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 105/227 (46%), Gaps = 18/227 (7%)
Query: 472 SMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKT 530
           S +IN    +    + +   F K++G GS GKV   + R K  ++  AVK L+K  I K 
Sbjct: 22  SQQINLGPSSNPHAKPSDFHFLKVIGKGSFGKVL--LARHKAEEVFYAVKVLQKKAILKK 79
Query: 531 NEE--FMTELKIIGR-THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGW 587
            EE   M+E  ++ +   H  LV L       DK   V + +  G L  F   + +R   
Sbjct: 80  KEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL--FYHLQRERCFL 137
Query: 588 VQRVEI-ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL 646
             R    A  +A  L YLH      I++ D+KP+N+L     LD+     ++DFG+ K  
Sbjct: 138 EPRARFYAAEIASALGYLHS---LNIVYRDLKPENIL-----LDSQGHIVLTDFGLCK-E 188
Query: 647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           N +   T +   GT  Y+APE L   P    VD +  G +L E++ G
Sbjct: 189 NIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLE--KDIEKTNEEFMTELKII 541
           E+ +      + +G+GS G VY+G         ++AVK L       +  + F  E+ ++
Sbjct: 4   EIPDGQITVGQRIGSGSFGTVYKG-----KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 58
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +T H N++  +G+ S + +  +V +     +L + L     +   ++ ++IA   A+G+
Sbjct: 59  RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 117
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNMRGT 660
            YLH +    IIH D+K  N+ L       +   KI DFG++   ++   +     + G+
Sbjct: 118 DYLHAKS---IIHRDLKSNNIFLH-----EDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 169
Query: 661 MGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGR 694
           + ++APE +R     P + + DV++FG++L E++ G+
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+SG VY  +     T  E+A++++    +   E  + E+ ++    + N+V  L  
Sbjct: 29  IGQGASGTVYTAMDVA--TGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               D+  +V E +  G+L++ +       G  Q   +     + L +LH     Q+IH 
Sbjct: 87  YLVGDELWVVMEYLAGGSLTDVVTETCMDEG--QIAAVCRECLQALEFLHS---NQVIHR 141
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           +IK  N+LL +     +   K++DFG    +  +Q++  T M GT  ++APE +      
Sbjct: 142 NIKSDNILLGM-----DGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYG 195
Query: 676 TKVDVFSFGVMLLEIICGR 694
            KVD++S G+M +E+I G 
Sbjct: 196 PKVDIWSLGIMAIEMIEGE 214

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 71  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 126
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT T+   T+ Y APE L     
Sbjct: 127 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 70  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 125
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT T+   T+ Y APE L     
Sbjct: 126 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 111/219 (50%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +D    N E    L+I+ +  
Sbjct: 18  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLD 71
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+ +VY     + +P  T+     H  +    +  + + L    
Sbjct: 72  HCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 131 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 181
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 72  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 127
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT T+   T+ Y APE L     
Sbjct: 128 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 181
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRR 202

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 71  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 126
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT T+   T+ Y APE L     
Sbjct: 127 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 71  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 126
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT T+   T+ Y APE L     
Sbjct: 127 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 70  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 125
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT T+   T+ Y APE L     
Sbjct: 126 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLE--KDIEKTNEEFMTELKII 541
           E+ +      + +G+GS G VY+G         ++AVK L       +  + F  E+ ++
Sbjct: 24  EIPDGQITVGQRIGSGSFGTVYKG-----KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 78
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +T H N++  +G+ S + +  +V +     +L + L     +   ++ ++IA   A+G+
Sbjct: 79  RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 137
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNMRGT 660
            YLH +    IIH D+K  N+ L       +   KI DFG++   ++   +     + G+
Sbjct: 138 DYLHAKS---IIHRDLKSNNIFLH-----EDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 189
Query: 661 MGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGR 694
           + ++APE +R     P + + DV++FG++L E++ G+
Sbjct: 190 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 71  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 126
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT T+   T+ Y APE L     
Sbjct: 127 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGXKY 180
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 70  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 125
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT T+   T+ Y APE L     
Sbjct: 126 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 102/213 (47%), Gaps = 24/213 (11%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E+   +    K +G G  G+V+       +   ++AVK + K    + E F+ E  ++  
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATY---NKHTKVAVKTM-KPGSMSVEAFLAEANVMKT 233
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLL 602
             H  LV+L    ++E    ++ E M  G+L +FL   EG +    + ++ +  +A G+ 
Sbjct: 234 LQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 292
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           ++ +      IH D++  N+L+       + + KI+DFG++++            +  + 
Sbjct: 293 FIEQR---NYIHRDLRAANILVS-----ASLVCKIADFGLARV----------GAKFPIK 334
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           + APE +     T K DV+SFG++L+EI+   R
Sbjct: 335 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 367

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 15  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 75  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 130
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT T+   T+ Y APE L     
Sbjct: 131 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 184
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRR 205

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G++G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 14  LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGH 72
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
             E + + L  E    G L + +  + G      QR    L    G++YLH      I H
Sbjct: 73  RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG---IGITH 127
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMGYVAPEWLRNVP 673
            DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ YVAPE L+   
Sbjct: 128 RDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 674 VTTK-VDVFSFGVMLLEIICG 693
              + VDV+S G++L  ++ G
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAG 203

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 36/212 (16%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGH 72
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVAR------------GLLY 603
             E + + L  E    G L               R+E  +G+              G++Y
Sbjct: 73  RREGNIQYLFLEYCSGGEL-------------FDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMG 662
           LH      I H DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ 
Sbjct: 120 LHG---IGITHRDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 663 YVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           YVAPE L+      + VDV+S G++L  ++ G
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLE--KDIEKTNEEFMTELKII 541
           E+ +      + +G+GS G VY+G         ++AVK L       +  + F  E+ ++
Sbjct: 32  EIPDGQITVGQRIGSGSFGTVYKG-----KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +T H N++  +G+ S + +  +V +     +L + L     +   ++ ++IA   A+G+
Sbjct: 87  RKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGM 145
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNMRGT 660
            YLH +    IIH D+K  N+ L       +   KI DFG++   ++   +     + G+
Sbjct: 146 DYLHAKS---IIHRDLKSNNIFLH-----EDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 197
Query: 661 MGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGR 694
           + ++APE +R     P + + DV++FG++L E++ G+
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 13/198 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS+G V   + R K +  ++AVK ++   ++  E    E+ I+    H N+V +   
Sbjct: 53  IGEGSTGIV--CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
               ++  ++ E +  G L++ +     R    Q   +   V + L YLH +    +IH 
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHAQG---VIHR 165
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  ++LL   TLD     K+SDFG    ++KD  +    + GT  ++APE +      
Sbjct: 166 DIKSDSILL---TLDGR--VKLSDFGFCAQISKDVPKR-KXLVGTPYWMAPEVISRSLYA 219
Query: 676 TKVDVFSFGVMLLEIICG 693
           T+VD++S G+M++E++ G
Sbjct: 220 TEVDIWSLGIMVIEMVDG 237

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGH 73
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
             E + + L  E    G L + +  + G      QR    L    G++YLH      I H
Sbjct: 74  RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHG---IGITH 128
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMGYVAPEWLRNVP 673
            DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ YVAPE L+   
Sbjct: 129 RDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 674 VTTK-VDVFSFGVMLLEIICG 693
              + VDV+S G++L  ++ G
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAG 204

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGH 72
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
             E + + L  E    G L + +  + G      QR    L    G++YLH      I H
Sbjct: 73  RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG---IGITH 127
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMGYVAPEWLRNVP 673
            DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ YVAPE L+   
Sbjct: 128 RDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRRE 182
Query: 674 VTTK-VDVFSFGVMLLEIICG 693
              + VDV+S G++L  ++ G
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAG 203

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 36  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 94  FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 152
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 153 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L     +   D+++ G ++ +++ G
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAG 230

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 71  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH---RVLH 126
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT T+   T+ Y APE L     
Sbjct: 127 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 180
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENVVKFYGH 72
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
             E + + L  E    G L + +  + G      QR    L    G++YLH      I H
Sbjct: 73  RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG---IGITH 127
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMGYVAPEWLRNVP 673
            DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ YVAPE L+   
Sbjct: 128 RDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 674 VTTK-VDVFSFGVMLLEIICG 693
              + VDV+S G++L  ++ G
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAG 203

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINAMLNHENVVKFYGH 73
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
             E + + L  E    G L + +  + G      QR    L    G++YLH      I H
Sbjct: 74  RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHG---IGITH 128
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMGYVAPEWLRNVP 673
            DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ YVAPE L+   
Sbjct: 129 RDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 674 VTTK-VDVFSFGVMLLEIICG 693
              + VDV+S G++L  ++ G
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAG 204

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 25/226 (11%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILR-------LKDTQIEIAVKKLEKDIEKTNEE 533
            F +++     F++ +G G+  K+++G+ R       L +T  E+ +K L+K     +E 
Sbjct: 1   VFHKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHET--EVLLKVLDKAHRNYSES 58
Query: 534 FMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEI 593
           F     ++ +  HK+LV   G C   D+ +LV E +  G+L  +L         + ++E+
Sbjct: 59  FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEV 118
Query: 594 ALGVARGLLYLHEECETQIIHCDIKPQNVLL----DLKTLDTNYMAKISDFGIS-KLLNK 648
           A  +A  + +L    E  +IH ++  +N+LL    D KT +  ++ K+SD GIS  +L K
Sbjct: 119 AKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISITVLPK 174
Query: 649 DQTRTDTNMRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICG 693
           D       ++  + +V PE + N   +    D +SFG  L EI  G
Sbjct: 175 DI------LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 36/212 (16%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGH 72
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVAR------------GLLY 603
             E + + L  E    G L +             R+E  +G+              G++Y
Sbjct: 73  RREGNIQYLFLEYCSGGELFD-------------RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMG 662
           LH      I H DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ 
Sbjct: 120 LHG---IGITHRDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 663 YVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           YVAPE L+      + VDV+S G++L  ++ G
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 36/212 (16%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGH 72
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVAR------------GLLY 603
             E + + L  E    G L +             R+E  +G+              G++Y
Sbjct: 73  RREGNIQYLFLEYCSGGELFD-------------RIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMG 662
           LH      I H DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ 
Sbjct: 120 LHG---IGITHRDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 663 YVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           YVAPE L+      + VDV+S G++L  ++ G
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 203

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 510 RLKDTQIEIAVKKLEKDIEKTN------EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T ++ A K ++K   K++      E+   E+ I+    H N++ L      +   +
Sbjct: 31  REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90
Query: 564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVL 623
           L+ EL+  G L +FL  E +     +  E    +  G+ YLH     QI H D+KP+N++
Sbjct: 91  LILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIM 146
Query: 624 LDLKTLDTNY---MAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDV 680
           L    LD N      KI DFG++  +  D      N+ GT  +VAPE +   P+  + D+
Sbjct: 147 L----LDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPAFVAPEIVNYEPLGLEADM 200
Query: 681 FSFGVMLLEIICG 693
           +S GV+   ++ G
Sbjct: 201 WSIGVITYILLSG 213

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +D    N E    L+I+ +  
Sbjct: 46  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLD 99
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 100 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 158
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 159 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 209
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 210 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +D    N E    L+I+ +  
Sbjct: 23  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLD 76
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 77  HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 135
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 136 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 186
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 187 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 26/227 (11%)
Query: 470 PNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK 529
           P SME       FQ++++        +G G+ G VY+   +L    + +   +L+ + E 
Sbjct: 1   PGSME------NFQKVEK--------IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG 46
Query: 530 TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQ 589
                + E+ ++   +H N+V+LL     E+K  LV+E + +  L  F+         + 
Sbjct: 47  VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLP 105
Query: 590 RVEIAL-GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK 648
            ++  L  + +GL + H     +++H D+KPQN+L     ++T    K++DFG+++    
Sbjct: 106 LIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLL-----INTEGAIKLADFGLARAFGV 157
Query: 649 DQTRTDTNMRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              RT  +   T+ Y APE L      +T VD++S G +  E++  R
Sbjct: 158 -PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 26/227 (11%)
Query: 470 PNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK 529
           P SME       FQ++++        +G G+ G VY+   +L    + +   +L+ + E 
Sbjct: 1   PGSME------NFQKVEK--------IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG 46
Query: 530 TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQ 589
                + E+ ++   +H N+V+LL     E+K  LV+E + +  L  F+         + 
Sbjct: 47  VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLP 105
Query: 590 RVEIAL-GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK 648
            ++  L  + +GL + H     +++H D+KPQN+L     ++T    K++DFG+++    
Sbjct: 106 LIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLL-----INTEGAIKLADFGLARAFGV 157
Query: 649 DQTRTDTNMRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              RT  +   T+ Y APE L      +T VD++S G +  E++  R
Sbjct: 158 -PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +D    N E    L+I+ +  
Sbjct: 54  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLD 107
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 108 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 166
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 167 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 217
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 218 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +D    N E    L+I+ +  
Sbjct: 52  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLD 105
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 106 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 165 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 215
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 216 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 26/227 (11%)
Query: 470 PNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK 529
           P SME       FQ++++        +G G+ G VY+   +L    + +   +L+ + E 
Sbjct: 2   PGSME------NFQKVEK--------IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG 47
Query: 530 TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQ 589
                + E+ ++   +H N+V+LL     E+K  LV+E + +  L  F+         + 
Sbjct: 48  VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLP 106
Query: 590 RVEIAL-GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK 648
            ++  L  + +GL + H     +++H D+KPQN+L     ++T    K++DFG+++    
Sbjct: 107 LIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLL-----INTEGAIKLADFGLARAFGV 158
Query: 649 DQTRTDTNMRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              RT  +   T+ Y APE L      +T VD++S G +  E++  R
Sbjct: 159 -PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGH 73
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
             E + + L  E    G L + +  + G      QR    L    G++YLH      I H
Sbjct: 74  RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHG---IGITH 128
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMGYVAPEWLRNVP 673
            DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ YVAPE L+   
Sbjct: 129 RDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 674 VTTK-VDVFSFGVMLLEIICG 693
              + VDV+S G++L  ++ G
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAG 204

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGH 73
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
             E + + L  E    G L + +  + G      QR    L    G++YLH      I H
Sbjct: 74  RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHG---IGITH 128
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMGYVAPEWLRNVP 673
            DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ YVAPE L+   
Sbjct: 129 RDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 674 VTTK-VDVFSFGVMLLEIICG 693
              + VDV+S G++L  ++ G
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAG 204

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGH 73
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
             E + + L  E    G L + +  + G      QR    L    G++YLH      I H
Sbjct: 74  RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHG---IGITH 128
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMGYVAPEWLRNVP 673
            DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ YVAPE L+   
Sbjct: 129 RDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 674 VTTK-VDVFSFGVMLLEIICG 693
              + VDV+S G++L  ++ G
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAG 204

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 30/221 (13%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +D    N E    L+I+ +  
Sbjct: 52  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLD 105
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 106 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L     R + N
Sbjct: 165 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQL----VRGEPN 213
Query: 657 MRGTMG--YVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
           +       Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 214 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 36  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 94  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 152
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 153 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D+++ G ++ +++ G
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAG 230

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 26/227 (11%)
Query: 470 PNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK 529
           P SME       FQ++++        +G G+ G VY+   +L    + +   +L+ + E 
Sbjct: 2   PGSME------NFQKVEK--------IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG 47
Query: 530 TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQ 589
                + E+ ++   +H N+V+LL     E+K  LV+E + +  L  F+         + 
Sbjct: 48  VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLP 106
Query: 590 RVEIAL-GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK 648
            ++  L  + +GL + H     +++H D+KPQN+L     ++T    K++DFG+++    
Sbjct: 107 LIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLL-----INTEGAIKLADFGLARAFGV 158
Query: 649 DQTRTDTNMRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              RT  +   T+ Y APE L      +T VD++S G +  E++  R
Sbjct: 159 -PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +D    N E    L+I+ +  
Sbjct: 56  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLD 109
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 110 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 168
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 169 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 219
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 220 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +D    N E    L+I+ +  
Sbjct: 97  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLD 150
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 151 HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 209
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 210 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 260
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 261 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+   V R +  L   +    +   +K   + +++   E +I     H N+VRL   
Sbjct: 30  LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 556 CSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
            SEE    L+++L+  G L     +   + E      +Q++         +L+ H+    
Sbjct: 90  ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQI------LEAVLHCHQ---M 140
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
            ++H D+KP+N+LL  K        K++DFG++  +  +Q +      GT GY++PE LR
Sbjct: 141 GVVHRDLKPENLLLASKL--KGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLR 197
Query: 671 NVPVTTKVDVFSFGVMLLEIICG 693
             P    VD+++ GV+L  ++ G
Sbjct: 198 KDPYGKPVDLWACGVILYILLVG 220

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 39  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 97  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 155
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 156 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D+++ G ++ +++ G
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAG 233

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +D    N E    L+I+ +  
Sbjct: 31  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLD 84
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 85  HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 143
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 144 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 194
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 195 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 90/179 (50%), Gaps = 15/179 (8%)
Query: 518 IAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTL 574
           +AVK L++    +    +  E++I+   +H+++V+  G C ++ ++   LV E +P G+L
Sbjct: 41  VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 100
Query: 575 SNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM 634
            ++L       G  Q +  A  +  G+ YLH +     IH  +  +NVLLD      + +
Sbjct: 101 RDYLPRHCV--GLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLD-----NDRL 150
Query: 635 AKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            KI DFG++K +    +  R   +    + + APE L+        DV+SFGV L E++
Sbjct: 151 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 28/222 (12%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           ELQE       ++G+G++  V       K  ++ I    LEK  + + +E + E++ + +
Sbjct: 13  ELQE-------VIGSGATAVVQAAYCAPKKEKVAIKRINLEK-CQTSMDELLKEIQAMSQ 64
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFH---EGQ-RPGWVQRVEIAL---G 596
            HH N+V        +D+  LV +L+  G++ + + H   +G+ + G +    IA     
Sbjct: 65  CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 124
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           V  GL YLH+  +   IH D+K  N+L     L  +   +I+DFG+S  L      T   
Sbjct: 125 VLEGLEYLHKNGQ---IHRDVKAGNIL-----LGEDGSVQIADFGVSAFLATGGDITRNK 176
Query: 657 MR----GTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICG 693
           +R    GT  ++APE +  V     K D++SFG+  +E+  G
Sbjct: 177 VRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 34  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 92  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 150
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 151 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D+++ G ++ +++ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKL--EKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +G G+   V R +   K T +E A K +  +K   +  ++   E +I  +  H N+VRL 
Sbjct: 14  LGKGAFSVVRRCVH--KTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 554 GFCSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
               EE    LV++L+  G L     +   + E      +Q++         + Y H   
Sbjct: 72  DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI------LESIAYCHS-- 123
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
              I+H ++KP+N+LL  K        K++DFG++  +N  +        GT GY++PE 
Sbjct: 124 -NGIVHRNLKPENLLLASKA--KGAAVKLADFGLAIEVNDSEAWH--GFAGTPGYLSPEV 178
Query: 669 LRNVPVTTKVDVFSFGVMLLEIICG 693
           L+  P +  VD+++ GV+L  ++ G
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVG 203

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 13  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGH 71
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
             E + + L  E    G L + +  + G      QR    L    G++YLH      I H
Sbjct: 72  RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG---IGITH 126
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMGYVAPEWLRNVP 673
            DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ YVAPE L+   
Sbjct: 127 RDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 181
Query: 674 VTTK-VDVFSFGVMLLEIICG 693
              + VDV+S G++L  ++ G
Sbjct: 182 FHAEPVDVWSCGIVLTAMLAG 202

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 36  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 94  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 152
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 153 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D+++ G ++ +++ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 34  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 92  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 150
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 151 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D+++ G ++ +++ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 90/179 (50%), Gaps = 15/179 (8%)
Query: 518 IAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTL 574
           +AVK L++    +    +  E++I+   +H+++V+  G C ++ ++   LV E +P G+L
Sbjct: 40  VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 99
Query: 575 SNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM 634
            ++L       G  Q +  A  +  G+ YLH +     IH  +  +NVLLD      + +
Sbjct: 100 RDYLPRHCV--GLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLD-----NDRL 149
Query: 635 AKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            KI DFG++K +    +  R   +    + + APE L+        DV+SFGV L E++
Sbjct: 150 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 111/226 (49%), Gaps = 25/226 (11%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILR-------LKDTQIEIAVKKLEKDIEKTNEE 533
            F +++     F++ +G G+  K+++G+ R       L +T  E+ +K L+K     +E 
Sbjct: 1   VFHKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHET--EVLLKVLDKAHRNYSES 58
Query: 534 FMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEI 593
           F     ++ +  HK+LV   G C   D+ +LV E +  G+L  +L         + ++E+
Sbjct: 59  FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEV 118
Query: 594 ALGVARGLLYLHEECETQIIHCDIKPQNVLL----DLKTLDTNYMAKISDFGIS-KLLNK 648
           A  +A  + +L    E  +IH ++  +N+LL    D KT +  ++ K+SD GIS  +L K
Sbjct: 119 AKQLAWAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISITVLPK 174
Query: 649 DQTRTDTNMRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICG 693
           D       ++  + +V PE + N   +    D +SFG  L EI  G
Sbjct: 175 DI------LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 36  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 94  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 152
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 153 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D+++ G ++ +++ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGH 72
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
             E + + L  E    G L + +  + G      QR    L    G++YLH      I H
Sbjct: 73  RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG---IGITH 127
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMGYVAPEWLRNVP 673
            DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ YVAPE L+   
Sbjct: 128 RDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 674 VTTK-VDVFSFGVMLLEIICG 693
              + VDV+S G++L  ++ G
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAG 203

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKL--EKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +G G+   V R +   K T +E A K +  +K   +  ++   E +I  +  H N+VRL 
Sbjct: 14  LGKGAFSVVRRCVH--KTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 554 GFCSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
               EE    LV++L+  G L     +   + E      +Q++         + Y H   
Sbjct: 72  DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI------LESIAYCHS-- 123
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
              I+H ++KP+N+LL  K        K++DFG++  +N  +        GT GY++PE 
Sbjct: 124 -NGIVHRNLKPENLLLASKA--KGAAVKLADFGLAIEVNDSEAWH--GFAGTPGYLSPEV 178
Query: 669 LRNVPVTTKVDVFSFGVMLLEIICG 693
           L+  P +  VD+++ GV+L  ++ G
Sbjct: 179 LKKDPYSKPVDIWACGVILYILLVG 203

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 37  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 95  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 153
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 154 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D+++ G ++ +++ G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGH 73
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
             E + + L  E    G L + +  + G      QR    L    G++YLH      I H
Sbjct: 74  RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHG---IGITH 128
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMGYVAPEWLRNVP 673
            DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ YVAPE L+   
Sbjct: 129 RDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 674 VTTK-VDVFSFGVMLLEIICG 693
              + VDV+S G++L  ++ G
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAG 204

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKL--EKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +G G+   V R +   K T +E A K +  +K   +  ++   E +I  +  H N+VRL 
Sbjct: 13  LGKGAFSVVRRCVH--KTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 554 GFCSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
               EE    LV++L+  G L     +   + E      +Q++         + Y H   
Sbjct: 71  DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI------LESIAYCHS-- 122
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
              I+H ++KP+N+LL  K        K++DFG++  +N  +        GT GY++PE 
Sbjct: 123 -NGIVHRNLKPENLLLASKA--KGAAVKLADFGLAIEVNDSEAWH--GFAGTPGYLSPEV 177
Query: 669 LRNVPVTTKVDVFSFGVMLLEIICG 693
           L+  P +  VD+++ GV+L  ++ G
Sbjct: 178 LKKDPYSKPVDIWACGVILYILLVG 202

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGH 72
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
             E + + L  E    G L + +  + G      QR    L    G++YLH      I H
Sbjct: 73  RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG---IGITH 127
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMGYVAPEWLRNVP 673
            DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ YVAPE L+   
Sbjct: 128 RDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 674 VTTK-VDVFSFGVMLLEIICG 693
              + VDV+S G++L  ++ G
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAG 203

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +D    N E    L+I+ +  
Sbjct: 37  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLD 90
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 91  HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 149
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 150 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 200
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 201 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 37  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 95  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 153
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 154 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D+++ G ++ +++ G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +D    N E    L+I+ +  
Sbjct: 22  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLD 75
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 76  HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 134
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 135 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 185
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 186 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +D    N E    L+I+ +  
Sbjct: 30  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLD 83
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 84  HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 143 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 193
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 194 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGH 72
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
             E + + L  E    G L + +  + G      QR    L    G++YLH      I H
Sbjct: 73  RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL--MAGVVYLHG---IGITH 127
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMGYVAPEWLRNVP 673
            DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ YVAPE L+   
Sbjct: 128 RDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 674 VTTK-VDVFSFGVMLLEIICG 693
              + VDV+S G++L  ++ G
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAG 203

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGH 72
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
             E + + L  E    G L + +  + G      QR    L    G++YLH      I H
Sbjct: 73  RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG---IGITH 127
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMGYVAPEWLRNVP 673
            DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ YVAPE L+   
Sbjct: 128 RDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 674 VTTK-VDVFSFGVMLLEIICG 693
              + VDV+S G++L  ++ G
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAG 203

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 14  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGH 72
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
             E + + L  E    G L + +  + G      QR    L    G++YLH      I H
Sbjct: 73  RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG---IGITH 127
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMGYVAPEWLRNVP 673
            DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ YVAPE L+   
Sbjct: 128 RDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 182
Query: 674 VTTK-VDVFSFGVMLLEIICG 693
              + VDV+S G++L  ++ G
Sbjct: 183 FHAEPVDVWSCGIVLTAMLAG 203

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 36  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 94  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 152
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 153 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D+++ G ++ +++ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 34  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 92  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 150
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 151 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D+++ G ++ +++ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 104/206 (50%), Gaps = 16/206 (7%)
Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-NEEFMTELKIIGRTHHKN 548
           F K+  +G G+ G V++  +  K + + +A K +  +I+     + + EL+++   +   
Sbjct: 11  FEKISELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           +V   G    + +  +  E M  G+L   L   G+ P  +   ++++ V +GL YL E+ 
Sbjct: 69  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREK- 126
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
             +I+H D+KP N+L     +++    K+ DFG+S  L  +         GT  Y++PE 
Sbjct: 127 -HKIMHRDVKPSNIL-----VNSRGEIKLCDFGVSGQLIDEMA---NEFVGTRSYMSPER 177
Query: 669 LRNVPVTTKVDVFSFGVMLLEIICGR 694
           L+    + + D++S G+ L+E+  GR
Sbjct: 178 LQGTHYSVQSDIWSMGLSLVEMAVGR 203

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
Query: 537 ELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG 596
           E+ I+ + HH  L+ L     ++ + +L+ E +  G L + +  E  +    + +     
Sbjct: 98  EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ 157
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
              GL ++HE     I+H DIKP+N++ + K   +    KI DFG++  LN D+    T 
Sbjct: 158 ACEGLKHMHEHS---IVHLDIKPENIMCETKKASS---VKIIDFGLATKLNPDEIVKVTT 211
Query: 657 MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
              T  + APE +   PV    D+++ GV+   ++ G
Sbjct: 212 --ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+V   + R+ +  + + +  +++ ++   E    E+ I    +H+N+V+  G 
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKMLNHENVVKFYGH 73
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
             E + + L  E    G L + +  + G      QR    L    G++YLH      I H
Sbjct: 74  RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG---IGITH 128
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-KDQTRTDTNMRGTMGYVAPEWLRNVP 673
            DIKP+N+LLD +        KISDFG++ +    ++ R    M GT+ YVAPE L+   
Sbjct: 129 RDIKPENLLLDERD-----NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE 183
Query: 674 VTTK-VDVFSFGVMLLEIICG 693
              + VDV+S G++L  ++ G
Sbjct: 184 FHAEPVDVWSCGIVLTAMLAG 204

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +D    N E    L+I+ +  
Sbjct: 26  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLD 79
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 80  HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 138
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 139 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 189
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 190 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +D    N E    L+I+ +  
Sbjct: 18  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLD 71
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 72  HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 131 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 181
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +D    N E    L+I+ +  
Sbjct: 30  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLD 83
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 84  HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 143 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 193
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 194 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 104/206 (50%), Gaps = 16/206 (7%)
Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-NEEFMTELKIIGRTHHKN 548
           F K+  +G G+ G V++  +  K + + +A K +  +I+     + + EL+++   +   
Sbjct: 8   FEKISELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           +V   G    + +  +  E M  G+L   L   G+ P  +   ++++ V +GL YL E+ 
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREK- 123
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
             +I+H D+KP N+L     +++    K+ DFG+S  L      +     GT  Y++PE 
Sbjct: 124 -HKIMHRDVKPSNIL-----VNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPER 174
Query: 669 LRNVPVTTKVDVFSFGVMLLEIICGR 694
           L+    + + D++S G+ L+E+  GR
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 104/206 (50%), Gaps = 16/206 (7%)
Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-NEEFMTELKIIGRTHHKN 548
           F K+  +G G+ G V++  +  K + + +A K +  +I+     + + EL+++   +   
Sbjct: 8   FEKISELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           +V   G    + +  +  E M  G+L   L   G+ P  +   ++++ V +GL YL E+ 
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREK- 123
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
             +I+H D+KP N+L     +++    K+ DFG+S  L      +     GT  Y++PE 
Sbjct: 124 -HKIMHRDVKPSNIL-----VNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPER 174
Query: 669 LRNVPVTTKVDVFSFGVMLLEIICGR 694
           L+    + + D++S G+ L+E+  GR
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +D    N E    L+I+ +  
Sbjct: 18  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLD 71
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 72  HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 131 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 181
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 28/222 (12%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           ELQE       ++G+G++  V       K  ++ I    LEK  + + +E + E++ + +
Sbjct: 18  ELQE-------VIGSGATAVVQAAYCAPKKEKVAIKRINLEK-CQTSMDELLKEIQAMSQ 69
Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFH---EGQ-RPGWVQRVEIAL---G 596
            HH N+V        +D+  LV +L+  G++ + + H   +G+ + G +    IA     
Sbjct: 70  CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           V  GL YLH+  +   IH D+K  N+L     L  +   +I+DFG+S  L      T   
Sbjct: 130 VLEGLEYLHKNGQ---IHRDVKAGNIL-----LGEDGSVQIADFGVSAFLATGGDITRNK 181
Query: 657 MR----GTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICG 693
           +R    GT  ++APE +  V     K D++SFG+  +E+  G
Sbjct: 182 VRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 36  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 94  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 152
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 153 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D+++ G ++ +++ G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +D    N E    L+I+ +  
Sbjct: 18  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLD 71
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 72  HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 131 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 181
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 510 RLKDTQIEIAVKKLEKDIEKTN------EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T ++ A K ++K   K++      E+   E+ I+    H N++ L      +   +
Sbjct: 31  REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90
Query: 564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVL 623
           L+ EL+  G L +FL  E +     +  E    +  G+ YLH     QI H D+KP+N++
Sbjct: 91  LILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIM 146
Query: 624 LDLKTLDTNY---MAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDV 680
           L    LD N      KI DFG++  +  D      N+ GT  +VAPE +   P+  + D+
Sbjct: 147 L----LDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 681 FSFGVMLLEIICG 693
           +S GV+   ++ G
Sbjct: 201 WSIGVITYILLSG 213

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 105/221 (47%), Gaps = 32/221 (14%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKI-IGRTH 545
             K +G G+ G+V      GI +   T   +AVK L E      +   M+ELKI I   H
Sbjct: 31  LGKPLGRGAFGQVIEADAFGIDKTA-TXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 546 HKNLVRLLGFCSEEDKRLLV-YELMPNGTLSNFLFHEGQRPGWV-------------QRV 591
           H N+V LLG C++    L+V  E    G LS +L    +R  +V               +
Sbjct: 90  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 592 EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT 651
             +  VA+G+ +L      + IH D+  +N+LL  K +      KI DFG+++ + KD  
Sbjct: 148 XYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNV-----VKIXDFGLARDIYKDPD 199
Query: 652 RTDT-NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
                + R  + ++APE + +   T + DV+SFGV+L EI 
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 240

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 104/206 (50%), Gaps = 16/206 (7%)
Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-NEEFMTELKIIGRTHHKN 548
           F K+  +G G+ G V++  +  K + + +A K +  +I+     + + EL+++   +   
Sbjct: 8   FEKISELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           +V   G    + +  +  E M  G+L   L   G+ P  +   ++++ V +GL YL E+ 
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREK- 123
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
             +I+H D+KP N+L     +++    K+ DFG+S  L      +     GT  Y++PE 
Sbjct: 124 -HKIMHRDVKPSNIL-----VNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPER 174
Query: 669 LRNVPVTTKVDVFSFGVMLLEIICGR 694
           L+    + + D++S G+ L+E+  GR
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 510 RLKDTQIEIAVKKLEKDIEKTN------EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T ++ A K ++K   K++      E+   E+ I+    H N++ L      +   +
Sbjct: 30  REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 89
Query: 564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVL 623
           L+ EL+  G L +FL  E +     +  E    +  G+ YLH     QI H D+KP+N++
Sbjct: 90  LILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIM 145
Query: 624 LDLKTLDTNY---MAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDV 680
           L    LD N      KI DFG++  +  D      N+ GT  +VAPE +   P+  + D+
Sbjct: 146 L----LDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 199
Query: 681 FSFGVMLLEIICG 693
           +S GV+   ++ G
Sbjct: 200 WSIGVITYILLSG 212

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 510 RLKDTQIEIAVKKLEKDIEKTN------EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T ++ A K ++K   K++      E+   E+ I+    H N++ L      +   +
Sbjct: 31  REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90
Query: 564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVL 623
           L+ EL+  G L +FL  E +     +  E    +  G+ YLH     QI H D+KP+N++
Sbjct: 91  LILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIM 146
Query: 624 LDLKTLDTNY---MAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDV 680
           L    LD N      KI DFG++  +  D      N+ GT  +VAPE +   P+  + D+
Sbjct: 147 L----LDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 681 FSFGVMLLEIICG 693
           +S GV+   ++ G
Sbjct: 201 WSIGVITYILLSG 213

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 510 RLKDTQIEIAVKKLEKDIEKTN------EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T ++ A K ++K   K++      E+   E+ I+    H N++ L      +   +
Sbjct: 31  REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90
Query: 564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVL 623
           L+ EL+  G L +FL  E +     +  E    +  G+ YLH     QI H D+KP+N++
Sbjct: 91  LILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIM 146
Query: 624 LDLKTLDTNY---MAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDV 680
           L    LD N      KI DFG++  +  D      N+ GT  +VAPE +   P+  + D+
Sbjct: 147 L----LDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 681 FSFGVMLLEIICG 693
           +S GV+   ++ G
Sbjct: 201 WSIGVITYILLSG 213

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 496 VGTGSSGKVYRGILRLKDTQ-IEIAVKKLEKDIEKTNE---EFMTELKIIGRTHHKNLVR 551
           +G GS G V RG       + + +AVK L+ D+    E   +F+ E+  +    H+NL+R
Sbjct: 26  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLF-HEGQ-RPGWVQRVEIALGVARGLLYLHEECE 609
           L G       + +V EL P G+L + L  H+G    G + R   A+ VA G+ YL  +  
Sbjct: 86  LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK-- 140
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPE 667
            + IH D+  +N+L     L T  + KI DFG+ + L  N D      + +    + APE
Sbjct: 141 -RFIHRDLAARNLL-----LATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 194
Query: 668 WLRNVPVTTKVDVFSFGVMLLEII 691
            L+    +   D + FGV L E+ 
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMF 218

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 510 RLKDTQIEIAVKKLEKDIEKTN------EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T ++ A K ++K   K++      E+   E+ I+    H N++ L      +   +
Sbjct: 30  REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 89
Query: 564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVL 623
           L+ EL+  G L +FL  E +     +  E    +  G+ YLH     QI H D+KP+N++
Sbjct: 90  LILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIM 145
Query: 624 LDLKTLDTNY---MAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDV 680
           L    LD N      KI DFG++  +  D      N+ GT  +VAPE +   P+  + D+
Sbjct: 146 L----LDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 199
Query: 681 FSFGVMLLEIICG 693
           +S GV+   ++ G
Sbjct: 200 WSIGVITYILLSG 212

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 33  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 91  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 149
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 150 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D+++ G ++ +++ G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKL--EKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +G G+   V R +   K T +E A K +  +K   +  ++   E +I  +  H N+VRL 
Sbjct: 37  LGKGAFSVVRRCVH--KTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 554 GFCSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
               EE    LV++L+  G L     +   + E      +Q++         + Y H   
Sbjct: 95  DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI------LESIAYCHS-- 146
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
              I+H ++KP+N+LL  K        K++DFG++  +N  +        GT GY++PE 
Sbjct: 147 -NGIVHRNLKPENLLLASKA--KGAAVKLADFGLAIEVNDSEAWH--GFAGTPGYLSPEV 201
Query: 669 LRNVPVTTKVDVFSFGVMLLEIICG 693
           L+  P +  VD+++ GV+L  ++ G
Sbjct: 202 LKKDPYSKPVDIWACGVILYILLVG 226

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +D    N E    L+I+ +  
Sbjct: 19  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLD 72
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 73  HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 131
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 132 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 182
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 183 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 74  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 129
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT  +   T+ Y APE L     
Sbjct: 130 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRR 204

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 104/206 (50%), Gaps = 16/206 (7%)
Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-NEEFMTELKIIGRTHHKN 548
           F K+  +G G+ G V++  +  K + + +A K +  +I+     + + EL+++   +   
Sbjct: 70  FEKISELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           +V   G    + +  +  E M  G+L   L   G+ P  +   ++++ V +GL YL E+ 
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREK- 185
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
             +I+H D+KP N+L     +++    K+ DFG+S  L      +     GT  Y++PE 
Sbjct: 186 -HKIMHRDVKPSNIL-----VNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPER 236
Query: 669 LRNVPVTTKVDVFSFGVMLLEIICGR 694
           L+    + + D++S G+ L+E+  GR
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGR 262

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 104/206 (50%), Gaps = 16/206 (7%)
Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-NEEFMTELKIIGRTHHKN 548
           F K+  +G G+ G V++  +  K + + +A K +  +I+     + + EL+++   +   
Sbjct: 8   FEKISELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           +V   G    + +  +  E M  G+L   L   G+ P  +   ++++ V +GL YL E+ 
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREK- 123
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
             +I+H D+KP N+L     +++    K+ DFG+S  L      +     GT  Y++PE 
Sbjct: 124 -HKIMHRDVKPSNIL-----VNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPER 174
Query: 669 LRNVPVTTKVDVFSFGVMLLEIICGR 694
           L+    + + D++S G+ L+E+  GR
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 104/206 (50%), Gaps = 16/206 (7%)
Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-NEEFMTELKIIGRTHHKN 548
           F K+  +G G+ G V++  +  K + + +A K +  +I+     + + EL+++   +   
Sbjct: 8   FEKISELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           +V   G    + +  +  E M  G+L   L   G+ P  +   ++++ V +GL YL E+ 
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREK- 123
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
             +I+H D+KP N+L     +++    K+ DFG+S  L      +     GT  Y++PE 
Sbjct: 124 -HKIMHRDVKPSNIL-----VNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPER 174
Query: 669 LRNVPVTTKVDVFSFGVMLLEIICGR 694
           L+    + + D++S G+ L+E+  GR
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGR 200

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKI-IGRTH 545
             K +G G+ G+V      GI +   T   +AVK L E      +   M+ELKI I   H
Sbjct: 31  LGKPLGRGAFGQVIEADAFGIDKTA-TXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 546 HKNLVRLLGFCSEEDKRLLV-YELMPNGTLSNFLFHEGQRPGWVQRVEI----------- 593
           H N+V LLG C++    L+V  E    G LS +L    +R  +V   ++           
Sbjct: 90  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 594 --ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT 651
             +  VA+G+ +L      + IH D+  +N+LL  K +      KI DFG+++ + KD  
Sbjct: 148 CYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNV-----VKICDFGLARDIYKDPD 199
Query: 652 RTDT-NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
                + R  + ++APE + +   T + DV+SFGV+L EI 
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 240

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L +F+         +  ++  L  + +GL + H     +++H
Sbjct: 74  IHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 129
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT  +   T+ Y APE L     
Sbjct: 130 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRR 204

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 70  IHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 125
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT T+   T+ Y APE L     
Sbjct: 126 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 510 RLKDTQIEIAVKKLEKDIEKTN------EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T ++ A K ++K   K++      E+   E+ I+    H N++ L      +   +
Sbjct: 31  REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90
Query: 564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVL 623
           L+ EL+  G L +FL  E +     +  E    +  G+ YLH     QI H D+KP+N++
Sbjct: 91  LILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIM 146
Query: 624 LDLKTLDTNY---MAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDV 680
           L    LD N      KI DFG++  +  D      N+ GT  +VAPE +   P+  + D+
Sbjct: 147 L----LDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 681 FSFGVMLLEIICG 693
           +S GV+   ++ G
Sbjct: 201 WSIGVITYILLSG 213

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 510 RLKDTQIEIAVKKLEKDIEKTN------EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T ++ A K ++K   K++      E+   E+ I+    H N++ L      +   +
Sbjct: 31  REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90
Query: 564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVL 623
           L+ EL+  G L +FL  E +     +  E    +  G+ YLH     QI H D+KP+N++
Sbjct: 91  LILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIM 146
Query: 624 LDLKTLDTNY---MAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDV 680
           L    LD N      KI DFG++  +  D      N+ GT  +VAPE +   P+  + D+
Sbjct: 147 L----LDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 681 FSFGVMLLEIICG 693
           +S GV+   ++ G
Sbjct: 201 WSIGVITYILLSG 213

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 72  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 127
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT  +   T+ Y APE L     
Sbjct: 128 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRR 202

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L +F+         +  ++  L  + +GL + H     +++H
Sbjct: 73  IHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 128
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT  +   T+ Y APE L     
Sbjct: 129 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRR 203

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 71  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 126
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT  +   T+ Y APE L     
Sbjct: 127 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 510 RLKDTQIEIAVKKLEKDIEKTN------EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T ++ A K ++K   K++      E+   E+ I+    H N++ L      +   +
Sbjct: 31  REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90
Query: 564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVL 623
           L+ EL+  G L +FL  E +     +  E    +  G+ YLH     QI H D+KP+N++
Sbjct: 91  LILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIM 146
Query: 624 LDLKTLDTNY---MAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDV 680
           L    LD N      KI DFG++  +  D      N+ GT  +VAPE +   P+  + D+
Sbjct: 147 L----LDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 681 FSFGVMLLEIICG 693
           +S GV+   ++ G
Sbjct: 201 WSIGVITYILLSG 213

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+   V R + +    +    +   +K   + +++   E +I     H N+VRL   
Sbjct: 39  LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
            SEE    LV++L+  G L    F +     +    + +  + + L  ++   +  I+H 
Sbjct: 99  ISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHR 154
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           D+KP+N+LL  K        K++DFG++  +  +Q +      GT GY++PE LR  P  
Sbjct: 155 DLKPENLLLASKC--KGAAVKLADFGLAIEVQGEQ-QAWFGFAGTPGYLSPEVLRKDPYG 211
Query: 676 TKVDVFSFGVMLLEIICG 693
             VD+++ GV+L  ++ G
Sbjct: 212 KPVDIWACGVILYILLVG 229

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 71  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 126
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT  +   T+ Y APE L     
Sbjct: 127 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 33  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 91  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 149
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 150 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D+++ G ++ +++ G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 15  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 75  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 130
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT  +   T+ Y APE L     
Sbjct: 131 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 184
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 185 YSTAVDIWSLGCIFAEMVTRR 205

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 510 RLKDTQIEIAVKKLEKDIEKTN------EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T ++ A K ++K   K++      E+   E+ I+    H N++ L      +   +
Sbjct: 31  REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90
Query: 564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVL 623
           L+ EL+  G L +FL  E +     +  E    +  G+ YLH     QI H D+KP+N++
Sbjct: 91  LILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIM 146
Query: 624 LDLKTLDTNY---MAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDV 680
           L    LD N      KI DFG++  +  D      N+ GT  +VAPE +   P+  + D+
Sbjct: 147 L----LDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 681 FSFGVMLLEIICG 693
           +S GV+   ++ G
Sbjct: 201 WSIGVITYILLSG 213

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 510 RLKDTQIEIAVKKLEKDIEKTN------EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T ++ A K ++K   K++      E+   E+ I+    H N++ L      +   +
Sbjct: 31  REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90
Query: 564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVL 623
           L+ EL+  G L +FL  E +     +  E    +  G+ YLH     QI H D+KP+N++
Sbjct: 91  LILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIM 146
Query: 624 LDLKTLDTNY---MAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDV 680
           L    LD N      KI DFG++  +  D      N+ GT  +VAPE +   P+  + D+
Sbjct: 147 L----LDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 681 FSFGVMLLEIICG 693
           +S GV+   ++ G
Sbjct: 201 WSIGVITYILLSG 213

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 496 VGTGSSGKVYRGILRLKDTQ-IEIAVKKLEKDIEKTNE---EFMTELKIIGRTHHKNLVR 551
           +G GS G V RG       + + +AVK L+ D+    E   +F+ E+  +    H+NL+R
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLF-HEGQ-RPGWVQRVEIALGVARGLLYLHEECE 609
           L G       + +V EL P G+L + L  H+G    G + R   A+ VA G+ YL  +  
Sbjct: 76  LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK-- 130
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPE 667
            + IH D+  +N+L     L T  + KI DFG+ + L  N D      + +    + APE
Sbjct: 131 -RFIHRDLAARNLL-----LATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 184
Query: 668 WLRNVPVTTKVDVFSFGVMLLEII 691
            L+    +   D + FGV L E+ 
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMF 208

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 18  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 76  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 134
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 135 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D+++ G ++ +++ G
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAG 212

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 71  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 126
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT  +   T+ Y APE L     
Sbjct: 127 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 510 RLKDTQIEIAVKKLEKDIEKTN------EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T ++ A K ++K   K++      E+   E+ I+    H N++ L      +   +
Sbjct: 31  REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90
Query: 564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVL 623
           L+ EL+  G L +FL  E +     +  E    +  G+ YLH     QI H D+KP+N++
Sbjct: 91  LILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIM 146
Query: 624 LDLKTLDTNY---MAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDV 680
           L    LD N      KI DFG++  +  D      N+ GT  +VAPE +   P+  + D+
Sbjct: 147 L----LDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 681 FSFGVMLLEIICG 693
           +S GV+   ++ G
Sbjct: 201 WSIGVITYILLSG 213

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 72  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 127
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT  +   T+ Y APE L     
Sbjct: 128 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRR 202

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 71  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 126
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT  +   T+ Y APE L     
Sbjct: 127 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 13  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 71  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 129
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 130 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D+++ G ++ +++ G
Sbjct: 182 LLTEKSACKSSDLWALGCIIYQLVAG 207

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 11  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 69  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 127
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 128 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D+++ G ++ +++ G
Sbjct: 180 LLTEKSACKSSDLWALGCIIYQLVAG 205

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 12  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 70  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 128
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 129 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D+++ G ++ +++ G
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAG 206

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 496 VGTGSSGKVYRGILRLKDTQ-IEIAVKKLEKDIEKTNE---EFMTELKIIGRTHHKNLVR 551
           +G GS G V RG       + + +AVK L+ D+    E   +F+ E+  +    H+NL+R
Sbjct: 20  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLF-HEGQ-RPGWVQRVEIALGVARGLLYLHEECE 609
           L G       + +V EL P G+L + L  H+G    G + R   A+ VA G+ YL  +  
Sbjct: 80  LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLESK-- 134
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPE 667
            + IH D+  +N+LL  + L      KI DFG+ + L  N D      + +    + APE
Sbjct: 135 -RFIHRDLAARNLLLATRDL-----VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 668 WLRNVPVTTKVDVFSFGVMLLEII 691
            L+    +   D + FGV L E+ 
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMF 212

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 34/223 (15%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKI-IGRTH 545
             K +G G+ G+V      GI +   T   +AVK L E      +   M+ELKI I   H
Sbjct: 33  LGKPLGRGAFGQVIEADAFGIDKTA-TXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 91
Query: 546 HKNLVRLLGFCSEEDKRLLV-YELMPNGTLSNFLFHEGQRPGWV---------------Q 589
           H N+V LLG C++    L+V  E    G LS +L    +R  +V                
Sbjct: 92  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKPEDLYKDFLTLEH 149
Query: 590 RVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
            +  +  VA+G+ +L      + IH D+  +N+LL  K +      KI DFG+++ + KD
Sbjct: 150 LIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNV-----VKICDFGLARDIXKD 201
Query: 650 QTRTDT-NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
                  + R  + ++APE + +   T + DV+SFGV+L EI 
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 121/262 (46%), Gaps = 30/262 (11%)
Query: 445 LLSGVAAIYYS---PAARGLIKRRNYFDPNSMEINFREFTFQELQEATKGFS--KLVGTG 499
           LL G+ A+ Y    PA R      N+       IN      ++L+   + +   K++G G
Sbjct: 25  LLDGLDALVYDLDFPALRKNKNIDNFLSRYKDTIN----KIRDLRMKAEDYEVVKVIGRG 80
Query: 500 SSGKVYRGILRLKDTQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKNLVRLLGFCS 557
           + G+V   ++R K T+   A+K L K   I++++  F  E + I    +   V  L +  
Sbjct: 81  AFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF 138
Query: 558 EEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCD 616
           ++D+ L +V E MP G L N + +      W +        A  +L L        IH D
Sbjct: 139 QDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWAR-----FYTAEVVLALDAIHSMGFIHRD 193
Query: 617 IKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD-QTRTDTNMRGTMGYVAPEWLRNVP-- 673
           +KP N+LLD      +   K++DFG    +NK+   R DT + GT  Y++PE L++    
Sbjct: 194 VKPDNMLLD-----KSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 247
Query: 674 --VTTKVDVFSFGVMLLEIICG 693
                + D +S GV L E++ G
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVG 269

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 510 RLKDTQIEIAVKKLEKDIEKTN------EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T ++ A K ++K   K++      E+   E+ I+    H N++ L      +   +
Sbjct: 31  REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90
Query: 564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVL 623
           L+ EL+  G L +FL  E +     +  E    +  G+ YLH     QI H D+KP+N++
Sbjct: 91  LILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIM 146
Query: 624 LDLKTLDTNY---MAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDV 680
           L    LD N      KI DFG++  +  D      N+ GT  +VAPE +   P+  + D+
Sbjct: 147 L----LDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 681 FSFGVMLLEIICG 693
           +S GV+   ++ G
Sbjct: 201 WSIGVITYILLSG 213

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 14  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 72  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 130
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 131 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D+++ G ++ +++ G
Sbjct: 183 LLTEKSACKSSDLWALGCIIYQLVAG 208

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 70  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 125
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT  +   T+ Y APE L     
Sbjct: 126 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 121/262 (46%), Gaps = 30/262 (11%)
Query: 445 LLSGVAAIYYS---PAARGLIKRRNYFDPNSMEINFREFTFQELQEATKGFS--KLVGTG 499
           LL G+ A+ Y    PA R      N+       IN      ++L+   + +   K++G G
Sbjct: 30  LLDGLDALVYDLDFPALRKNKNIDNFLSRYKDTIN----KIRDLRMKAEDYEVVKVIGRG 85
Query: 500 SSGKVYRGILRLKDTQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKNLVRLLGFCS 557
           + G+V   ++R K T+   A+K L K   I++++  F  E + I    +   V  L +  
Sbjct: 86  AFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF 143
Query: 558 EEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCD 616
           ++D+ L +V E MP G L N + +      W +        A  +L L        IH D
Sbjct: 144 QDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWAR-----FYTAEVVLALDAIHSMGFIHRD 198
Query: 617 IKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD-QTRTDTNMRGTMGYVAPEWLRNVP-- 673
           +KP N+LLD      +   K++DFG    +NK+   R DT + GT  Y++PE L++    
Sbjct: 199 VKPDNMLLD-----KSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 252
Query: 674 --VTTKVDVFSFGVMLLEIICG 693
                + D +S GV L E++ G
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVG 274

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 496 VGTGSSGKVYRGILRLKDTQ-IEIAVKKLEKDIEKTNE---EFMTELKIIGRTHHKNLVR 551
           +G GS G V RG       + + +AVK L+ D+    E   +F+ E+  +    H+NL+R
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLF-HEGQ-RPGWVQRVEIALGVARGLLYLHEECE 609
           L G       + +V EL P G+L + L  H+G    G + R   A+ VA G+ YL  +  
Sbjct: 76  LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK-- 130
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPE 667
            + IH D+  +N+L     L T  + KI DFG+ + L  N D      + +    + APE
Sbjct: 131 -RFIHRDLAARNLL-----LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 668 WLRNVPVTTKVDVFSFGVMLLEII 691
            L+    +   D + FGV L E+ 
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMF 208

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 496 VGTGSSGKVYRGILRLKDTQ-IEIAVKKLEKDIEKTNE---EFMTELKIIGRTHHKNLVR 551
           +G GS G V RG       + + +AVK L+ D+    E   +F+ E+  +    H+NL+R
Sbjct: 26  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLF-HEGQ-RPGWVQRVEIALGVARGLLYLHEECE 609
           L G       + +V EL P G+L + L  H+G    G + R   A+ VA G+ YL  +  
Sbjct: 86  LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK-- 140
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPE 667
            + IH D+  +N+L     L T  + KI DFG+ + L  N D      + +    + APE
Sbjct: 141 -RFIHRDLAARNLL-----LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194
Query: 668 WLRNVPVTTKVDVFSFGVMLLEII 691
            L+    +   D + FGV L E+ 
Sbjct: 195 SLKTRTFSHASDTWMFGVTLWEMF 218

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 70  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 125
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KPQN+L     ++T    K++DFG+++       RT  +   T+ Y APE L     
Sbjct: 126 RDLKPQNLL-----INTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 179
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRR 200

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 121/262 (46%), Gaps = 30/262 (11%)
Query: 445 LLSGVAAIYYS---PAARGLIKRRNYFDPNSMEINFREFTFQELQEATKGFS--KLVGTG 499
           LL G+ A+ Y    PA R      N+       IN      ++L+   + +   K++G G
Sbjct: 30  LLDGLDALVYDLDFPALRKNKNIDNFLSRYKDTIN----KIRDLRMKAEDYEVVKVIGRG 85
Query: 500 SSGKVYRGILRLKDTQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKNLVRLLGFCS 557
           + G+V   ++R K T+   A+K L K   I++++  F  E + I    +   V  L +  
Sbjct: 86  AFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF 143
Query: 558 EEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCD 616
           ++D+ L +V E MP G L N + +      W +        A  +L L        IH D
Sbjct: 144 QDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWAR-----FYTAEVVLALDAIHSMGFIHRD 198
Query: 617 IKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD-QTRTDTNMRGTMGYVAPEWLRNVP-- 673
           +KP N+LLD      +   K++DFG    +NK+   R DT + GT  Y++PE L++    
Sbjct: 199 VKPDNMLLD-----KSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 252
Query: 674 --VTTKVDVFSFGVMLLEIICG 693
                + D +S GV L E++ G
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVG 274

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 109/227 (48%), Gaps = 26/227 (11%)
Query: 470 PNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK 529
           P SME       FQ++++        +G G+ G VY+   +L    + +   +L+ + E 
Sbjct: 1   PGSME------NFQKVEK--------IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG 46
Query: 530 TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQ 589
                + E+ ++   +H N+V+LL     E+K  LV+E + +  L  F+         + 
Sbjct: 47  VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLP 105
Query: 590 RVEIAL-GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK 648
            ++  L  + +GL + H     +++H D+KP+N+L     ++T    K++DFG+++    
Sbjct: 106 LIKSYLFQLLQGLAFCHSH---RVLHRDLKPENLL-----INTEGAIKLADFGLARAFGV 157
Query: 649 DQTRTDTNMRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              RT  +   T+ Y APE L      +T VD++S G +  E++  R
Sbjct: 158 -PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 496 VGTGSSGKVYRGILRLKDTQ-IEIAVKKLEKDIEKTNE---EFMTELKIIGRTHHKNLVR 551
           +G GS G V RG       + + +AVK L+ D+    E   +F+ E+  +    H+NL+R
Sbjct: 20  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLF-HEGQ-RPGWVQRVEIALGVARGLLYLHEECE 609
           L G       + +V EL P G+L + L  H+G    G + R   A+ VA G+ YL  +  
Sbjct: 80  LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK-- 134
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPE 667
            + IH D+  +N+L     L T  + KI DFG+ + L  N D      + +    + APE
Sbjct: 135 -RFIHRDLAARNLL-----LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
Query: 668 WLRNVPVTTKVDVFSFGVMLLEII 691
            L+    +   D + FGV L E+ 
Sbjct: 189 SLKTRTFSHASDTWMFGVTLWEMF 212

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 107/234 (45%), Gaps = 30/234 (12%)
Query: 468 FDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD- 526
           FD N  ++NF  F             + +G GS GKV   I++  DT+   A+K + K  
Sbjct: 6   FDENE-DVNFDHFEI----------LRAIGKGSFGKV--CIVQKNDTKKMYAMKYMNKQK 52
Query: 527 -IEKTN-EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR 584
            +E+        EL+I+    H  LV L     +E+   +V +L+  G L    +H  Q 
Sbjct: 53  CVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLR---YHLQQN 109
Query: 585 PGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK 644
             + +   + L +   ++ L      +IIH D+KP N+L     LD +    I+DF I+ 
Sbjct: 110 VHFKEET-VKLFICELVMALDYLQNQRIIHRDMKPDNIL-----LDEHGHVHITDFNIAA 163
Query: 645 LLNKDQTRTDTNMRGTMGYVAPEWL---RNVPVTTKVDVFSFGVMLLEIICGRR 695
           +L ++     T M GT  Y+APE     +    +  VD +S GV   E++ GRR
Sbjct: 164 MLPRETQI--TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 510 RLKDTQIEIAVKKLEKDIEKTN------EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T ++ A K ++K   K++      E+   E+ I+    H N++ L      +   +
Sbjct: 31  REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90
Query: 564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVL 623
           L+ EL+  G L +FL  E +     +  E    +  G+ YLH     QI H D+KP+N++
Sbjct: 91  LIGELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIM 146
Query: 624 LDLKTLDTNY---MAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDV 680
           L    LD N      KI DFG++  +  D      N+ GT  +VAPE +   P+  + D+
Sbjct: 147 L----LDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 681 FSFGVMLLEIICG 693
           +S GV+   ++ G
Sbjct: 201 WSIGVITYILLSG 213

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 24/213 (11%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE------FMTELKIIGRTHH 546
           SK +G+G+ G+V     R    ++ I +    K    +  E        TE++I+ + +H
Sbjct: 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 199
Query: 547 KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---Y 603
             ++++  F   ED   +V ELM  G L + +    +    ++     L   + LL   Y
Sbjct: 200 PCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKR----LKEATCKLYFYQMLLAVQY 254
Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           LHE     IIH D+KP+NVLL  +  D   + KI+DFG SK+L   +T     + GT  Y
Sbjct: 255 LHE---NGIIHRDLKPENVLLSSQEEDC--LIKITDFGHSKILG--ETSLMRTLCGTPTY 307
Query: 664 VAPEWLRNVPVT---TKVDVFSFGVMLLEIICG 693
           +APE L +V        VD +S GV+L   + G
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 496 VGTGSSGKVYRGILRLKDTQ-IEIAVKKLEKDIEKTNE---EFMTELKIIGRTHHKNLVR 551
           +G GS G V RG       + + +AVK L+ D+    E   +F+ E+  +    H+NL+R
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLF-HEGQ-RPGWVQRVEIALGVARGLLYLHEECE 609
           L G       + +V EL P G+L + L  H+G    G + R   A+ VA G+ YL  +  
Sbjct: 76  LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK-- 130
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPE 667
            + IH D+  +N+L     L T  + KI DFG+ + L  N D      + +    + APE
Sbjct: 131 -RFIHRDLAARNLL-----LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
Query: 668 WLRNVPVTTKVDVFSFGVMLLEII 691
            L+    +   D + FGV L E+ 
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMF 208

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L +F+         +  ++  L  + +GL + H     +++H
Sbjct: 71  IHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 126
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KP+N+L     ++T    K++DFG+++       RT  +   T+ Y APE L     
Sbjct: 127 RDLKPENLL-----INTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 24/213 (11%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE------FMTELKIIGRTHH 546
           SK +G+G+ G+V     R    ++ I +    K    +  E        TE++I+ + +H
Sbjct: 154 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 213
Query: 547 KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---Y 603
             ++++  F   ED   +V ELM  G L + +    +    ++     L   + LL   Y
Sbjct: 214 PCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKR----LKEATCKLYFYQMLLAVQY 268
Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           LHE     IIH D+KP+NVLL  +  D   + KI+DFG SK+L   +T     + GT  Y
Sbjct: 269 LHE---NGIIHRDLKPENVLLSSQEEDC--LIKITDFGHSKILG--ETSLMRTLCGTPTY 321
Query: 664 VAPEWLRNVPVT---TKVDVFSFGVMLLEIICG 693
           +APE L +V        VD +S GV+L   + G
Sbjct: 322 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 22/209 (10%)
Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLE-KDIEKTNEEFMTELKIIGRTHHKN 548
           F+KL  +G GS G+V++GI     TQ  +A+K ++ ++ E   E+   E+ ++ +     
Sbjct: 29  FTKLEKIGKGSFGEVFKGIDN--RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLH 605
           + +  G   ++ K  ++ E +  G+  + L      PG +   +IA     + +GL YLH
Sbjct: 87  VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLH 141
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
            E +   IH DIK  NVLL       +   K++DFG++  L   Q + +T + GT  ++A
Sbjct: 142 SEKK---IHRDIKAANVLLS-----EHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMA 192
Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           PE ++     +K D++S G+  +E+  G 
Sbjct: 193 PEVIKQSAYDSKADIWSLGITAIELARGE 221

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 26/227 (11%)
Query: 470 PNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK 529
           P SME       FQ++++        +G G+ G VY+   +L    + +   +L+ + E 
Sbjct: 2   PGSME------NFQKVEK--------IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG 47
Query: 530 TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQ 589
                + E+ ++   +H N+V+LL     E+K  LV+E + +  L  F+         + 
Sbjct: 48  VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLP 106
Query: 590 RVEIAL-GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK 648
            ++  L  + +GL + H     +++H D+KPQN+L     ++T    K++DFG+++    
Sbjct: 107 LIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLL-----INTEGAIKLADFGLARAFGV 158
Query: 649 DQTRTDTNMRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              RT  +   T+ Y APE L      +T VD++S G +  E++  R
Sbjct: 159 -PVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 104/206 (50%), Gaps = 16/206 (7%)
Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-NEEFMTELKIIGRTHHKN 548
           F K+  +G G+ G V++  +  K + + +A K +  +I+     + + EL+++   +   
Sbjct: 27  FEKISELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           +V   G    + +  +  E M  G+L   L   G+ P  +   ++++ V +GL YL E+ 
Sbjct: 85  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREK- 142
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
             +I+H D+KP N+L     +++    K+ DFG+S  L      +     GT  Y++PE 
Sbjct: 143 -HKIMHRDVKPSNIL-----VNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPER 193
Query: 669 LRNVPVTTKVDVFSFGVMLLEIICGR 694
           L+    + + D++S G+ L+E+  GR
Sbjct: 194 LQGTHYSVQSDIWSMGLSLVEMAVGR 219

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 22/209 (10%)
Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLE-KDIEKTNEEFMTELKIIGRTHHKN 548
           F+KL  +G GS G+V++GI     TQ  +A+K ++ ++ E   E+   E+ ++ +     
Sbjct: 9   FTKLEKIGKGSFGEVFKGIDN--RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLH 605
           + +  G   ++ K  ++ E +  G+  + L      PG +   +IA     + +GL YLH
Sbjct: 67  VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLH 121
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
            E +   IH DIK  NVLL       +   K++DFG++  L   Q + +T + GT  ++A
Sbjct: 122 SEKK---IHRDIKAANVLLS-----EHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMA 172
Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           PE ++     +K D++S G+  +E+  G 
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIELARGE 201

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMT-ELKIIGRTHHKN 548
           F K++G GS       + R   T  E A+K LEK   I++    ++T E  ++ R  H  
Sbjct: 34  FGKILGEGSFSTTV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G       R   A  +   L YLH + 
Sbjct: 92  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG 150
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 151 ---IIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D+++ G ++ +++ G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 13/162 (8%)
Query: 535 MTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGW--VQRVE 592
           + E +I+ + + + +V L      +D   LV  LM  G L   ++H GQ  G+   + V 
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQ-AGFPEARAVF 290
Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
            A  +  GL  LH E   +I++ D+KP+N+LLD    D  ++ +ISD G++  ++  + +
Sbjct: 291 YAAEICCGLEDLHRE---RIVYRDLKPENILLD----DHGHI-RISDLGLA--VHVPEGQ 340
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           T     GT+GY+APE ++N   T   D ++ G +L E+I G+
Sbjct: 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 104/206 (50%), Gaps = 16/206 (7%)
Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-NEEFMTELKIIGRTHHKN 548
           F K+  +G G+ G V++  +  K + + +A K +  +I+     + + EL+++   +   
Sbjct: 35  FEKISELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           +V   G    + +  +  E M  G+L   L   G+ P  +   ++++ V +GL YL E+ 
Sbjct: 93  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVIKGLTYLREK- 150
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
             +I+H D+KP N+L     +++    K+ DFG+S  L      +     GT  Y++PE 
Sbjct: 151 -HKIMHRDVKPSNIL-----VNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPER 201
Query: 669 LRNVPVTTKVDVFSFGVMLLEIICGR 694
           L+    + + D++S G+ L+E+  GR
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGR 227

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 88/162 (54%), Gaps = 13/162 (8%)
Query: 535 MTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGW--VQRVE 592
           + E +I+ + + + +V L      +D   LV  LM  G L   ++H GQ  G+   + V 
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQ-AGFPEARAVF 290
Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
            A  +  GL  LH E   +I++ D+KP+N+LLD    D  ++ +ISD G++  ++  + +
Sbjct: 291 YAAEICCGLEDLHRE---RIVYRDLKPENILLD----DHGHI-RISDLGLA--VHVPEGQ 340
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           T     GT+GY+APE ++N   T   D ++ G +L E+I G+
Sbjct: 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGI-LRLKDTQIEIAVKKLEK-DIEKTNEEFMTELKII 541
           E+Q       + +G G  G V++GI +  ++  + +A+K  +    +   E+F+ E   +
Sbjct: 11  EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 70
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +  H ++V+L+G  +E +   ++ EL   G L +FL            +  A  ++  L
Sbjct: 71  RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 129
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL  +   + +H DI  +NVL+      +N   K+ DFG+S+ +        +  +  +
Sbjct: 130 AYLESK---RFVHRDIAARNVLVS-----SNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 181
Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            ++APE +     T+  DV+ FGV + EI+
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEIL 211

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+   V R +      +    +   +K   + +++   E +I     H N+VRL   
Sbjct: 12  IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 556 CSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
            SEE    LV++L+  G L     +   + E      +Q+      +   +L+ H   + 
Sbjct: 72  ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQ------ILEAVLHCH---QM 122
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
            ++H D+KP+N+LL  K        K++DFG++  +  DQ +      GT GY++PE LR
Sbjct: 123 GVVHRDLKPENLLLASKC--KGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLR 179
Query: 671 NVPVTTKVDVFSFGVMLLEIICG 693
                  VD+++ GV+L  ++ G
Sbjct: 180 KEAYGKPVDIWACGVILYILLVG 202

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 3   KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYELM-PNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E M P   L +F+   G       + E+
Sbjct: 61  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERG-----ALQEEL 115
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 170
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 171 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGI-LRLKDTQIEIAVKKLEK-DIEKTNEEFMTELKII 541
           E+Q       + +G G  G V++GI +  ++  + +A+K  +    +   E+F+ E   +
Sbjct: 34  EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 93
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +  H ++V+L+G  +E +   ++ EL   G L +FL            +  A  ++  L
Sbjct: 94  RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 152
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL  +   + +H DI  +NVL+      +N   K+ DFG+S+ +        +  +  +
Sbjct: 153 AYLESK---RFVHRDIAARNVLVS-----SNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 204
Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            ++APE +     T+  DV+ FGV + EI+
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEIL 234

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 111/216 (51%), Gaps = 31/216 (14%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIE-IAVKKLEKDIEKTNEEFMTELKIIGR-THHKNLVR 551
           +LVG G+ G+VY+G   +K  Q+  I V  +  D E   EE   E+ ++ + +HH+N+  
Sbjct: 30  ELVGNGTYGQVYKG-RHVKTGQLAAIKVMDVTGDEE---EEIKQEINMLKKYSHHRNIAT 85
Query: 552 LLG-FCSE-----EDKRLLVYELMPNGTLSNFLFH-EGQ--RPGWVQRVEIALGVARGLL 602
             G F  +     +D+  LV E    G++++ + + +G   +  W+    I   + RGL 
Sbjct: 86  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AYICREILRGLS 143
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           +LH+    ++IH DIK QNVL     L  N   K+ DFG+S  L++   R +T + GT  
Sbjct: 144 HLHQH---KVIHRDIKGQNVL-----LTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPY 194
Query: 663 YVAPEWLR-----NVPVTTKVDVFSFGVMLLEIICG 693
           ++APE +      +     K D++S G+  +E+  G
Sbjct: 195 WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 108/235 (45%), Gaps = 49/235 (20%)
Query: 494 KLVGTGSSGKV-YRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVR 551
           K++G GSSG V ++G  + +     +AVK++  D        + E+K++  +  H N++R
Sbjct: 21  KILGYGSSGTVVFQGSFQGR----PVAVKRMLIDFCDIA---LMEIKLLTESDDHPNVIR 73
Query: 552 LLGFCSEEDKRLLVYEL------------MPNGTLSNFLFHEGQRPGWVQRVEIALGVAR 599
              +CSE   R L   L              N +  N    +   P  + R +IA GVA 
Sbjct: 74  Y--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR-QIASGVA- 129
Query: 600 GLLYLHEECETQIIHCDIKPQNVLL--------DLKTLDTNYMAKISDFGISKLLNKDQT 651
              +LH     +IIH D+KPQN+L+        D +T   N    ISDFG+ K L+  Q+
Sbjct: 130 ---HLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS 183
Query: 652 RTDTNMR---GTMGYVAPEWLRNV-------PVTTKVDVFSFGVMLLEIICGRRH 696
              TN+    GT G+ APE L           +T  +D+FS G +   I+   +H
Sbjct: 184 SFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 72  IHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 127
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KP+N+L     ++T    K++DFG+++       RT  +   T+ Y APE L     
Sbjct: 128 RDLKPENLL-----INTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRR 202

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+   V R +  L   +    +   +K   + +++   E +I     H N+VRL   
Sbjct: 19  LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 556 CSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
            SEE    L+++L+  G L     +   + E      +Q++         +L+ H+    
Sbjct: 79  ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQI------LEAVLHCHQ---M 129
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
            ++H ++KP+N+LL  K        K++DFG++  +  +Q +      GT GY++PE LR
Sbjct: 130 GVVHRNLKPENLLLASKL--KGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLR 186
Query: 671 NVPVTTKVDVFSFGVMLLEIICG 693
             P    VD+++ GV+L  ++ G
Sbjct: 187 KDPYGKPVDLWACGVILYILLVG 209

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGI-LRLKDTQIEIAVKKLEK-DIEKTNEEFMTELKII 541
           E+Q       + +G G  G V++GI +  ++  + +A+K  +    +   E+F+ E   +
Sbjct: 6   EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +  H ++V+L+G  +E +   ++ EL   G L +FL            +  A  ++  L
Sbjct: 66  RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 124
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL  +   + +H DI  +NVL+      +N   K+ DFG+S+ +        +  +  +
Sbjct: 125 AYLESK---RFVHRDIAARNVLVS-----SNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            ++APE +     T+  DV+ FGV + EI+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEIL 206

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGI-LRLKDTQIEIAVKKLEK-DIEKTNEEFMTELKII 541
           E+Q       + +G G  G V++GI +  ++  + +A+K  +    +   E+F+ E   +
Sbjct: 6   EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +  H ++V+L+G  +E +   ++ EL   G L +FL            +  A  ++  L
Sbjct: 66  RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 124
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL  +   + +H DI  +NVL+      +N   K+ DFG+S+ +        +  +  +
Sbjct: 125 AYLESK---RFVHRDIAARNVLVS-----SNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            ++APE +     T+  DV+ FGV + EI+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEIL 206

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGI-LRLKDTQIEIAVKKLEK-DIEKTNEEFMTELKII 541
           E+Q       + +G G  G V++GI +  ++  + +A+K  +    +   E+F+ E   +
Sbjct: 8   EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 67
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +  H ++V+L+G  +E +   ++ EL   G L +FL            +  A  ++  L
Sbjct: 68  RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 126
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL  +   + +H DI  +NVL+      +N   K+ DFG+S+ +        +  +  +
Sbjct: 127 AYLESK---RFVHRDIAARNVLVS-----SNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 178
Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            ++APE +     T+  DV+ FGV + EI+
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEIL 208

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGI-LRLKDTQIEIAVKKLEK-DIEKTNEEFMTELKII 541
           E+Q       + +G G  G V++GI +  ++  + +A+K  +    +   E+F+ E   +
Sbjct: 9   EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 68
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +  H ++V+L+G  +E +   ++ EL   G L +FL            +  A  ++  L
Sbjct: 69  RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 127
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL  +   + +H DI  +NVL+      +N   K+ DFG+S+ +        +  +  +
Sbjct: 128 AYLESK---RFVHRDIAARNVLVS-----SNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 179
Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            ++APE +     T+  DV+ FGV + EI+
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEIL 209

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGI-LRLKDTQIEIAVKKLEK-DIEKTNEEFMTELKII 541
           E+Q       + +G G  G V++GI +  ++  + +A+K  +    +   E+F+ E   +
Sbjct: 3   EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +  H ++V+L+G  +E +   ++ EL   G L +FL            +  A  ++  L
Sbjct: 63  RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 121
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL  +   + +H DI  +NVL+      +N   K+ DFG+S+ +        +  +  +
Sbjct: 122 AYLESK---RFVHRDIAARNVLVS-----SNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 173
Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            ++APE +     T+  DV+ FGV + EI+
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEIL 203

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 28/216 (12%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE------FMTELKIIGRTH 545
            SK +G+G+ G+V     R    ++ I +    K    +  E        TE++I+ + +
Sbjct: 13  MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 72
Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARG 600
           H  ++++  F   ED   +V ELM  G L      N    E     +  ++ +A+     
Sbjct: 73  HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ---- 127
Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
             YLHE     IIH D+KP+NVLL  +  D   + KI+DFG SK+L   +T     + GT
Sbjct: 128 --YLHE---NGIIHRDLKPENVLLSSQEEDC--LIKITDFGHSKILG--ETSLMRTLCGT 178
Query: 661 MGYVAPEWLRNVPVT---TKVDVFSFGVMLLEIICG 693
             Y+APE L +V        VD +S GV+L   + G
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 28/216 (12%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE------FMTELKIIGRTH 545
            SK +G+G+ G+V     R    ++ I +    K    +  E        TE++I+ + +
Sbjct: 20  MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 79
Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARG 600
           H  ++++  F   ED   +V ELM  G L      N    E     +  ++ +A+     
Sbjct: 80  HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ---- 134
Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
             YLHE     IIH D+KP+NVLL  +  D   + KI+DFG SK+L   +T     + GT
Sbjct: 135 --YLHE---NGIIHRDLKPENVLLSSQEEDC--LIKITDFGHSKILG--ETSLMRTLCGT 185
Query: 661 MGYVAPEWLRNVPVT---TKVDVFSFGVMLLEIICG 693
             Y+APE L +V        VD +S GV+L   + G
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 28/216 (12%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE------FMTELKIIGRTH 545
            SK +G+G+ G+V     R    ++ I +    K    +  E        TE++I+ + +
Sbjct: 14  MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARG 600
           H  ++++  F   ED   +V ELM  G L      N    E     +  ++ +A+     
Sbjct: 74  HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ---- 128
Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
             YLHE     IIH D+KP+NVLL  +  D   + KI+DFG SK+L   +T     + GT
Sbjct: 129 --YLHE---NGIIHRDLKPENVLLSSQEEDC--LIKITDFGHSKILG--ETSLMRTLCGT 179
Query: 661 MGYVAPEWLRNVPVT---TKVDVFSFGVMLLEIICG 693
             Y+APE L +V        VD +S GV+L   + G
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           + KL+G G+ GKV   ++R K T    A+K L K++    +E    +TE +++  T H  
Sbjct: 9   YLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG--VARGLLYLHE 606
           L  L       D+   V E    G L    FH  +   + +      G  +   L YLH 
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
                +++ DIK +N++LD      +   KI+DFG+ K    D     T   GT  Y+AP
Sbjct: 124 R---DVVYRDIKLENLMLD-----KDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAP 174
Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           E L +      VD +  GV++ E++CGR
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 28/216 (12%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE------FMTELKIIGRTH 545
            SK +G+G+ G+V     R    ++ I +    K    +  E        TE++I+ + +
Sbjct: 14  MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARG 600
           H  ++++  F   ED   +V ELM  G L      N    E     +  ++ +A+     
Sbjct: 74  HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ---- 128
Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
             YLHE     IIH D+KP+NVLL  +  D   + KI+DFG SK+L   +T     + GT
Sbjct: 129 --YLHE---NGIIHRDLKPENVLLSSQEEDC--LIKITDFGHSKILG--ETSLMRTLCGT 179
Query: 661 MGYVAPEWLRNVPVT---TKVDVFSFGVMLLEIICG 693
             Y+APE L +V        VD +S GV+L   + G
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 31/222 (13%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKI-IGRTH 545
             K +G G+ G+V      GI +    +  +AVK L E      +   M+ELKI I   H
Sbjct: 32  LGKPLGRGAFGQVIEADAFGIDKTATCRT-VAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 546 HKNLVRLLGFCSEEDKRLLV-YELMPNGTLSNFL------FHEGQRPGWVQR-------- 590
           H N+V LLG C++    L+V  E    G LS +L      F   + P  + +        
Sbjct: 91  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
           +  +  VA+G+ +L      + IH D+  +N+LL  K +      KI DFG+++ + KD 
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV-----VKICDFGLARDIXKDP 202
Query: 651 TRTDT-NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
                 + R  + ++APE + +   T + DV+SFGV+L EI 
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGI-LRLKDTQIEIAVKKLEK-DIEKTNEEFMTELKII 541
           E+Q       + +G G  G V++GI +  ++  + +A+K  +    +   E+F+ E   +
Sbjct: 6   EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +  H ++V+L+G  +E +   ++ EL   G L +FL            +  A  ++  L
Sbjct: 66  RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 124
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL  +   + +H DI  +NVL+      +N   K+ DFG+S+ +        +  +  +
Sbjct: 125 AYLESK---RFVHRDIAARNVLVS-----SNDCVKLGDFGLSRYMEDSTXXKASKGKLPI 176
Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            ++APE +     T+  DV+ FGV + EI+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEIL 206

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           + KL+G G+ GKV   ++R K T    A+K L K++    +E    +TE +++  T H  
Sbjct: 12  YLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 69
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG--VARGLLYLHE 606
           L  L       D+   V E    G L    FH  +   + +      G  +   L YLH 
Sbjct: 70  LTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLHS 126
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
                +++ DIK +N++LD      +   KI+DFG+ K    D     T   GT  Y+AP
Sbjct: 127 R---DVVYRDIKLENLMLD-----KDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAP 177
Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           E L +      VD +  GV++ E++CGR
Sbjct: 178 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 205

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 28/216 (12%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE------FMTELKIIGRTH 545
            SK +G+G+ G+V     R    ++ I +    K    +  E        TE++I+ + +
Sbjct: 14  MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARG 600
           H  ++++  F   ED   +V ELM  G L      N    E     +  ++ +A+     
Sbjct: 74  HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ---- 128
Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
             YLHE     IIH D+KP+NVLL  +  D   + KI+DFG SK+L   +T     + GT
Sbjct: 129 --YLHE---NGIIHRDLKPENVLLSSQEEDC--LIKITDFGHSKILG--ETSLMRTLCGT 179
Query: 661 MGYVAPEWLRNVPVT---TKVDVFSFGVMLLEIICG 693
             Y+APE L +V        VD +S GV+L   + G
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 36/225 (16%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKI-IGRTH 545
             K +G G+ G+V      GI +    +  +AVK L E      +   M+ELKI I   H
Sbjct: 33  LGKPLGRGAFGQVIEADAFGIDKTATCRT-VAVKMLKEGATHSEHRALMSELKILIHIGH 91
Query: 546 HKNLVRLLGFCSEEDKRLLV-YELMPNGTLSNFLFHEGQRPGWVQRVEI----------- 593
           H N+V LLG C++    L+V  E    G LS +L    +R  +V   E            
Sbjct: 92  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKEAPEDLYKDFLTL 149
Query: 594 ------ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
                 +  VA+G+ +L      + IH D+  +N+LL  K +      KI DFG+++ + 
Sbjct: 150 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV-----VKICDFGLARDIY 201
Query: 648 KDQTRTDT-NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           KD       + R  + ++APE + +   T + DV+SFGV+L EI 
Sbjct: 202 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 246

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 74  IHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 129
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KP+N+L     ++T    K++DFG+++       RT  +   T+ Y APE L     
Sbjct: 130 RDLKPENLL-----INTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRR 204

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           + KL+G G+ GKV   ++R K T    A+K L K++    +E    +TE +++  T H  
Sbjct: 9   YLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG--VARGLLYLHE 606
           L  L       D+   V E    G L    FH  +   + +      G  +   L YLH 
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
                +++ DIK +N++LD      +   KI+DFG+ K    D     T   GT  Y+AP
Sbjct: 124 R---DVVYRDIKLENLMLD-----KDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAP 174
Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           E L +      VD +  GV++ E++CGR
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G VY+   +L    + +   +L+ + E      + E+ ++   +H N+V+LL  
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIH 614
              E+K  LV+E + +  L  F+         +  ++  L  + +GL + H     +++H
Sbjct: 72  IHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLH 127
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP- 673
            D+KP+N+L     ++T    K++DFG+++       RT  +   T+ Y APE L     
Sbjct: 128 RDLKPENLL-----INTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
            +T VD++S G +  E++  R
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRR 202

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 20/207 (9%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGR-THHKNL 549
           +++G GS  KV   ++RLK T    A++ ++K++   +E+     TE  +  + ++H  L
Sbjct: 58  RVIGRGSYAKVL--LVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 115
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V L      E +   V E +  G L   +  + + P    R   A  ++  L YLHE   
Sbjct: 116 VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHERG- 173
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK--LLNKDQTRTDTNMRGTMGYVAPE 667
             II+ D+K  NVLLD     +    K++D+G+ K  L   D T T     GT  Y+APE
Sbjct: 174 --IIYRDLKLDNVLLD-----SEGHIKLTDYGMCKEGLRPGDTTST---FCGTPNYIAPE 223
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            LR       VD ++ GV++ E++ GR
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGR 250

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 100/200 (50%), Gaps = 14/200 (7%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-NEEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V +  ++ + + + +A K +  +I+     + + EL+++   +   +V   G
Sbjct: 24  LGAGNGGVVTK--VQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 81
Query: 555 FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIH 614
               + +  +  E M  G+L   L    + P  +   ++++ V RGL YL E+   QI+H
Sbjct: 82  AFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-KVSIAVLRGLAYLREK--HQIMH 138
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+KP N+L     +++    K+ DFG+S  L         +  GT  Y+APE L+    
Sbjct: 139 RDVKPSNIL-----VNSRGEIKLCDFGVSGQLIDSMA---NSFVGTRSYMAPERLQGTHY 190
Query: 675 TTKVDVFSFGVMLLEIICGR 694
           + + D++S G+ L+E+  GR
Sbjct: 191 SVQSDIWSMGLSLVELAVGR 210

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 44/222 (19%)
Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR--TH------- 545
           ++G G S  V R + R   T  E AVK +E   E+ + E + E++   R  TH       
Sbjct: 101 VIGRGVSSVVRRCVHRA--TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAG 158
Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL--- 602
           H +++ L+          LV++LM  G L ++L          ++V ++    R ++   
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL---------TEKVALSEKETRSIMRSL 209
Query: 603 -----YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
                +LH      I+H D+KP+N+L     LD N   ++SDFG S  L   +   +  +
Sbjct: 210 LEAVSFLHA---NNIVHRDLKPENIL-----LDDNMQIRLSDFGFSCHLEPGEKLRE--L 259
Query: 658 RGTMGYVAPEWLRNVPVTT------KVDVFSFGVMLLEIICG 693
            GT GY+APE L+     T      +VD+++ GV+L  ++ G
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +     N E    L+I+ +  
Sbjct: 18  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLD 71
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 72  HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 131 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 181
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 18/208 (8%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           + KL+G G+ GKV   +++ K T    A+K L+K++    +E    +TE +++  + H  
Sbjct: 12  YLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 69
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG--VARGLLYLHE 606
           L  L       D+   V E    G L    FH  +   + +      G  +   L YLH 
Sbjct: 70  LTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYLH- 125
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
             E  +++ D+K +N++LD      +   KI+DFG+ K   KD   T     GT  Y+AP
Sbjct: 126 -SEKNVVYRDLKLENLMLD-----KDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAP 178
Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           E L +      VD +  GV++ E++CGR
Sbjct: 179 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 206

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 18/208 (8%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           + KL+G G+ GKV   +++ K T    A+K L+K++    +E    +TE +++  + H  
Sbjct: 152 YLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 209
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG--VARGLLYLHE 606
           L  L       D+   V E    G L    FH  +   + +      G  +   L YLH 
Sbjct: 210 LTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYLH- 265
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
             E  +++ D+K +N++LD      +   KI+DFG+ K   KD     T   GT  Y+AP
Sbjct: 266 -SEKNVVYRDLKLENLMLD-----KDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAP 318
Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           E L +      VD +  GV++ E++CGR
Sbjct: 319 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 346

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 18/208 (8%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           + KL+G G+ GKV   +++ K T    A+K L+K++    +E    +TE +++  + H  
Sbjct: 14  YLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 71
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG--VARGLLYLHE 606
           L  L       D+   V E    G L    FH  +   + +      G  +   L YLH 
Sbjct: 72  LTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYLH- 127
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
             E  +++ D+K +N++LD      +   KI+DFG+ K   KD   T     GT  Y+AP
Sbjct: 128 -SEKNVVYRDLKLENLMLD-----KDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAP 180
Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           E L +      VD +  GV++ E++CGR
Sbjct: 181 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 208

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 18/208 (8%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           + KL+G G+ GKV   +++ K T    A+K L+K++    +E    +TE +++  + H  
Sbjct: 13  YLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 70
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG--VARGLLYLHE 606
           L  L       D+   V E    G L    FH  +   + +      G  +   L YLH 
Sbjct: 71  LTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYLH- 126
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
             E  +++ D+K +N++LD      +   KI+DFG+ K   KD   T     GT  Y+AP
Sbjct: 127 -SEKNVVYRDLKLENLMLD-----KDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAP 179
Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           E L +      VD +  GV++ E++CGR
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 207

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           + KL+G G+ GKV   ++R K T    A+K L K++    +E    +TE +++  T H  
Sbjct: 9   YLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG--VARGLLYLHE 606
           L  L       D+   V E    G L    FH  +   + +      G  +   L YLH 
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
                +++ DIK +N++LD      +   KI+DFG+ K    D   T     GT  Y+AP
Sbjct: 124 R---DVVYRDIKLENLMLD-----KDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAP 174
Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           E L +      VD +  GV++ E++CGR
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           + KL+G G+ GKV   ++R K T    A+K L K++    +E    +TE +++  T H  
Sbjct: 9   YLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG--VARGLLYLHE 606
           L  L       D+   V E    G L    FH  +   + +      G  +   L YLH 
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
                +++ DIK +N++LD      +   KI+DFG+ K    D   T     GT  Y+AP
Sbjct: 124 R---DVVYRDIKLENLMLD-----KDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAP 174
Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           E L +      VD +  GV++ E++CGR
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           F  ++G GS GKV   +   K T+   A+K L+KD+   +++    M E +++       
Sbjct: 23  FLMVLGKGSFGKVM--LADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 549 LVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGW--VQRVEIALGVARGLLYLH 605
            +  L  C +   RL  V E +  G L   ++H  Q   +   Q V  A  ++ GL +LH
Sbjct: 81  FLTQLHSCFQTVDRLYFVMEYVNGGDL---MYHIQQVGKFKEPQAVFYAAEISIGLFFLH 137
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
           +     II+ D+K  NV+LD     +    KI+DFG+ K    D   T     GT  Y+A
Sbjct: 138 KRG---IIYRDLKLDNVMLD-----SEGHIKIADFGMCKEHMMDGVTT-REFCGTPDYIA 188
Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           PE +   P    VD +++GV+L E++ G+
Sbjct: 189 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 18/208 (8%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           + KL+G G+ GKV   +++ K T    A+K L+K++    +E    +TE +++  + H  
Sbjct: 155 YLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 212
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG--VARGLLYLHE 606
           L  L       D+   V E    G L    FH  +   + +      G  +   L YLH 
Sbjct: 213 LTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVSALDYLH- 268
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
             E  +++ D+K +N++LD      +   KI+DFG+ K   KD     T   GT  Y+AP
Sbjct: 269 -SEKNVVYRDLKLENLMLD-----KDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAP 321
Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           E L +      VD +  GV++ E++CGR
Sbjct: 322 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 349

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 8/213 (3%)
Query: 485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK---TNEEFMTELKII 541
           L E      +++G G+   V R I R    Q  + +  + K       + E+   E  I 
Sbjct: 21  LFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
               H ++V LL   S +    +V+E M    L  F   +    G+V    +A    R +
Sbjct: 81  HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLC-FEIVKRADAGFVYSEAVASHYMRQI 139
Query: 602 LYLHEEC-ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
           L     C +  IIH D+KP+NVLL  K  + +   K+ DFG++  L +        + GT
Sbjct: 140 LEALRYCHDNNIIHRDVKPENVLLASK--ENSAPVKLGDFGVAIQLGESGLVAGGRV-GT 196
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
             ++APE ++  P    VDV+  GV+L  ++ G
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 494 KLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEK----DIEKTNEEFMTELKIIGRTHH 546
           K++GTG+ GKV+  ++R     DT    A+K L+K       KT E   TE +++     
Sbjct: 60  KVLGTGAYGKVF--LVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ 117
Query: 547 KNLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
              +  L +  + + +L L+ + +  G L     H  QR  + +  E+ + V   +L L 
Sbjct: 118 SPFLVTLHYAFQTETKLHLILDYINGGEL---FTHLSQRERFTEH-EVQIYVGEIVLALE 173
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
              +  II+ DIK +N+LLD     +N    ++DFG+SK    D+T    +  GT+ Y+A
Sbjct: 174 HLHKLGIIYRDIKLENILLD-----SNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMA 228
Query: 666 PEWLR--NVPVTTKVDVFSFGVMLLEIICG 693
           P+ +R  +      VD +S GV++ E++ G
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 36/225 (16%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKI-IGRTH 545
             K +G G+ G+V      GI +    +  +AVK L E      +   M+ELKI I   H
Sbjct: 22  LGKPLGRGAFGQVIEADAFGIDKTATCRT-VAVKMLKEGATHSEHRALMSELKILIHIGH 80
Query: 546 HKNLVRLLGFCSEEDKRLLVY-ELMPNGTLSNFLFHEGQRPGWV---------------- 588
           H N+V LLG C++    L+V  E    G LS +L    +R  +V                
Sbjct: 81  HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 589 -QRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
              +  +  VA+G+ +L      + IH D+  +N+LL  K +      KI DFG+++ + 
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV-----VKICDFGLARDIX 190
Query: 648 KDQTRTDT-NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           KD       + R  + ++APE + +   T + DV+SFGV+L EI 
Sbjct: 191 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 235

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 22/209 (10%)
Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLE-KDIEKTNEEFMTELKIIGRTHHKN 548
           F+KL  +G GS G+V++GI     TQ  +A+K ++ ++ E   E+   E+ ++ +     
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDN--RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLH 605
           + +  G   ++ K  ++ E +  G+  + L      PG +   +IA     + +GL YLH
Sbjct: 82  VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLH 136
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
            E +   IH DIK  NVLL       +   K++DFG++  L   Q + +  + GT  ++A
Sbjct: 137 SEKK---IHRDIKAANVLLS-----EHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMA 187
Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           PE ++     +K D++S G+  +E+  G 
Sbjct: 188 PEVIKQSAYDSKADIWSLGITAIELARGE 216

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 36/225 (16%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKI-IGRTH 545
             K +G G+ G+V      GI +    +  +AVK L E      +   M+ELKI I   H
Sbjct: 31  LGKPLGRGAFGQVIEADAFGIDKTATCRT-VAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 546 HKNLVRLLGFCSEEDKRLLV-YELMPNGTLSNFLFHEGQRPGWV---------------- 588
           H N+V LLG C++    L+V  E    G LS +L    +R  +V                
Sbjct: 90  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 589 -QRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
              +  +  VA+G+ +L      + IH D+  +N+LL  K +      KI DFG+++ + 
Sbjct: 148 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV-----VKICDFGLARDIX 199
Query: 648 KDQTRTDT-NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           KD       + R  + ++APE + +   T + DV+SFGV+L EI 
Sbjct: 200 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 26/209 (12%)
Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTN--EEFMTELKIIGRTHHKNLVR 551
           L+G GS   VYR       T +E+A+K ++K  + K    +    E+KI  +  H +++ 
Sbjct: 18  LLGKGSFAGVYRA--ESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILE 75
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFL------FHEGQRPGWVQRVEIALGVARGLLYLH 605
           L  +  + +   LV E+  NG ++ +L      F E +   ++ ++        G+LYLH
Sbjct: 76  LYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQI------ITGMLYLH 129
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                 I+H D+   N+LL       N   KI+DFG++  L     +  T + GT  Y++
Sbjct: 130 SH---GILHRDLTLSNLLLT-----RNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYIS 180
Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           PE         + DV+S G M   ++ GR
Sbjct: 181 PEIATRSAHGLESDVWSLGCMFYTLLIGR 209

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 103/215 (47%), Gaps = 33/215 (15%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +L+G+G  G+V++   R+      I      K ++  NE+   E+K + +  H N+V   
Sbjct: 17  ELIGSGGFGQVFKAKHRIDGKTYVI------KRVKYNNEKAEREVKALAKLDHVNIVHYN 70
Query: 554 G----------FCSEEDKR------LLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALG 596
           G            S+   R       +  E    GTL  ++    G++   V  +E+   
Sbjct: 71  GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 130
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + +G+ Y+H +   ++I+ D+KP N+ L    +DT    KI DFG+   L  D  R  + 
Sbjct: 131 ITKGVDYIHSK---KLINRDLKPSNIFL----VDTK-QVKIGDFGLVTSLKNDGKRXRS- 181
Query: 657 MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            +GT+ Y++PE + +     +VD+++ G++L E++
Sbjct: 182 -KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 36/225 (16%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKI-IGRTH 545
             K +G G+ G+V      GI +    +  +AVK L E      +   M+ELKI I   H
Sbjct: 22  LGKPLGRGAFGQVIEADAFGIDKTATCRT-VAVKMLKEGATHSEHRALMSELKILIHIGH 80
Query: 546 HKNLVRLLGFCSEEDKRLLV-YELMPNGTLSNFLFHEGQRPGWV---------------- 588
           H N+V LLG C++    L+V  E    G LS +L    +R  +V                
Sbjct: 81  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 589 -QRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
              +  +  VA+G+ +L      + IH D+  +N+LL  K +      KI DFG+++ + 
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV-----VKICDFGLARDIX 190
Query: 648 KDQTRTDT-NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           KD       + R  + ++APE + +   T + DV+SFGV+L EI 
Sbjct: 191 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 235

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 20/207 (9%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGR-THHKNL 549
           +++G GS  KV   ++RLK T    A+K ++K++   +E+     TE  +  + ++H  L
Sbjct: 26  RVIGRGSYAKVL--LVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 83
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V L      E +   V E +  G L   +  + + P    R   A  ++  L YLHE   
Sbjct: 84  VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHERG- 141
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK--LLNKDQTRTDTNMRGTMGYVAPE 667
             II+ D+K  NVLLD     +    K++D+G+ K  L   D T   +   GT  Y+APE
Sbjct: 142 --IIYRDLKLDNVLLD-----SEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 191
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            LR       VD ++ GV++ E++ GR
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGR 218

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 20/207 (9%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGR-THHKNL 549
           +++G GS  KV   ++RLK T    A+K ++K++   +E+     TE  +  + ++H  L
Sbjct: 15  RVIGRGSYAKVL--LVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 72
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V L      E +   V E +  G L   +  + + P    R   A  ++  L YLHE   
Sbjct: 73  VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHERG- 130
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK--LLNKDQTRTDTNMRGTMGYVAPE 667
             II+ D+K  NVLLD     +    K++D+G+ K  L   D T   +   GT  Y+APE
Sbjct: 131 --IIYRDLKLDNVLLD-----SEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 180
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            LR       VD ++ GV++ E++ GR
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGR 207

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 24/212 (11%)
Query: 495 LVGTGSSGK-VYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRL 552
           ++G G+ G  VYRG+   +D    +AVK++  +     +    E++++  +  H N++R 
Sbjct: 31  VLGHGAEGTIVYRGMFDNRD----VAVKRILPECFSFADR---EVQLLRESDEHPNVIRY 83
Query: 553 LGFCSEEDKRL--LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
             FC+E+D++   +  EL    TL  ++  +      ++ + +      GL +LH     
Sbjct: 84  --FCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS---L 137
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPEW 668
            I+H D+KP N+L+ +        A ISDFG+ K L   +      + + GT G++APE 
Sbjct: 138 NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEM 197
Query: 669 L----RNVPVTTKVDVFSFGVMLLEIICGRRH 696
           L    +  P  T VD+FS G +   +I    H
Sbjct: 198 LSEDCKENPTYT-VDIFSAGCVFYYVISEGSH 228

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 20/207 (9%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGR-THHKNL 549
           +++G GS  KV   ++RLK T    A+K ++K++   +E+     TE  +  + ++H  L
Sbjct: 11  RVIGRGSYAKVL--LVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL 68
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V L      E +   V E +  G L   +  + + P    R   A  ++  L YLHE   
Sbjct: 69  VGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHERG- 126
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK--LLNKDQTRTDTNMRGTMGYVAPE 667
             II+ D+K  NVLLD     +    K++D+G+ K  L   D T   +   GT  Y+APE
Sbjct: 127 --IIYRDLKLDNVLLD-----SEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 176
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            LR       VD ++ GV++ E++ GR
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGR 203

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 7/165 (4%)
Query: 529 KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWV 588
           + +++   E +I     H N+VRL    SEE    LV++L+  G L    F +     + 
Sbjct: 45  RDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYY 100
Query: 589 QRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK 648
              + +  + + L  ++      I+H D+KP+N+LL  K+       K++DFG++  +  
Sbjct: 101 SEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKS--KGAAVKLADFGLAIEVQG 158
Query: 649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           DQ +      GT GY++PE LR  P    VD+++ GV+L  ++ G
Sbjct: 159 DQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 36/225 (16%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKI-IGRTH 545
             K +G G+ G+V      GI +    +  +AVK L E      +   M+ELKI I   H
Sbjct: 31  LGKPLGRGAFGQVIEADAFGIDKTATCRT-VAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 546 HKNLVRLLGFCSEEDKRLLV-YELMPNGTLSNFLFHEGQRPGWV---------------- 588
           H N+V LLG C++    L+V  E    G LS +L    +R  +V                
Sbjct: 90  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 589 -QRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
              +  +  VA+G+ +L      + IH D+  +N+LL  K +      KI DFG+++ + 
Sbjct: 148 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV-----VKICDFGLARDIY 199
Query: 648 KDQTRTDT-NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           KD       + R  + ++APE + +   T + DV+SFGV+L EI 
Sbjct: 200 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           + KL+G G+ GKV   ++R K T    A+K L K++    +E    +TE +++  T H  
Sbjct: 14  YLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 71
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG--VARGLLYLHE 606
           L  L       D+   V E    G L    FH  +   + +      G  +   L YLH 
Sbjct: 72  LTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLHS 128
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
                +++ DIK +N++LD      +   KI+DFG+ K    D   T     GT  Y+AP
Sbjct: 129 R---DVVYRDIKLENLMLD-----KDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAP 179
Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           E L +      VD +  GV++ E++CGR
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 207

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +     N E    L+I+ +  
Sbjct: 18  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLD 71
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 72  HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 131 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 181
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 26/219 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH 545
           QE +   +K++G GS G VY+   +L D+   +A+KK+ +     N E    L+I+ +  
Sbjct: 18  QEVSYTDTKVIGNGSFGVVYQA--KLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLD 71
Query: 546 HKNLVRL-LGFCSEEDKRLLVY-----ELMPNGTLSNFLFHEGQRPGWVQRVEIAL---G 596
           H N+VRL   F S  +K+  VY     + +P  T+     H  +    +  + + L    
Sbjct: 72  HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           + R L Y+H      I H DIKPQN+LLD  T     + K+ DFG +K L + +   + +
Sbjct: 131 LFRSLAYIHS---FGICHRDIKPQNLLLDPDTA----VLKLCDFGSAKQLVRGE--PNVS 181
Query: 657 MRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
              +  Y APE +      T+ +DV+S G +L E++ G+
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 25/209 (11%)
Query: 494 KLVGTGSSGKVY--RGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELK--IIGRTHHKNL 549
           K++G GS GKV+  R + R  D+    A+K L+K   K  +   T+++  I+   +H  +
Sbjct: 34  KVLGQGSFGKVFLVRKVTR-PDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFV 92
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARGLLYL 604
           V+L      E K  L+ + +  G L        +F E     ++   E+ALG    L +L
Sbjct: 93  VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL--AELALG----LDHL 146
Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
           H      II+ D+KP+N+LLD          K++DFG+SK    D  +   +  GT+ Y+
Sbjct: 147 HS---LGIIYRDLKPENILLD-----EEGHIKLTDFGLSKE-AIDHEKKAYSFCGTVEYM 197
Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           APE +     +   D +S+GV++ E++ G
Sbjct: 198 APEVVNRQGHSHSADWWSYGVLMFEMLTG 226

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 90/203 (44%), Gaps = 21/203 (10%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           VG GS G+V+R  ++ K T  + AVKK+  ++ +  E     L          +V L G 
Sbjct: 66  VGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFRVEE-----LVACAGLSSPRIVPLYGA 118
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVA-RGLLYLHEECETQIIH 614
             E     +  EL+  G+L   +   G  P    R    LG A  GL YLH     +I+H
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIKQMGCLP--EDRALYYLGQALEGLEYLHTR---RILH 173
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD----QTRTDTNMRGTMGYVAPEWLR 670
            D+K  NVLL          A + DFG +  L  D       T   + GT  ++APE + 
Sbjct: 174 GDVKADNVLLS----SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 229
Query: 671 NVPVTTKVDVFSFGVMLLEIICG 693
             P   KVD++S   M+L ++ G
Sbjct: 230 GKPCDAKVDIWSSCCMMLHMLNG 252

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 114/225 (50%), Gaps = 18/225 (8%)
Query: 471 NSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRG--ILRLKDTQIEIAVKKLEKDIE 528
            +M++  R F   EL++      K++G+G  G V++G  I   +  +I + +K +E    
Sbjct: 1   GAMKVLARIFKETELRKL-----KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG 55
Query: 529 KTNEEFMTE-LKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGW 587
           + + + +T+ +  IG   H ++VRLLG C     + LV + +P G+L + +       G 
Sbjct: 56  RQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGP 114
Query: 588 VQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
              +   + +A+G+ YL E     ++H ++  +NVL     L +    +++DFG++ LL 
Sbjct: 115 QLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVL-----LKSPSQVQVADFGVADLLP 166
Query: 648 KDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            D  +   +  +  + ++A E +     T + DV+S+GV + E++
Sbjct: 167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELM 211

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           + KL+G G+ GKV   ++R K T    A+K L K++    +E    +TE +++  T H  
Sbjct: 9   YLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG--VARGLLYLHE 606
           L  L       D+   V E    G L    FH  +   + +      G  +   L YLH 
Sbjct: 67  LTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
                +++ DIK +N++LD      +   KI+DFG+ K    D   T     GT  Y+AP
Sbjct: 124 R---DVVYRDIKLENLMLD-----KDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAP 174
Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           E L +      VD +  GV++ E++CGR
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 36/225 (16%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKI-IGRTH 545
             K +G G+ G+V      GI +    +  +AVK L E      +   M+ELKI I   H
Sbjct: 22  LGKPLGRGAFGQVIEADAFGIDKTATCRT-VAVKMLKEGATHSEHRALMSELKILIHIGH 80
Query: 546 HKNLVRLLGFCSEEDKRLLVY-ELMPNGTLSNFLFHEGQRPGWV---------------- 588
           H N+V LLG C++    L+V  E    G LS +L    +R  +V                
Sbjct: 81  HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 589 -QRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
              +  +  VA+G+ +L      + IH D+  +N+LL  K +      KI DFG+++ + 
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV-----VKICDFGLARDIY 190
Query: 648 KDQTRTDT-NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           KD       + R  + ++APE + +   T + DV+SFGV+L EI 
Sbjct: 191 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 235

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 33/210 (15%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT----------H 545
           +G G+ GKV  G  +L  T  ++AVK L       N + +  L ++G+            
Sbjct: 19  LGVGTFGKVKIGEHQL--TGHKVAVKIL-------NRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
           H ++++L    S      +V E +  G L +++   G+    V+ +E A  + + +L   
Sbjct: 70  HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR----VEEME-ARRLFQQILSAV 124
Query: 606 EECETQ-IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
           + C    ++H D+KP+NVL     LD +  AKI+DFG+S +++  +   D+   G+  Y 
Sbjct: 125 DYCHRHMVVHRDLKPENVL-----LDAHMNAKIADFGLSNMMSDGEFLRDSC--GSPNYA 177
Query: 665 APEWLR-NVPVTTKVDVFSFGVMLLEIICG 693
           APE +   +    +VD++S GV+L  ++CG
Sbjct: 178 APEVISGRLYAGPEVDIWSCGVILYALLCG 207

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 46/228 (20%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +L+G+G  G+V++   R+      I      + ++  NE+   E+K + +  H N+V   
Sbjct: 18  ELIGSGGFGQVFKAKHRIDGKTYVI------RRVKYNNEKAEREVKALAKLDHVNIVHYN 71
Query: 554 G--------------------FCSEEDKR---------LLVYELMPNGTLSNFL-FHEGQ 583
           G                    +  E  K           +  E    GTL  ++    G+
Sbjct: 72  GCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 131
Query: 584 RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS 643
           +   V  +E+   + +G+ Y+H +   ++IH D+KP N+ L    +DT    KI DFG+ 
Sbjct: 132 KLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFL----VDTK-QVKIGDFGLV 183
Query: 644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
             L  D  RT +  +GT+ Y++PE + +     +VD+++ G++L E++
Sbjct: 184 TSLKNDGKRTRS--KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 36/225 (16%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKI-IGRTH 545
             K +G G+ G+V      GI +    +  +AVK L E      +   M+ELKI I   H
Sbjct: 31  LGKPLGRGAFGQVIEADAFGIDKTATCRT-VAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 546 HKNLVRLLGFCSEEDKRLLV-YELMPNGTLSNFLFHEGQRPGWV---------------- 588
           H N+V LLG C++    L+V  E    G LS +L    +R  +V                
Sbjct: 90  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 589 -QRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
              +  +  VA+G+ +L      + IH D+  +N+LL  K +      KI DFG+++ + 
Sbjct: 148 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV-----VKICDFGLARDIY 199
Query: 648 KDQTRTDT-NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           KD       + R  + ++APE + +   T + DV+SFGV+L EI 
Sbjct: 200 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 36/225 (16%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKI-IGRTH 545
             K +G G+ G+V      GI +    +  +AVK L E      +   M+ELKI I   H
Sbjct: 22  LGKPLGRGAFGQVIEADAFGIDKTATCRT-VAVKMLKEGATHSEHRALMSELKILIHIGH 80
Query: 546 HKNLVRLLGFCSEEDKRLLVY-ELMPNGTLSNFLFHEGQRPGWV---------------- 588
           H N+V LLG C++    L+V  E    G LS +L    +R  +V                
Sbjct: 81  HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 589 -QRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
              +  +  VA+G+ +L      + IH D+  +N+LL  K +      KI DFG+++ + 
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV-----VKICDFGLARDIY 190
Query: 648 KDQTRTDT-NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           KD       + R  + ++APE + +   T + DV+SFGV+L EI 
Sbjct: 191 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 235

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 45/231 (19%)
Query: 494 KLVGTGSSGKV-YRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVR 551
           K++G GSSG V ++G  + +     +AVK++  D        + E+K++  +  H N++R
Sbjct: 39  KILGYGSSGTVVFQGSFQGR----PVAVKRMLIDFCDIA---LMEIKLLTESDDHPNVIR 91
Query: 552 LLGFCSEEDKRLLVYEL------------MPNGTLSNFLFHEGQRPGWVQRVEIALGVAR 599
              +CSE   R L   L              N +  N    +   P     + +   +A 
Sbjct: 92  Y--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP-----ISLLRQIAS 144
Query: 600 GLLYLHEECETQIIHCDIKPQNVLL--------DLKTLDTNYMAKISDFGISKLLNKDQT 651
           G+ +LH     +IIH D+KPQN+L+        D +T   N    ISDFG+ K L+  Q 
Sbjct: 145 GVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 652 RTDTNMR---GTMGYVAPEWLRNVP---VTTKVDVFSFGVMLLEIICGRRH 696
               N+    GT G+ APE L       +T  +D+FS G +   I+   +H
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 22/209 (10%)
Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLE-KDIEKTNEEFMTELKIIGRTHHKN 548
           F+KL  +G GS G+V++GI     TQ  +A+K ++ ++ E   E+   E+ ++ +     
Sbjct: 9   FTKLEKIGKGSFGEVFKGIDN--RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLH 605
           + +  G   ++ K  ++ E +  G+  + L      PG +   +IA     + +GL YLH
Sbjct: 67  VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLH 121
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
            E +   IH DIK  NVLL       +   K++DFG++  L   Q + +  + GT  ++A
Sbjct: 122 SEKK---IHRDIKAANVLLS-----EHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMA 172
Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           PE ++     +K D++S G+  +E+  G 
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIELARGE 201

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 7/165 (4%)
Query: 529 KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWV 588
           + +++   E +I     H N+VRL    SEE    LV++L+  G L    F +     + 
Sbjct: 45  RDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYY 100
Query: 589 QRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK 648
              + +  + + L  ++      I+H D+KP+N+LL  K+       K++DFG++  +  
Sbjct: 101 SEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKS--KGAAVKLADFGLAIEVQG 158
Query: 649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           DQ +      GT GY++PE LR  P    VD+++ GV+L  ++ G
Sbjct: 159 DQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 27/224 (12%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK----------DIEKTNE 532
           +E  EA      L+G G  G V+ G  RL D ++++A+K + +          D      
Sbjct: 26  REAFEAEYRLGPLLGKGGFGTVFAG-HRLTD-RLQVAIKVIPRNRVLGWSPLSDSVTCPL 83
Query: 533 EFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRV 591
           E     K+     H  ++RLL +   ++  +LV E  +P   L +++  +G       R 
Sbjct: 84  EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRC 143
Query: 592 EIALGVARGLLYLHEECETQ-IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
                VA       + C ++ ++H DIK +N+L+DL+       AK+ DFG   LL+ D+
Sbjct: 144 FFGQVVAA-----IQHCHSRGVVHRDIKDENILIDLR----RGCAKLIDFGSGALLH-DE 193
Query: 651 TRTDTNMRGTMGYVAPEWL-RNVPVTTKVDVFSFGVMLLEIICG 693
             TD +  GT  Y  PEW+ R+        V+S G++L +++CG
Sbjct: 194 PYTDFD--GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 20/207 (9%)
Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNL 549
           F+KL  +G GS G+VY+GI       + I +  LE+  ++  +    E+ ++ +     +
Sbjct: 21  FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYI 79
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLHE 606
            R  G   +  K  ++ E +  G+  + L     +PG ++   IA     + +GL YLH 
Sbjct: 80  TRYFGSYLKSTKLWIIMEYLGGGSALDLL-----KPGPLEETYIATILREILKGLDYLHS 134
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
           E +   IH DIK  NVLL  +        K++DFG++  L   Q + +  + GT  ++AP
Sbjct: 135 ERK---IHRDIKAANVLLSEQG-----DVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAP 185
Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICG 693
           E ++      K D++S G+  +E+  G
Sbjct: 186 EVIKQSAYDFKADIWSLGITAIELAKG 212

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 45/231 (19%)
Query: 494 KLVGTGSSGKV-YRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVR 551
           K++G GSSG V ++G  + +     +AVK++  D        + E+K++  +  H N++R
Sbjct: 39  KILGYGSSGTVVFQGSFQGR----PVAVKRMLIDFCDIA---LMEIKLLTESDDHPNVIR 91
Query: 552 LLGFCSEEDKRLLVYEL------------MPNGTLSNFLFHEGQRPGWVQRVEIALGVAR 599
              +CSE   R L   L              N +  N    +   P     + +   +A 
Sbjct: 92  Y--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNP-----ISLLRQIAS 144
Query: 600 GLLYLHEECETQIIHCDIKPQNVLL--------DLKTLDTNYMAKISDFGISKLLNKDQT 651
           G+ +LH     +IIH D+KPQN+L+        D +T   N    ISDFG+ K L+  Q 
Sbjct: 145 GVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 652 RTDTNMR---GTMGYVAPEWLRNVP---VTTKVDVFSFGVMLLEIICGRRH 696
               N+    GT G+ APE L       +T  +D+FS G +   I+   +H
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 38  KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 96  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 150
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 151 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 205
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 206 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 46  KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 158
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 213
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 214 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 32  KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 90  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 144
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 199
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 200 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 90/203 (44%), Gaps = 21/203 (10%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           VG GS G+V+R  ++ K T  + AVKK+  ++ +  E     L          +V L G 
Sbjct: 82  VGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFRVEE-----LVACAGLSSPRIVPLYGA 134
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVA-RGLLYLHEECETQIIH 614
             E     +  EL+  G+L   +   G  P    R    LG A  GL YLH     +I+H
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLIKQMGCLP--EDRALYYLGQALEGLEYLHTR---RILH 189
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD----QTRTDTNMRGTMGYVAPEWLR 670
            D+K  NVLL          A + DFG +  L  D       T   + GT  ++APE + 
Sbjct: 190 GDVKADNVLLS----SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 245
Query: 671 NVPVTTKVDVFSFGVMLLEIICG 693
             P   KVD++S   M+L ++ G
Sbjct: 246 GKPCDAKVDIWSSCCMMLHMLNG 268

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 105/209 (50%), Gaps = 22/209 (10%)
Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLE-KDIEKTNEEFMTELKIIGRTHHKN 548
           F+KL  +G GS G+V++GI     TQ  +A+K ++ ++ E   E+   E+ ++ +     
Sbjct: 25  FTKLERIGKGSFGEVFKGIDN--RTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLH 605
           + +  G   +  K  ++ E +  G+  + L     R G     +IA     + +GL YLH
Sbjct: 83  VTKYYGSYLKGSKLWIIMEYLGGGSALDLL-----RAGPFDEFQIATMLKEILKGLDYLH 137
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
            E +   IH DIK  NVLL  +        K++DFG++  L   Q + +T + GT  ++A
Sbjct: 138 SEKK---IHRDIKAANVLLSEQG-----DVKLADFGVAGQLTDTQIKRNTFV-GTPFWMA 188
Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           PE ++     +K D++S G+  +E+  G 
Sbjct: 189 PEVIQQSAYDSKADIWSLGITAIELAKGE 217

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 18  KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 76  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 130
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 185
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 186 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 32  KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 90  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 144
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 199
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 200 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 32  KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 90  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 144
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 199
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 200 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 31  KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 89  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 143
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 198
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 199 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 36/225 (16%)
Query: 492 FSKLVGTGSSGKVYR----GILRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKI-IGRTH 545
             K +G G+ G+V      GI +    +  +AVK L E      +   M+ELKI I   H
Sbjct: 68  LGKPLGRGAFGQVIEADAFGIDKTATCRT-VAVKMLKEGATHSEHRALMSELKILIHIGH 126
Query: 546 HKNLVRLLGFCSEEDKRLLV-YELMPNGTLSNFLFHEGQRPGWV---------------- 588
           H N+V LLG C++    L+V  E    G LS +L    +R  +V                
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTL 184
Query: 589 -QRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
              +  +  VA+G+ +L      + IH D+  +N+LL  K +      KI DFG+++ + 
Sbjct: 185 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV-----VKICDFGLARDIY 236
Query: 648 KDQTRTDT-NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           KD       + R  + ++APE + +   T + DV+SFGV+L EI 
Sbjct: 237 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 281

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 19  KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 77  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 131
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 186
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 187 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 4   KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 62  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 116
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 171
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 172 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 31  KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 89  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 143
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 198
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 199 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 32  KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 90  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 144
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 199
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 200 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 19  KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 77  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 131
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 186
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 187 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 19  KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 77  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 131
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 186
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 187 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 18  KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 76  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 130
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 185
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 186 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 31  KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 89  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 143
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 198
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 199 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 23/208 (11%)
Query: 494 KLVGTGSSGKVYR-GILRLKDTQIEIAVKKLEKDIEKTNEEFMTELK--IIGRTHHKNLV 550
           K++G GS GKV+    +   D +   A+K L+K   K  +   T+++  I+   +H  +V
Sbjct: 30  KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 551 RLLGFCSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
           +L      E K  L+ + +  G L        +F E     ++  + +AL       +LH
Sbjct: 90  KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD------HLH 143
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                 II+ D+KP+N+LLD          K++DFG+SK  + D  +   +  GT+ Y+A
Sbjct: 144 S---LGIIYRDLKPENILLD-----EEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMA 194
Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           PE +     T   D +SFGV++ E++ G
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTG 222

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 46  KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 158
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 213
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 214 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 51  KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 108
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 109 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 163
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 164 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 218
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 219 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 31  KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 89  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 143
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 198
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 199 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 4   KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 62  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 116
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 171
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 172 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 23/208 (11%)
Query: 494 KLVGTGSSGKVYR-GILRLKDTQIEIAVKKLEKDIEKTNEEFMTELK--IIGRTHHKNLV 550
           K++G GS GKV+    +   D +   A+K L+K   K  +   T+++  I+   +H  +V
Sbjct: 31  KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 551 RLLGFCSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
           +L      E K  L+ + +  G L        +F E     ++  + +AL       +LH
Sbjct: 91  KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD------HLH 144
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                 II+ D+KP+N+LLD          K++DFG+SK  + D  +   +  GT+ Y+A
Sbjct: 145 S---LGIIYRDLKPENILLD-----EEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMA 195
Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           PE +     T   D +SFGV++ E++ G
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTG 223

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 25/218 (11%)
Query: 487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMTELKI 540
           E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         E+ +
Sbjct: 3   ESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPMEVVL 60
Query: 541 IGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           + +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+A   
Sbjct: 61  LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEELARSF 115
Query: 598 ARGLLYLHEECETQ-IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
              +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   TD +
Sbjct: 116 FWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVYTDFD 170
Query: 657 MRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
             GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 171 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 3   KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 61  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 115
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 170
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 171 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 4   KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 62  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 116
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 171
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 172 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 101/220 (45%), Gaps = 37/220 (16%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-------DIEKTN----------EEFMT 536
           +++ T + GK  + IL  KD +   A+KK EK       D  K+N          ++F  
Sbjct: 34  RIIRTLNQGKFNKIILCEKDNKF-YALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKN 92
Query: 537 ELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNF---LFHEGQRPGWVQRVEI 593
           EL+II    ++  +   G  +  D+  ++YE M N ++  F    F   +       +++
Sbjct: 93  ELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQV 152
Query: 594 ALGVARGLL----YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
              + + +L    Y+H E    I H D+KP N+L     +D N   K+SDFG S+ +   
Sbjct: 153 IKCIIKSVLNSFSYIHNE--KNICHRDVKPSNIL-----MDKNGRVKLSDFGESEYMVDK 205
Query: 650 QTRTDTNMRGTMGYVAPEWLRNVPVT--TKVDVFSFGVML 687
           + +     RGT  ++ PE+  N       KVD++S G+ L
Sbjct: 206 KIKGS---RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 31/209 (14%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH---------- 545
           +G G+ GKV  G   L  T  ++AVK L       N + +  L ++G+            
Sbjct: 24  LGVGTFGKVKVGKHEL--TGHKVAVKIL-------NRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
           H ++++L    S      +V E +  G L +++   G+      R  +   +  G+ Y H
Sbjct: 75  HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESR-RLFQQILSGVDYCH 133
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                 ++H D+KP+NVL     LD +  AKI+DFG+S +++  +    +   G+  Y A
Sbjct: 134 RH---MVVHRDLKPENVL-----LDAHMNAKIADFGLSNMMSDGEFLRXSC--GSPNYAA 183
Query: 666 PEWLR-NVPVTTKVDVFSFGVMLLEIICG 693
           PE +   +    +VD++S GV+L  ++CG
Sbjct: 184 PEVISGRLYAGPEVDIWSSGVILYALLCG 212

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 23/208 (11%)
Query: 494 KLVGTGSSGKVYR-GILRLKDTQIEIAVKKLEKDIEKTNEEFMTELK--IIGRTHHKNLV 550
           K++G GS GKV+    +   D +   A+K L+K   K  +   T+++  I+   +H  +V
Sbjct: 30  KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 551 RLLGFCSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
           +L      E K  L+ + +  G L        +F E     ++  + +AL       +LH
Sbjct: 90  KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD------HLH 143
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                 II+ D+KP+N+LLD          K++DFG+SK  + D  +   +  GT+ Y+A
Sbjct: 144 S---LGIIYRDLKPENILLD-----EEGHIKLTDFGLSKE-SIDHEKKAYSFCGTVEYMA 194
Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           PE +     T   D +SFGV++ E++ G
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTG 222

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 25/218 (11%)
Query: 487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMTELKI 540
           E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         E+ +
Sbjct: 3   ESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPMEVVL 60
Query: 541 IGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           + +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+A   
Sbjct: 61  LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEELARSF 115
Query: 598 ARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
              +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   TD +
Sbjct: 116 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVYTDFD 170
Query: 657 MRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
             GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 171 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 2   KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 59
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 60  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 114
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 115 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 169
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 170 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 209

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMT 536
           +E  E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         
Sbjct: 26  KEPLESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPM 83
Query: 537 ELKIIGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEI 593
           E+ ++ +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+
Sbjct: 84  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEEL 138
Query: 594 ALGVARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           A      +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   
Sbjct: 139 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVY 193
Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           TD +  GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 194 TDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 49/235 (20%)
Query: 494 KLVGTGSSGKV-YRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVR 551
           K++G GSSG V ++G  + +     +AVK++  D        + E+K++  +  H N++R
Sbjct: 21  KILGYGSSGTVVFQGSFQGR----PVAVKRMLIDFCDIA---LMEIKLLTESDDHPNVIR 73
Query: 552 LLGFCSEEDKRLLVYEL------------MPNGTLSNFLFHEGQRPGWVQRVEIALGVAR 599
              +CSE   R L   L              N +  N    +   P  + R +IA GVA 
Sbjct: 74  Y--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR-QIASGVA- 129
Query: 600 GLLYLHEECETQIIHCDIKPQNVLL--------DLKTLDTNYMAKISDFGISKLLNKDQT 651
              +LH     +IIH D+KPQN+L+        D +T   N    ISDFG+ K L+  Q 
Sbjct: 130 ---HLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 183
Query: 652 RTDTNMR---GTMGYVAPEWLRNV-------PVTTKVDVFSFGVMLLEIICGRRH 696
               N+    GT G+ APE L           +T  +D+FS G +   I+   +H
Sbjct: 184 XFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGI-LRLKDTQIEIAVKKLEK-DIEKTNEEFMTELKII 541
           E+Q       + +G G  G V++GI +  ++  + +A+K  +    +   E+F+ E   +
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +  H ++V+L+G  +E +   ++ EL   G L +FL            +  A  ++  L
Sbjct: 446 RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 504
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL  +   + +H DI  +NVL+      +N   K+ DFG+S+ +        +  +  +
Sbjct: 505 AYLESK---RFVHRDIAARNVLVS-----SNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 556
Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            ++APE +     T+  DV+ FGV + EI+
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEIL 586

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 90/203 (44%), Gaps = 21/203 (10%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS G+V+R  ++ K T  + AVKK+  ++ +  E     L          +V L G 
Sbjct: 80  LGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFRVEE-----LVACAGLSSPRIVPLYGA 132
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVA-RGLLYLHEECETQIIH 614
             E     +  EL+  G+L   +   G  P    R    LG A  GL YLH     +I+H
Sbjct: 133 VREGPWVNIFMELLEGGSLGQLIKQMGCLP--EDRALYYLGQALEGLEYLHTR---RILH 187
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD----QTRTDTNMRGTMGYVAPEWLR 670
            D+K  NVLL          A + DFG +  L  D       T   + GT  ++APE + 
Sbjct: 188 GDVKADNVLLS----SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 243
Query: 671 NVPVTTKVDVFSFGVMLLEIICG 693
             P   KVD++S   M+L ++ G
Sbjct: 244 GKPCDAKVDIWSSCCMMLHMLNG 266

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 39/237 (16%)
Query: 467 YFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD 526
           YF   SME   R    Q++ E + G + LV +   G+ Y  +++      EI + ++   
Sbjct: 19  YF--QSMEKYVR---LQKIGEGSFGKAILVKSTEDGRQY--VIK------EINISRMS-- 63
Query: 527 IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTL-------SNFLF 579
             K  EE   E+ ++    H N+V+      E     +V +    G L          LF
Sbjct: 64  -SKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLF 122
Query: 580 HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD 639
            E Q   W  ++ +AL       ++H+    +I+H DIK QN+ L   T D     ++ D
Sbjct: 123 QEDQILDWFVQICLALK------HVHDR---KILHRDIKSQNIFL---TKDGT--VQLGD 168
Query: 640 FGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRH 696
           FGI+++LN         + GT  Y++PE   N P   K D+++ G +L E +C  +H
Sbjct: 169 FGIARVLNSTVELARACI-GTPYYLSPEICENKPYNNKSDIWALGCVLYE-LCTLKH 223

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 25/218 (11%)
Query: 487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE-----EFMTELKI 540
           E+      L+G+G  G VY GI R+ D  + +A+K +EKD I    E         E+ +
Sbjct: 3   ESQYQVGPLLGSGGFGSVYSGI-RVSDN-LPVAIKHVEKDRISDWGELPNGTRVPMEVVL 60
Query: 541 IGR--THHKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           + +  +    ++RLL +    D  +L+ E   P   L +F+   G       + E+A   
Sbjct: 61  LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEELARSF 115
Query: 598 ARGLLYLHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
              +L     C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   TD +
Sbjct: 116 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVYTDFD 170
Query: 657 MRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICG 693
             GT  Y  PEW+R      +   V+S G++L +++CG
Sbjct: 171 --GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 494 KLVGTGSSGKVYRG--ILRLKDTQIEIAVKKLEKDIEKTNEEFMTE-LKIIGRTHHKNLV 550
           K++G+G  G V++G  I   +  +I + +K +E    + + + +T+ +  IG   H ++V
Sbjct: 37  KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     + LV + +P G+L + +       G    +   + +A+G+ YL E    
Sbjct: 97  RLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG-- 153
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWL 669
            ++H ++  +NVL     L +    +++DFG++ LL  D  +   +  +  + ++A E +
Sbjct: 154 -MVHRNLAARNVL-----LKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 207
Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
                T + DV+S+GV + E++
Sbjct: 208 HFGKYTHQSDVWSYGVTVWELM 229

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +GTGS G+  + I R  D +I +  K+L+     E   +  ++E+ ++    H N+VR  
Sbjct: 14  IGTGSYGRCQK-IRRKSDGKI-LVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 554 GFCSEEDKRLL--VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
               +     L  V E    G L++ +  +G +       E  L V   L    +EC  +
Sbjct: 72  DRIIDRTNTTLYIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 612 ------IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                 ++H D+KP NV LD K        K+ DFG++++LN D +   T + GT  Y++
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQ-----NVKLGDFGLARILNHDTSFAKTFV-GTPYYMS 184
Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEI 690
           PE +  +    K D++S G +L E+
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 106/204 (51%), Gaps = 21/204 (10%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNE---EFMTELKIIGRTHHKNLVRL 552
           +G G+ GKV  G  +L  T  ++AVK L +   ++ +   +   E++ +    H ++++L
Sbjct: 19  LGVGTFGKVKIGEHQL--TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ- 611
               S      +V E +  G L +++   G+    V+ +E A  + + +L   + C    
Sbjct: 77  YQVISTPTDFFMVMEYVSGGELFDYICKHGR----VEEME-ARRLFQQILSAVDYCHRHM 131
Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ-TRTDTNMRGTMGYVAPEWLR 670
           ++H D+KP+NVL     LD +  AKI+DFG+S +++  +  RT     G+  Y APE + 
Sbjct: 132 VVHRDLKPENVL-----LDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPEVIS 183
Query: 671 -NVPVTTKVDVFSFGVMLLEIICG 693
             +    +VD++S GV+L  ++CG
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCG 207

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 15/218 (6%)
Query: 482 FQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN------EEFM 535
           FQ + E      + +G+G    V +   R K T  E A K ++K    ++      EE  
Sbjct: 20  FQSMVEDHYEMGEELGSGQFAIVRK--CRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIE 77
Query: 536 TELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL 595
            E+ I+    H N++ L      +   +L+ EL+  G L +FL  E +     +  +   
Sbjct: 78  REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEATQFLK 136
Query: 596 GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT 655
            +  G+ YLH +   +I H D+KP+N++L  K +  N   K+ DFGI+  +  +      
Sbjct: 137 QILDGVHYLHSK---RIAHFDLKPENIMLLDKNV-PNPRIKLIDFGIAHKI--EAGNEFK 190
Query: 656 NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           N+ GT  +VAPE +   P+  + D++S GV+   ++ G
Sbjct: 191 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 11/210 (5%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGI-LRLKDTQIEIAVKKLEK-DIEKTNEEFMTELKII 541
           E+Q       + +G G  G V++GI +  ++  + +A+K  +    +   E+F+ E   +
Sbjct: 6   EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +  H ++V+L+G  +E +   ++ EL   G L +FL            +  A  ++  L
Sbjct: 66  RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 124
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL  +   + +H DI  +NVL+           K+ DFG+S+ +        +  +  +
Sbjct: 125 AYLESK---RFVHRDIAARNVLVS-----ATDCVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            ++APE +     T+  DV+ FGV + EI+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEIL 206

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 7/164 (4%)
Query: 530 TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQ 589
           + EE   E+ I+    H N++ L      +   +L+ EL+  G L +FL  E +     +
Sbjct: 58  SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDE 116
Query: 590 RVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
             +    +  G+ YLH +   +I H D+KP+N++L  K +  N   K+ DFGI+  +  +
Sbjct: 117 ATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNV-PNPRIKLIDFGIAHKI--E 170
Query: 650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
                 N+ GT  +VAPE +   P+  + D++S GV+   ++ G
Sbjct: 171 AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS G VY+ I   K+T   +A+K++   +E   +E + E+ I+ +    ++V+  G 
Sbjct: 37  LGEGSYGSVYKAI--HKETGQIVAIKQV--PVESDLQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
             +     +V E    G++S+ +    +     +   I     +GL YLH     + IH 
Sbjct: 93  YFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHR 149
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT 675
           DIK  N+L     L+T   AK++DFG++  L  D       + GT  ++APE ++ +   
Sbjct: 150 DIKAGNIL-----LNTEGHAKLADFGVAGQLT-DXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 676 TKVDVFSFGVMLLEIICGR 694
              D++S G+  +E+  G+
Sbjct: 204 CVADIWSLGITAIEMAEGK 222

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 485 LQEATKG-------FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTE 537
            Q +TKG           +G GS G+V   I   K T+I  A KK+ K   +  + F  E
Sbjct: 16  FQGSTKGDINQYYTLENTIGRGSWGEV--KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQE 73
Query: 538 LKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV 597
           ++I+    H N++RL     +     LV EL   G L   + H+      V R   A  +
Sbjct: 74  IEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR-----VFRESDAARI 128
Query: 598 ARGLLYLHEEC-ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ-TRTDT 655
            + +L     C +  + H D+KP+N L    + D+    K+ DFG++      +  RT  
Sbjct: 129 MKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSP--LKLIDFGLAARFKPGKMMRTKV 186
Query: 656 NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
              GT  YV+P+ L  +    + D +S GVM+  ++CG
Sbjct: 187 ---GTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCG 220

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 82/164 (50%), Gaps = 7/164 (4%)
Query: 530 TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQ 589
           + EE   E+ I+    H N++ L      +   +L+ EL+  G L +FL  E +     +
Sbjct: 51  SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDE 109
Query: 590 RVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
             +    +  G+ YLH +   +I H D+KP+N++L  K +  N   K+ DFGI+  +  +
Sbjct: 110 ATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNV-PNPRIKLIDFGIAHKI--E 163
Query: 650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
                 N+ GT  +VAPE +   P+  + D++S GV+   ++ G
Sbjct: 164 AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS G+V   I   K T+I  A KK+ K   +  + F  E++I+    H N++RL   
Sbjct: 17  IGRGSWGEV--KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 74
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC-ETQIIH 614
             +     LV EL   G L   + H+      V R   A  + + +L     C +  + H
Sbjct: 75  FEDNTDIYLVMELCTGGELFERVVHKR-----VFRESDAARIMKDVLSAVAYCHKLNVAH 129
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ-TRTDTNMRGTMGYVAPEWLRNVP 673
            D+KP+N L    + D+    K+ DFG++      +  RT     GT  YV+P+ L  + 
Sbjct: 130 RDLKPENFLFLTDSPDSPL--KLIDFGLAARFKPGKMMRTKV---GTPYYVSPQVLEGL- 183
Query: 674 VTTKVDVFSFGVMLLEIICG 693
              + D +S GVM+  ++CG
Sbjct: 184 YGPECDEWSAGVMMYVLLCG 203

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 100/204 (49%), Gaps = 16/204 (7%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           ++++G G  G+V++       T +++A K ++    K  EE   E+ ++ +  H NL++L
Sbjct: 94  TEILGGGRFGQVHK--CEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQI 612
                 ++  +LV E +  G L + +  E      +  +     +  G+ ++H+     I
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ---MYI 208
Query: 613 IHCDIKPQNVLL---DLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
           +H D+KP+N+L    D K +      KI DFG+++   K + +   N  GT  ++APE +
Sbjct: 209 LHLDLKPENILCVNRDAKQI------KIIDFGLARRY-KPREKLKVNF-GTPEFLAPEVV 260
Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
               V+   D++S GV+   ++ G
Sbjct: 261 NYDFVSFPTDMWSVGVIAYMLLSG 284

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 97/228 (42%), Gaps = 47/228 (20%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKI--IGRTHHKNLVR 551
           +L+G G  G VY+G L     +  +AVK          + F+ E  I  +    H N+ R
Sbjct: 19  ELIGRGRYGAVYKGSL----DERPVAVKVFSF---ANRQNFINEKNIYRVPLMEHDNIAR 71
Query: 552 LLGFCSEE----DKR---LLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLLY 603
            +    +E    D R   LLV E  PNG+L  +L  H      WV    +A  V RGL Y
Sbjct: 72  FI--VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD---WVSSCRLAHSVTRGLAY 126
Query: 604 LHEEC------ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN-------KDQ 650
           LH E       +  I H D+  +NVL     +  +    ISDFG+S  L         ++
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVL-----VKNDGTCVISDFGLSMRLTGNRLVRPGEE 181
Query: 651 TRTDTNMRGTMGYVAPEWLRNV-------PVTTKVDVFSFGVMLLEII 691
                +  GT+ Y+APE L              +VD+++ G++  EI 
Sbjct: 182 DNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           F  ++G GS GKV   +   K T    AVK L+KD+   +++    M E +++       
Sbjct: 24  FLMVLGKGSFGKVM--LSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81
Query: 549 LVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQ--RPGWVQRVEIALGVARGLLYLH 605
            +  L  C +   RL  V E +  G L   ++H  Q  R      V  A  +A GL +L 
Sbjct: 82  FLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 138
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
            +    II+ D+K  NV+LD     +    KI+DFG+ K    D   T     GT  Y+A
Sbjct: 139 SKG---IIYRDLKLDNVMLD-----SEGHIKIADFGMCKENIWDGVTT-KXFCGTPDYIA 189
Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           PE +   P    VD ++FGV+L E++ G+
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           F  ++G GS GKV   +   K T    AVK L+KD+   +++    M E +++       
Sbjct: 345 FLMVLGKGSFGKVM--LSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402
Query: 549 LVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQ--RPGWVQRVEIALGVARGLLYLH 605
            +  L  C +   RL  V E +  G L   ++H  Q  R      V  A  +A GL +L 
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 459
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
            +    II+ D+K  NV+LD     +    KI+DFG+ K    D   T     GT  Y+A
Sbjct: 460 SK---GIIYRDLKLDNVMLD-----SEGHIKIADFGMCKENIWDGVTT-KXFCGTPDYIA 510
Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           PE +   P    VD ++FGV+L E++ G+
Sbjct: 511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS G+V+R  +  K T  + AVKK+  ++ +  EE M      G T  + +V L G 
Sbjct: 82  LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFRA-EELMA---CAGLTSPR-IVPLYGA 134
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVA-RGLLYLHEECETQIIH 614
             E     +  EL+  G+L   +  +G  P    R    LG A  GL YLH     +I+H
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLVKEQGCLP--EDRALYYLGQALEGLEYLHSR---RILH 189
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD----TNMRGTMGYVAPEWLR 670
            D+K  NVLL   + D ++ A + DFG +  L  D    D      + GT  ++APE + 
Sbjct: 190 GDVKADNVLL---SSDGSHAA-LCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVL 245
Query: 671 NVPVTTKVDVFSFGVMLLEIICG 693
                 KVDV+S   M+L ++ G
Sbjct: 246 GRSCDAKVDVWSSCCMMLHMLNG 268

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRT-HHKNL 549
           K++G GS GKV+  +   K T    A+K L+KD+   +++    M E +++     H  L
Sbjct: 23  KMLGKGSFGKVF--LAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 80
Query: 550 VRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
             +  FC+ + K     V E +  G L  +      +    +    A  +  GL +LH +
Sbjct: 81  THM--FCTFQTKENLFFVMEYLNGGDLM-YHIQSCHKFDLSRATFYAAEIILGLQFLHSK 137
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               I++ D+K  N+LLD      +   KI+DFG+ K       +T+    GT  Y+APE
Sbjct: 138 G---IVYRDLKLDNILLD-----KDGHIKIADFGMCKENMLGDAKTNX-FCGTPDYIAPE 188
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            L        VD +SFGV+L E++ G+
Sbjct: 189 ILLGQKYNHSVDWWSFGVLLYEMLIGQ 215

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 494 KLVGTGSSGKVY--RGILRLKDTQIEIAVKKLEKDIEKTN--EEFMTELKIIGRTHHKNL 549
           K +G G+  KV   R IL    T  E+AVK ++K    ++  ++   E++I+   +H N+
Sbjct: 20  KTIGKGNFAKVKLARHIL----TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V+L      E    LV E    G + ++L   G+      R +    +   + Y H++  
Sbjct: 76  VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF- 133
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I+H D+K +N+LLD    D N   KI+DFG S        + DT   G+  Y APE  
Sbjct: 134 --IVHRDLKAENLLLD---ADMN--IKIADFGFSNEFTFG-NKLDT-FCGSPPYAAPELF 184
Query: 670 RNVPVT-TKVDVFSFGVMLLEIICG 693
           +       +VDV+S GV+L  ++ G
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS G+V+R  +  K T  + AVKK+  ++ +  EE M      G T  + +V L G 
Sbjct: 101 LGRGSFGEVHR--MEDKQTGFQCAVKKVRLEVFRA-EELMA---CAGLTSPR-IVPLYGA 153
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVA-RGLLYLHEECETQIIH 614
             E     +  EL+  G+L   +  +G  P    R    LG A  GL YLH     +I+H
Sbjct: 154 VREGPWVNIFMELLEGGSLGQLVKEQGCLP--EDRALYYLGQALEGLEYLHSR---RILH 208
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD----QTRTDTNMRGTMGYVAPEWLR 670
            D+K  NVLL   + D ++ A + DFG +  L  D       T   + GT  ++APE + 
Sbjct: 209 GDVKADNVLL---SSDGSHAA-LCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVL 264
Query: 671 NVPVTTKVDVFSFGVMLLEIICG 693
                 KVDV+S   M+L ++ G
Sbjct: 265 GRSCDAKVDVWSSCCMMLHMLNG 287

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 24/162 (14%)
Query: 546 HKNLVRLLGF----CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
           H+N+++ +G      S +    L+      G+LS+FL  +     W +   IA  +ARGL
Sbjct: 77  HENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL--KANVVSWNELCHIAETMARGL 134
Query: 602 LYLHEEC-------ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD 654
            YLHE+        +  I H DIK +NVL     L  N  A I+DFG++      ++  D
Sbjct: 135 AYLHEDIPGLKDGHKPAISHRDIKSKNVL-----LKNNLTACIADFGLALKFEAGKSAGD 189
Query: 655 TNMR-GTMGYVAPEWLRNV-----PVTTKVDVFSFGVMLLEI 690
           T+ + GT  Y+APE L            ++D+++ G++L E+
Sbjct: 190 THGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 494 KLVGTGSSGKVY--RGILRLKDTQIEIAVKKLEKDIEKTN--EEFMTELKIIGRTHHKNL 549
           K +G G+  KV   R IL    T  E+AVK ++K    ++  ++   E++I+   +H N+
Sbjct: 13  KTIGKGNFAKVKLARHIL----TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V+L      E    LV E    G + ++L   G    W++  E A    R ++   + C 
Sbjct: 69  VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG----WMKEKE-ARAKFRQIVSAVQYCH 123
Query: 610 TQ-IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
            + I+H D+K +N+LLD    D N   KI+DFG S        + DT   G+  Y APE 
Sbjct: 124 QKFIVHRDLKAENLLLD---ADMN--IKIADFGFSNEFTFG-NKLDT-FCGSPPYAAPEL 176
Query: 669 LRNVPVT-TKVDVFSFGVMLLEIICG 693
            +       +VDV+S GV+L  ++ G
Sbjct: 177 FQGKKYDGPEVDVWSLGVILYTLVSG 202

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRT-HHKNL 549
           K++G GS GKV+  +   K T    A+K L+KD+   +++    M E +++     H  L
Sbjct: 24  KMLGKGSFGKVF--LAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL 81
Query: 550 VRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
             +  FC+ + K     V E +  G L  +      +    +    A  +  GL +LH +
Sbjct: 82  THM--FCTFQTKENLFFVMEYLNGGDLM-YHIQSCHKFDLSRATFYAAEIILGLQFLHSK 138
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               I++ D+K  N+LLD      +   KI+DFG+ K       +T+    GT  Y+APE
Sbjct: 139 G---IVYRDLKLDNILLD-----KDGHIKIADFGMCKENMLGDAKTN-EFCGTPDYIAPE 189
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            L        VD +SFGV+L E++ G+
Sbjct: 190 ILLGQKYNHSVDWWSFGVLLYEMLIGQ 216

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +L+G G  G+VY G       ++ I +  +E+D E   + F  E+    +T H+N+V  +
Sbjct: 39  ELIGKGRFGQVYHGRWH---GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
           G C       ++  L    TL + +          +  +IA  + +G+ YLH +    I+
Sbjct: 96  GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---IL 152
Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT-RTDTNMR---GTMGYVAPEWL 669
           H D+K +NV  D      N    I+DFG+  +    Q  R +  +R   G + ++APE +
Sbjct: 153 HKDLKSKNVFYD------NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEII 206
Query: 670 RN---------VPVTTKVDVFSFGVMLLEI 690
           R          +P +   DVF+ G +  E+
Sbjct: 207 RQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 494 KLVGTGSSGKVY--RGILRLKDTQIEIAVKKLEKDIEKTN--EEFMTELKIIGRTHHKNL 549
           K +G G+  KV   R IL    T  E+AVK ++K    ++  ++   E++I+   +H N+
Sbjct: 20  KTIGKGNFAKVKLARHIL----TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V+L      E    LV E    G + ++L   G+      R +    +   + Y H++  
Sbjct: 76  VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF- 133
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I+H D+K +N+LLD    D N   KI+DFG S        + DT   G+  Y APE  
Sbjct: 134 --IVHRDLKAENLLLD---ADMN--IKIADFGFSNEFTFG-NKLDT-FCGSPPYAAPELF 184
Query: 670 RNVPVT-TKVDVFSFGVMLLEIICG 693
           +       +VDV+S GV+L  ++ G
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 31/211 (14%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFM--------TELKIIGRTHHK 547
           +G G+ GKV++    LK+    +A+K++     +T EE M          L+ +    H 
Sbjct: 19  IGEGAYGKVFKA-RDLKNGGRFVALKRVRV---QTGEEGMPLSTIREVAVLRHLETFEHP 74
Query: 548 NLVRLLGFCS-----EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV--EIALGVARG 600
           N+VRL   C+      E K  LV+E + +  L+ +L  +   PG       ++   + RG
Sbjct: 75  NVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRG 132
Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
           L +LH     +++H D+KPQN+L     + ++   K++DFG++++ +     T   +  T
Sbjct: 133 LDFLHSH---RVVHRDLKPQNIL-----VTSSGQIKLADFGLARIYSFQMALTSVVV--T 182
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + Y APE L      T VD++S G +  E+ 
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +GTGS G+  + I R  D +I +  K+L+     E   +  ++E+ ++    H N+VR  
Sbjct: 14  IGTGSYGRCQK-IRRKSDGKI-LVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 554 GFCSEEDKRLL--VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
               +     L  V E    G L++ +  +G +       E  L V   L    +EC  +
Sbjct: 72  DRIIDRTNTTLYIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 612 ------IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                 ++H D+KP NV LD K        K+ DFG++++LN D +     + GT  Y++
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQ-----NVKLGDFGLARILNHDTSFAKAFV-GTPYYMS 184
Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEI 690
           PE +  +    K D++S G +L E+
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 25/210 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK--DIEKTNEEFMTELK-IIGRTHHKNLV 550
           K++G G+ G+V   ++R K +Q   A+K L K   I++++  F  E + I+   +   +V
Sbjct: 81  KVIGRGAFGEVQ--LVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 138
Query: 551 RLLGFCSEEDKRLL--VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           +L  FC+ +D + L  V E MP G L N + +      W +        A  +L L    
Sbjct: 139 QL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAK-----FYTAEVVLALDAIH 191
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS-KLLNKDQTRTDTNMRGTMGYVAPE 667
              +IH D+KP N+L     LD +   K++DFG   K+        DT + GT  Y++PE
Sbjct: 192 SMGLIHRDVKPDNML-----LDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPE 245
Query: 668 WLRNVP----VTTKVDVFSFGVMLLEIICG 693
            L++         + D +S GV L E++ G
Sbjct: 246 VLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 31/211 (14%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFM--------TELKIIGRTHHK 547
           +G G+ GKV++    LK+    +A+K++     +T EE M          L+ +    H 
Sbjct: 19  IGEGAYGKVFKA-RDLKNGGRFVALKRVRV---QTGEEGMPLSTIREVAVLRHLETFEHP 74
Query: 548 NLVRLLGFCS-----EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV--EIALGVARG 600
           N+VRL   C+      E K  LV+E + +  L+ +L  +   PG       ++   + RG
Sbjct: 75  NVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRG 132
Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
           L +LH     +++H D+KPQN+L     + ++   K++DFG++++ +     T   +  T
Sbjct: 133 LDFLHSH---RVVHRDLKPQNIL-----VTSSGQIKLADFGLARIYSFQMALTSVVV--T 182
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + Y APE L      T VD++S G +  E+ 
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +GTGS G+  + I R  D +I +  K+L+     E   +  ++E+ ++    H N+VR  
Sbjct: 14  IGTGSYGRCQK-IRRKSDGKI-LVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 554 GFCSEEDKRLL--VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
               +     L  V E    G L++ +  +G +       E  L V   L    +EC  +
Sbjct: 72  DRIIDRTNTTLYIVMEYCEGGDLASVI-TKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 612 ------IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                 ++H D+KP NV LD K        K+ DFG++++LN D+        GT  Y++
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQ-----NVKLGDFGLARILNHDEDFA-KEFVGTPYYMS 184
Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEI 690
           PE +  +    K D++S G +L E+
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 31/211 (14%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFM--------TELKIIGRTHHK 547
           +G G+ GKV++    LK+    +A+K++     +T EE M          L+ +    H 
Sbjct: 19  IGEGAYGKVFKA-RDLKNGGRFVALKRVRV---QTGEEGMPLSTIREVAVLRHLETFEHP 74
Query: 548 NLVRLLGFCS-----EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV--EIALGVARG 600
           N+VRL   C+      E K  LV+E + +  L+ +L  +   PG       ++   + RG
Sbjct: 75  NVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRG 132
Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
           L +LH     +++H D+KPQN+L     + ++   K++DFG++++ +     T   +  T
Sbjct: 133 LDFLHSH---RVVHRDLKPQNIL-----VTSSGQIKLADFGLARIYSFQMALTSVVV--T 182
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           + Y APE L      T VD++S G +  E+ 
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDXELKILDFGLAR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 11/210 (5%)
Query: 484 ELQEATKGFSKLVGTGSSGKVYRGI-LRLKDTQIEIAVKKLEK-DIEKTNEEFMTELKII 541
           E+Q       + +G G  G V++GI +  ++  + +A+K  +    +   E+F+ E   +
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
            +  H ++V+L+G  +E +   ++ EL   G L +FL            +  A  ++  L
Sbjct: 446 RQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 504
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL  +   + +H DI  +NVL+           K+ DFG+S+ +        +  +  +
Sbjct: 505 AYLESK---RFVHRDIAARNVLVS-----ATDCVKLGDFGLSRYMEDSTYYKASKGKLPI 556
Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            ++APE +     T+  DV+ FGV + EI+
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEIL 586

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 494 KLVGTGSSGKVY--RGILRLKDTQIEIAVKKLEKDIEKTN--EEFMTELKIIGRTHHKNL 549
           K +G G+  KV   R IL    T  E+AV+ ++K    ++  ++   E++I+   +H N+
Sbjct: 20  KTIGKGNFAKVKLARHIL----TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V+L      E    LV E    G + ++L   G+      R +    +   + Y H++  
Sbjct: 76  VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF- 133
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I+H D+K +N+LLD    D N   KI+DFG S        + DT   G+  Y APE  
Sbjct: 134 --IVHRDLKAENLLLD---ADMN--IKIADFGFSNEFTFG-NKLDT-FCGSPPYAAPELF 184
Query: 670 RNVPVT-TKVDVFSFGVMLLEIICG 693
           +       +VDV+S GV+L  ++ G
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 27/211 (12%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           K++G GS G V++  L   D   E+A+KK+ +D    N E    L+I+    H N+V L 
Sbjct: 46  KVIGNGSFGVVFQAKLVESD---EVAIKKVLQDKRFKNRE----LQIMRIVKHPNVVDLK 98
Query: 554 GFC-SEEDKRL-----LVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYL 604
            F  S  DK+      LV E +P  T+     H  +    +  + I L    + R L Y+
Sbjct: 99  AFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
           H      I H DIKPQN+LLD      + + K+ DFG +K+L   +   + +   +  Y 
Sbjct: 158 HS---IGICHRDIKPQNLLLD----PPSGVLKLIDFGSAKILIAGE--PNVSXICSRYYR 208
Query: 665 APEWLRNVP-VTTKVDVFSFGVMLLEIICGR 694
           APE +      TT +D++S G ++ E++ G+
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQ 239

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKK--LEKDIEKTNEEFMTELKIIGRT 544
           E   G  K +G G+ G VY+      +T    A+KK  LEK+ E      + E+ I+   
Sbjct: 2   EKYHGLEK-IGEGTYGVVYKAQNNYGET---FALKKIRLEKEDEGIPSTTIREISILKEL 57
Query: 545 HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYL 604
            H N+V+L      + + +LV+E +           EG     V      L +  G+ Y 
Sbjct: 58  KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLES-VTAKSFLLQLLNGIAYC 116
Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
           H+    +++H D+KPQN+L++ +        KI+DFG+++       R  T+   T+ Y 
Sbjct: 117 HDR---RVLHRDLKPQNLLINREG-----ELKIADFGLARAFGI-PVRKYTHEVVTLWYR 167
Query: 665 APEWLR-NVPVTTKVDVFSFGVMLLEIICG 693
           AP+ L  +   +T +D++S G +  E++ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL K  +       T  
Sbjct: 28  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSKPFQSIIHAKRTYR 82
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 83  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 141
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 142 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 185
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 186 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKTN-EEFMTELKIIGRTHHKNL 549
             K +G G+  KV   + R   T  E+AVK ++K  +  T+ ++   E++I+   +H N+
Sbjct: 19  LQKTIGKGNFAKV--KLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V+L      E    LV E    G + ++L   G+      R +    +   + Y H++  
Sbjct: 77  VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKY- 134
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I+H D+K +N+LLD    D N   KI+DFG S        + DT   G+  Y APE  
Sbjct: 135 --IVHRDLKAENLLLD---GDMN--IKIADFGFSNEFTVG-NKLDT-FCGSPPYAAPELF 185
Query: 670 RNVPVT-TKVDVFSFGVMLLEIICG 693
           +       +VDV+S GV+L  ++ G
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSG 210

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 96/195 (49%), Gaps = 23/195 (11%)
Query: 510 RLKDTQIEIAVKKLEKDIEK------TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T +E A K ++K   +      + EE   E+ I+ +  H N++ L          +
Sbjct: 32  REKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91
Query: 564 LVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIK 618
           L+ EL+  G L +FL       E +   +++++        G+ YLH +   +I H D+K
Sbjct: 92  LILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGVNYLHTK---KIAHFDLK 142
Query: 619 PQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKV 678
           P+N++L  K +   ++ K+ DFG++  +  +      N+ GT  +VAPE +   P+  + 
Sbjct: 143 PENIMLLDKNIPIPHI-KLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 679 DVFSFGVMLLEIICG 693
           D++S GV+   ++ G
Sbjct: 200 DMWSIGVITYILLSG 214

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKK--LEKDIEKTNEEFMTELKIIGRT 544
           E   G  K +G G+ G VY+      +T    A+KK  LEK+ E      + E+ I+   
Sbjct: 2   EKYHGLEK-IGEGTYGVVYKAQNNYGET---FALKKIRLEKEDEGIPSTTIREISILKEL 57
Query: 545 HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYL 604
            H N+V+L      + + +LV+E +           EG     V      L +  G+ Y 
Sbjct: 58  KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLES-VTAKSFLLQLLNGIAYC 116
Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
           H+    +++H D+KPQN+L++ +        KI+DFG+++       R  T+   T+ Y 
Sbjct: 117 HDR---RVLHRDLKPQNLLINREG-----ELKIADFGLARAFGI-PVRKYTHEVVTLWYR 167
Query: 665 APEWLR-NVPVTTKVDVFSFGVMLLEIICG 693
           AP+ L  +   +T +D++S G +  E++ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 17/192 (8%)
Query: 510 RLKDTQIEIAVKKLEKDIEK------TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T +E A K ++K   +      + EE   E+ I+ +  H N++ L          +
Sbjct: 32  REKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91
Query: 564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL--GVARGLLYLHEECETQIIHCDIKPQN 621
           L+ EL+  G L +FL    Q+    +    +    +  G+ YLH +   +I H D+KP+N
Sbjct: 92  LILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPEN 145
Query: 622 VLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVF 681
           ++L  K +   ++ K+ DFG++  +  +      N+ GT  +VAPE +   P+  + D++
Sbjct: 146 IMLLDKNIPIPHI-KLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMW 202
Query: 682 SFGVMLLEIICG 693
           S GV+   ++ G
Sbjct: 203 SIGVITYILLSG 214

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 96/195 (49%), Gaps = 23/195 (11%)
Query: 510 RLKDTQIEIAVKKLEKDIEK------TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T +E A K ++K   +      + EE   E+ I+ +  H N++ L          +
Sbjct: 32  REKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91
Query: 564 LVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIK 618
           L+ EL+  G L +FL       E +   +++++        G+ YLH +   +I H D+K
Sbjct: 92  LILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGVNYLHTK---KIAHFDLK 142
Query: 619 PQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKV 678
           P+N++L  K +   ++ K+ DFG++  +  +      N+ GT  +VAPE +   P+  + 
Sbjct: 143 PENIMLLDKNIPIPHI-KLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEA 199
Query: 679 DVFSFGVMLLEIICG 693
           D++S GV+   ++ G
Sbjct: 200 DMWSIGVITYILLSG 214

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 17/192 (8%)
Query: 510 RLKDTQIEIAVKKLEKDIEK------TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T +E A K ++K   +      + EE   E+ I+ +  H N++ L          +
Sbjct: 32  REKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91
Query: 564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL--GVARGLLYLHEECETQIIHCDIKPQN 621
           L+ EL+  G L +FL    Q+    +    +    +  G+ YLH +   +I H D+KP+N
Sbjct: 92  LILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPEN 145
Query: 622 VLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVF 681
           ++L  K +   ++ K+ DFG++  +  +      N+ GT  +VAPE +   P+  + D++
Sbjct: 146 IMLLDKNIPIPHI-KLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMW 202
Query: 682 SFGVMLLEIICG 693
           S GV+   ++ G
Sbjct: 203 SIGVITYILLSG 214

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKK--LEKDIEKTNEEFMTELKIIGRT 544
           E   G  K +G G+ G VY+      +T    A+KK  LEK+ E      + E+ I+   
Sbjct: 2   EKYHGLEK-IGEGTYGVVYKAQNNYGET---FALKKIRLEKEDEGIPSTTIREISILKEL 57
Query: 545 HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYL 604
            H N+V+L      + + +LV+E +           EG     V      L +  G+ Y 
Sbjct: 58  KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLES-VTAKSFLLQLLNGIAYC 116
Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
           H+    +++H D+KPQN+L++ +        KI+DFG+++       R  T+   T+ Y 
Sbjct: 117 HDR---RVLHRDLKPQNLLINREG-----ELKIADFGLARAFGI-PVRKYTHEIVTLWYR 167
Query: 665 APEWLR-NVPVTTKVDVFSFGVMLLEIICG 693
           AP+ L  +   +T +D++S G +  E++ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-NEEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      L   ++ +A+KK+     +T  +  + E+KI+ R  H+N++ +  
Sbjct: 35  IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGIND 92
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 93  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 136
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTXDLKICDFGLARVADPDHDHTGFL 188
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 17/192 (8%)
Query: 510 RLKDTQIEIAVKKLEKDIEK------TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T +E A K ++K   +      + EE   E+ I+ +  H N++ L          +
Sbjct: 32  REKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91
Query: 564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL--GVARGLLYLHEECETQIIHCDIKPQN 621
           L+ EL+  G L +FL    Q+    +    +    +  G+ YLH +   +I H D+KP+N
Sbjct: 92  LILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPEN 145
Query: 622 VLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVF 681
           ++L  K +   ++ K+ DFG++  +  +      N+ GT  +VAPE +   P+  + D++
Sbjct: 146 IMLLDKNIPIPHI-KLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMW 202
Query: 682 SFGVMLLEIICG 693
           S GV+   ++ G
Sbjct: 203 SIGVITYILLSG 214

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 21  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 76  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 134
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 135 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDXELKILDFGLAR------ 178
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 179 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 13  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 67
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 68  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 126
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 127 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 170
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 171 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 21  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 76  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 134
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 135 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 178
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 179 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 39  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 93
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 94  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 152
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 153 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 196
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 197 -HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 12  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 66
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 67  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 125
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 126 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 169
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 170 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      L   ++ +A+KK+     +T  +  + E+KI+ R  H+N++ +  
Sbjct: 35  IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 93  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 136
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTXDLKICDFGLARVADPDHDHTGFL 188
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 173
Query: 651 TRTDTNMRGTMG---YVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G +    Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 22  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 76
Query: 537 ELKIIGRTHHKNLVRLLGF------CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL          E +   LV  LM    L+N +  +      VQ 
Sbjct: 77  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 135
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 136 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDSELKILDFGLAR------ 179
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 180 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 13  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 67
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 68  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 126
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 127 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 170
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 171 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 14  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 68
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 69  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 127
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 128 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 171
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 172 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 27  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 81
Query: 537 ELKIIGRTHHKNLVRLLGF------CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL          E +   LV  LM    L+N +  +      VQ 
Sbjct: 82  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 140
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 141 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDXELKILDFGLAR------ 184
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 185 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 18  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 73  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 131
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 132 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDSELKILDFGLAR------ 175
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 176 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 22  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 76
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 77  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 135
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 136 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 179
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 180 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 94/192 (48%), Gaps = 17/192 (8%)
Query: 510 RLKDTQIEIAVKKLEKDIEKTN------EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL 563
           R K T +E A K ++K   + +      EE   E+ I+ +  H N++ L          +
Sbjct: 32  REKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV 91
Query: 564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL--GVARGLLYLHEECETQIIHCDIKPQN 621
           L+ EL+  G L +FL    Q+    +    +    +  G+ YLH +   +I H D+KP+N
Sbjct: 92  LILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPEN 145
Query: 622 VLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVF 681
           ++L  K +   ++ K+ DFG++  +  +      N+ GT  +VAPE +   P+  + D++
Sbjct: 146 IMLLDKNIPIPHI-KLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMW 202
Query: 682 SFGVMLLEIICG 693
           S GV+   ++ G
Sbjct: 203 SIGVITYILLSG 214

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKSQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+ +      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDSELKILDFGLCR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 18  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 537 ELKIIGRTHHKNLVRLLGF------CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL          E +   LV  LM    L+N +  +      VQ 
Sbjct: 73  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 131
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 132 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 175
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 176 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 494 KLVGTGSSGKVY--RGILRLKDTQIEIAVKKLEKDIEKTN--EEFMTELKIIGRTHHKNL 549
           K +G G+  KV   R IL    T  E+AVK ++K    ++  ++   E++I+   +H N+
Sbjct: 20  KTIGKGNFAKVKLARHIL----TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V+L      E    LV E    G + ++L   G+      R +    +   + Y H++  
Sbjct: 76  VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF- 133
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I+H D+K +N+LLD    D N   KI+DFG S        + D    G   Y APE  
Sbjct: 134 --IVHRDLKAENLLLD---ADMN--IKIADFGFSNEFTFG-NKLDA-FCGAPPYAAPELF 184
Query: 670 RNVPVT-TKVDVFSFGVMLLEIICG 693
           +       +VDV+S GV+L  ++ G
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGF------CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL          E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 23  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 78  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 136
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 137 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 180
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 181 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  +G+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 21  TIWEVPERYQNLSP-IGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 76  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 134
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 135 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDXELKILDFGLAR------ 178
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 179 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 28  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 82
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 83  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 141
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 142 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 185
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 186 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 28  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 82
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 83  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 141
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 142 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 185
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 186 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 511 LKDTQIEIAVKKLEKDIEKTNE---EFMTELKIIGRTHHKNLVRLLGFCSEEDKR----L 563
           L+D + ++AVK L  D+ +       F  E +     +H  +V +      E        
Sbjct: 34  LRDHR-DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY 92
Query: 564 LVYELMPNGTLSNFLFHEGQRPGWVQR-VEIALGVARGLLYLHEECETQIIHCDIKPQNV 622
           +V E +   TL + +  EG  P   +R +E+     + L + H+     IIH D+KP N+
Sbjct: 93  IVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 623 LLDLKTLDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDV 680
           L+      TN + K+ DFGI++ +  + +       + GT  Y++PE  R   V  + DV
Sbjct: 148 LISA----TNAV-KVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 681 FSFGVMLLEIICG 693
           +S G +L E++ G
Sbjct: 203 YSLGCVLYEVLTG 215

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 22  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 76
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 77  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 135
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 136 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 179
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 180 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 39  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 93
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 94  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 152
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 153 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 196
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 197 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 18  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 537 ELKIIGRTHHKNLVRLLGF------CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL          E +   LV  LM    L+N +  +      VQ 
Sbjct: 73  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 131
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 132 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 175
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 176 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 494 KLVGTGSSGKVY--RGILRLKDTQIEIAVKKLEKDIEKTN--EEFMTELKIIGRTHHKNL 549
           K +G G+  KV   R IL    T  E+AV+ ++K    ++  ++   E++I+   +H N+
Sbjct: 20  KTIGKGNFAKVKLARHIL----TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V+L      E    LV E    G + ++L   G+      R +    +   + Y H++  
Sbjct: 76  VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF- 133
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I+H D+K +N+LLD    D N   KI+DFG S          +    G+  Y APE  
Sbjct: 134 --IVHRDLKAENLLLD---ADMN--IKIADFGFSNEFTFGNKLDE--FCGSPPYAAPELF 184
Query: 670 RNVPVT-TKVDVFSFGVMLLEIICG 693
           +       +VDV+S GV+L  ++ G
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGF------CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL          E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 18  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 72
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 73  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 131
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 132 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 175
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 176 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 21  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 75
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 76  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 134
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 135 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 178
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 179 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 113/251 (45%), Gaps = 39/251 (15%)
Query: 460 GLIKRRNYFDPNSMEINFREF--TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ-- 515
           GL+ R ++          +E   T  E+ E  +  S  VG+G+ G V        DT+  
Sbjct: 13  GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTG 67
Query: 516 IEIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYE 567
           + +AVKKL +  +       T  EL+++    H+N++ LL   +      E +   LV  
Sbjct: 68  LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 127
Query: 568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLK 627
           LM    L+N +  +      VQ   +   + RGL Y+H      IIH D+KP N+     
Sbjct: 128 LM-GADLNNIVKCQKLTDDHVQF--LIYQILRGLKYIHS---ADIIHRDLKPSNL----- 176
Query: 628 TLDTNYMAKISDFGISKLLNKDQTRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSF 683
            ++ +   KI DFG+++        TD  M G   T  Y APE + N +     VD++S 
Sbjct: 177 AVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 229
Query: 684 GVMLLEIICGR 694
           G ++ E++ GR
Sbjct: 230 GCIMAELLTGR 240

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 15  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 69
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 70  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 128
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 129 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 172
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 173 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGF------CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL          E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 113/251 (45%), Gaps = 39/251 (15%)
Query: 460 GLIKRRNYFDPNSMEINFREF--TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ-- 515
           GL+ R ++          +E   T  E+ E  +  S  VG+G+ G V        DT+  
Sbjct: 12  GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTG 66
Query: 516 IEIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYE 567
           + +AVKKL +  +       T  EL+++    H+N++ LL   +      E +   LV  
Sbjct: 67  LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 126
Query: 568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLK 627
           LM    L+N +  +      VQ   +   + RGL Y+H      IIH D+KP N+     
Sbjct: 127 LM-GADLNNIVKCQKLTDDHVQF--LIYQILRGLKYIHS---ADIIHRDLKPSNL----- 175
Query: 628 TLDTNYMAKISDFGISKLLNKDQTRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSF 683
            ++ +   KI DFG+++        TD  M G   T  Y APE + N +     VD++S 
Sbjct: 176 AVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 228
Query: 684 GVMLLEIICGR 694
           G ++ E++ GR
Sbjct: 229 GCIMAELLTGR 239

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+   VY+G  +L D  + +   +LE + E      + E+ ++    H N+V L   
Sbjct: 10  LGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
              E    LV+E + +  L  +L   G              + RGL Y H +   +++H 
Sbjct: 69  IHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHR 124
Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE-WLRNVPV 674
           D+KPQN+L++ +        K++DFG+++      T+T  N   T+ Y  P+  L +   
Sbjct: 125 DLKPQNLLINERG-----ELKLADFGLAR-AKSIPTKTYDNEVVTLWYRPPDILLGSTDY 178
Query: 675 TTKVDVFSFGVMLLEIICGR 694
           +T++D++  G +  E+  GR
Sbjct: 179 STQIDMWGVGCIFYEMATGR 198

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      L   ++ +A+KK+     +T  +  + E+KI+ R  H+N++ +  
Sbjct: 36  IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 94  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 137
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 138 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTCDLKICDFGLARVADPDHDHTGFL 189
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 190 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      L   ++ +A+KK+     +T  +  + E+KI+ R  H+N++ +  
Sbjct: 37  IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 94
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 95  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 138
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 139 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTCDLKICDFGLARVADPDHDHTGFL 190
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 191 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      L   ++ +A+KK+     +T  +  + E+KI+ R  H+N++ +  
Sbjct: 28  IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 85
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 86  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 129
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 130 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTCDLKICDFGLARVADPDHDHTGFL 181
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 182 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      L   ++ +A+KK+     +T  +  + E+KI+ R  H+N++ +  
Sbjct: 35  IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 93  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 136
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTCDLKICDFGLARVADPDHDHTGFL 188
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      L   ++ +A+KK+     +T  +  + E+KI+ R  H+N++ +  
Sbjct: 29  IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 87  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 130
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 131 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTCDLKICDFGLARVADPDHDHTGFL 182
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 183 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 97/204 (47%), Gaps = 17/204 (8%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DI--EKTNEEFMTELKIIGRTHHKNL 549
            K +G G   +VYR    L    + +A+KK++  D+   K   + + E+ ++ + +H N+
Sbjct: 37  EKKIGRGQFSEVYRAACLLDG--VPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNV 94
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEI---ALGVARGLLYLHE 606
           ++      E+++  +V EL   G LS  + H  ++   +    +    + +   L ++H 
Sbjct: 95  IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS 154
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
               +++H DIKP NV      +    + K+ D G+ +  +  +T    ++ GT  Y++P
Sbjct: 155 R---RVMHRDIKPANVF-----ITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSP 205
Query: 667 EWLRNVPVTTKVDVFSFGVMLLEI 690
           E +       K D++S G +L E+
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEM 229

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      L   ++ +A+KK+     +T  +  + E+KI+ R  H+N++ +  
Sbjct: 29  IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 87  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 130
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 131 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTCDLKICDFGLARVADPDHDHTGFL 182
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 183 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 20/205 (9%)
Query: 494 KLVGTGSSGKVY--RGILRLKDTQIEIAVKKLEKDIEKTN--EEFMTELKIIGRTHHKNL 549
           K +G G+  KV   R IL    T  E+AVK ++K    ++  ++   E++I    +H N+
Sbjct: 20  KTIGKGNFAKVKLARHIL----TGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V+L      E    LV E    G + ++L   G+      R +    +   + Y H++  
Sbjct: 76  VKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF- 133
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I+H D+K +N+LLD    D N   KI+DFG S        + D    G   Y APE  
Sbjct: 134 --IVHRDLKAENLLLD---ADXN--IKIADFGFSNEFTFG-NKLDA-FCGAPPYAAPELF 184
Query: 670 RNVPVT-TKVDVFSFGVMLLEIICG 693
           +       +VDV+S GV+L  ++ G
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG 209

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 27  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 81
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 82  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 140
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 141 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 184
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 185 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 20/207 (9%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      L   ++ +A+KK+     +T  +  + E+KI+ R  H+N++ +  
Sbjct: 35  IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 555 FCS----EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
                  E+ K + + + +    L   L  + Q             + RGL Y+H     
Sbjct: 93  IIRAPTIEQMKDVYIVQDLMETDLYKLL--KCQHLSNDHICYFLYQILRGLKYIHS---A 147
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD--TNMRGTMGYVAPEW 668
            ++H D+KP N+L     L+T    KI DFG++++ + D   T   T    T  Y APE 
Sbjct: 148 NVLHRDLKPSNLL-----LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 669 LRNVPVTTK-VDVFSFGVMLLEIICGR 694
           + N    TK +D++S G +L E++  R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNE---EFMTELKIIGRTHHKN 548
             +++G G   +V+  + R      ++AVK L  D+ +       F  E +     +H  
Sbjct: 16  LGEILGFGGMSEVH--LARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 549 LVRLLGFCSEEDKR----LLVYELMPNGTLSNFLFHEGQRPGWVQR-VEIALGVARGLLY 603
           +V +      E        +V E +   TL + +  EG  P   +R +E+     + L +
Sbjct: 74  IVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNF 131
Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL-NKDQTRTDTN-MRGTM 661
            H+     IIH D+KP N+++      TN + K+ DFGI++ + +   + T T  + GT 
Sbjct: 132 SHQNG---IIHRDVKPANIMISA----TNAV-KVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
            Y++PE  R   V  + DV+S G +L E++ G
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 20/205 (9%)
Query: 494 KLVGTGSSGKVY--RGILRLKDTQIEIAVKKLEK-DIEKTN-EEFMTELKIIGRTHHKNL 549
           K +G G+  KV   R IL    T  E+A+K ++K  +  T+ ++   E++I+   +H N+
Sbjct: 18  KTIGKGNFAKVKLARHIL----TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V+L      E    L+ E    G + ++L   G+      R +    +   + Y H++  
Sbjct: 74  VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQK-- 130
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
            +I+H D+K +N+LLD    D N   KI+DFG S        + DT   G+  Y APE  
Sbjct: 131 -RIVHRDLKAENLLLD---ADMN--IKIADFGFSNEFTVG-GKLDT-FCGSPPYAAPELF 182
Query: 670 RNVPVT-TKVDVFSFGVMLLEIICG 693
           +       +VDV+S GV+L  ++ G
Sbjct: 183 QGKKYDGPEVDVWSLGVILYTLVSG 207

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQI--EIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+    +AVKKL +  +       T  
Sbjct: 12  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGHRVAVKKLSRPFQSIIHAKRTYR 66
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 67  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 125
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 126 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 169
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 170 -HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLV---- 550
           +G G+ G V      +   ++ +A+KK+     +T  +  + E+KI+ R  H+N++    
Sbjct: 51  IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 551 --RLLGFCSEEDKRLL-------VYELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
             R       +D  L+       +Y+L+    LSN     FL+                 
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQ---------------- 152
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 153 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTXDLKICDFGLARVADPDHDHTGFL 204
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 205 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQI--EIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+    +AVKKL +  +       T  
Sbjct: 12  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGHRVAVKKLSRPFQSIIHAKRTYR 66
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 67  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 125
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 126 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 169
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 170 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKL-----EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           +G G+ G VY+   R   +   +A+K +     E+ +  +    +  L+ +    H N+V
Sbjct: 12  IGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 551 RLLGFCS-----EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV--EIALGVARGLLY 603
           RL+  C+      E K  LV+E + +  L  +L  +   PG       ++     RGL +
Sbjct: 70  RLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           LH  C   I+H D+KP+N+L+      +    K++DFG++++ +         +  T+ Y
Sbjct: 128 LHANC---IVHRDLKPENILVT-----SGGTVKLADFGLARIYSYQMALAPVVV--TLWY 177
Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            APE L      T VD++S G +  E+ 
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMF 205

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 54/224 (24%)
Query: 496 VGTGSSGKV---YRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVR 551
           +G G+ G V   Y  +      ++ +A+KK+     +T  +  + E+KI+ R  H+N++ 
Sbjct: 31  IGEGAYGMVCSAYDNV-----NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 552 LLGFCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEI 593
           +         E+ K + +         Y+L+    LSN     FL+              
Sbjct: 86  INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ------------- 132
Query: 594 ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT 653
              + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T
Sbjct: 133 ---ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTXDLKIXDFGLARVADPDHDHT 181
Query: 654 D--TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
              T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 45/232 (19%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKV---YRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT- 536
           T  E+ +  +G  + VG+G+ G V   Y   LR K     +AVKKL +  +       T 
Sbjct: 22  TVWEVPQRLQGL-RPVGSGAYGSVCSAYDARLRQK-----VAVKKLSRPFQSLIHARRTY 75
Query: 537 -ELKIIGRTHHKNLVRLLGF----CSEED--KRLLVYELMPNGTLSNFLFHEGQRPGWVQ 589
            EL+++    H+N++ LL       S ED  +  LV  LM    L+N +  +      VQ
Sbjct: 76  RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKSQALSDEHVQ 134
Query: 590 RVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
              +   + RGL Y+H      IIH D+KP NV      ++ +   +I DFG+++  +++
Sbjct: 135 F--LVYQLLRGLKYIHS---AGIIHRDLKPSNV-----AVNEDSELRILDFGLARQADEE 184
Query: 650 QTRTDTNMRGTMGYVAPEWLRNVPV-------TTKVDVFSFGVMLLEIICGR 694
            T          GYVA  W R   +          VD++S G ++ E++ G+
Sbjct: 185 MT----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 24/213 (11%)
Query: 492 FSKLVGTGSSGKVYRGILR-LKDTQIEIAVKKLEKDIEKTNE---EFMTELKIIGRTHHK 547
             +++G G   +V+  + R L+D + ++AVK L  D+ +       F  E +     +H 
Sbjct: 16  LGEILGFGGMSEVH--LARDLRDHR-DVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 548 NLVRLLGFCSEEDKR----LLVYELMPNGTLSNFLFHEGQRPGWVQR-VEIALGVARGLL 602
            +V +      E        +V E +   TL + +  EG  P   +R +E+     + L 
Sbjct: 73  AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALN 130
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL-NKDQTRTDTN-MRGT 660
           + H+     IIH D+KP N+++      TN + K+ DFGI++ + +   + T T  + GT
Sbjct: 131 FSHQNG---IIHRDVKPANIMISA----TNAV-KVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
             Y++PE  R   V  + DV+S G +L E++ G
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      +   ++ +A+KK+     +T  +  + E+KI+ R  H+N++ +  
Sbjct: 31  IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 89  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 132
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTXDLKICDFGLARVADPDHDHTGFL 184
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQI--EIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+    +AVKKL +  +       T  
Sbjct: 22  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGHRVAVKKLSRPFQSIIHAKRTYR 76
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 77  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 135
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 136 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 179
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 180 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQI--EIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+    +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 24/213 (11%)
Query: 492 FSKLVGTGSSGKVYRGILR-LKDTQIEIAVKKLEKDIEKTNE---EFMTELKIIGRTHHK 547
             +++G G   +V+  + R L+D + ++AVK L  D+ +       F  E +     +H 
Sbjct: 16  LGEILGFGGMSEVH--LARDLRDHR-DVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 548 NLVRLLGFCSEEDKR----LLVYELMPNGTLSNFLFHEGQRPGWVQR-VEIALGVARGLL 602
            +V +      E        +V E +   TL + +  EG  P   +R +E+     + L 
Sbjct: 73  AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALN 130
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL-NKDQTRTDTN-MRGT 660
           + H+     IIH D+KP N+++      TN + K+ DFGI++ + +   + T T  + GT
Sbjct: 131 FSHQNG---IIHRDVKPANIMISA----TNAV-KVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
             Y++PE  R   V  + DV+S G +L E++ G
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 111/251 (44%), Gaps = 39/251 (15%)
Query: 460 GLIKRRNYFDPNSMEINFREF--TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQI- 516
           GL+ R ++          +E   T  E+ E  +  S  VG+G+ G V        DT+  
Sbjct: 13  GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTG 67
Query: 517 -EIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKNLVRLLGF------CSEEDKRLLVYE 567
             +AVKKL +  +       T  EL+++    H+N++ LL          E +   LV  
Sbjct: 68  HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 127
Query: 568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLK 627
           LM    L+N +  +      VQ   +   + RGL Y+H      IIH D+KP N+     
Sbjct: 128 LM-GADLNNIVKCQKLTDDHVQF--LIYQILRGLKYIHS---ADIIHRDLKPSNL----- 176
Query: 628 TLDTNYMAKISDFGISKLLNKDQTRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSF 683
            ++ +   KI DFG+++        TD  M G   T  Y APE + N +     VD++S 
Sbjct: 177 AVNEDCELKILDFGLAR-------HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSV 229
Query: 684 GVMLLEIICGR 694
           G ++ E++ GR
Sbjct: 230 GCIMAELLTGR 240

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 36/238 (15%)
Query: 478 REFTFQELQEATKGFSKLVGTGSSGKVYRGIL----RLKDTQIEIAVKKLEKDIE-KTNE 532
           ++   +E+  +   F + +G    GKVY+G L      + TQ  +A+K L+   E    E
Sbjct: 16  KQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQ-AVAIKTLKDKAEGPLRE 74
Query: 533 EFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEG---------- 582
           EF  E  +  R  H N+V LLG  +++    +++    +G L  FL              
Sbjct: 75  EFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 134
Query: 583 --------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM 634
                   + P +V  V     +A G+ YL       ++H D+  +NVL+  K       
Sbjct: 135 DRTVKSALEPPDFVHLVA---QIAAGMEYLSSH---HVVHKDLATRNVLVYDKL-----N 183
Query: 635 AKISDFGI-SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            KISD G+  ++   D  +   N    + ++APE +     +   D++S+GV+L E+ 
Sbjct: 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 241

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQI--EIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+    +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      +   ++ +A+KK+     +T  +  + E+KI+ R  H+N++ +  
Sbjct: 31  IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 89  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 132
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTXDLKICDFGLARVADPDHDHTGFL 184
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQI--EIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+    +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 8/204 (3%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIA---VKKLEKDIEKTNEEFMTELKIIGRTHHKNLV 550
           +++G G    V R I R    Q  +    V K       + E+   E  I     H ++V
Sbjct: 32  EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC-E 609
            LL   S +    +V+E M    L  F   +    G+V    +A    R +L     C +
Sbjct: 92  ELLETYSSDGMLYMVFEFMDGADLC-FEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 150
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             IIH D+KP  VLL  K  + +   K+  FG++  L +        + GT  ++APE +
Sbjct: 151 NNIIHRDVKPHCVLLASK--ENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFMAPEVV 207
Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
           +  P    VDV+  GV+L  ++ G
Sbjct: 208 KREPYGKPVDVWGCGVILFILLSG 231

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 11/199 (5%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G+VY+ I  + +  + I   +LE + E      + E+ ++    H+N++ L   
Sbjct: 42  LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV--EIALGVARGLLYLHEECETQII 613
                +  L++E   N  L  ++    + P    RV       +  G+ + H     + +
Sbjct: 102 IHHNHRLHLIFEYAEND-LKKYM---DKNPDVSMRVIKSFLYQLINGVNFCHSR---RCL 154
Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE-WLRNV 672
           H D+KPQN+LL +       + KI DFG+++       R  T+   T+ Y  PE  L + 
Sbjct: 155 HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI-PIRQFTHEIITLWYRPPEILLGSR 213
Query: 673 PVTTKVDVFSFGVMLLEII 691
             +T VD++S   +  E++
Sbjct: 214 HYSTSVDIWSIACIWAEML 232

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 25/221 (11%)
Query: 486 QEATKGFSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKDIEKTN--EEFMTELKIIG 542
           Q+ T G  +++G G  G V    L+ +D + +++AVK L+ DI  ++  EEF+ E   + 
Sbjct: 23  QQFTLG--RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMK 80
Query: 543 RTHHKNLVRLLGFC--SEEDKRL----LVYELMPNGTLSNFLFHE--GQRP---GWVQRV 591
              H ++ +L+G    S    RL    ++   M +G L  FL     G+ P        V
Sbjct: 81  EFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLV 140
Query: 592 EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS-KLLNKDQ 650
              + +A G+ YL        IH D+  +N +L       +    ++DFG+S K+ + D 
Sbjct: 141 RFMVDIACGMEYLSSR---NFIHRDLAARNCMLA-----EDMTVCVADFGLSRKIYSGDY 192
Query: 651 TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            R     +  + ++A E L +   T   DV++FGV + EI+
Sbjct: 193 YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIM 233

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 112/251 (44%), Gaps = 39/251 (15%)
Query: 460 GLIKRRNYFDPNSMEINFREF--TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQI- 516
           GL+ R ++          +E   T  E+ E  +  S  VG+G+ G V        DT+  
Sbjct: 13  GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTG 67
Query: 517 -EIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYE 567
             +AVKKL +  +       T  EL+++    H+N++ LL   +      E +   LV  
Sbjct: 68  HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 127
Query: 568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLK 627
           LM    L+N +  +      VQ   +   + RGL Y+H      IIH D+KP N+     
Sbjct: 128 LM-GADLNNIVKCQKLTDDHVQF--LIYQILRGLKYIHS---ADIIHRDLKPSNL----- 176
Query: 628 TLDTNYMAKISDFGISKLLNKDQTRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSF 683
            ++ +   KI DFG+++        TD  M G   T  Y APE + N +     VD++S 
Sbjct: 177 AVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 229
Query: 684 GVMLLEIICGR 694
           G ++ E++ GR
Sbjct: 230 GCIMAELLTGR 240

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 517 EIAVKKLEKDIEKTNE---EFMTELKIIGRTHHKNLVRLLGFCSEEDKR----LLVYELM 569
           ++AVK L  D+ +       F  E +     +H  +V +      E        +V E +
Sbjct: 39  DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 570 PNGTLSNFLFHEGQRPGWVQR-VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKT 628
              TL + +  EG  P   +R +E+     + L + H+     IIH D+KP N+++    
Sbjct: 99  DGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISA-- 151
Query: 629 LDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVM 686
             TN + K+ DFGI++ +  + +       + GT  Y++PE  R   V  + DV+S G +
Sbjct: 152 --TNAV-KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 687 LLEIICG 693
           L E++ G
Sbjct: 209 LYEVLTG 215

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 112/251 (44%), Gaps = 39/251 (15%)
Query: 460 GLIKRRNYFDPNSMEINFREF--TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQI- 516
           GL+ R ++          +E   T  E+ E  +  S  VG+G+ G V        DT+  
Sbjct: 12  GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTG 66
Query: 517 -EIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYE 567
             +AVKKL +  +       T  EL+++    H+N++ LL   +      E +   LV  
Sbjct: 67  HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 126
Query: 568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLK 627
           LM    L+N +  +      VQ   +   + RGL Y+H      IIH D+KP N+     
Sbjct: 127 LM-GADLNNIVKCQKLTDDHVQF--LIYQILRGLKYIHS---ADIIHRDLKPSNL----- 175
Query: 628 TLDTNYMAKISDFGISKLLNKDQTRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSF 683
            ++ +   KI DFG+++        TD  M G   T  Y APE + N +     VD++S 
Sbjct: 176 AVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 228
Query: 684 GVMLLEIICGR 694
           G ++ E++ GR
Sbjct: 229 GCIMAELLTGR 239

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 11/201 (5%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           K +G GS   + R  +  K  Q   AVK + K +E   ++ +T LK+     H N+V+L 
Sbjct: 17  KPLGEGSFS-ICRKCVHKKSNQA-FAVKIISKRMEANTQKEITALKLC--EGHPNIVKLH 72
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
               ++    LV EL+  G L    F   ++       E +  + + +  +    +  ++
Sbjct: 73  EVFHDQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVV 128
Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP 673
           H D+KP+N+L   +  + N   KI DFG ++L   D     T    T+ Y APE L    
Sbjct: 129 HRDLKPENLLFTDE--NDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHYAAPELLNQNG 185
Query: 674 VTTKVDVFSFGVMLLEIICGR 694
                D++S GV+L  ++ G+
Sbjct: 186 YDESCDLWSLGVILYTMLSGQ 206

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF--MTELKIIGRTHHKNLV 550
            ++ G G+ G V  G  + K T + +A+KK+ +D    N E   M +L ++   HH N+V
Sbjct: 28  ERMAGQGTFGTVQLG--KEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL---HHPNIV 82
Query: 551 RLLGF---CSEEDKRLL----VYELMPNG---TLSNFLFHEGQRPGWVQRVEIALGVARG 600
           +L  +     E D+R +    V E +P+       N+   +   P  + +V     + R 
Sbjct: 83  QLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV-FLFQLIRS 141
Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
           +  LH      + H DIKP NVL++    + +   K+ DFG +K L+  +   +     +
Sbjct: 142 IGCLHLP-SVNVCHRDIKPHNVLVN----EADGTLKLCDFGSAKKLSPSE--PNVAYICS 194
Query: 661 MGYVAPEWL-RNVPVTTKVDVFSFGVMLLEIICG 693
             Y APE +  N   TT VD++S G +  E++ G
Sbjct: 195 RYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      L   ++ +A++K+     +T  +  + E+KI+ R  H+N++ +  
Sbjct: 35  IGEGAYGMVCSAYDNL--NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 93  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 136
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTCDLKICDFGLARVADPDHDHTGFL 188
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKL-----EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           +G G+ G VY+   R   +   +A+K +     E+ +  +    +  L+ +    H N+V
Sbjct: 12  IGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 551 RLLGFCS-----EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV--EIALGVARGLLY 603
           RL+  C+      E K  LV+E + +  L  +L  +   PG       ++     RGL +
Sbjct: 70  RLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           LH  C   I+H D+KP+N+L+      +    K++DFG++++ +         +  T+ Y
Sbjct: 128 LHANC---IVHRDLKPENILVT-----SGGTVKLADFGLARIYSYQMALDPVVV--TLWY 177
Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            APE L      T VD++S G +  E+ 
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMF 205

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI D+G+++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDYGLAR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 8/213 (3%)
Query: 485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK---TNEEFMTELKII 541
           L E      +++G G    V R I R    Q  + +  + K       + E+   E  I 
Sbjct: 21  LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80
Query: 542 GRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
               H ++V LL   S +    +V+E M    L  F   +    G+V    +A    R +
Sbjct: 81  HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLC-FEIVKRADAGFVYSEAVASHYMRQI 139
Query: 602 LYLHEEC-ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
           L     C +  IIH D+KP  VLL  K  + +   K+  FG++  L +        + GT
Sbjct: 140 LEALRYCHDNNIIHRDVKPHCVLLASK--ENSAPVKLGGFGVAIQLGESGLVAGGRV-GT 196
Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
             ++APE ++  P    VDV+  GV+L  ++ G
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      +   ++ +A+KK+     +T  +  + E+KI+ R  H+N++ +  
Sbjct: 31  IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 89  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 132
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTCDLKICDFGLARVADPDHDHTGFL 184
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      +   ++ +A+KK+     +T  +  + E+KI+ R  H+N++ +  
Sbjct: 33  IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 90
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 91  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 134
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTCDLKICDFGLARVADPDHDHTGFL 186
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 187 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 24/172 (13%)
Query: 532 EEFMTELKIIGRTHHKNLVRLLGFCSE--EDKRLLVYELMPNGTLSNFL----FHEGQRP 585
           E+   E+ I+ +  H N+V+L+    +  ED   +V+EL+  G +          E Q  
Sbjct: 81  EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140
Query: 586 GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
            + Q       + +G+ YLH +   +IIH DIKP N+L     +  +   KI+DFG+S  
Sbjct: 141 FYFQ------DLIKGIEYLHYQ---KIIHRDIKPSNLL-----VGEDGHIKIADFGVSNE 186
Query: 646 LNKDQTRTDTNMRGTMGYVAPEWL---RNVPVTTKVDVFSFGVMLLEIICGR 694
             K      +N  GT  ++APE L   R +     +DV++ GV L   + G+
Sbjct: 187 F-KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 101/234 (43%), Gaps = 36/234 (15%)
Query: 482 FQELQEATKGFSKLVGTGSSGKVYRGIL----RLKDTQIEIAVKKLEKDIE-KTNEEFMT 536
            +E+  +   F + +G    GKVY+G L      + TQ  +A+K L+   E    EEF  
Sbjct: 3   LKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQ-AVAIKTLKDKAEGPLREEFRH 61
Query: 537 ELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEG-------------- 582
           E  +  R  H N+V LLG  +++    +++    +G L  FL                  
Sbjct: 62  EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 583 ----QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS 638
               + P +V  V     +A G+ YL       ++H D+  +NVL+  K        KIS
Sbjct: 122 KSALEPPDFVHLVA---QIAAGMEYLSSH---HVVHKDLATRNVLVYDKL-----NVKIS 170
Query: 639 DFGI-SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           D G+  ++   D  +   N    + ++APE +     +   D++S+GV+L E+ 
Sbjct: 171 DLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 224

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      +   ++ +A+KK+     +T  +  + E+KI+ R  H+N++ +  
Sbjct: 51  IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 152
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 153 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTCDLKICDFGLARVADPDHDHTGFL 204
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 205 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 496 VGTGSSGKVYRG-------ILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKN 548
           +G G+ G VY+         + LK  ++             T  E +  L+ +    H N
Sbjct: 17  IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVRE-VALLRRLEAFEHPN 75
Query: 549 LVRLLGFCS-----EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV--EIALGVARGL 601
           +VRL+  C+      E K  LV+E + +  L  +L  +   PG       ++     RGL
Sbjct: 76  VVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMRQFLRGL 133
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            +LH  C   I+H D+KP+N+L+      +    K++DFG++++ +     T   +  T+
Sbjct: 134 DFLHANC---IVHRDLKPENILVT-----SGGTVKLADFGLARIYSYQMALTPVVV--TL 183
Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            Y APE L      T VD++S G +  E+ 
Sbjct: 184 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTIGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E MP G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYMPGGDMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ K++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-KVADFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      +   ++ +A+KK+     +T  +  + E+KI+ R  H+N++ +  
Sbjct: 39  IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 96
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 97  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 140
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 141 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTCDLKICDFGLARVADPDHDHTGFL 192
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 193 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      +   ++ +A+KK+     +T  +  + E+KI+ R  H+N++ +  
Sbjct: 31  IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 89  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 132
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTCDLKICDFGLARVADPDHDHTGFL 184
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 185 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTIGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E MP G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYMPGGDMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ K++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-KVADFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNE---EFMTELKIIGRTHHKN 548
             +++G G   +V+  + R      ++AVK L  D+ +       F  E +     +H  
Sbjct: 33  LGEILGFGGMSEVH--LARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 90
Query: 549 LVRLLGFCSEEDKR----LLVYELMPNGTLSNFLFHEGQRPGWVQR-VEIALGVARGLLY 603
           +V +      E        +V E +   TL + +  EG  P   +R +E+     + L +
Sbjct: 91  IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNF 148
Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTM 661
            H+     IIH D+KP N+++      TN + K+ DFGI++ +  + +       + GT 
Sbjct: 149 SHQNG---IIHRDVKPANIMISA----TNAV-KVMDFGIARAIADSGNSVTQTAAVIGTA 200
Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
            Y++PE  R   V  + DV+S G +L E++ G
Sbjct: 201 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKL-----EKDIEKTNEEFMTELKIIGRTHHKNLV 550
           +G G+ G VY+   R   +   +A+K +     E+ +  +    +  L+ +    H N+V
Sbjct: 12  IGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 551 RLLGFCS-----EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV--EIALGVARGLLY 603
           RL+  C+      E K  LV+E + +  L  +L  +   PG       ++     RGL +
Sbjct: 70  RLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           LH  C   I+H D+KP+N+L+      +    K++DFG++++ +         +  T+ Y
Sbjct: 128 LHANC---IVHRDLKPENILVT-----SGGTVKLADFGLARIYSYQMALFPVVV--TLWY 177
Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEII 691
            APE L      T VD++S G +  E+ 
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMF 205

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 51/233 (21%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKL------EKDIEKTNEEFMTELKIIGRTHHK 547
           K +G G+ G V++ I R   T   +AVKK+        D ++T  E M   ++ G   H+
Sbjct: 15  KKLGKGAYGIVWKSIDR--RTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG---HE 69
Query: 548 NLVRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVE---IALGVARGLL 602
           N+V LL     ++ R   LV++ M          H   R   ++ V    +   + + + 
Sbjct: 70  NIVNLLNVLRADNDRDVYLVFDYMETD------LHAVIRANILEPVHKQYVVYQLIKVIK 123
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL--------------LNK 648
           YLH      ++H D+KP N+LL+ +        K++DFG+S+               +N+
Sbjct: 124 YLHS---GGLLHRDMKPSNILLNAEC-----HVKVADFGLSRSFVNIRRVTNNIPLSINE 175
Query: 649 DQTRTDTNMRGTMGYVAPEWLR-------NVPVTTKVDVFSFGVMLLEIICGR 694
           +    D +      YVA  W R       +   T  +D++S G +L EI+CG+
Sbjct: 176 NTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQI--EIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+    +AVKKL +  +       T  
Sbjct: 12  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGHRVAVKKLSRPFQSIIHAKRTYR 66
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +         VQ 
Sbjct: 67  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCAKLTDDHVQF 125
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 126 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 169
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 170 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 17/201 (8%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS  +  R +   K T +E AVK ++K     +EE    L+      H N++ L   
Sbjct: 35  IGVGSYSECKRCVH--KATNMEYAVKVIDKSKRDPSEEIEILLRY---GQHPNIITLKDV 89
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLHEECETQI 612
             +     LV ELM  G L + +     R  +    E +     + + + YLH +    +
Sbjct: 90  YDDGKHVYLVTELMRGGELLDKIL----RQKFFSEREASFVLHTIGKTVEYLHSQG---V 142
Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV 672
           +H D+KP N+L   ++ +   + +I DFG +K L  +     T    T  +VAPE L+  
Sbjct: 143 VHRDLKPSNILYVDESGNPECL-RICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQ 200
Query: 673 PVTTKVDVFSFGVMLLEIICG 693
                 D++S G++L  ++ G
Sbjct: 201 GYDEGCDIWSLGILLYTMLAG 221

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 45/232 (19%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKV---YRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT- 536
           T  E+ +  +G  + VG+G+ G V   Y   LR K     +AVKKL +  +       T 
Sbjct: 22  TVWEVPQRLQGL-RPVGSGAYGSVCSAYDARLRQK-----VAVKKLSRPFQSLIHARRTY 75
Query: 537 -ELKIIGRTHHKNLVRLLGF----CSEED--KRLLVYELMPNGTLSNFLFHEGQRPGWVQ 589
            EL+++    H+N++ LL       S ED  +  LV  LM    L+N +  +      VQ
Sbjct: 76  RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSDEHVQ 134
Query: 590 RVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
              +   + RGL Y+H      IIH D+KP NV      ++ +   +I DFG+++  +++
Sbjct: 135 F--LVYQLLRGLKYIHS---AGIIHRDLKPSNV-----AVNEDSELRILDFGLARQADEE 184
Query: 650 QTRTDTNMRGTMGYVAPEWLRNVPV-------TTKVDVFSFGVMLLEIICGR 694
            T          GYVA  W R   +          VD++S G ++ E++ G+
Sbjct: 185 MT----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 36/213 (16%)
Query: 496 VGTGSSGKVYRGILRLKDTQI--EIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKNLVR 551
           VG+G+ G V        DT+    +AVKKL +  +       T  EL+++    H+N++ 
Sbjct: 40  VGSGAYGSVCAAF----DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 95
Query: 552 LLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
           LL   +      E +   LV  LM    L+N +  +      VQ   +   + RGL Y+H
Sbjct: 96  LLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF--LIYQILRGLKYIH 152
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG---TMG 662
                 IIH D+KP N+      ++ +   KI DFG+++        TD  M G   T  
Sbjct: 153 S---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR-------HTDDEMTGYVATRW 197
Query: 663 YVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
           Y APE + N +     VD++S G ++ E++ GR
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        D +  ++IAVKKL +  +       T  
Sbjct: 45  TIWEVPERYQTLSP-VGSGAYGSVCSSY----DVKSGLKIAVKKLSRPFQSIIHAKRTYR 99
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 158
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++      
Sbjct: 159 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLAR------ 202
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 203 -HTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 43/231 (18%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 23  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 78  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 136
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++    + 
Sbjct: 137 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLARHTADEM 186
Query: 651 TRTDTNMRGTMGYVAPEWLRNVPV-------TTKVDVFSFGVMLLEIICGR 694
           T          GYVA  W R   +          VD++S G ++ E++ GR
Sbjct: 187 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 45/232 (19%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKV---YRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT- 536
           T  E+ +  +G  + VG+G+ G V   Y   LR K     +AVKKL +  +       T 
Sbjct: 14  TVWEVPQRLQGL-RPVGSGAYGSVCSAYDARLRQK-----VAVKKLSRPFQSLIHARRTY 67
Query: 537 -ELKIIGRTHHKNLVRLLGF----CSEED--KRLLVYELMPNGTLSNFLFHEGQRPGWVQ 589
            EL+++    H+N++ LL       S ED  +  LV  LM    L+N +  +      VQ
Sbjct: 68  RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSDEHVQ 126
Query: 590 RVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
              +   + RGL Y+H      IIH D+KP NV      ++ +   +I DFG+++  +++
Sbjct: 127 F--LVYQLLRGLKYIHS---AGIIHRDLKPSNV-----AVNEDCELRILDFGLARQADEE 176
Query: 650 QTRTDTNMRGTMGYVAPEWLRNVPV-------TTKVDVFSFGVMLLEIICGR 694
            T          GYVA  W R   +          VD++S G ++ E++ G+
Sbjct: 177 MT----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      L   ++ +A+KK+     +T  +  + E+KI+ R  H+N++ +  
Sbjct: 35  IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 93  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 136
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTCDLKICDFGLARVADPDHDHTGFL 188
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
                T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 189 XEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      L   ++ +A+KK+     +T  +  + E+KI+ R  H+N++ +  
Sbjct: 36  IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 94  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 137
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 138 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTCDLKICDFGLARVADPDHDHTGFL 189
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
                T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 190 XEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 43/231 (18%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 23  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 78  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 136
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++    + 
Sbjct: 137 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLARHTADEM 186
Query: 651 TRTDTNMRGTMGYVAPEWLRNVPV-------TTKVDVFSFGVMLLEIICGR 694
           T          GYVA  W R   +          VD++S G ++ E++ GR
Sbjct: 187 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 43/231 (18%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 23  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 77
Query: 537 ELKIIGRTHHKNLVRLLGF------CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL          E +   LV  LM    L+N +  +      VQ 
Sbjct: 78  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 136
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++    + 
Sbjct: 137 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFGLARHTADEM 186
Query: 651 TRTDTNMRGTMGYVAPEWLRNVPV-------TTKVDVFSFGVMLLEIICGR 694
           T          GYVA  W R   +          VD++S G ++ E++ GR
Sbjct: 187 T----------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 17/201 (8%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS  +  R +   K T +E AVK ++K     +EE    L+      H N++ L   
Sbjct: 35  IGVGSYSECKRCVH--KATNMEYAVKVIDKSKRDPSEEIEILLRY---GQHPNIITLKDV 89
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLHEECETQI 612
             +     LV ELM  G L + +     R  +    E +     + + + YLH +    +
Sbjct: 90  YDDGKHVYLVTELMRGGELLDKIL----RQKFFSEREASFVLHTIGKTVEYLHSQG---V 142
Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV 672
           +H D+KP N+L   ++ +   + +I DFG +K L  +     T    T  +VAPE L+  
Sbjct: 143 VHRDLKPSNILYVDESGNPECL-RICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQ 200
Query: 673 PVTTKVDVFSFGVMLLEIICG 693
                 D++S G++L  ++ G
Sbjct: 201 GYDEGCDIWSLGILLYTMLAG 221

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 494 KLVGTGSSGKVY--RGILRLKDTQIEIAVKKLEK-DIEKTN-EEFMTELKIIGRTHHKNL 549
           K +G G+  KV   R IL    T  E+A+K ++K  +  T+ ++   E++I+   +H N+
Sbjct: 21  KTIGKGNFAKVKLARHIL----TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V+L      E    L+ E    G + ++L   G+      R +    +   + Y H++  
Sbjct: 77  VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQK-- 133
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
            +I+H D+K +N+LLD    D N   KI+DFG S        + D    G   Y APE  
Sbjct: 134 -RIVHRDLKAENLLLD---ADMN--IKIADFGFSNEFTVG-GKLDA-FCGAPPYAAPELF 185
Query: 670 RNVPVT-TKVDVFSFGVMLLEIICG 693
           +       +VDV+S GV+L  ++ G
Sbjct: 186 QGKKYDGPEVDVWSLGVILYTLVSG 210

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 112/276 (40%), Gaps = 44/276 (15%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKTNEEFMTELKIIGRTHHKNLV 550
            S ++G G++  V+RG  R K T    A+K        +  +  M E +++ + +HKN+V
Sbjct: 13  LSDILGQGATANVFRG--RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 551 RLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHE 606
           +L     E   R  +L+ E  P G+L   L       G  +   + +   V  G+ +L  
Sbjct: 71  KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR- 129
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
             E  I+H +IKP N++  +   D   + K++DFG ++ L  D+      + GT  Y+ P
Sbjct: 130 --ENGIVHRNIKPGNIMRVIGE-DGQSVYKLTDFGAARELEDDEQF--VXLYGTEEYLHP 184
Query: 667 EWLRNVPVT--------TKVDVFSFGV-----------------------MLLEIICGRR 695
           +      +           VD++S GV                       ++ +II G+ 
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244
Query: 696 HXXXXXXXXXXXXXXXXXXXWVISCMLSRNLQVLVS 731
                                 +SC LSR LQVL++
Sbjct: 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLT 280

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 48/223 (21%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLV-- 550
           + +G G+ G V      ++ T++  A+KK+     +T  +  + E++I+ R  H+N++  
Sbjct: 49  QYIGEGAYGMVSSAYDHVRKTRV--AIKKISPFEHQTYCQRTLREIQILLRFRHENVIGI 106
Query: 551 -RLLGFCSEEDKRLL----------VYELMPNGTLSN-----FLFHEGQRPGWVQRVEIA 594
             +L   + E  R +          +Y+L+ +  LSN     FL+               
Sbjct: 107 RDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQ-------------- 152
Query: 595 LGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD 654
             + RGL Y+H      ++H D+KP N+L     ++T    KI DFG++++ + +   T 
Sbjct: 153 --ILRGLKYIHS---ANVLHRDLKPSNLL-----INTTCDLKICDFGLARIADPEHDHTG 202
Query: 655 --TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
             T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 203 FLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K+T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +P G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEYSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K+T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +P G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEYSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K+T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +P G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEYSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +G G+ G V     RL   Q+  A+KK+    D+    +  + ELKI+    H N++ + 
Sbjct: 63  IGNGAYGVVSSARRRLTGQQV--AIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 120
Query: 554 GFC------SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHE 606
                     E     +V +LM +    + + H  Q P  ++ V   L  + RGL Y+H 
Sbjct: 121 DILRPTVPYGEFKSVYVVLDLMESDL--HQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH- 176
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD---TNMRGTMGY 663
               Q+IH D+KP N+L     ++ N   KI DFG+++ L           T    T  Y
Sbjct: 177 --SAQVIHRDLKPSNLL-----VNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWY 229
Query: 664 VAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRR 695
            APE + ++   T  +D++S G +  E++  R+
Sbjct: 230 RAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K+T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 68  KTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +P G + + L    +R G           A+ +L   YLH  
Sbjct: 126 KLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 180
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 181 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 229
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K+T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 48  KTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E  P G + + L    +R G           A+ +L   YLH  
Sbjct: 106 KLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 160
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+++D       Y+ K++DFG +K +   + RT   + GT  Y+APE
Sbjct: 161 --LDLIYRDLKPENLMID----QQGYI-KVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 209
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 102/249 (40%), Gaps = 61/249 (24%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTN----EEFMTELKIIGRTHHKNLV 550
           +G GS G V   I     T+   A+K + K+ I + N    E   TE++++ + HH N+ 
Sbjct: 34  IGQGSYGVVRVAIE--NQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIA 91
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFL-------------------------------- 578
           RL     +E    LV EL   G L + L                                
Sbjct: 92  RLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAIN 151
Query: 579 -----FHEGQRPGWVQRVEIALGVAR----GLLYLHEECETQIIHCDIKPQNVLLDLKTL 629
                F E     +VQR ++   + R     L YLH +    I H DIKP+N L    + 
Sbjct: 152 GSIHGFRESL--DFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLF---ST 203
Query: 630 DTNYMAKISDFGISK---LLNKDQTRTDTNMRGTMGYVAPEWLR--NVPVTTKVDVFSFG 684
           + ++  K+ DFG+SK    LN  +    T   GT  +VAPE L   N     K D +S G
Sbjct: 204 NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG 263
Query: 685 VMLLEIICG 693
           V+L  ++ G
Sbjct: 264 VLLHLLLMG 272

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K+T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 48  KTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +P G + + L    +R G           A+ +L   YLH  
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 160
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 161 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 209
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K+T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 48  KTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +P G + + L    +R G           A+ +L   YLH  
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 160
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 161 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 209
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K+T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 40  KTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 97
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +P G +    F   +R G           A+ +L   YLH  
Sbjct: 98  KLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS- 152
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 153 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 201
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAG 227

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKK-LEKDIEKTNEEF-MTELKIIGRTHHKNLVRLL 553
           +G GS G V++   R +DT   +A+KK LE + +   ++  + E++++ +  H NLV LL
Sbjct: 11  IGEGSYGVVFK--CRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLL 68
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
                + +  LV+E   +  L     ++   P  + +  I     + + + H+      I
Sbjct: 69  EVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK-SITWQTLQAVNFCHKH---NCI 124
Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR-NV 672
           H D+KP+N+L     +  + + K+ DFG ++LL       D  +  T  Y +PE L  + 
Sbjct: 125 HRDVKPENIL-----ITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPELLVGDT 178
Query: 673 PVTTKVDVFSFGVMLLEIICG 693
                VDV++ G +  E++ G
Sbjct: 179 QYGPPVDVWAIGCVFAELLSG 199

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K+T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 48  KTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +P G + + L    +R G           A+ +L   YLH  
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 160
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 161 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 209
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K+T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 40  KTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 97
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +P G +    F   +R G           A+ +L   YLH  
Sbjct: 98  KLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQIVLTFEYLHS- 152
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 153 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 201
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAG 227

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 113/276 (40%), Gaps = 44/276 (15%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKTNEEFMTELKIIGRTHHKNLV 550
            S ++G G++  V+RG  R K T    A+K        +  +  M E +++ + +HKN+V
Sbjct: 13  LSDILGQGATANVFRG--RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 551 RLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHE 606
           +L     E   R  +L+ E  P G+L   L       G  +   + +   V  G+ +L  
Sbjct: 71  KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR- 129
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
             E  I+H +IKP N++  +   D   + K++DFG ++ L  D+     ++ GT  Y+ P
Sbjct: 130 --ENGIVHRNIKPGNIMRVIGE-DGQSVYKLTDFGAARELEDDEQF--VSLYGTEEYLHP 184
Query: 667 EWLRNVPVT--------TKVDVFSFGV-----------------------MLLEIICGRR 695
           +      +           VD++S GV                       ++ +II G+ 
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244
Query: 696 HXXXXXXXXXXXXXXXXXXXWVISCMLSRNLQVLVS 731
                                 +SC LSR LQVL++
Sbjct: 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLT 280

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI  FG+++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILGFGLAR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +G G+ G V     RL   Q+  A+KK+    D+    +  + ELKI+    H N++ + 
Sbjct: 62  IGNGAYGVVSSARRRLTGQQV--AIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 119
Query: 554 GFC------SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHE 606
                     E     +V +LM +    + + H  Q P  ++ V   L  + RGL Y+H 
Sbjct: 120 DILRPTVPYGEFKSVYVVLDLMESDL--HQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH- 175
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD---TNMRGTMGY 663
               Q+IH D+KP N+L     ++ N   KI DFG+++ L           T    T  Y
Sbjct: 176 --SAQVIHRDLKPSNLL-----VNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWY 228
Query: 664 VAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRR 695
            APE + ++   T  +D++S G +  E++  R+
Sbjct: 229 RAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS     R I   K T +E AVK ++K      EE    L+      H N++ L   
Sbjct: 30  IGVGSYSVCKRCIH--KATNMEFAVKIIDKSKRDPTEEIEILLRY---GQHPNIITLKDV 84
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE---GQRPGWVQRVEIALGVARGLLYLHEECETQI 612
             +     +V ELM  G L + +  +    +R    +   +   + + + YLH +    +
Sbjct: 85  YDDGKYVYVVTELMKGGELLDKILRQKFFSER----EASAVLFTITKTVEYLHAQG---V 137
Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV 672
           +H D+KP N+L   ++ +   + +I DFG +K L  +     T    T  +VAPE L   
Sbjct: 138 VHRDLKPSNILYVDESGNPESI-RICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLERQ 195
Query: 673 PVTTKVDVFSFGVMLLEIICG 693
                 D++S GV+L  ++ G
Sbjct: 196 GYDAACDIWSLGVLLYTMLTG 216

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 40/214 (18%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT---ELKIIGRTHHKNLVRL 552
           +G GS GKV   +     TQ ++A+K + + + K ++  M    E+  +    H ++++L
Sbjct: 17  LGEGSFGKV--KLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFH-------EGQRPGWVQRVEIALGVARGLLYLH 605
               +     ++V E    G L +++         EG+R  + Q++  A+       Y H
Sbjct: 75  YDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRR--FFQQIICAIE------YCH 125
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR----GTM 661
                +I+H D+KP+N+L     LD N   KI+DFG+S ++      TD N      G+ 
Sbjct: 126 RH---KIVHRDLKPENLL-----LDDNLNVKIADFGLSNIM------TDGNFLKTSCGSP 171
Query: 662 GYVAPEWLR-NVPVTTKVDVFSFGVMLLEIICGR 694
            Y APE +   +    +VDV+S G++L  ++ GR
Sbjct: 172 NYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTIGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +P G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ K++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-KVADFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGF------CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL          E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI D G+++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDAGLAR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 97/216 (44%), Gaps = 36/216 (16%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           VG G  G+V+RG+   +   ++I   + E+   +  E + T L       H N   +LGF
Sbjct: 16  VGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVL-----LRHDN---ILGF 67
Query: 556 CSEE-------DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            + +        +  L+     +G+L +FL  +   P    R  +A+  A GL +LH E 
Sbjct: 68  IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALR--LAVSAACGLAHLHVEI 125
Query: 609 -----ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD--TNMR-GT 660
                +  I H D K +NVL     + +N    I+D G++ + ++     D   N R GT
Sbjct: 126 FGTQGKPAIAHRDFKSRNVL-----VKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGT 180
Query: 661 MGYVAPEWLRNVPVT------TKVDVFSFGVMLLEI 690
             Y+APE L     T         D+++FG++L EI
Sbjct: 181 KRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 89/202 (44%), Gaps = 13/202 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G V++   R     + +   +L+ D E      + E+ ++    HKN+VRL   
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQ-RPGWVQRVEIALGVARGLLYLHEECETQIIH 614
              + K  LV+E         F    G   P  V+     L   +GL + H      ++H
Sbjct: 70  LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL--LKGLGFCHSR---NVLH 124
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+KPQN+L     ++ N   K++DFG+++       R  +    T+ Y  P+ L    +
Sbjct: 125 RDLKPQNLL-----INRNGELKLADFGLARAFGI-PVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 675 -TTKVDVFSFGVMLLEIICGRR 695
            +T +D++S G +  E+    R
Sbjct: 179 YSTSIDMWSAGCIFAELANAAR 200

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      +   ++ +A+KK+     +T  +  + E+KI+    H+N++ +  
Sbjct: 33  IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 91  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 134
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTSDLKICDFGLARVADPDHDHTGFL 186
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 187 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGF------CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL          E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI D G+++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDRGLAR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 102/219 (46%), Gaps = 26/219 (11%)
Query: 484 ELQEATKGFSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLE-----KDIEKTNEEFMT 536
           +++   K + KL  +G G    VY+   R K+T   +A+KK++     +  +  N   + 
Sbjct: 4   DVKSRAKRYEKLDFLGEGQFATVYKA--RDKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61
Query: 537 ELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQ---RPGWVQRVEI 593
           E+K++    H N++ LL     +    LV++ M   T    +  +      P  ++    
Sbjct: 62  EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPSHIK--AY 117
Query: 594 ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT 653
            L   +GL YLH+     I+H D+KP N+L     LD N + K++DFG++K       R 
Sbjct: 118 MLMTLQGLEYLHQHW---ILHRDLKPNNLL-----LDENGVLKLADFGLAKSFG-SPNRA 168
Query: 654 DTNMRGTMGYVAPEWLRNVPV-TTKVDVFSFGVMLLEII 691
             +   T  Y APE L    +    VD+++ G +L E++
Sbjct: 169 YXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+  + +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGLRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGF------CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL          E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI D G+++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDGGLAR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 48  KTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +P G + + L    +R G           A+ +L   YLH  
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 160
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT T + GT  Y+APE
Sbjct: 161 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRTWT-LCGTPEYLAPE 209
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 48/221 (21%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLG 554
           +G G+ G V      +   ++ +A+KK+     +T  +  + E+KI+    H+N++ +  
Sbjct: 33  IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 555 FCS----EEDKRLLV---------YELMPNGTLSN-----FLFHEGQRPGWVQRVEIALG 596
                  E+ K + +         Y+L+    LSN     FL+                 
Sbjct: 91  IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------- 134
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD-- 654
           + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D   T   
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTCDLKICDFGLARVADPDHDHTGFL 186
Query: 655 TNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           T    T  Y APE + N    TK +D++S G +L E++  R
Sbjct: 187 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 99/224 (44%), Gaps = 40/224 (17%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G V+    ++ D    I   +L  + E   E+ M E+K + +  H  +VR    
Sbjct: 13  LGRGGFGVVFEAKNKVDDCNYAIKRIRL-PNRELAREKVMREVKALAKLEHPGIVRYFNA 71
Query: 556 CSEED---------KRLLVY---ELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVA 598
             E++          ++ +Y   +L     L +++       E +R   +    I L +A
Sbjct: 72  WLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH---IFLQIA 128
Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT----- 653
             + +LH +    ++H D+KP N+     T+D   + K+ DFG+   +++D+        
Sbjct: 129 EAVEFLHSKG---LMHRDLKPSNIFF---TMDD--VVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 654 ------DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
                  T   GT  Y++PE +     + KVD+FS G++L E++
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 481 TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQI--EIAVKKLEKDIEKTNEEFMT-- 536
           T  E+ E  +  S  VG+G+ G V        DT+    +AVKKL +  +       T  
Sbjct: 16  TIWEVPERYQNLSP-VGSGAYGSVCAAF----DTKTGHRVAVKKLSRPFQSIIHAKRTYR 70
Query: 537 ELKIIGRTHHKNLVRLLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
           EL+++    H+N++ LL   +      E +   LV  LM    L+N +  +      VQ 
Sbjct: 71  ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQF 129
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
             +   + RGL Y+H      IIH D+KP N+      ++ +   KI DF +++      
Sbjct: 130 --LIYQILRGLKYIHS---ADIIHRDLKPSNL-----AVNEDCELKILDFYLAR------ 173
Query: 651 TRTDTNMRG---TMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR 694
             TD  M G   T  Y APE + N +     VD++S G ++ E++ GR
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 14/204 (6%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           S+++G G +GKV +  +  K TQ + A+K L+ D  K   E     +     H   +V +
Sbjct: 21  SQVLGLGINGKVLQ--IFNKRTQEKFALKMLQ-DCPKARREVELHWRASQCPHIVRIVDV 77
Query: 553 LGFCSEEDKRLL-VYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEECE 609
                   K LL V E +  G L + +   G +  + +R   EI   +   + YLH    
Sbjct: 78  YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS--- 133
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I H D+KP+N+L   K    N + K++DFG +K      + T+     T  YVAPE L
Sbjct: 134 INIAHRDVKPENLLYTSKR--PNAILKLTDFGFAKETTSHNSLTEPCY--TPYYVAPEVL 189
Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
                    D++S GV++  ++CG
Sbjct: 190 GPEKYDKSCDMWSLGVIMYILLCG 213

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 35/228 (15%)
Query: 488 ATKGF------SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLE---------KDIEKTNE 532
           +T GF       +++G G S  V R I   K T  E AVK ++         +++++  E
Sbjct: 11  STHGFYENYEPKEILGRGVSSVVRRCIH--KPTCKEYAVKIIDVTGGGSFSAEEVQELRE 68
Query: 533 EFMTELKIIGR-THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV 591
             + E+ I+ + + H N+++L           LV++LM  G L ++L  +        R 
Sbjct: 69  ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR- 127
Query: 592 EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT 651
           +I   +   +  LH+     I+H D+KP+N+L     LD +   K++DFG S  L+  + 
Sbjct: 128 KIMRALLEVICALHK---LNIVHRDLKPENIL-----LDDDMNIKLTDFGFSCQLDPGEK 179
Query: 652 RTDTNMRGTMGYVAPEWLR-----NVPVTTK-VDVFSFGVMLLEIICG 693
             +    GT  Y+APE +      N P   K VD++S GV++  ++ G
Sbjct: 180 LREVC--GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 33  KTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 90
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +P G + + L    +R G           A+ +L   YLH  
Sbjct: 91  KLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 145
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT T + GT  Y+APE
Sbjct: 146 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRTWT-LCGTPEYLAPE 194
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEMAAG 220

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 108/228 (47%), Gaps = 35/228 (15%)
Query: 488 ATKGF------SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLE---------KDIEKTNE 532
           +T GF       +++G G S  V R I   K T  E AVK ++         +++++  E
Sbjct: 11  STHGFYENYEPKEILGRGVSSVVRRCIH--KPTCKEYAVKIIDVTGGGSFSAEEVQELRE 68
Query: 533 EFMTELKIIGR-THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV 591
             + E+ I+ + + H N+++L           LV++LM  G L ++L  +        R 
Sbjct: 69  ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR- 127
Query: 592 EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT 651
           +I   +   +  LH+     I+H D+KP+N+L     LD +   K++DFG S  L  D  
Sbjct: 128 KIMRALLEVICALHK---LNIVHRDLKPENIL-----LDDDMNIKLTDFGFSCQL--DPG 177
Query: 652 RTDTNMRGTMGYVAPEWLR-----NVPVTTK-VDVFSFGVMLLEIICG 693
               ++ GT  Y+APE +      N P   K VD++S GV++  ++ G
Sbjct: 178 EKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 104/219 (47%), Gaps = 31/219 (14%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL- 552
           K +G G +G V+  +    D    +A+KK+     ++ +  + E+KII R  H N+V++ 
Sbjct: 17  KPLGCGGNGLVFSAVD--NDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVF 74
Query: 553 -------------LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL-GVA 598
                        +G  +E +   +V E M    L+N L    Q P   +   + +  + 
Sbjct: 75  EILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVL---EQGPLLEEHARLFMYQLL 130
Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR 658
           RGL Y+H      ++H D+KP N+ ++ + L    + KI DFG++++++   +       
Sbjct: 131 RGLKYIH---SANVLHRDLKPANLFINTEDL----VLKIGDFGLARIMDPHYSHKGHLSE 183
Query: 659 G--TMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGR 694
           G  T  Y +P  L +    TK +D+++ G +  E++ G+
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 29/217 (13%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLE---------KDIEKTNEEFMTELKIIGR 543
            +++G G S  V R I   K T  E AVK ++         +++++  E  + E+ I+ +
Sbjct: 9   KEILGRGVSSVVRRCIH--KPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRK 66
Query: 544 -THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL 602
            + H N+++L           LV++LM  G L ++L  +        R +I   +   + 
Sbjct: 67  VSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIMRALLEVIC 125
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
            LH+     I+H D+KP+N+L     LD +   K++DFG S  L+  +   +    GT  
Sbjct: 126 ALHK---LNIVHRDLKPENIL-----LDDDMNIKLTDFGFSCQLDPGEKLREVC--GTPS 175
Query: 663 YVAPEWLR-----NVPVTTK-VDVFSFGVMLLEIICG 693
           Y+APE +      N P   K VD++S GV++  ++ G
Sbjct: 176 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 27/211 (12%)
Query: 494 KLVGTGSSGKVY--RGILRLKDTQIEIAVKKLEKDI----EKTNEEFMTELKIIGRTHHK 547
           +++G G  GKV+  R +      +I  A+K L+K +     K       E  I+    H 
Sbjct: 23  RVLGKGGYGKVFQVRKVTGANTGKI-FAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARGLL 602
            +V L+       K  L+ E +  G L        +F E     ++  + +ALG      
Sbjct: 82  FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------ 135
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           +LH++    II+ D+KP+N++L+ +        K++DFG+ K    D T T T   GT+ 
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQG-----HVKLTDFGLCKESIHDGTVTHT-FCGTIE 186
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           Y+APE L        VD +S G ++ +++ G
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           + +GTGS G+V   +++ K+T    A+K L+K      K  E  + E +I    +   LV
Sbjct: 48  RTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLV 105
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E  P G + + L    +R G           A+ +L   YLH  
Sbjct: 106 KLEFSFKDNSNLYMVLEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 160
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ K++DFG +K +   + RT   + GT  Y+APE
Sbjct: 161 --LDLIYRDLKPENLLID----QQGYI-KVADFGFAKRV---KGRT-WXLCGTPEYLAPE 209
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           S+++G G +GKV +  +  K TQ + A+K L+ D  K   E     +     H   +V +
Sbjct: 37  SQVLGLGINGKVLQ--IFNKRTQEKFALKMLQ-DCPKARREVELHWRASQCPHIVRIVDV 93
Query: 553 LGFCSEEDKRLL-VYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEECE 609
                   K LL V E +  G L + +   G +  + +R   EI   +   + YLH    
Sbjct: 94  YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS--- 149
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I H D+KP+N+L   K    N + K++DFG +K      + T      T  YVAPE L
Sbjct: 150 INIAHRDVKPENLLYTSKR--PNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVL 205
Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
                    D++S GV++  ++CG
Sbjct: 206 GPEKYDKSCDMWSLGVIMYILLCG 229

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 42/217 (19%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK------DIEKTNEEFMTELKIIGRTHHK 547
           K +G GS GKV   +     T  ++A+K + K      D++   E  ++ L+++    H 
Sbjct: 19  KTLGEGSFGKV--KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL---RHP 73
Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVAR----GLLY 603
           ++++L      +D+ ++V E   N  L +++         VQR +++   AR     ++ 
Sbjct: 74  HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI---------VQRDKMSEQEARRFFQQIIS 123
Query: 604 LHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR---- 658
             E C   +I+H D+KP+N+L     LD +   KI+DFG+S ++      TD N      
Sbjct: 124 AVEYCHRHKIVHRDLKPENLL-----LDEHLNVKIADFGLSNIM------TDGNFLKTSC 172
Query: 659 GTMGYVAPEWLR-NVPVTTKVDVFSFGVMLLEIICGR 694
           G+  Y APE +   +    +VDV+S GV+L  ++C R
Sbjct: 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 209

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 482 FQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKII 541
           F++L   TK     +    SG++++G  R +   I + V K+     + + +F  E   +
Sbjct: 9   FKQLNFLTK-----LNENHSGELWKG--RWQGNDIVVKVLKVRDWSTRKSRDFNEECPRL 61
Query: 542 GRTHHKNLVRLLGFCSEED--KRLLVYELMPNGTLSNFLFHEGQR--PGWVQRVEIALGV 597
               H N++ +LG C         L+   MP G+L N L HEG        Q V+ AL +
Sbjct: 62  RIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVL-HEGTNFVVDQSQAVKFALDM 120
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
           ARG+ +LH   E  I    +  ++V+     +D +  A+IS   +     K   ++   M
Sbjct: 121 ARGMAFLH-TLEPLIPRHALNSRSVM-----IDEDMTARISMADV-----KFSFQSPGRM 169
Query: 658 RGTMGYVAPEWLRNVPVTT---KVDVFSFGVMLLEII 691
                +VAPE L+  P  T     D++SF V+L E++
Sbjct: 170 YAP-AWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 205

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVR 551
           S+L+G G+  KV +G + L++ + E AVK +EK    +      E++ + +   +KN++ 
Sbjct: 18  SELLGEGAYAKV-QGAVSLQNGK-EYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILE 75
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEECE 609
           L+ F  ++ +  LV+E +  G++   L H  ++  + +R    +   VA  L +LH +  
Sbjct: 76  LIEFFEDDTRFYLVFEKLQGGSI---LAHIQKQKHFNEREASRVVRDVAAALDFLHTK-- 130
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD------TNMRGTMGY 663
             I H D+KP+N+L +  + +     KI DF +   +  + + T       T   G+  Y
Sbjct: 131 -GIAHRDLKPENILCE--SPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEY 187
Query: 664 VAPEWL-----RNVPVTTKVDVFSFGVMLLEIICG 693
           +APE +     +      + D++S GV+L  ++ G
Sbjct: 188 MAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 42/217 (19%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK------DIEKTNEEFMTELKIIGRTHHK 547
           K +G GS GKV   +     T  ++A+K + K      D++   E  ++ L+++    H 
Sbjct: 20  KTLGEGSFGKV--KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL---RHP 74
Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVAR----GLLY 603
           ++++L      +D+ ++V E   N  L +++         VQR +++   AR     ++ 
Sbjct: 75  HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI---------VQRDKMSEQEARRFFQQIIS 124
Query: 604 LHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR---- 658
             E C   +I+H D+KP+N+L     LD +   KI+DFG+S ++      TD N      
Sbjct: 125 AVEYCHRHKIVHRDLKPENLL-----LDEHLNVKIADFGLSNIM------TDGNFLKTSC 173
Query: 659 GTMGYVAPEWLR-NVPVTTKVDVFSFGVMLLEIICGR 694
           G+  Y APE +   +    +VDV+S GV+L  ++C R
Sbjct: 174 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 210

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 42/217 (19%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK------DIEKTNEEFMTELKIIGRTHHK 547
           K +G GS GKV   +     T  ++A+K + K      D++   E  ++ L+++    H 
Sbjct: 14  KTLGEGSFGKV--KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL---RHP 68
Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVAR----GLLY 603
           ++++L      +D+ ++V E   N  L +++         VQR +++   AR     ++ 
Sbjct: 69  HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI---------VQRDKMSEQEARRFFQQIIS 118
Query: 604 LHEECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR---- 658
             E C   +I+H D+KP+N+L     LD +   KI+DFG+S ++      TD N      
Sbjct: 119 AVEYCHRHKIVHRDLKPENLL-----LDEHLNVKIADFGLSNIM------TDGNFLKTSC 167
Query: 659 GTMGYVAPEWLR-NVPVTTKVDVFSFGVMLLEIICGR 694
           G+  Y APE +   +    +VDV+S GV+L  ++C R
Sbjct: 168 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 204

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E  P G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+++D       Y+ K++DFG++K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLMID----QQGYI-KVTDFGLAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           S+++G G +GKV +  +  K TQ + A+K L+ D  K   E     +     H   +V +
Sbjct: 29  SQVLGLGINGKVLQ--IFNKRTQEKFALKMLQ-DCPKARREVELHWRASQCPHIVRIVDV 85
Query: 553 LGFCSEEDKRLL-VYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEECE 609
                   K LL V E +  G L + +   G +  + +R   EI   +   + YLH    
Sbjct: 86  YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS--- 141
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I H D+KP+N+L   K    N + K++DFG +K      + T      T  YVAPE L
Sbjct: 142 INIAHRDVKPENLLYTSKR--PNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVL 197
Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
                    D++S GV++  ++CG
Sbjct: 198 GPEKYDKSCDMWSLGVIMYILLCG 221

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 36/214 (16%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNE---EFMTELKIIGRTHHKNLV 550
           K +G GS GKV   +     T  ++A+K + K +   ++       E+  +    H +++
Sbjct: 10  KTLGEGSFGKV--KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHII 67
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVAR----GLLYLHE 606
           +L      +D+ ++V E   N  L +++         VQR +++   AR     ++   E
Sbjct: 68  KLYDVIKSKDEIIMVIEYAGN-ELFDYI---------VQRDKMSEQEARRFFQQIISAVE 117
Query: 607 ECET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR----GTM 661
            C   +I+H D+KP+N+L     LD +   KI+DFG+S ++      TD N      G+ 
Sbjct: 118 YCHRHKIVHRDLKPENLL-----LDEHLNVKIADFGLSNIM------TDGNFLKTSCGSP 166
Query: 662 GYVAPEWLR-NVPVTTKVDVFSFGVMLLEIICGR 694
            Y APE +   +    +VDV+S GV+L  ++C R
Sbjct: 167 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 200

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 52/224 (23%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+RG  R ++  ++I   + E+   +  E + T +       H+N   +LGF
Sbjct: 12  IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVM-----LRHEN---ILGF 63
Query: 556 CSEEDKR-------LLVYELMPNGTLSNFLFH-----EGQRPGWVQRVEIALGVARGLLY 603
            + ++K         LV +   +G+L ++L       EG        +++AL  A GL +
Sbjct: 64  IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAH 116
Query: 604 LHEEC-----ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT--- 655
           LH E      +  I H D+K +N+L     +  N    I+D G++    +  + TDT   
Sbjct: 117 LHMEIVGTQGKPAIAHRDLKSKNIL-----VKKNGTCCIADLGLAV---RHDSATDTIDI 168
Query: 656 --NMR-GTMGYVAPEWL------RNVPVTTKVDVFSFGVMLLEI 690
             N R GT  Y+APE L      ++     + D+++ G++  EI
Sbjct: 169 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 25/164 (15%)
Query: 546 HKNLVRLLGFCSE----EDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
           H+NL++ +         E +  L+      G+L+++L  +G    W +   +A  ++RGL
Sbjct: 68  HENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYL--KGNIITWNELCHVAETMSRGL 125
Query: 602 LYLHEEC--------ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT 653
            YLHE+         +  I H D K +NVL     L ++  A ++DFG++      +   
Sbjct: 126 SYLHEDVPWCRGEGHKPSIAHRDFKSKNVL-----LKSDLTAVLADFGLAVRFEPGKPPG 180
Query: 654 DTNMR-GTMGYVAPEWLRNV-----PVTTKVDVFSFGVMLLEII 691
           DT+ + GT  Y+APE L            ++D+++ G++L E++
Sbjct: 181 DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 52/224 (23%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+RG  R ++  ++I   + E+   +  E + T +       H+N   +LGF
Sbjct: 11  IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVM-----LRHEN---ILGF 62
Query: 556 CSEEDKR-------LLVYELMPNGTLSNFLFH-----EGQRPGWVQRVEIALGVARGLLY 603
            + ++K         LV +   +G+L ++L       EG        +++AL  A GL +
Sbjct: 63  IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAH 115
Query: 604 LHEEC-----ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT--- 655
           LH E      +  I H D+K +N+L     +  N    I+D G++    +  + TDT   
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNIL-----VKKNGTCCIADLGLAV---RHDSATDTIDI 167
Query: 656 --NMR-GTMGYVAPEWL------RNVPVTTKVDVFSFGVMLLEI 690
             N R GT  Y+APE L      ++     + D+++ G++  EI
Sbjct: 168 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           S+++G G +GKV +  +  K TQ + A+K L+ D  K   E     +     H   +V +
Sbjct: 22  SQVLGLGINGKVLQ--IFNKRTQEKFALKMLQ-DCPKARREVELHWRASQCPHIVRIVDV 78
Query: 553 LGFCSEEDKRLL-VYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEECE 609
                   K LL V E +  G L + +   G +  + +R   EI   +   + YLH    
Sbjct: 79  YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS--- 134
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I H D+KP+N+L   K    N + K++DFG +K      + T      T  YVAPE L
Sbjct: 135 INIAHRDVKPENLLYTSKR--PNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVL 190
Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
                    D++S GV++  ++CG
Sbjct: 191 GPEKYDKSCDMWSLGVIMYILLCG 214

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +P G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 48  KTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +P G + + L    +R G           A+ +L   YLH  
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 160
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 161 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 209
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           S+++G G +GKV +  +  K TQ + A+K L+ D  K   E     +     H   +V +
Sbjct: 21  SQVLGLGINGKVLQ--IFNKRTQEKFALKMLQ-DCPKARREVELHWRASQCPHIVRIVDV 77
Query: 553 LGFCSEEDKRLL-VYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEECE 609
                   K LL V E +  G L + +   G +  + +R   EI   +   + YLH    
Sbjct: 78  YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS--- 133
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I H D+KP+N+L   K    N + K++DFG +K      + T      T  YVAPE L
Sbjct: 134 INIAHRDVKPENLLYTSKR--PNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVL 189
Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
                    D++S GV++  ++CG
Sbjct: 190 GPEKYDKSCDMWSLGVIMYILLCG 213

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           S+++G G +GKV +  +  K TQ + A+K L+ D  K   E     +     H   +V +
Sbjct: 27  SQVLGLGINGKVLQ--IFNKRTQEKFALKMLQ-DCPKARREVELHWRASQCPHIVRIVDV 83
Query: 553 LGFCSEEDKRLL-VYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEECE 609
                   K LL V E +  G L + +   G +  + +R   EI   +   + YLH    
Sbjct: 84  YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS--- 139
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I H D+KP+N+L   K    N + K++DFG +K      + T      T  YVAPE L
Sbjct: 140 INIAHRDVKPENLLYTSKR--PNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVL 195
Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
                    D++S GV++  ++CG
Sbjct: 196 GPEKYDKSCDMWSLGVIMYILLCG 219

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +P G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 52/224 (23%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+RG  R ++  ++I   + E+   +  E + T +       H+N   +LGF
Sbjct: 17  IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVM-----LRHEN---ILGF 68
Query: 556 CSEEDKR-------LLVYELMPNGTLSNFLFH-----EGQRPGWVQRVEIALGVARGLLY 603
            + ++K         LV +   +G+L ++L       EG        +++AL  A GL +
Sbjct: 69  IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAH 121
Query: 604 LHEEC-----ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT--- 655
           LH E      +  I H D+K +N+L     +  N    I+D G++    +  + TDT   
Sbjct: 122 LHMEIVGTQGKPAIAHRDLKSKNIL-----VKKNGTCCIADLGLAV---RHDSATDTIDI 173
Query: 656 --NMR-GTMGYVAPEWL------RNVPVTTKVDVFSFGVMLLEI 690
             N R GT  Y+APE L      ++     + D+++ G++  EI
Sbjct: 174 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           S+++G G +GKV +  +  K TQ + A+K L+ D  K   E     +     H   +V +
Sbjct: 28  SQVLGLGINGKVLQ--IFNKRTQEKFALKMLQ-DCPKARREVELHWRASQCPHIVRIVDV 84
Query: 553 LGFCSEEDKRLL-VYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEECE 609
                   K LL V E +  G L + +   G +  + +R   EI   +   + YLH    
Sbjct: 85  YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS--- 140
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I H D+KP+N+L   K    N + K++DFG +K      + T      T  YVAPE L
Sbjct: 141 INIAHRDVKPENLLYTSKR--PNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVL 196
Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
                    D++S GV++  ++CG
Sbjct: 197 GPEKYDKSCDMWSLGVIMYILLCG 220

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 52/224 (23%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+RG  R ++  ++I   + E+   +  E + T +       H+N   +LGF
Sbjct: 37  IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVM-----LRHEN---ILGF 88
Query: 556 CSEEDKR-------LLVYELMPNGTLSNFLFH-----EGQRPGWVQRVEIALGVARGLLY 603
            + ++K         LV +   +G+L ++L       EG        +++AL  A GL +
Sbjct: 89  IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAH 141
Query: 604 LHEEC-----ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT--- 655
           LH E      +  I H D+K +N+L     +  N    I+D G++    +  + TDT   
Sbjct: 142 LHMEIVGTQGKPAIAHRDLKSKNIL-----VKKNGTCCIADLGLAV---RHDSATDTIDI 193
Query: 656 --NMR-GTMGYVAPEWL------RNVPVTTKVDVFSFGVMLLEI 690
             N R GT  Y+APE L      ++     + D+++ G++  EI
Sbjct: 194 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E  P G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+++D       Y+ K++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLMID----QQGYI-KVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 48  KTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +P G + + L    +R G           A+ +L   YLH  
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLHS- 160
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 161 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 209
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           S+++G G +GKV +  +  K TQ + A+K L+ D  K   E     +     H   +V +
Sbjct: 23  SQVLGLGINGKVLQ--IFNKRTQEKFALKMLQ-DCPKARREVELHWRASQCPHIVRIVDV 79
Query: 553 LGFCSEEDKRLL-VYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEECE 609
                   K LL V E +  G L + +   G +  + +R   EI   +   + YLH    
Sbjct: 80  YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS--- 135
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I H D+KP+N+L   K    N + K++DFG +K      + T      T  YVAPE L
Sbjct: 136 INIAHRDVKPENLLYTSKR--PNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVL 191
Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
                    D++S GV++  ++CG
Sbjct: 192 GPEKYDKSCDMWSLGVIMYILLCG 215

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 52/224 (23%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+RG  R ++  ++I   + E+   +  E + T +       H+N   +LGF
Sbjct: 14  IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVM-----LRHEN---ILGF 65
Query: 556 CSEEDKR-------LLVYELMPNGTLSNFLFH-----EGQRPGWVQRVEIALGVARGLLY 603
            + ++K         LV +   +G+L ++L       EG        +++AL  A GL +
Sbjct: 66  IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAH 118
Query: 604 LHEEC-----ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT--- 655
           LH E      +  I H D+K +N+L     +  N    I+D G++    +  + TDT   
Sbjct: 119 LHMEIVGTQGKPAIAHRDLKSKNIL-----VKKNGTCCIADLGLAV---RHDSATDTIDI 170
Query: 656 --NMR-GTMGYVAPEWL------RNVPVTTKVDVFSFGVMLLEI 690
             N R GT  Y+APE L      ++     + D+++ G++  EI
Sbjct: 171 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           VG G  G+V+RG  + ++  ++I   + EK   +  E + T +       H+N   +LGF
Sbjct: 45  VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVM-----LRHEN---ILGF 96
Query: 556 CSEE-------DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            + +        +  L+      G+L ++L  +      V  + I L +A GL +LH E 
Sbjct: 97  IASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 609 -----ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT--NMR-GT 660
                +  I H D+K +N+L     +  N    I+D G++ + ++   + D   N R GT
Sbjct: 155 FGTQGKPAIAHRDLKSKNIL-----VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 209
Query: 661 MGYVAPEWL-RNVPVT-----TKVDVFSFGVMLLEI 690
             Y+APE L   + V       +VD+++FG++L E+
Sbjct: 210 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           +  G+ YLH+     I+H D+KPQN+LL   ++      KI DFG+S+ +       +  
Sbjct: 140 ILEGVYYLHQ---NNIVHLDLKPQNILL--SSIYPLGDIKIVDFGMSRKIGHACELRE-- 192
Query: 657 MRGTMGYVAPEWLRNVPVTTKVDVFSFGVM 686
           + GT  Y+APE L   P+TT  D+++ G++
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGII 222

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +++G G +GKV     R    +  +   KL  D  K  +E     +  G  H   +V +L
Sbjct: 35  QVLGLGVNGKVLECFHRRTGQKCAL---KLLYDSPKARQEVDHHWQASGGPH---IVCIL 88
Query: 554 GFCS--EEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEE 607
                    KR  L++ E M  G L + +   G +  + +R   EI   +   + +LH  
Sbjct: 89  DVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQ-AFTEREAAEIMRDIGTAIQFLHSH 147
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               I H D+KP+N+L   K  D   + K++DFG +K   ++  +T      T  YVAPE
Sbjct: 148 ---NIAHRDVKPENLLYTSKEKDA--VLKLTDFGFAKETTQNALQTPCY---TPYYVAPE 199
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L         D++S GV++  ++CG
Sbjct: 200 VLGPEKYDKSCDMWSLGVIMYILLCG 225

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 52/224 (23%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G  G+V+RG  R ++  ++I   + E+   +  E + T +       H+N   +LGF
Sbjct: 50  IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVM-----LRHEN---ILGF 101
Query: 556 CSEEDKR-------LLVYELMPNGTLSNFLFH-----EGQRPGWVQRVEIALGVARGLLY 603
            + ++K         LV +   +G+L ++L       EG        +++AL  A GL +
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAH 154
Query: 604 LHEEC-----ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT--- 655
           LH E      +  I H D+K +N+L     +  N    I+D G++    +  + TDT   
Sbjct: 155 LHMEIVGTQGKPAIAHRDLKSKNIL-----VKKNGTCCIADLGLAV---RHDSATDTIDI 206
Query: 656 --NMR-GTMGYVAPEWL------RNVPVTTKVDVFSFGVMLLEI 690
             N R GT  Y+APE L      ++     + D+++ G++  EI
Sbjct: 207 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
            +++G G +GKV     R    +  +   KL  D  K  +E     +  G  H   +V +
Sbjct: 15  KQVLGLGVNGKVLECFHRRTGQKCAL---KLLYDSPKARQEVDHHWQASGGPH---IVCI 68
Query: 553 LGFCS--EEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHE 606
           L         KR  L++ E M  G L + +   G +  + +R   EI   +   + +LH 
Sbjct: 69  LDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQ-AFTEREAAEIMRDIGTAIQFLHS 127
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
                I H D+KP+N+L   K  D   + K++DFG +K   ++  +T      T  YVAP
Sbjct: 128 H---NIAHRDVKPENLLYTSKEKDA--VLKLTDFGFAKETTQNALQTPCY---TPYYVAP 179
Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICG 693
           E L         D++S GV++  ++CG
Sbjct: 180 EVLGPEKYDKSCDMWSLGVIMYILLCG 206

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +P G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E  P G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+++D       Y+ K++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLMID----QQGYI-KVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +P G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +P G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           VG G  G+V+RG  + ++  ++I   + EK   +  E + T +       H+N   +LGF
Sbjct: 16  VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVM-----LRHEN---ILGF 67
Query: 556 CSEE-------DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            + +        +  L+      G+L ++L  +      V  + I L +A GL +LH E 
Sbjct: 68  IASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 609 -----ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT--NMR-GT 660
                +  I H D+K +N+L     +  N    I+D G++ + ++   + D   N R GT
Sbjct: 126 FGTQGKPAIAHRDLKSKNIL-----VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 180
Query: 661 MGYVAPEWL-RNVPVT-----TKVDVFSFGVMLLEI 690
             Y+APE L   + V       +VD+++FG++L E+
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           S+++G G +GKV +  +  K TQ + A+K L+ D  K   E     +     H   +V +
Sbjct: 23  SQVLGLGINGKVLQ--IFNKRTQEKFALKMLQ-DCPKARREVELHWRASQCPHIVRIVDV 79
Query: 553 LGFCSEEDKRLL-VYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEECE 609
                   K LL V E +  G L + +   G +  + +R   EI   +   + YLH    
Sbjct: 80  YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS--- 135
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I H D+KP+N+L   K    N + K++DFG +K      + T      T  YVAPE L
Sbjct: 136 INIAHRDVKPENLLYTSKR--PNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVL 191
Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
                    D++S GV++  ++CG
Sbjct: 192 GPEKYDKSCDMWSLGVIMYILLCG 215

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           VG G  G+V+RG  + ++  ++I   + EK   +  E + T +       H+N   +LGF
Sbjct: 16  VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVM-----LRHEN---ILGF 67
Query: 556 CSEE-------DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            + +        +  L+      G+L ++L  +      V  + I L +A GL +LH E 
Sbjct: 68  IASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 609 -----ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT--NMR-GT 660
                +  I H D+K +N+L     +  N    I+D G++ + ++   + D   N R GT
Sbjct: 126 FGTQGKPAIAHRDLKSKNIL-----VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 180
Query: 661 MGYVAPEWL-RNVPVT-----TKVDVFSFGVMLLEI 690
             Y+APE L   + V       +VD+++FG++L E+
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 13/197 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ G V++   R     + +   +L+ D E      + E+ ++    HKN+VRL   
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQ-RPGWVQRVEIALGVARGLLYLHEECETQIIH 614
              + K  LV+E         F    G   P  V+     L   +GL + H      ++H
Sbjct: 70  LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL--LKGLGFCHSR---NVLH 124
Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV 674
            D+KPQN+L     ++ N   K+++FG+++       R  +    T+ Y  P+ L    +
Sbjct: 125 RDLKPQNLL-----INRNGELKLANFGLARAFGI-PVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 675 -TTKVDVFSFGVMLLEI 690
            +T +D++S G +  E+
Sbjct: 179 YSTSIDMWSAGCIFAEL 195

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           S+++G G +GKV +  +  K TQ + A+K L+ D  K   E     +     H   +V +
Sbjct: 67  SQVLGLGINGKVLQ--IFNKRTQEKFALKMLQ-DCPKARREVELHWRASQCPHIVRIVDV 123
Query: 553 LGFCSEEDKRLL-VYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEECE 609
                   K LL V E +  G L + +   G +  + +R   EI   +   + YLH    
Sbjct: 124 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS--- 179
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I H D+KP+N+L   K    N + K++DFG +K      + T      T  YVAPE L
Sbjct: 180 INIAHRDVKPENLLYTSKR--PNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVL 235
Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
                    D++S GV++  ++CG
Sbjct: 236 GPEKYDKSCDMWSLGVIMYILLCG 259

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 12/165 (7%)
Query: 531 NEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
            E+   E+ I     H+++V   GF  + D   +V EL    +L     H+ ++      
Sbjct: 65  REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPE 122
Query: 591 VEIAL-GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
               L  +  G  YLH     ++IH D+K  N+ L+      +   KI DFG++  +  D
Sbjct: 123 ARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLN-----EDLEVKIGDFGLATKVEYD 174
Query: 650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
             R  T + GT  Y+APE L     + +VDV+S G ++  ++ G+
Sbjct: 175 GERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 218

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLXGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNV 622
           ++V+E++    L+    +E +    +   +I+  +  GL Y+H  C   IIH DIKP+NV
Sbjct: 106 VMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENV 163
Query: 623 LLDLKTLDTNYMA-KISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVF 681
           L+++     N +  KI+D G +   ++      TN   T  Y +PE L   P     D++
Sbjct: 164 LMEIVDSPENLIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIW 219
Query: 682 SFGVMLLEIICG 693
           S   ++ E+I G
Sbjct: 220 STACLIFELITG 231

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNV 622
           ++V+E++    L+    +E +    +   +I+  +  GL Y+H  C   IIH DIKP+NV
Sbjct: 106 VMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENV 163
Query: 623 LLDLKTLDTNYMA-KISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVF 681
           L+++     N +  KI+D G +   ++      TN   T  Y +PE L   P     D++
Sbjct: 164 LMEIVDSPENLIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIW 219
Query: 682 SFGVMLLEIICG 693
           S   ++ E+I G
Sbjct: 220 STACLIFELITG 231

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           S+++G G +GKV +  +  K TQ + A+K L+ D  K   E     +     H   +V +
Sbjct: 73  SQVLGLGINGKVLQ--IFNKRTQEKFALKMLQ-DCPKARREVELHWRASQCPHIVRIVDV 129
Query: 553 LGFCSEEDKRLL-VYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEECE 609
                   K LL V E +  G L + +   G +  + +R   EI   +   + YLH    
Sbjct: 130 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYLHS--- 185
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I H D+KP+N+L   K    N + K++DFG +K      + T      T  YVAPE L
Sbjct: 186 INIAHRDVKPENLLYTSKR--PNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVL 241
Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
                    D++S GV++  ++CG
Sbjct: 242 GPEKYDKSCDMWSLGVIMYILLCG 265

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLAGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 12/165 (7%)
Query: 531 NEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
            E+   E+ I     H+++V   GF  + D   +V EL    +L     H+ ++      
Sbjct: 61  REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPE 118
Query: 591 VEIAL-GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
               L  +  G  YLH     ++IH D+K  N+ L+      +   KI DFG++  +  D
Sbjct: 119 ARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLN-----EDLEVKIGDFGLATKVEYD 170
Query: 650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
             R  T + GT  Y+APE L     + +VDV+S G ++  ++ G+
Sbjct: 171 GERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 12/165 (7%)
Query: 531 NEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
            E+   E+ I     H+++V   GF  + D   +V EL    +L     H+ ++      
Sbjct: 61  REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPE 118
Query: 591 VEIAL-GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
               L  +  G  YLH     ++IH D+K  N+ L+      +   KI DFG++  +  D
Sbjct: 119 ARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLN-----EDLEVKIGDFGLATKVEYD 170
Query: 650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
             R  T + GT  Y+APE L     + +VDV+S G ++  ++ G+
Sbjct: 171 GERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E  P G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+++D       Y+ +++DFG++K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLMID----QQGYI-QVTDFGLAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 17/201 (8%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS     R I   K T  E AVK ++K      EE    L+      H N++ L   
Sbjct: 30  IGVGSYSVCKRCIH--KATNXEFAVKIIDKSKRDPTEEIEILLRY---GQHPNIITLKDV 84
Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHE---GQRPGWVQRVEIALGVARGLLYLHEECETQI 612
             +     +V EL   G L + +  +    +R    +   +   + + + YLH +    +
Sbjct: 85  YDDGKYVYVVTELXKGGELLDKILRQKFFSER----EASAVLFTITKTVEYLHAQG---V 137
Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV 672
           +H D+KP N+L   ++ +   + +I DFG +K L  +     T    T  +VAPE L   
Sbjct: 138 VHRDLKPSNILYVDESGNPESI-RICDFGFAKQLRAENGLLXTPCY-TANFVAPEVLERQ 195
Query: 673 PVTTKVDVFSFGVMLLEIICG 693
                 D++S GV+L   + G
Sbjct: 196 GYDAACDIWSLGVLLYTXLTG 216

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 27/211 (12%)
Query: 494 KLVGTGSSGKVY--RGILRLKDTQIEIAVKKLEKDI----EKTNEEFMTELKIIGRTHHK 547
           +++G G  GKV+  R +      +I  A+K L+K +     K       E  I+    H 
Sbjct: 23  RVLGKGGYGKVFQVRKVTGANTGKI-FAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARGLL 602
            +V L+       K  L+ E +  G L        +F E     ++  + +ALG      
Sbjct: 82  FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------ 135
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           +LH++    II+ D+KP+N++L+ +        K++DFG+ K    D T T     GT+ 
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQG-----HVKLTDFGLCKESIHDGTVTHX-FCGTIE 186
Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           Y+APE L        VD +S G ++ +++ G
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E  P G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+++D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLMID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 22/223 (9%)
Query: 483 QELQEATKGFS--KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKTNEE--FMTE 537
           +E+Q   + F   K++G G+ G+V   ++++K+T+   A+K L K ++ K  E   F  E
Sbjct: 67  KEMQLHREDFEIIKVIGRGAFGEV--AVVKMKNTERIYAMKILNKWEMLKRAETACFREE 124
Query: 538 LKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALG 596
             ++     + +  L     +E+   LV +    G L   L   E + P  + R  I   
Sbjct: 125 RDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEM 184
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           V    L +    +   +H DIKP NVLLD+     N   +++DFG    +N D T   + 
Sbjct: 185 V----LAIDSIHQLHYVHRDIKPDNVLLDV-----NGHIRLADFGSCLKMNDDGTVQSSV 235
Query: 657 MRGTMGYVAPEWLRNVP-----VTTKVDVFSFGVMLLEIICGR 694
             GT  Y++PE L+ +         + D +S GV + E++ G 
Sbjct: 236 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 91/204 (44%), Gaps = 14/204 (6%)
Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           S+++G G +GKV +  +  K TQ + A+K L+ D  K   E     +     H   +V +
Sbjct: 67  SQVLGLGINGKVLQ--IFNKRTQEKFALKXLQ-DCPKARREVELHWRASQCPHIVRIVDV 123
Query: 553 LGFCSEEDKRLL-VYELMPNGTLSNFLFHEGQRPGWVQR--VEIALGVARGLLYLHEECE 609
                   K LL V E +  G L + +   G +  + +R   EI   +   + YLH    
Sbjct: 124 YENLYAGRKCLLIVXECLDGGELFSRIQDRGDQ-AFTEREASEIXKSIGEAIQYLHS--- 179
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             I H D+KP+N+L   K    N + K++DFG +K      + T      T  YVAPE L
Sbjct: 180 INIAHRDVKPENLLYTSKR--PNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVL 235
Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
                    D +S GV+   ++CG
Sbjct: 236 GPEKYDKSCDXWSLGVIXYILLCG 259

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 22/223 (9%)
Query: 483 QELQEATKGFS--KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKTNEE--FMTE 537
           +E+Q   + F   K++G G+ G+V   ++++K+T+   A+K L K ++ K  E   F  E
Sbjct: 83  KEMQLHREDFEIIKVIGRGAFGEV--AVVKMKNTERIYAMKILNKWEMLKRAETACFREE 140
Query: 538 LKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALG 596
             ++     + +  L     +E+   LV +    G L   L   E + P  + R  I   
Sbjct: 141 RDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEM 200
Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           V    L +    +   +H DIKP NVLLD+     N   +++DFG    +N D T   + 
Sbjct: 201 V----LAIDSIHQLHYVHRDIKPDNVLLDV-----NGHIRLADFGSCLKMNDDGTVQSSV 251
Query: 657 MRGTMGYVAPEWLRNVP-----VTTKVDVFSFGVMLLEIICGR 694
             GT  Y++PE L+ +         + D +S GV + E++ G 
Sbjct: 252 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 15/148 (10%)
Query: 549 LVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           ++RLL +    D  +L+ E   P   L +F+   G       + E+A      +L     
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----ALQEELARSFFWQVLEAVRH 172
Query: 608 CET-QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
           C    ++H DIK +N+L+DL   +     K+ DFG   LL KD   TD +  GT  Y  P
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGEL----KLIDFGSGALL-KDTVYTDFD--GTRVYSPP 225
Query: 667 EWLRNVPVTTK-VDVFSFGVMLLEIICG 693
           EW+R      +   V+S G++L +++CG
Sbjct: 226 EWIRYHRYHGRSAAVWSLGILLYDMVCG 253

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 68  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G + + L    +R G           A+ +L   YLH  
Sbjct: 126 KLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 180
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K + K  T T   + GT  Y+APE
Sbjct: 181 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV-KGATWT---LCGTPEYLAPE 229
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 34  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 91
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G +    F   +R G           A+ +L   YLH  
Sbjct: 92  KLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS- 146
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D    +  Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 147 --LDLIYRDLKPENLLID----EQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 195
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 196 IILSKGYNKAVDWWALGVLIYEMAAG 221

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   L 
Sbjct: 48  KTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLT 105
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E  P G + + L    +R G           A+ +L   YLH  
Sbjct: 106 KLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 160
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+++D       Y+ K++DFG +K +   + RT   + GT  Y+APE
Sbjct: 161 --LDLIYRDLKPENLMID----QQGYI-KVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 209
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 11/103 (10%)
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL--NK 648
           +  +  VARG+ +L      + IH D+  +N+LL       N + KI DFG+++ +  N 
Sbjct: 202 ISYSFQVARGMEFLSSR---KCIHRDLAARNILLS-----ENNVVKICDFGLARDIYKNP 253
Query: 649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
           D  R   + R  + ++APE + +   +TK DV+S+GV+L EI 
Sbjct: 254 DYVRK-GDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIF 295

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 29/227 (12%)
Query: 479 EFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTE 537
           +FT ++L++  +     +G G+ G V + + +    QI +AVK++   + EK  ++ + +
Sbjct: 18  DFTAEDLKDLGE-----IGRGAYGSVNKMVHK-PSGQI-MAVKRIRSTVDEKEQKQLLMD 70
Query: 538 LKIIGRTHH-KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV---EI 593
           L ++ R+     +V+  G    E    +  ELM       + +        +      +I
Sbjct: 71  LDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKI 130
Query: 594 ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT 653
            L   + L +L E    +IIH DIKP N+L     LD +   K+ DFGIS  L     +T
Sbjct: 131 TLATVKALNHLKEN--LKIIHRDIKPSNIL-----LDRSGNIKLCDFGISGQLVDSIAKT 183
Query: 654 DTNMRGTMGYVAPEWLRNVPVTT------KVDVFSFGVMLLEIICGR 694
                G   Y+APE  R  P  +      + DV+S G+ L E+  GR
Sbjct: 184 RDA--GCRPYMAPE--RIDPSASRQGYDVRSDVWSLGITLYELATGR 226

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   L 
Sbjct: 48  KTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLT 105
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E  P G + + L    +R G           A+ +L   YLH  
Sbjct: 106 KLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 160
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+++D       Y+ K++DFG +K +   + RT   + GT  Y+APE
Sbjct: 161 --LDLIYRDLKPENLMID----QQGYI-KVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 209
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   L 
Sbjct: 48  KTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLT 105
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E  P G + + L    +R G           A+ +L   YLH  
Sbjct: 106 KLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLHS- 160
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+++D       Y+ K++DFG +K +   + RT   + GT  Y+APE
Sbjct: 161 --LDLIYRDLKPENLMID----QQGYI-KVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 209
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G +    F   +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 68  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G + + L    +R G           A+ +L   YLH  
Sbjct: 126 KLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLHS- 180
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 181 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 229
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 25/209 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT--------NEEFMTELKIIGRTH 545
           +++G G  G+VY    R  DT    A+K L+K   K         NE  M  L ++    
Sbjct: 195 RIIGRGGFGEVYG--CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM--LSLVSTGD 250
Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
              +V +       DK   + +LM  G L   L   G       R   A  +  GL ++H
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMH 309
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                 +++ D+KP N+L     LD +   +ISD G++   +K +        GT GY+A
Sbjct: 310 NRF---VVYRDLKPANIL-----LDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMA 358
Query: 666 PEWL-RNVPVTTKVDVFSFGVMLLEIICG 693
           PE L + V   +  D FS G ML +++ G
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRG 387

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 90/209 (43%), Gaps = 25/209 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT--------NEEFMTELKIIGRTH 545
           +++G G  G+VY    R  DT    A+K L+K   K         NE  M  L   G   
Sbjct: 194 RIIGRGGFGEVYG--CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 251
Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
              +V +       DK   + +LM  G L   L   G       R   A  +  GL ++H
Sbjct: 252 F--IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMH 308
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                 +++ D+KP N+L     LD +   +ISD G++   +K +        GT GY+A
Sbjct: 309 NRF---VVYRDLKPANIL-----LDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMA 357
Query: 666 PEWL-RNVPVTTKVDVFSFGVMLLEIICG 693
           PE L + V   +  D FS G ML +++ G
Sbjct: 358 PEVLQKGVAYDSSADWFSLGCMLFKLLRG 386

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G +    F   +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 48  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G +    F   +R G           A+ +L   YLH  
Sbjct: 106 KLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS- 160
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 161 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 209
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 38/224 (16%)
Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHH-------- 546
           ++G G+ G+V +    L D++   A+KK+    EK +   ++E+ ++   +H        
Sbjct: 13  VLGQGAFGQVVKARNAL-DSRY-YAIKKIRHTEEKLST-ILSEVMLLASLNHQYVVRYYA 69
Query: 547 -----KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
                +N V+ +    ++    +  E   NGTL + +  E       +   +   +   L
Sbjct: 70  AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK--DQTRTD----- 654
            Y+H +    IIH D+KP N+      +D +   KI DFG++K +++  D  + D     
Sbjct: 130 SYIHSQG---IIHRDLKPMNIF-----IDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 655 ------TNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEII 691
                 T+  GT  YVA E L        K+D++S G++  E+I
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 90/209 (43%), Gaps = 25/209 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT--------NEEFMTELKIIGRTH 545
           +++G G  G+VY    R  DT    A+K L+K   K         NE  M  L   G   
Sbjct: 195 RIIGRGGFGEVYG--CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 252
Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
              +V +       DK   + +LM  G L   L   G       R   A  +  GL ++H
Sbjct: 253 F--IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMH 309
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                 +++ D+KP N+L     LD +   +ISD G++   +K +        GT GY+A
Sbjct: 310 NRF---VVYRDLKPANIL-----LDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMA 358
Query: 666 PEWL-RNVPVTTKVDVFSFGVMLLEIICG 693
           PE L + V   +  D FS G ML +++ G
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRG 387

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 90/209 (43%), Gaps = 25/209 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT--------NEEFMTELKIIGRTH 545
           +++G G  G+VY    R  DT    A+K L+K   K         NE  M  L   G   
Sbjct: 195 RIIGRGGFGEVYG--CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 252
Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
              +V +       DK   + +LM  G L   L   G       R   A  +  GL ++H
Sbjct: 253 F--IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMH 309
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                 +++ D+KP N+L     LD +   +ISD G++   +K +        GT GY+A
Sbjct: 310 NRF---VVYRDLKPANIL-----LDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMA 358
Query: 666 PEWL-RNVPVTTKVDVFSFGVMLLEIICG 693
           PE L + V   +  D FS G ML +++ G
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRG 387

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           +L     +     +V E +  G + + L   G+      R   A  +     YLH     
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLHS---L 160
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
            +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE + 
Sbjct: 161 DLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPEIIL 211
Query: 671 NVPVTTKVDVFSFGVMLLEIICG 693
           +      VD ++ GV++ E+  G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 42  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 99
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G + + L    +R G           A+ +L   YLH  
Sbjct: 100 KLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLHS- 154
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 155 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 203
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 204 IILSKGYNKAVDWWALGVLIYEMAAG 229

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 118/287 (41%), Gaps = 55/287 (19%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLV 550
           + +G G   K Y   +   DT+   A K + K +       E+  TE+ I     + ++V
Sbjct: 48  RFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVV 105
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVE---IALGVARGLLYLHEE 607
              GF  ++D   +V E+    +L        +R   V   E         +G+ YLH  
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLEL----HKRRKAVTEPEARYFMRQTIQGVQYLHN- 160
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH D+K  N+ L+      +   KI DFG++  +  D  R  T + GT  Y+APE
Sbjct: 161 --NRVIHRDLKLGNLFLN-----DDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPE 212
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXXXXWVISCM------ 721
            L     + +VD++S G +L  ++ G+                     +  SC+      
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGK-------------------PPFETSCLKETYIR 253
Query: 722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI 768
           + +N   +  H   V S L R  RM        H DP LRPS+ +++
Sbjct: 254 IKKNEYSVPRHINPVASALIR--RML-------HADPTLRPSVAELL 291

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 531 NEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
            E+   E+ I     H+++V   GF  + D   +V EL    +L     H+ ++      
Sbjct: 83  REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPE 140
Query: 591 VEIAL-GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
               L  +  G  YLH     ++IH D+K  N+ L+      +   KI DFG++  +  D
Sbjct: 141 ARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLN-----EDLEVKIGDFGLATKVEYD 192
Query: 650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
             R    + GT  Y+APE L     + +VDV+S G ++  ++ G+
Sbjct: 193 GERKKV-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 236

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 30/217 (13%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR--THHKNLVR 551
           K +G+G S KV++ +L  K     I    LE+   +T + +  E+  + +   H   ++R
Sbjct: 62  KQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 120
Query: 552 LLGFCSEEDKRLLVYELMPNGT--LSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           L  +   E     +Y +M  G   L+++L  +     W +R      +   +  +H+   
Sbjct: 121 LYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG- 175
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR-GTMGYVAPEW 668
             I+H D+KP N L+       + M K+ DFGI+  +  D T    + + GT+ Y+ PE 
Sbjct: 176 --IVHSDLKPANFLI------VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 227
Query: 669 LRNVPVTTK-----------VDVFSFGVMLLEIICGR 694
           ++++  + +            DV+S G +L  +  G+
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 531 NEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
            E+   E+ I     H+++V   GF  + D   +V EL    +L     H+ ++      
Sbjct: 85  REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPE 142
Query: 591 VEIAL-GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
               L  +  G  YLH     ++IH D+K  N+ L+      +   KI DFG++  +  D
Sbjct: 143 ARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLN-----EDLEVKIGDFGLATKVEYD 194
Query: 650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
             R    + GT  Y+APE L     + +VDV+S G ++  ++ G+
Sbjct: 195 GERKKV-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 531 NEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
            E+   E+ I     H+++V   GF  + D   +V EL    +L     H+ ++      
Sbjct: 59  REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPE 116
Query: 591 VEIAL-GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
               L  +  G  YLH     ++IH D+K  N+ L+      +   KI DFG++  +  D
Sbjct: 117 ARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLN-----EDLEVKIGDFGLATKVEYD 168
Query: 650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
             R    + GT  Y+APE L     + +VDV+S G ++  ++ G+
Sbjct: 169 GERKKV-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 30/217 (13%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR--THHKNLVR 551
           K +G+G S KV++ +L  K     I    LE+   +T + +  E+  + +   H   ++R
Sbjct: 62  KQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 120
Query: 552 LLGFCSEEDKRLLVYELMPNGT--LSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           L  +   E     +Y +M  G   L+++L  +     W +R      +   +  +H+   
Sbjct: 121 LYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG- 175
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR-GTMGYVAPEW 668
             I+H D+KP N L+       + M K+ DFGI+  +  D T    + + GT+ Y+ PE 
Sbjct: 176 --IVHSDLKPANFLI------VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 227
Query: 669 LRNVPVTTK-----------VDVFSFGVMLLEIICGR 694
           ++++  + +            DV+S G +L  +  G+
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 104/231 (45%), Gaps = 32/231 (13%)
Query: 482 FQELQEATKGFS--KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELK 539
           FQ +    + +S  K +G+G S KV++ +L  K     I    LE+   +T + +  E+ 
Sbjct: 20  FQSMSVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 78
Query: 540 IIGR--THHKNLVRLLGFCSEEDKRLLVYELMPNGT--LSNFLFHEGQRPGWVQRVEIAL 595
            + +   H   ++RL  +   E     +Y +M  G   L+++L  +     W +R     
Sbjct: 79  YLNKLQQHSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWK 134
Query: 596 GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT 655
            +   +  +H+     I+H D+KP N L+       + M K+ DFGI+  +  D T    
Sbjct: 135 NMLEAVHTIHQHG---IVHSDLKPANFLI------VDGMLKLIDFGIANQMQPDTTSVVK 185
Query: 656 NMR-GTMGYVAPEWLRNVPVTTK-----------VDVFSFGVMLLEIICGR 694
           + + GT+ Y+ PE ++++  + +            DV+S G +L  +  G+
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 19/112 (16%)
Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
           + I + +A  + +LH +    ++H D+KP N+     T+D   + K+ DFG+   +++D+
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFF---TMDD--VVKVGDFGLVTAMDQDE 218
Query: 651 TR-----------TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
                        T     GT  Y++PE +     + KVD+FS G++L E++
Sbjct: 219 EEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
           GF  E+    +  E  P     +FL  E         +  +  VA+G+ +L      + I
Sbjct: 164 GFVEEKSLSDVEEEEAPEDLYKDFLTLE-------HLICYSFQVAKGMEFL---ASRKCI 213
Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT-NMRGTMGYVAPEWLRNV 672
           H D+  +N+LL  K +      KI DFG+++ + KD       + R  + ++APE + + 
Sbjct: 214 HRDLAARNILLSEKNV-----VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 268
Query: 673 PVTTKVDVFSFGVMLLEII 691
             T + DV+SFGV+L EI 
Sbjct: 269 VYTIQSDVWSFGVLLWEIF 287

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
           GF  E+    +  E  P     +FL  E         +  +  VA+G+ +L      + I
Sbjct: 166 GFVEEKSLSDVEEEEAPEDLYKDFLTLE-------HLICYSFQVAKGMEFL---ASRKCI 215
Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT-NMRGTMGYVAPEWLRNV 672
           H D+  +N+LL  K +      KI DFG+++ + KD       + R  + ++APE + + 
Sbjct: 216 HRDLAARNILLSEKNV-----VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 270
Query: 673 PVTTKVDVFSFGVMLLEII 691
             T + DV+SFGV+L EI 
Sbjct: 271 VYTIQSDVWSFGVLLWEIF 289

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
           GF  E+    +  E  P     +FL  E         +  +  VA+G+ +L      + I
Sbjct: 171 GFVEEKSLSDVEEEEAPEDLYKDFLTLE-------HLICYSFQVAKGMEFL---ASRKCI 220
Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT-NMRGTMGYVAPEWLRNV 672
           H D+  +N+LL  K +      KI DFG+++ + KD       + R  + ++APE + + 
Sbjct: 221 HRDLAARNILLSEKNV-----VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 275
Query: 673 PVTTKVDVFSFGVMLLEII 691
             T + DV+SFGV+L EI 
Sbjct: 276 VYTIQSDVWSFGVLLWEIF 294

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 16/139 (11%)
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
           GF  E+    +  E  P     +FL  E         +  +  VA+G+ +L      + I
Sbjct: 173 GFVEEKSLSDVEEEEAPEDLYKDFLTLE-------HLICYSFQVAKGMEFL---ASRKCI 222
Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT-NMRGTMGYVAPEWLRNV 672
           H D+  +N+LL  K +      KI DFG+++ + KD       + R  + ++APE + + 
Sbjct: 223 HRDLAARNILLSEKNV-----VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR 277
Query: 673 PVTTKVDVFSFGVMLLEII 691
             T + DV+SFGV+L EI 
Sbjct: 278 VYTIQSDVWSFGVLLWEIF 296

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G +    F   +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ ++  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYQMAAG 234

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+++D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLIID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IIISKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++  +T    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 42/233 (18%)
Query: 482 FQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKII 541
           F EL++        +G+G  G V++ + RL D  I  A+K+ +K +  + +E     ++ 
Sbjct: 13  FHELEK--------IGSGEFGSVFKCVKRL-DGCI-YAIKRSKKPLAGSVDEQNALREVY 62
Query: 542 GRT---HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIA---L 595
                  H ++VR     +E+D  L+  E    G+L++ +    +   + +  E+    L
Sbjct: 63  AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 122
Query: 596 GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL--------------DTNYMAKISDFG 641
            V RGL Y+H      ++H DIKP N+ +   ++                  M KI D G
Sbjct: 123 QVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG 179
Query: 642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLR-NVPVTTKVDVFSFGVMLLEIICG 693
               ++  Q        G   ++A E L+ N     K D+F+     L ++C 
Sbjct: 180 HVTRISSPQVE-----EGDSRFLANEVLQENYTHLPKADIFALA---LTVVCA 224

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 30/217 (13%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR--THHKNLVR 551
           K +G+G S KV++ +L  K     I    LE+   +T + +  E+  + +   H   ++R
Sbjct: 15  KQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 73
Query: 552 LLGFCSEEDKRLLVYELMPNGT--LSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           L  +   E     +Y +M  G   L+++L  +     W +R      +   +  +H+   
Sbjct: 74  LYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG- 128
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR-GTMGYVAPEW 668
             I+H D+KP N L+       + M K+ DFGI+  +  D T    + + GT+ Y+ PE 
Sbjct: 129 --IVHSDLKPANFLI------VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 180
Query: 669 LRNVPVTTK-----------VDVFSFGVMLLEIICGR 694
           ++++  + +            DV+S G +L  +  G+
Sbjct: 181 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217

>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 42/233 (18%)
Query: 482 FQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKII 541
           F EL++        +G+G  G V++ + RL D  I  A+K+ +K +  + +E     ++ 
Sbjct: 11  FHELEK--------IGSGEFGSVFKCVKRL-DGCI-YAIKRSKKPLAGSVDEQNALREVY 60
Query: 542 GRT---HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIA---L 595
                  H ++VR     +E+D  L+  E    G+L++ +    +   + +  E+    L
Sbjct: 61  AHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLL 120
Query: 596 GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL--------------DTNYMAKISDFG 641
            V RGL Y+H      ++H DIKP N+ +   ++                  M KI D G
Sbjct: 121 QVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLG 177
Query: 642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLR-NVPVTTKVDVFSFGVMLLEIICG 693
               ++  Q        G   ++A E L+ N     K D+F+     L ++C 
Sbjct: 178 HVTRISSPQVE-----EGDSRFLANEVLQENYTHLPKADIFALA---LTVVCA 222

>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 34/219 (15%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT---HHKNLVRL 552
           +G+G  G V++ + RL D  I  A+K+ +K +  + +E     ++        H ++VR 
Sbjct: 17  IGSGEFGSVFKCVKRL-DGCI-YAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIA---LGVARGLLYLHEECE 609
               +E+D  L+  E    G+L++ +    +   + +  E+    L V RGL Y+H    
Sbjct: 75  FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS--- 131
Query: 610 TQIIHCDIKPQNVLLDLKTL--------------DTNYMAKISDFGISKLLNKDQTRTDT 655
             ++H DIKP N+ +   ++                  M KI D G    ++  Q     
Sbjct: 132 MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE--- 188
Query: 656 NMRGTMGYVAPEWLR-NVPVTTKVDVFSFGVMLLEIICG 693
              G   ++A E L+ N     K D+F+     L ++C 
Sbjct: 189 --EGDSRFLANEVLQENYTHLPKADIFALA---LTVVCA 222

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 30/217 (13%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR--THHKNLVR 551
           K +G+G S KV++ +L  K     I    LE+   +T + +  E+  + +   H   ++R
Sbjct: 18  KQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 76
Query: 552 LLGFCSEEDKRLLVYELMPNGT--LSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           L  +   E     +Y +M  G   L+++L  +     W +R      +   +  +H+   
Sbjct: 77  LYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG- 131
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR-GTMGYVAPEW 668
             I+H D+KP N L+       + M K+ DFGI+  +  D T    + + GT+ Y+ PE 
Sbjct: 132 --IVHSDLKPANFLI------VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 183
Query: 669 LRNVPVTTK-----------VDVFSFGVMLLEIICGR 694
           ++++  + +            DV+S G +L  +  G+
Sbjct: 184 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 118/287 (41%), Gaps = 55/287 (19%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLV 550
           + +G G   K Y   +   DT+   A K + K +       E+  TE+ I     + ++V
Sbjct: 48  RFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVV 105
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVE---IALGVARGLLYLHEE 607
              GF  ++D   +V E+    +L        +R   V   E         +G+ YLH  
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLEL----HKRRKAVTEPEARYFMRQTIQGVQYLHN- 160
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH D+K  N+ L+      +   KI DFG++  +  D  R   ++ GT  Y+APE
Sbjct: 161 --NRVIHRDLKLGNLFLN-----DDMDVKIGDFGLATKIEFDGERK-KDLCGTPNYIAPE 212
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXXXXWVISCM------ 721
            L     + +VD++S G +L  ++ G+                     +  SC+      
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGK-------------------PPFETSCLKETYIR 253
Query: 722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI 768
           + +N   +  H   V S L R  RM        H DP LRPS+ +++
Sbjct: 254 IKKNEYSVPRHINPVASALIR--RML-------HADPTLRPSVAELL 291

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKTNEE--FMTELKIIGRTHHKNLV 550
           K++G G+ G+V   +++LK+     A+K L K ++ K  E   F  E  ++     K + 
Sbjct: 80  KVIGRGAFGEV--AVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWIT 137
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECE 609
            L     +++   LV +    G L   L   E + P  + R  +A  V    + +    +
Sbjct: 138 TLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMV----IAIDSVHQ 193
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
              +H DIKP N+L+D+     N   +++DFG    L +D T   +   GT  Y++PE L
Sbjct: 194 LHYVHRDIKPDNILMDM-----NGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEIL 248
Query: 670 RNVP-----VTTKVDVFSFGVMLLEIICGR 694
           + +         + D +S GV + E++ G 
Sbjct: 249 QAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVRLL 553
           ++G G+  +V   I  +  T  E AVK +EK           E++++ +   H+N++ L+
Sbjct: 20  VLGEGAHARVQTCINLI--TSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
            F  EED+  LV+E M  G++ + + H+ +    ++   +   VA  L +LH +    I 
Sbjct: 78  EFFEEEDRFYLVFEKMRGGSILSHI-HKRRHFNELEASVVVQDVASALDFLHNK---GIA 133
Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISK--LLNKDQTRTDT----NMRGTMGYVAPE 667
           H D+KP+N+L +     +    KI DFG+     LN D +   T       G+  Y+APE
Sbjct: 134 HRDLKPENILCEHPNQVSP--VKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 668 WLRNVPVTTKV-----DVFSFGVMLLEIICG 693
            +        +     D++S GV+L  ++ G
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSG 222

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 30/217 (13%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR--THHKNLVR 551
           K +G+G S KV++ +L  K     I    LE+   +T + +  E+  + +   H   ++R
Sbjct: 14  KQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 72
Query: 552 LLGFCSEEDKRLLVYELMPNGT--LSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           L  +   E     +Y +M  G   L+++L  +     W +R      +   +  +H+   
Sbjct: 73  LYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG- 127
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR-GTMGYVAPEW 668
             I+H D+KP N L+       + M K+ DFGI+  +  D T    + + GT+ Y+ PE 
Sbjct: 128 --IVHSDLKPANFLI------VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 179
Query: 669 LRNVPVTTK-----------VDVFSFGVMLLEIICGR 694
           ++++  + +            DV+S G +L  +  G+
Sbjct: 180 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 216

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 118/287 (41%), Gaps = 55/287 (19%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLV 550
           + +G G   K Y   +   DT+   A K + K +       E+  TE+ I     + ++V
Sbjct: 32  RFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVV 89
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVE---IALGVARGLLYLHEE 607
              GF  ++D   +V E+    +L        +R   V   E         +G+ YLH  
Sbjct: 90  GFHGFFEDDDFVYVVLEICRRRSLLEL----HKRRKAVTEPEARYFMRQTIQGVQYLHN- 144
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH D+K  N+ L+      +   KI DFG++  +  D  R   ++ GT  Y+APE
Sbjct: 145 --NRVIHRDLKLGNLFLN-----DDMDVKIGDFGLATKIEFDGERK-KDLCGTPNYIAPE 196
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXXXXWVISCM------ 721
            L     + +VD++S G +L  ++ G+                     +  SC+      
Sbjct: 197 VLCKKGHSFEVDIWSLGCILYTLLVGK-------------------PPFETSCLKETYIR 237
Query: 722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI 768
           + +N   +  H   V S L R  RM        H DP LRPS+ +++
Sbjct: 238 IKKNEYSVPRHINPVASALIR--RML-------HADPTLRPSVAELL 275

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 38/243 (15%)
Query: 463 KRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKV---YRGILRLKDTQIEIA 519
           KR N F   S+EI    FT  +  +  K     +G+G+ G V   Y  IL     +  +A
Sbjct: 5   KRDNNF--YSVEIGDSTFTVLKRYQNLKP----IGSGAQGIVCAAYDAIL-----ERNVA 53
Query: 520 VKKLEKDIEKTN--EEFMTELKIIGRTHHKNLVRLLGF------CSEEDKRLLVYELMPN 571
           +KKL +  +     +    EL ++   +HKN++ LL          E     +V ELM +
Sbjct: 54  IKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-D 112
Query: 572 GTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD 630
             LS  +  E       +R+   L  +  G+ +LH      IIH D+KP N+++      
Sbjct: 113 ANLSQVIQMELDH----ERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVK----- 160
Query: 631 TNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
           ++   KI DFG+++        T   +  T  Y APE +  +     VD++S GV++ E+
Sbjct: 161 SDATLKILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGVIMGEM 218
Query: 691 ICG 693
           I G
Sbjct: 219 IKG 221

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           K +G+G+ G V R ++R K +   +AVK +E+  EK +E    E+       H N+VR  
Sbjct: 24  KDIGSGNFG-VAR-LMRDKQSNELVAVKYIERG-EKIDENVKREIINHRSLRHPNIVRFK 80
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
                     +V E    G L   +     F E +   + Q++        G+ Y H   
Sbjct: 81  EVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYCHA-- 132
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK--LLNKDQTRTDTNMRGTMGYVAP 666
             Q+ H D+K +N LLD          KI DFG SK  +L+     T     GT  Y+AP
Sbjct: 133 -MQVCHRDLKLENTLLDGSPAPR---LKICDFGYSKSSVLHSQPKST----VGTPAYIAP 184
Query: 667 EWLRNVPVTTKV-DVFSFGVMLLEIICG 693
           E L       KV DV+S GV L  ++ G
Sbjct: 185 EVLLKKEYDGKVADVWSCGVTLYVMLVG 212

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G +    F   +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT  Y+AP 
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEYLAPA 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 117/287 (40%), Gaps = 55/287 (19%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLV 550
           + +G G   K Y   +   DT+   A K + K +       E+  TE+ I     + ++V
Sbjct: 48  RFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVV 105
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVE---IALGVARGLLYLHEE 607
              GF  ++D   +V E+    +L        +R   V   E         +G+ YLH  
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLEL----HKRRKAVTEPEARYFMRQTIQGVQYLHN- 160
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH D+K  N+ L+      +   KI DFG++  +  D  R    + GT  Y+APE
Sbjct: 161 --NRVIHRDLKLGNLFLN-----DDMDVKIGDFGLATKIEFDGERKKX-LCGTPNYIAPE 212
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGRRHXXXXXXXXXXXXXXXXXXXWVISCM------ 721
            L     + +VD++S G +L  ++ G+                     +  SC+      
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGK-------------------PPFETSCLKETYIR 253
Query: 722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI 768
           + +N   +  H   V S L R  RM        H DP LRPS+ +++
Sbjct: 254 IKKNEYSVPRHINPVASALIR--RML-------HADPTLRPSVAELL 291

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 38/243 (15%)
Query: 463 KRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKV---YRGILRLKDTQIEIA 519
           KR N F   S+EI    FT  +  +  K     +G+G+ G V   Y  IL     +  +A
Sbjct: 5   KRDNNF--YSVEIGDSTFTVLKRYQNLKP----IGSGAQGIVVAAYDAIL-----ERNVA 53
Query: 520 VKKLEKDIEKTN--EEFMTELKIIGRTHHKNLVRLLGF------CSEEDKRLLVYELMPN 571
           +KKL +  +     +    EL ++   +HKN++ LL          E     +V ELM +
Sbjct: 54  IKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-D 112
Query: 572 GTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD 630
             LS  +  E       +R+   L  +  G+ +LH      IIH D+KP N+++      
Sbjct: 113 ANLSQVIQMELDH----ERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVK----- 160
Query: 631 TNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
           ++   KI DFG+++        T   +  T  Y APE +  +     VD++S GV++ E+
Sbjct: 161 SDATLKILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGVIMGEM 218
Query: 691 ICG 693
           I G
Sbjct: 219 IKG 221

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 30/217 (13%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR--THHKNLVR 551
           K +G+G S KV++ +L  K     I    LE+   +T + +  E+  + +   H   ++R
Sbjct: 62  KQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 120
Query: 552 LLGFCSEEDKRLLVYELMPNGT--LSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           L  +   E     +Y +M  G   L+++L  +     W +R      +   +  +H+   
Sbjct: 121 LYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIHQHG- 175
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR-GTMGYVAPEW 668
             I+H D+KP N L+       + M K+ DFGI+  +  D T    + + G + Y+ PE 
Sbjct: 176 --IVHSDLKPANFLI------VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEA 227
Query: 669 LRNVPVTTK-----------VDVFSFGVMLLEIICGR 694
           ++++  + +            DV+S G +L  +  G+
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 103/231 (44%), Gaps = 32/231 (13%)
Query: 482 FQELQEATKGFS--KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELK 539
           FQ +    + +S  K +G+G S KV++ +L  K     I    LE+   +T + +  E+ 
Sbjct: 20  FQSMSVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 78
Query: 540 IIGR--THHKNLVRLLGFCSEEDKRLLVYELMPNGT--LSNFLFHEGQRPGWVQRVEIAL 595
            + +   H   ++RL  +   E     +Y +M  G   L+++L  +     W +R     
Sbjct: 79  YLNKLQQHSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWK 134
Query: 596 GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT 655
            +   +  +H+     I+H D+KP N L+       + M K+ DFGI+  +  D      
Sbjct: 135 NMLEAVHTIHQHG---IVHSDLKPANFLI------VDGMLKLIDFGIANQMQPDXXXVVK 185
Query: 656 NMR-GTMGYVAPEWLRNVPVTTK-----------VDVFSFGVMLLEIICGR 694
           + + GT+ Y+ PE ++++  + +            DV+S G +L  +  G+
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236

>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 31/214 (14%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT---HHKNLVRL 552
           +G+G  G V++ + RL D  I  A+K+ +K +  + +E     ++        H ++VR 
Sbjct: 15  IGSGEFGSVFKCVKRL-DGCI-YAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 72
Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIA---LGVARGLLYLHEECE 609
               +E+D  L+  E    G+L++ +    +   + +  E+    L V RGL Y+H    
Sbjct: 73  FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS--- 129
Query: 610 TQIIHCDIKPQNVLLDLKTL--------------DTNYMAKISDFGISKLLNKDQTRTDT 655
             ++H DIKP N+ +   ++                  M KI D G    ++  Q     
Sbjct: 130 MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE--- 186
Query: 656 NMRGTMGYVAPEWLR-NVPVTTKVDVFSFGVMLL 688
              G   ++A E L+ N     K D+F+  + ++
Sbjct: 187 --EGDSRFLANEVLQENYTHLPKADIFALALTVV 218

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           K +G G+ G V R ++R K     +AVK +E+  EK +E    E+       H N+VR  
Sbjct: 25  KDIGAGNFG-VAR-LMRDKQANELVAVKYIERG-EKIDENVKREIINHRSLRHPNIVRFK 81
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
                     +V E    G L   +     F E +   + Q++        G+ Y H   
Sbjct: 82  EVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYAHA-- 133
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL-LNKDQTRTDTNMRGTMGYVAPE 667
             Q+ H D+K +N LLD          KI+DFG SK  +   Q ++     GT  Y+APE
Sbjct: 134 -MQVAHRDLKLENTLLDGSPAPR---LKIADFGYSKASVLHSQPKSAV---GTPAYIAPE 186
Query: 668 WLRNVPVTTKV-DVFSFGVMLLEIICG 693
            L       KV DV+S GV L  ++ G
Sbjct: 187 VLLKKEYDGKVADVWSCGVTLYVMLVG 213

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 35/219 (15%)
Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           L+G G+ G V       K T   +A+KK+E  D        + E+KI+    H+N++ + 
Sbjct: 18  LLGEGAYGVVCSATH--KPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIF 75
Query: 554 GFCSEE-----DKRLLVYELMP---NGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
                +     ++  ++ ELM    +  +S  +  +     ++ +   A+ V  G     
Sbjct: 76  NIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHG----- 130
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK---DQTRTDTNMRGTMG 662
               + +IH D+KP N+L     +++N   K+ DFG+++++++   D +       G   
Sbjct: 131 ----SNVIHRDLKPSNLL-----INSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 663 YVAPEWLRNVPV-------TTKVDVFSFGVMLLEIICGR 694
           YVA  W R   V       +  +DV+S G +L E+   R
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 38/224 (16%)
Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHH-------- 546
           ++G G+ G+V +    L D++   A+KK+    EK +   ++E+ ++   +H        
Sbjct: 13  VLGQGAFGQVVKARNAL-DSRY-YAIKKIRHTEEKLST-ILSEVMLLASLNHQYVVRYYA 69
Query: 547 -----KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
                +N V+ +    ++    +  E   N TL + +  E       +   +   +   L
Sbjct: 70  AWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK--DQTRTD----- 654
            Y+H +    IIH D+KP N+      +D +   KI DFG++K +++  D  + D     
Sbjct: 130 SYIHSQG---IIHRDLKPMNIF-----IDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 655 ------TNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEII 691
                 T+  GT  YVA E L        K+D++S G++  E+I
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 14/206 (6%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLG- 554
           VG G+ G VY+   +      + A+K++E      +     E+ ++    H N++ L   
Sbjct: 29  VGRGTYGHVYKAKRKDGKDDKDYALKQIEG--TGISMSACREIALLRELKHPNVISLQKV 86
Query: 555 FCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLY-----LHEEC 608
           F S  D+++ L+++   +       FH   +    + V++  G+ + LLY     +H   
Sbjct: 87  FLSHADRKVWLLFDYAEHDLWHIIKFHRASKAN-KKPVQLPRGMVKSLLYQILDGIHYLH 145
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD-QTRTDTN-MRGTMGYVAP 666
              ++H D+KP N+L+ +         KI+D G ++L N   +   D + +  T  Y AP
Sbjct: 146 ANWVLHRDLKPANILV-MGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 667 EWLRNVPVTTK-VDVFSFGVMLLEII 691
           E L      TK +D+++ G +  E++
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELL 230

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 537 ELKIIGRTHHKNLVRLLG--FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIA 594
           E++++ R  HKN+++L+   +  E+ K  +V E    G          +R    Q     
Sbjct: 56  EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 595 LGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK----DQ 650
             +  GL YLH +    I+H DIKP N+L     L T    KIS  G+++ L+     D 
Sbjct: 116 CQLIDGLEYLHSQ---GIVHKDIKPGNLL-----LTTGGTLKISALGVAEALHPFAADDT 167
Query: 651 TRTDTNMRGTMGYVAPEWLRNVPVTT--KVDVFSFGVMLLEIICG 693
            RT    +G+  +  PE    +   +  KVD++S GV L  I  G
Sbjct: 168 CRTS---QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLV 550
           K +GTGS G+V   +++ K++    A+K L+K      K  E  + E +I+   +   LV
Sbjct: 47  KTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL---YLHEE 607
           +L     +     +V E +  G + + L    +R G           A+ +L   YLH  
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS- 159
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               +I+ D+KP+N+L+D       Y+ +++DFG +K +   + RT   + GT   +APE
Sbjct: 160 --LDLIYRDLKPENLLID----QQGYI-QVTDFGFAKRV---KGRT-WXLCGTPEALAPE 208
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            + +      VD ++ GV++ E+  G
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 23/206 (11%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE------FMTELKIIGRTHHKNL 549
           +G+G+ G V+  + + K+ ++ +   K EK +E    E         E+ I+ R  H N+
Sbjct: 32  LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLF---HEGQRPGWVQRVEIALGVARGLLYLHE 606
           +++L     +    LV E   +G L  F F   H          +   L  A G L L +
Sbjct: 92  IKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD 150
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
                IIH DIK +N++     +  ++  K+ DFG +  L  ++ +      GT+ Y AP
Sbjct: 151 -----IIHRDIKDENIV-----IAEDFTIKLIDFGSAAYL--ERGKLFYTFCGTIEYCAP 198
Query: 667 EWLRNVPVT-TKVDVFSFGVMLLEII 691
           E L   P    +++++S GV L  ++
Sbjct: 199 EVLMGNPYRGPELEMWSLGVTLYTLV 224

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEK------DIEKTNEEFMTELKIIGRTHHKN 548
           L+G GS G+V +   R++   + I + K +K       IE    E M +     + +  +
Sbjct: 61  LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVH 120
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV-EIALGVARGLLYLHEE 607
           L R   F    +   LV+E++ +  L + L +   R   +    + A  +   LL+L   
Sbjct: 121 LKRHFMF---RNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL-AT 175
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
            E  IIHCD+KP+N+LL           KI DFG S  L +   R    ++    Y +PE
Sbjct: 176 PELSIIHCDLKPENILL---CNPKRXAIKIVDFGSSCQLGQ---RIYQXIQSRF-YRSPE 228
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L  +P    +D++S G +L+E+  G
Sbjct: 229 VLLGMPYDLAIDMWSLGCILVEMHTG 254

>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 27/217 (12%)
Query: 482 FQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKII 541
           F++L   TK     +    SG++++G  R +   I + V K+     + + +F  E   +
Sbjct: 9   FKQLNFLTK-----LNENHSGELWKG--RWQGNDIVVKVLKVRDWSTRKSRDFNEECPRL 61
Query: 542 GRTHHKNLVRLLGFCSEED--KRLLVYELMPNGTLSNFLFHEGQR--PGWVQRVEIALGV 597
               H N++ +LG C         L+    P G+L N L HEG        Q V+ AL  
Sbjct: 62  RIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVL-HEGTNFVVDQSQAVKFALDX 120
Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
           ARG  +LH   E  I    +  ++V      +D +  A+IS   + K   +   R     
Sbjct: 121 ARGXAFLH-TLEPLIPRHALNSRSV-----XIDEDXTARISXADV-KFSFQSPGRX---- 169
Query: 658 RGTMGYVAPEWLRNVPVTT---KVDVFSFGVMLLEII 691
                +VAPE L+  P  T     D +SF V+L E++
Sbjct: 170 -YAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELV 205

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 98/219 (44%), Gaps = 35/219 (15%)
Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           L+G G+ G V       K T   +A+KK+E  D        + E+KI+    H+N++ + 
Sbjct: 18  LLGEGAYGVVCSATH--KPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIF 75
Query: 554 GFCSEE-----DKRLLVYELMP---NGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
                +     ++  ++ ELM    +  +S  +  +     ++ +   A+ V  G     
Sbjct: 76  NIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHG----- 130
Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK---DQTRTDTNMRGTMG 662
               + +IH D+KP N+L     +++N   K+ DFG+++++++   D +       G + 
Sbjct: 131 ----SNVIHRDLKPSNLL-----INSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE 181
Query: 663 YVAPEWLRNVPV-------TTKVDVFSFGVMLLEIICGR 694
           +VA  W R   V       +  +DV+S G +L E+   R
Sbjct: 182 FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEK------DIEKTNEEFMTELKIIGRTHHKN 548
           L+G GS G+V +   R++   + I + K +K       IE    E M +     + +  +
Sbjct: 42  LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVH 101
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV-EIALGVARGLLYLHEE 607
           L R   F    +   LV+E++ +  L + L +   R   +    + A  +   LL+L   
Sbjct: 102 LKRHFMF---RNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL-AT 156
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
            E  IIHCD+KP+N+LL           KI DFG S  L +   R    ++    Y +PE
Sbjct: 157 PELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQ---RIYQXIQSRF-YRSPE 209
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L  +P    +D++S G +L+E+  G
Sbjct: 210 VLLGMPYDLAIDMWSLGCILVEMHTG 235

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 98/237 (41%), Gaps = 44/237 (18%)
Query: 468 FDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKL---- 523
           +DP+  E  F++ +FQ L          +G GS G+V++  +R K+     AVK+     
Sbjct: 46  YDPSRPESFFQQ-SFQRLSR--------LGHGSYGEVFK--VRSKEDGRLYAVKRSMSPF 94
Query: 524 --EKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL--- 578
              KD  +   E  +  K+     H   VRL     E     L  EL    +L       
Sbjct: 95  RGPKDRARKLAEVGSHEKV---GQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAW 150
Query: 579 ---FHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMA 635
                E Q  G+++   +AL       +LH +    ++H D+KP N+ L  +        
Sbjct: 151 GASLPEAQVWGYLRDTLLALA------HLHSQG---LVHLDVKPANIFLGPRG-----RC 196
Query: 636 KISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC 692
           K+ DFG+  L+            G   Y+APE L+     T  DVFS G+ +LE+ C
Sbjct: 197 KLGDFGL--LVELGTAGAGEVQEGDPRYMAPELLQGS-YGTAADVFSLGLTILEVAC 250

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEK------DIEKTNEEFMTELKIIGRTHHKN 548
           L+G GS G+V +   R++   + I + K +K       IE    E M +     + +  +
Sbjct: 61  LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVH 120
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV-EIALGVARGLLYLHEE 607
           L R   F    +   LV+E++ +  L + L +   R   +    + A  +   LL+L   
Sbjct: 121 LKRHFMF---RNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL-AT 175
Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
            E  IIHCD+KP+N+LL           KI DFG S  L +   R    ++    Y +PE
Sbjct: 176 PELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQ---RIYQXIQSRF-YRSPE 228
Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L  +P    +D++S G +L+E+  G
Sbjct: 229 VLLGMPYDLAIDMWSLGCILVEMHTG 254

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 91/210 (43%), Gaps = 27/210 (12%)
Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F K +G+G+ G V R ++R K T+  +AVK +E+     +E    E+       H N+VR
Sbjct: 24  FVKDIGSGNFG-VAR-LMRDKLTKELVAVKYIERG-AAIDENVQREIINHRSLRHPNIVR 80
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHE 606
                       ++ E    G L   +     F E +   + Q++        G+ Y H 
Sbjct: 81  FKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL------LSGVSYCHS 134
Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK--LLNKDQTRTDTNMRGTMGYV 664
               QI H D+K +N LLD          KI DFG SK  +L+     T     GT  Y+
Sbjct: 135 ---MQICHRDLKLENTLLDGSPAPR---LKICDFGYSKSSVLHSQPKST----VGTPAYI 184
Query: 665 APEWLRNVPVTTKV-DVFSFGVMLLEIICG 693
           APE L       K+ DV+S GV L  ++ G
Sbjct: 185 APEVLLRQEYDGKIADVWSCGVTLYVMLVG 214

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 28/189 (14%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF--MTELKIIGRTHHKNLVRLL 553
           +G G+ G+V++   R + T  ++A+KK+  + EK       + E+KI+    H+N+V L+
Sbjct: 25  IGQGTFGEVFKA--RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 82
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVAR----------GLLY 603
             C  +      Y          F F E    G +  V +   ++           GL Y
Sbjct: 83  EICRTKAS---PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 139
Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK---LLNKDQTRTDTNMRGT 660
           +H     +I+H D+K  NVL+   T D   + K++DFG+++   L    Q     N   T
Sbjct: 140 IH---RNKILHRDMKAANVLI---TRDG--VLKLADFGLARAFSLAKNSQPNRYXNRVVT 191
Query: 661 MGYVAPEWL 669
           + Y  PE L
Sbjct: 192 LWYRPPELL 200

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 20/211 (9%)
Query: 495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVRLL 553
           ++G G+  +V   I  +  T  E AVK +EK           E++++ +   H+N++ L+
Sbjct: 20  VLGEGAHARVQTCINLI--TSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
            F  EED+  LV+E M  G++ + + H+ +    ++   +   VA  L +LH +    I 
Sbjct: 78  EFFEEEDRFYLVFEKMRGGSILSHI-HKRRHFNELEASVVVQDVASALDFLHNK---GIA 133
Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDF--GISKLLNKDQTRTDT----NMRGTMGYVAPE 667
           H D+KP+N+L +     +    KI DF  G    LN D +   T       G+  Y+APE
Sbjct: 134 HRDLKPENILCEHPNQVSP--VKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 668 WLRNVPVTTKV-----DVFSFGVMLLEIICG 693
            +        +     D++S GV+L  ++ G
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSG 222

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 28/189 (14%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF--MTELKIIGRTHHKNLVRLL 553
           +G G+ G+V++   R + T  ++A+KK+  + EK       + E+KI+    H+N+V L+
Sbjct: 26  IGQGTFGEVFKA--RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVAR----------GLLY 603
             C  +      Y          F F E    G +  V +   ++           GL Y
Sbjct: 84  EICRTKAS---PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK---LLNKDQTRTDTNMRGT 660
           +H     +I+H D+K  NVL+   T D   + K++DFG+++   L    Q     N   T
Sbjct: 141 IH---RNKILHRDMKAANVLI---TRDG--VLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 661 MGYVAPEWL 669
           + Y  PE L
Sbjct: 193 LWYRPPELL 201

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 32/191 (16%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF----MTELKIIGRTHHKNLVR 551
           +G G+ G+V++   R + T  ++A+KK+  + EK  E F    + E+KI+    H+N+V 
Sbjct: 26  IGQGTFGEVFKA--RHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVN 81
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVAR----------GL 601
           L+  C  +      Y          F F E    G +  V +   ++           GL
Sbjct: 82  LIEICRTKAS---PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK---LLNKDQTRTDTNMR 658
            Y+H     +I+H D+K  NVL+   T D   + K++DFG+++   L    Q     N  
Sbjct: 139 YYIH---RNKILHRDMKAANVLI---TRDG--VLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 659 GTMGYVAPEWL 669
            T+ Y  PE L
Sbjct: 191 VTLWYRPPELL 201

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 38/243 (15%)
Query: 463 KRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKV---YRGILRLKDTQIEIA 519
           KR N F   S+EI    FT  +  +  K     +G+G+ G V   Y  IL     +  +A
Sbjct: 5   KRDNNF--YSVEIGDSTFTVLKRYQNLKP----IGSGAQGIVCAAYDAIL-----ERNVA 53
Query: 520 VKKLEKDIEKTN--EEFMTELKIIGRTHHKNLVRLLGF------CSEEDKRLLVYELMPN 571
           +KKL +  +     +    EL ++   +HKN++ LL          E     +V ELM +
Sbjct: 54  IKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-D 112
Query: 572 GTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD 630
             LS  +  E       +R+   L  +  G+ +LH      IIH D+KP N+++      
Sbjct: 113 ANLSQVIQMELDH----ERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVK----- 160
Query: 631 TNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
           ++   KI DFG+++        T   +  T  Y APE +  +     VD++S G ++ E+
Sbjct: 161 SDATLKILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 691 ICG 693
           I G
Sbjct: 219 IKG 221

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 93/218 (42%), Gaps = 44/218 (20%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTN--EEFMTELKIIGRTHHKNL 549
           K +G+G+ G V        DT   I +AVKKL +  +     +    EL ++   +HKN+
Sbjct: 28  KPIGSGAQGIVCAAF----DTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 83
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNF----LFHEGQRPGWVQRVEIALGVAR------ 599
           + LL   +            P  TL  F    L  E       Q + + L   R      
Sbjct: 84  ISLLNVFT------------PQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLY 131
Query: 600 ----GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT 655
               G+ +LH      IIH D+KP N+++      ++   KI DFG+++  + +   T  
Sbjct: 132 QMLCGIKHLHS---AGIIHRDLKPSNIVVK-----SDCTLKILDFGLARTASTNFMMTPY 183
Query: 656 NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
            +  T  Y APE +  +     VD++S G ++ E++ G
Sbjct: 184 VV--TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 13/107 (12%)
Query: 592 EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT 651
           +IA+ + + L +LH +    +IH D+KP NVL++          K+ DFGIS  L  D  
Sbjct: 113 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALG-----QVKMCDFGISGYLVDDVA 165
Query: 652 RTDTNMRGTMGYVAPEW----LRNVPVTTKVDVFSFGVMLLEIICGR 694
           + D +  G   Y+APE     L     + K D++S G+ ++E+   R
Sbjct: 166 K-DIDA-GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 210

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 13/203 (6%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE---FMTELKIIGRTHHKNLV 550
           K++G GS G+V +         + + + + EK   +   E    +  L+   + +  N++
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
            +L   +  +   + +EL+          ++ Q        + A  + + L  LH+    
Sbjct: 163 HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK---N 219
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
           +IIHCD+KP+N+LL  +        K+ DFG S     +  R  T ++    Y APE + 
Sbjct: 220 RIIHCDLKPENILLKQQGRSG---IKVIDFGSSCY---EHQRVYTXIQSRF-YRAPEVIL 272
Query: 671 NVPVTTKVDVFSFGVMLLEIICG 693
                  +D++S G +L E++ G
Sbjct: 273 GARYGMPIDMWSLGCILAELLTG 295

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 30/190 (15%)
Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF--MTELKIIGRTHHKNLVRLL 553
           +G G+ G+V++   R + T  ++A+KK+  + EK       + E+KI+    H+N+V L+
Sbjct: 26  IGQGTFGEVFKA--RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 83
Query: 554 GFCSEEDKR--------LLVYELMPN---GTLSNFLFHEGQRPGWVQRVEIALGVARGLL 602
             C  +            LV++   +   G LSN L         ++RV   L    GL 
Sbjct: 84  EICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQML--LNGLY 139
Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK---LLNKDQTRTDTNMRG 659
           Y+H     +I+H D+K  NVL+   T D   + K++DFG+++   L    Q     N   
Sbjct: 140 YIH---RNKILHRDMKAANVLI---TRDG--VLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 660 TMGYVAPEWL 669
           T+ Y  PE L
Sbjct: 192 TLWYRPPELL 201

>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 29/150 (19%)
Query: 546 HKNLVRLLGFCSEEDKR-----LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARG 600
           H ++V++  F    D+       +V E +   +L      +GQ+    + +   L +   
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKR---SKGQKLPVAEAIAYLLEILPA 194
Query: 601 LLYLHEECETQIIHCDIKPQNVLL---DLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
           L YLH      +++ D+KP+N++L    LK +D   +++I+ FG               +
Sbjct: 195 LSYLHS---IGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGY--------------L 237
Query: 658 RGTMGYVAPEWLRNVPVTTKVDVFSFGVML 687
            GT G+ APE +R  P T   D+++ G  L
Sbjct: 238 YGTPGFQAPEIVRTGP-TVATDIYTVGRTL 266

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 88/206 (42%), Gaps = 23/206 (11%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           K +G+G+ G V R ++R K +   +AVK +E+  EK +E    E+       H N+VR  
Sbjct: 25  KDIGSGNFG-VAR-LMRDKQSNELVAVKYIERG-EKIDENVKREIINHRSLRHPNIVRFK 81
Query: 554 GFCSEEDKRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
                     +V E    G L   +     F E +   + Q++        G+ Y H   
Sbjct: 82  EVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL------ISGVSYCHA-- 133
Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
             Q+ H D+K +N LLD          KI  FG SK         DT   GT  Y+APE 
Sbjct: 134 -MQVCHRDLKLENTLLDGSPAPR---LKICAFGYSKSSVLHSQPKDT--VGTPAYIAPEV 187
Query: 669 LRNVPVTTKV-DVFSFGVMLLEIICG 693
           L       KV DV+S GV L  ++ G
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVG 213

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 13/203 (6%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE---FMTELKIIGRTHHKNLV 550
           K++G GS G+V +         + + + + EK   +   E    +  L+   + +  N++
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
            +L   +  +   + +EL+          ++ Q        + A  + + L  LH+    
Sbjct: 163 HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK---N 219
Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
           +IIHCD+KP+N+LL  +        K+ DFG S     +  R  T ++    Y APE + 
Sbjct: 220 RIIHCDLKPENILLKQQGRSG---IKVIDFGSSCY---EHQRVYTXIQSRF-YRAPEVIL 272
Query: 671 NVPVTTKVDVFSFGVMLLEIICG 693
                  +D++S G +L E++ G
Sbjct: 273 GARYGMPIDMWSLGCILAELLTG 295

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 38/243 (15%)
Query: 463 KRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKV---YRGILRLKDTQIEIA 519
           KR N F   S+EI    FT  +  +  K     +G+G+ G V   Y  IL     +  +A
Sbjct: 5   KRDNNF--YSVEIGDSTFTVLKRYQNLKP----IGSGAQGIVCAAYDAIL-----ERNVA 53
Query: 520 VKKLEKDIEKTN--EEFMTELKIIGRTHHKNLVRLLGF------CSEEDKRLLVYELMPN 571
           +KKL +  +     +    EL ++   +HKN++ LL          E     +V ELM +
Sbjct: 54  IKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-D 112
Query: 572 GTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD 630
             LS  +  E       +R+   L  +  G+ +LH      IIH D+KP N+++      
Sbjct: 113 ANLSQVIQMELDH----ERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVK----- 160
Query: 631 TNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
           ++   KI DFG+++        T   +  T  Y APE +  +     VD++S G ++ E+
Sbjct: 161 SDATLKILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 691 ICG 693
           I G
Sbjct: 219 IKG 221

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 52/251 (20%)
Query: 463 KRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKV---YRGILRLKDTQIEIA 519
           KR N F   S+EI    FT  +  +  K     +G+G+ G V   Y  IL     +  +A
Sbjct: 10  KRDNNF--YSVEIGDSTFTVLKRYQNLKP----IGSGAQGIVCAAYDAIL-----ERNVA 58
Query: 520 VKKLEKDIEKTN--EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNF 577
           +KKL +  +     +    EL ++   +HKN++ LL                P  +L  F
Sbjct: 59  IKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLEEF 106
Query: 578 ----LFHEGQRPGWVQRVEIALGVAR----------GLLYLHEECETQIIHCDIKPQNVL 623
               +  E       Q +++ L   R          G+ +LH      IIH D+KP N++
Sbjct: 107 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 163
Query: 624 LDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSF 683
           +      ++   KI DFG+++        T   +  T  Y APE +  +     VD++S 
Sbjct: 164 VK-----SDCTLKILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDLWSV 216
Query: 684 GVMLLEIICGR 694
           G ++ E++C +
Sbjct: 217 GCIMGEMVCHK 227

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 102/245 (41%), Gaps = 38/245 (15%)
Query: 467 YFDPNSMEINFREFTF-QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK 525
           YF  + + I+ + + F Q+L E    +  LV     G  Y             A+K++  
Sbjct: 18  YFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFY-------------ALKRILC 64
Query: 526 DIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE----DKRLLVYELMPNGTLSNFLFHE 581
             ++  EE   E  +    +H N++RL+ +C  E     +  L+      GTL N +   
Sbjct: 65  HEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERL 124
Query: 582 GQRPGWV---QRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLD------LKTLDTN 632
             +  ++   Q + + LG+ RGL  +H +      H D+KP N+LL       L  L + 
Sbjct: 125 KDKGNFLTEDQILWLLLGICRGLEAIHAKGYA---HRDLKPTNILLGDEGQPVLMDLGSM 181
Query: 633 YMAKISDFGISKLLNKDQTRTD-TNMRGTMGYVAPEWL---RNVPVTTKVDVFSFGVMLL 688
             A I   G  + L    T  D    R T+ Y APE      +  +  + DV+S G +L 
Sbjct: 182 NQACIHVEGSRQAL----TLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLY 237
Query: 689 EIICG 693
            ++ G
Sbjct: 238 AMMFG 242

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 44/218 (20%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKDIEKTN--EEFMTELKIIGRTHHKNL 549
           K +G+G+ G V        DT   I +AVKKL +  +     +    EL ++   +HKN+
Sbjct: 30  KPIGSGAQGIVCAAF----DTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNF----LFHEGQRPGWVQRVEIALGVAR------ 599
           + LL                P  TL  F    L  E       Q + + L   R      
Sbjct: 86  ISLLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLY 133
Query: 600 ----GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT 655
               G+ +LH      IIH D+KP N+++      ++   KI DFG+++    +   T  
Sbjct: 134 QMLCGIKHLHS---AGIIHRDLKPSNIVVK-----SDCTLKILDFGLARTACTNFMMTPY 185
Query: 656 NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
            +  T  Y APE +  +     VD++S G ++ E++ G
Sbjct: 186 VV--TRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 46/220 (20%)
Query: 494 KLVGTGSSGKV---YRGILRLKDTQIEIAVKKLEKDIEKTN--EEFMTELKIIGRTHHKN 548
           K +G+G+ G V   Y  IL     +  +A+KKL +  +     +    EL ++   +HKN
Sbjct: 24  KPIGSGAQGIVCAAYDAIL-----ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNF----LFHEGQRPGWVQRVEIALGVAR----- 599
           ++ LL   +            P  +L  F    +  E       Q +++ L   R     
Sbjct: 79  IIGLLNVFT------------PQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL 126
Query: 600 -----GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD 654
                G+ +LH      IIH D+KP N+++      ++   KI DFG+++        T 
Sbjct: 127 YQMLCGIKHLHS---AGIIHRDLKPSNIVVK-----SDCTLKILDFGLARTAGTSFMMTP 178
Query: 655 TNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
             +  T  Y APE +  +     VD++S G ++ E++C +
Sbjct: 179 YVV--TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 592 EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT 651
           +IA+ + + L +LH +    +IH D+KP NVL++          K+ DFGIS  L     
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALG-----QVKMCDFGISGYLVDSVA 209
Query: 652 RTDTNMRGTMGYVAPEW----LRNVPVTTKVDVFSFGVMLLEIICGR 694
           +T     G   Y+APE     L     + K D++S G+ ++E+   R
Sbjct: 210 KTIDA--GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 254

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 38/243 (15%)
Query: 463 KRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKV---YRGILRLKDTQIEIA 519
           KR N F   S+EI    FT  +  +  K     +G+G+ G V   Y  IL     +  +A
Sbjct: 5   KRDNNF--YSVEIGDSTFTVLKRYQNLKP----IGSGAQGIVCAAYDAIL-----ERNVA 53
Query: 520 VKKLEKDIEKTN--EEFMTELKIIGRTHHKNLVRLLGF------CSEEDKRLLVYELMPN 571
           +KKL +  +     +    EL ++   +HKN++ LL          E     +V ELM +
Sbjct: 54  IKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-D 112
Query: 572 GTLSNFLFHEGQRPGWVQRVEIAL-GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD 630
             LS  +  E       +R+   L  +  G+ +LH      IIH D+KP N+++      
Sbjct: 113 ANLSQVIQMELDH----ERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVK----- 160
Query: 631 TNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
           ++   KI DFG+++        T   +  T  Y APE +  +     VD++S G ++ E+
Sbjct: 161 SDATLKILDFGLARTAGTSFMMTPYVV--TRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 691 ICG 693
           I G
Sbjct: 219 IKG 221

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 22/212 (10%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKTNEE--FMTELKIIGRTHHKNLV 550
           K++G G+  +V   ++++K T    A+K + K D+ K  E   F  E  ++     + + 
Sbjct: 67  KVIGRGAFSEV--AVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWIT 124
Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR-PGWVQRVEIALGVARGLLYLHEECE 609
           +L     +E+   LV E    G L   L   G+R P  + R  +A  +   +  +H    
Sbjct: 125 QLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLA-EIVMAIDSVHR--- 180
Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
              +H DIKP N+L     LD     +++DFG    L  D T       GT  Y++PE L
Sbjct: 181 LGYVHRDIKPDNIL-----LDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEIL 235
Query: 670 RNVPVTT-------KVDVFSFGVMLLEIICGR 694
           + V           + D ++ GV   E+  G+
Sbjct: 236 QAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 91/219 (41%), Gaps = 43/219 (19%)
Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN--EEFMTELKIIGRTHHKNLVR 551
           K +G+G+ G V      + D  +  A+KKL +  +     +    EL ++   +HKN++ 
Sbjct: 68  KPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 125
Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNF----LFHEGQRPGWVQRVEIALGVAR-------- 599
           LL                P  TL  F    L  E       Q +++ L   R        
Sbjct: 126 LLNV------------FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 173
Query: 600 --GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
             G+ +LH      IIH D+KP N++     + ++   KI DFG+++        T   +
Sbjct: 174 LCGIKHLHS---AGIIHRDLKPSNIV-----VKSDCTLKILDFGLARTAGTSFMMTPYVV 225
Query: 658 RGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRH 696
             T  Y APE +  +     VD++S G ++ E++   RH
Sbjct: 226 --TRYYRAPEVILGMGYKENVDIWSVGCIMGEMV---RH 259
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	788
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-116
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-105
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-102
3soc_A	322	Activin receptor type-2A; structural genomics cons	4e-68
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	4e-65
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	5e-64
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-63
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-63
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	7e-58
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-57
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	7e-57
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-56
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	4e-55
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-54
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-48
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-47
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-47
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-47
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-42
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-40
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-39
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-39
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	4e-39
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	6e-39
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-38
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-38
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	6e-38
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	6e-38
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-37
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	4e-37
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	7e-37
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	7e-37
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	7e-37
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	8e-37
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	9e-37
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-36
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-36
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-36
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-36
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	6e-36
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	8e-36
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	8e-36
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-35
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-35
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-35
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-35
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-35
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	5e-35
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	5e-35
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	6e-35
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	6e-35
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	7e-35
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	9e-35
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	9e-35
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-34
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-34
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-34
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-34
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	4e-34
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	7e-34
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-33
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-33
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-33
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-33
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	5e-33
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	8e-33
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	9e-33
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-32
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-32
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-32
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-32
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-32
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	4e-32
4aoj_A	329	High affinity nerve growth factor receptor; transf	6e-32
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	6e-32
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	6e-32
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	7e-32
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	8e-32
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	9e-32
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	9e-32
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-31
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	5e-31
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	5e-31
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	7e-30
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	8e-30
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-29
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-29
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-29
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-29
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-29
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-29
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-29
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	3e-29
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-29
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-29
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	4e-29
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	4e-29
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	6e-29
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	6e-29
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-28
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-28
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-28
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-28
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	4e-28
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	6e-28
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	7e-28
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-27
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-27
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-27
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-27
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-27
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-27
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-27
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-27
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-27
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	3e-27
3fme_A	290	Dual specificity mitogen-activated protein kinase;	6e-27
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	6e-27
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	6e-27
3aln_A	327	Dual specificity mitogen-activated protein kinase;	7e-27
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	9e-27
3ork_A	311	Serine/threonine protein kinase; structural genomi	9e-27
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-26
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-26
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-26
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-26
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-26
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-26
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-26
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	2e-26
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-26
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	3e-26
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-26
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-26
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	4e-26
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	4e-26
3bhy_A	283	Death-associated protein kinase 3; death associate	6e-26
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	7e-26
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	7e-26
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	9e-26
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	9e-26
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-25
2dyl_A	318	Dual specificity mitogen-activated protein kinase	5e-25
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	8e-25
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	8e-25
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-24
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-24
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-24
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-24
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	4e-24
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	5e-24
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	7e-24
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	8e-24
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-23
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-23
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	3e-23
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	4e-23
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	4e-23
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	6e-23
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	8e-23
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	9e-23
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-22
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	6e-22
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	7e-22
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	9e-22
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	4e-21
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	4e-21
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	5e-21
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	5e-21
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	6e-21
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	7e-21
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	8e-21
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	8e-21
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-20
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-20
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-20
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-20
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	3e-20
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	4e-20
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	4e-20
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	6e-20
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	6e-20
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	1e-19
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	5e-19
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	8e-19
3uqc_A	286	Probable conserved transmembrane protein; structur	7e-18
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-17
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-17
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-17
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-17
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-17
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	4e-17
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	4e-17
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	5e-17
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	6e-17
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	9e-17
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	9e-17
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	8e-16
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	2e-06
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-15
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-15
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-15
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-15
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	8e-15
3niz_A	311	Rhodanese family protein; structural genomics, str	9e-15
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-14
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-14
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-14
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	4e-14
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	8e-14
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-13
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-13
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	3e-13
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	3e-13
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	7e-13
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-12
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-12
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-12
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-12
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-12
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-12
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	8e-12
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-11
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	4e-10
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	3e-11
3rp9_A	458	Mitogen-activated protein kinase; structural genom	4e-11
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	4e-11
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	4e-11
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	1e-10
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	5e-07
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-10
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	3e-10
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	5e-10
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	1e-06
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	8e-10
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	1e-06
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	1e-09
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	3e-07
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	2e-09
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	7e-05
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	3e-09
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	4e-07
1kj1_A	109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	4e-09
1kj1_A	109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	9e-08
1kj1_A	109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	4e-05
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	1e-08
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	8e-08
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	5e-08
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	7e-08
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	1e-07
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	1e-07
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	7e-07
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	4e-06
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	3e-05
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	7e-07
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	2e-06
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	7e-06
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	2e-05
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	9e-06
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	9e-06
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	1e-05
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	1e-05
2vse_A	841	MTX holotoxin, mosquitocidal toxin; ADP-ribosyltra	5e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  352 bits (906), Expect = e-116
 Identities = 122/315 (38%), Positives = 183/315 (58%), Gaps = 25/315 (7%)

Query: 469 DPNSMEINFREFTFQELQEATKGFSK--LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD 526
           DP       + F+ +ELQ A+  FS   ++G G  GKVY+G  RL D    +AVK+L+++
Sbjct: 9   DPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKG--RLADGT-LVAVKRLKEE 65

Query: 527 IEKTNE-EFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP 585
             +  E +F TE+++I    H+NL+RL GFC    +RLLVY  M NG++++ L    +  
Sbjct: 66  RTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR--ERPE 123

Query: 586 G-----WVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF 640
                 W +R  IALG ARGL YLH+ C+ +IIH D+K  N+LLD       + A + DF
Sbjct: 124 SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD-----EEFEAVVGDF 178

Query: 641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELS 700
           G++KL++   T   T +RGT+G++APE+L     + K DVF +GVMLLE+I G+R  +L+
Sbjct: 179 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLA 238

Query: 701 RVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLS--DLERFERMAMVGLWCNHPDP 758
           R+  +    D++L DWV   +  + L+ LV  D ++      E  E++  V L C    P
Sbjct: 239 RLANDD---DVMLLDWVKGLLKEKKLEALV--DVDLQGNYKDEEVEQLIQVALLCTQSSP 293

Query: 759 NLRPSMKKVIHMLEG 773
             RP M +V+ MLEG
Sbjct: 294 MERPKMSEVVRMLEG 308

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  324 bits (832), Expect = e-105
 Identities = 110/316 (34%), Positives = 162/316 (51%), Gaps = 26/316 (8%)

Query: 470 PNSMEINFREFTFQELQEATKGFSK--LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI 527
              +          +L+EAT  F    L+G G  GKVY+G+LR  D   ++A+K+   + 
Sbjct: 19  SYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR--DGA-KVALKRRTPES 75

Query: 528 EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPG- 586
            +  EEF TE++ +    H +LV L+GFC E ++ +L+Y+ M NG L   L+        
Sbjct: 76  SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS 135

Query: 587 --WVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK 644
             W QR+EI +G ARGL YLH      IIH D+K  N+L     LD N++ KI+DFGISK
Sbjct: 136 MSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINIL-----LDENFVPKITDFGISK 187

Query: 645 L-LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVE 703
                DQT   T ++GT+GY+ PE+     +T K DV+SFGV+L E++C R  I  S   
Sbjct: 188 KGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR 247

Query: 704 EESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLS--DLERFERMAMVGLWCNHPDPNLR 761
           E      + L++W +    +  L+ +V  DP +      E   +     + C       R
Sbjct: 248 EM-----VNLAEWAVESHNNGQLEQIV--DPNLADKIRPESLRKFGDTAVKCLALSSEDR 300

Query: 762 PSMKKVIHMLEGTLEV 777
           PSM  V+  LE  L +
Sbjct: 301 PSMGDVLWKLEYALRL 316

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  317 bits (814), Expect = e-102
 Identities = 109/323 (33%), Positives = 158/323 (48%), Gaps = 41/323 (12%)

Query: 469 DPNSMEINFREFTFQELQEATKGFSK--------LVGTGSSGKVYRGILRLKDTQIEIAV 520
                +  F  F+F EL+  T  F +         +G G  G VY+G +   +    +AV
Sbjct: 4   SLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV---NNT-TVAV 59

Query: 521 KKLEKDIEKT----NEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSN 576
           KKL   ++ T     ++F  E+K++ +  H+NLV LLGF S+ D   LVY  MPNG+L +
Sbjct: 60  KKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLD 119

Query: 577 FLFHEGQRPG--WVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM 634
            L      P   W  R +IA G A G+ +LHE      IH DIK  N+L     LD  + 
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANIL-----LDEAFT 171

Query: 635 AKISDFGISKLL-NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           AKISDFG+++      QT   + + GT  Y+APE LR   +T K D++SFGV+LLEII G
Sbjct: 172 AKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230

Query: 694 RRHIELSRVEEESEEVDIVLSDWVISCMLS-RNLQVLVSHDPEVLSD--LERFERMAMVG 750
              ++  R E +       L D         + ++  +  D + ++D      E M  V 
Sbjct: 231 LPAVDEHR-EPQL------LLDIKEEIEDEEKTIEDYI--DKK-MNDADSTSVEAMYSVA 280

Query: 751 LWCNHPDPNLRPSMKKVIHMLEG 773
             C H   N RP +KKV  +L+ 
Sbjct: 281 SQCLHEKKNKRPDIKKVQQLLQE 303

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  227 bits (580), Expect = 4e-68
 Identities = 67/320 (20%), Positives = 119/320 (37%), Gaps = 42/320 (13%)

Query: 478 REFTFQELQEATKGFS--KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFM 535
            +   + L   +      ++   G  G V++  L        +AVK      +K + +  
Sbjct: 12  VDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLL----NEYVAVKIFPIQ-DKQSWQNE 66

Query: 536 TELKIIGRTHHKNLVRLLGFCSEEDK----RLLVYELMPNGTLSNFLFHEGQRPGWVQRV 591
            E+  +    H+N+++ +G             L+      G+LS+FL        W +  
Sbjct: 67  YEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA--NVVSWNELC 124

Query: 592 EIALGVARGLLYLHEECETQ-------IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK 644
            IA  +ARGL YLHE+           I H DIK +NVLL       N  A I+DFG++ 
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLK-----NNLTACIADFGLAL 179

Query: 645 LLNKDQTRTDTNMR-GTMGYVAPEWLR-----NVPVTTKVDVFSFGVMLLEIICGRRHIE 698
                ++  DT+ + GT  Y+APE L            ++D+++ G++L E+        
Sbjct: 180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCT--- 236

Query: 699 LSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHD------PEVLSDLERFERMAMVGLW 752
               +   +E  +   + +       ++Q +V H        +          +      
Sbjct: 237 --AADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEE 294

Query: 753 CNHPDPNLRPSMKKVIHMLE 772
           C   D   R S   V   + 
Sbjct: 295 CWDHDAEARLSAGCVGERIT 314

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  218 bits (558), Expect = 4e-65
 Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 49/302 (16%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE 533
            I+++E   +E+          VG G+ G V +   R      ++A+K++E   E   + 
Sbjct: 4   MIDYKEIEVEEV----------VGRGAFGVVCKAKWR----AKDVAIKQIES--ESERKA 47

Query: 534 FMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPG--WVQRV 591
           F+ EL+ + R +H N+V+L G C   +   LV E    G+L N L      P       +
Sbjct: 48  FIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAM 105

Query: 592 EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT 651
              L  ++G+ YLH      +IH D+KP N+LL         + KI DFG +     D  
Sbjct: 106 SWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV----AGGTVLKICDFGTAC----DIQ 157

Query: 652 RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI 711
              TN +G+  ++APE       + K DVFS+G++L E+I  R+  +           +I
Sbjct: 158 THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD-----------EI 206

Query: 712 VLSDWVISCMLSRNLQ-VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM 770
               + I   +    +  L+ + P+ +  L       M   W    DP+ RPSM++++ +
Sbjct: 207 GGPAFRIMWAVHNGTRPPLIKNLPKPIESL-------MTRCW--SKDPSQRPSMEEIVKI 257

Query: 771 LE 772
           + 
Sbjct: 258 MT 259

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  215 bits (550), Expect = 5e-64
 Identities = 76/322 (23%), Positives = 142/322 (44%), Gaps = 53/322 (16%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKL--EKDIEKTN 531
           +I + +   +E           +G GS G V+R          ++AVK L  +    +  
Sbjct: 33  DIPWCDLNIKEK----------IGAGSFGTVHRAEWH----GSDVAVKILMEQDFHAERV 78

Query: 532 EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP--GWVQ 589
            EF+ E+ I+ R  H N+V  +G  ++     +V E +  G+L   L   G R      +
Sbjct: 79  NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR 138

Query: 590 RVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
           R+ +A  VA+G+ YLH      I+H ++K  N+L+D       Y  K+ DFG+S+L    
Sbjct: 139 RLSMAYDVAKGMNYLHN-RNPPIVHRNLKSPNLLVD-----KKYTVKVCDFGLSRLKAST 192

Query: 650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR---RHIELSRVEEES 706
              +  +  GT  ++APE LR+ P   K DV+SFGV+L E+   +    ++  ++     
Sbjct: 193 FL-SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ----- 246

Query: 707 EEVDIVLSDWVISCMLSRNLQVLVSHD-PEVLSDLERFERMAMVGLWCNHPDPNLRPSMK 765
                     V++ +  +  ++ +  +    ++ +       + G W    +P  RPS  
Sbjct: 247 ----------VVAAVGFKCKRLEIPRNLNPQVAAI-------IEGCW--TNEPWKRPSFA 287

Query: 766 KVIHMLEGTLEVGMPPLLHDQM 787
            ++ +L   ++  +PP     +
Sbjct: 288 TIMDLLRPLIKSAVPPPNRSDL 309

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  213 bits (544), Expect = 1e-63
 Identities = 88/310 (28%), Positives = 136/310 (43%), Gaps = 54/310 (17%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKL----EKDIEK 529
           EI+F E T +E+          +G G  GKVYR          E+AVK      ++DI +
Sbjct: 3   EIDFAELTLEEI----------IGIGGFGKVYRAFWI----GDEVAVKAARHDPDEDISQ 48

Query: 530 TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQ 589
           T E    E K+     H N++ L G C +E    LV E    G L+  L   G+R     
Sbjct: 49  TIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL--SGKRIPPDI 106

Query: 590 RVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLD---LKTLDTNYMAKISDFGISKLL 646
            V  A+ +ARG+ YLH+E    IIH D+K  N+L+         +N + KI+DFG+++  
Sbjct: 107 LVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW 166

Query: 647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR---RHIELSRVE 703
           ++    +     G   ++APE +R    +   DV+S+GV+L E++ G    R I+     
Sbjct: 167 HRTTKMSAA---GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA-- 221

Query: 704 EESEEVDIVLSDWVISCMLSRNLQVLVSHD-PEVLSDLERFERMAMVGLWCNHPDPNLRP 762
                        V   +    L + +    PE  + L       M   W  +PDP+ RP
Sbjct: 222 -------------VAYGVAMNKLALPIPSTCPEPFAKL-------MEDCW--NPDPHSRP 259

Query: 763 SMKKVIHMLE 772
           S   ++  L 
Sbjct: 260 SFTNILDQLT 269

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  212 bits (543), Expect = 2e-63
 Identities = 65/312 (20%), Positives = 124/312 (39%), Gaps = 54/312 (17%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKL-------EKD 526
            +   E  +++           +G G  G V++G L    +   +A+K L       E +
Sbjct: 15  TLADNEIEYEKQ----------IGKGGFGLVHKGRLVKDKS--VVAIKSLILGDSEGETE 62

Query: 527 IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPG 586
           + +  +EF  E+ I+   +H N+V+L G         +V E +P G L + L  +     
Sbjct: 63  MIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIK 120

Query: 587 WVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL 646
           W  ++ + L +A G+ Y+       I+H D++  N+ L     +    AK++DFG+S   
Sbjct: 121 WSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS--- 176

Query: 647 NKDQTRTDTNMRGTMGYVAPEWL--RNVPVTTKVDVFSFGVMLLEIICGR---RHIELSR 701
            +    + + + G   ++APE +       T K D +SF ++L  I+ G          +
Sbjct: 177 -QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK 235

Query: 702 VEEESEEVDIVLSDWVISCMLSRNLQVLVSHD-PEVLSDLERFERMAMVGLWCNHPDPNL 760
           +               I+ +    L+  +  D P  L ++       +   W    DP  
Sbjct: 236 I-------------KFINMIREEGLRPTIPEDCPPRLRNV-------IELCW--SGDPKK 273

Query: 761 RPSMKKVIHMLE 772
           RP    ++  L 
Sbjct: 274 RPHFSYIVKELS 285

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  198 bits (506), Expect = 7e-58
 Identities = 71/322 (22%), Positives = 123/322 (38%), Gaps = 72/322 (22%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE 533
                +    E+          +G G  G+  +   R  +T   + +K+L +  E+T   
Sbjct: 6   IFRPSDLIHGEV----------LGKGCFGQAIKVTHR--ETGEVMVMKELIRFDEETQRT 53

Query: 534 FMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEI 593
           F+ E+K++    H N+++ +G   ++ +   + E +  GTL   +     +  W QRV  
Sbjct: 54  FLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSF 113

Query: 594 ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT 653
           A  +A G+ YLH      IIH D+   N L+       N    ++DFG+++L+  ++T+ 
Sbjct: 114 AKDIASGMAYLHSM---NIIHRDLNSHNCLVR-----ENKNVVVADFGLARLMVDEKTQP 165

Query: 654 D-------------TNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELS 700
           +               + G   ++APE +       KVDVFSFG++L EII         
Sbjct: 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVN----- 220

Query: 701 RVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVG---------- 750
                                L R +   +        ++  F                 
Sbjct: 221 ----------------ADPDYLPRTMDFGL--------NVRGFLDRYCPPNCPPSFFPIT 256

Query: 751 LWCNHPDPNLRPSMKKVIHMLE 772
           + C   DP  RPS  K+ H LE
Sbjct: 257 VRCCDLDPEKRPSFVKLEHWLE 278

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  196 bits (501), Expect = 1e-57
 Identities = 67/310 (21%), Positives = 117/310 (37%), Gaps = 60/310 (19%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKL--EKDIEKTN 531
            I+F++  F             +    SG++++G  +      +I VK L       + +
Sbjct: 6   GIDFKQLNFLTK----------LNENHSGELWKGRWQ----GNDIVVKVLKVRDWSTRKS 51

Query: 532 EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL--VYELMPNGTLSNFLFHEGQRPG--W 587
            +F  E   +    H N++ +LG C          +   MP G+L N L HEG       
Sbjct: 52  RDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVL-HEGTNFVVDQ 110

Query: 588 VQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
            Q V+ AL +ARG+ +LH   E  I    +  ++V+     +D +  A+IS   +     
Sbjct: 111 SQAVKFALDMARGMAFLH-TLEPLIPRHALNSRSVM-----IDEDMTARISMADVKF--- 161

Query: 648 KDQTRTDTNMRGTMGYVAPEWLRNVP---VTTKVDVFSFGVMLLEIICGRR-HIELSRVE 703
              +           +VAPE L+  P        D++SF V+L E++       +LS +E
Sbjct: 162 ---SFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME 218

Query: 704 EESEEVDIVLSDWVISCMLSRNLQVLVSHD-PEVLSDLERFERMAMVGLWCNHPDPNLRP 762
                        +   +    L+  +       +S L       M      + DP  RP
Sbjct: 219 -------------IGMKVALEGLRPTIPPGISPHVSKL-------MKICM--NEDPAKRP 256

Query: 763 SMKKVIHMLE 772
               ++ +LE
Sbjct: 257 KFDMIVPILE 266

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  196 bits (500), Expect = 7e-57
 Identities = 64/317 (20%), Positives = 117/317 (36%), Gaps = 65/317 (20%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKL--EKDIEKTN 531
           +I F +    EL          +G G  G+VY G         E+A++ +  E+D E   
Sbjct: 29  DIPFEQLEIGEL----------IGKGRFGQVYHGRWH-----GEVAIRLIDIERDNEDQL 73

Query: 532 EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV 591
           + F  E+    +T H+N+V  +G C       ++  L    TL + +          +  
Sbjct: 74  KAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR 133

Query: 592 EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK--- 648
           +IA  + +G+ YLH +    I+H D+K +NV  D   +       I+DFG+  +      
Sbjct: 134 QIAQEIVKGMGYLHAK---GILHKDLKSKNVFYDNGKV------VITDFGLFSISGVLQA 184

Query: 649 -DQTRTDTNMRGTMGYVAPEWLRNV---------PVTTKVDVFSFGVMLLEIICGR---R 695
             +        G + ++APE +R +         P +   DVF+ G +  E+       +
Sbjct: 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK 244

Query: 696 HIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNH 755
                 +             W +   + +     +    E+   L            C  
Sbjct: 245 TQPAEAII------------WQMGTGM-KPNLSQIGMGKEISDILLF----------CWA 281

Query: 756 PDPNLRPSMKKVIHMLE 772
            +   RP+  K++ MLE
Sbjct: 282 FEQEERPTFTKLMDMLE 298

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  196 bits (500), Expect = 1e-56
 Identities = 74/339 (21%), Positives = 117/339 (34%), Gaps = 61/339 (17%)

Query: 468 FDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI 527
              +   ++       EL          +G G  G VY+G L     +  +AVK      
Sbjct: 3   AAASEPSLDLDNLKLLEL----------IGRGRYGAVYKGSLD----ERPVAVKVFSFAN 48

Query: 528 EKTNEEFMTELKI--IGRTHHKNLVRLLGFCSE-----EDKRLLVYELMPNGTLSNFLFH 580
            +    F+ E  I  +    H N+ R +            + LLV E  PNG+L  +L  
Sbjct: 49  RQ---NFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL 105

Query: 581 EGQRPGWVQRVEIALGVARGLLYLHEE------CETQIIHCDIKPQNVLLDLKTLDTNYM 634
                 WV    +A  V RGL YLH E       +  I H D+  +NVL     +  +  
Sbjct: 106 --HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVL-----VKNDGT 158

Query: 635 AKISDFGISKLL-------NKDQTRTDTNMRGTMGYVAPEWLRNV-------PVTTKVDV 680
             ISDFG+S  L         ++     +  GT+ Y+APE L              +VD+
Sbjct: 159 CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDM 218

Query: 681 FSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHD------- 733
           ++ G++  EI             E   E  +     V +     ++QVLVS +       
Sbjct: 219 YALGLIYWEIFMRC---TDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFP 275

Query: 734 PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
                +      +      C   D   R + +     + 
Sbjct: 276 EAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  189 bits (482), Expect = 1e-54
 Identities = 66/307 (21%), Positives = 134/307 (43%), Gaps = 50/307 (16%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKL--EKDIEKTN 531
           EI   + T  +           +G+GS G VY+G         ++AVK L       +  
Sbjct: 20  EIPDGQITVGQR----------IGSGSFGTVYKGKWH-----GDVAVKMLNVTAPTPQQL 64

Query: 532 EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV 591
           + F  E+ ++ +T H N++  +G+ +   +  +V +     +L + L     +    + +
Sbjct: 65  QAFKNEVGVLRKTRHVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLI 123

Query: 592 EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ- 650
           +IA   ARG+ YLH +    IIH D+K  N+      L  +   KI DFG++   ++   
Sbjct: 124 DIARQTARGMDYLHAK---SIIHRDLKSNNIF-----LHEDNTVKIGDFGLATEKSRWSG 175

Query: 651 TRTDTNMRGTMGYVAPEWLRN---VPVTTKVDVFSFGVMLLEIICGRR-HIELSRVEEES 706
           +     + G++ ++APE +R     P + + DV++FG++L E++ G+  +  ++  ++  
Sbjct: 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-- 233

Query: 707 EEVDIVLSDWVISCMLSRNLQVLVSHD-PEVLSDLERFERMAMVGLWCNHPDPNLRPSMK 765
               I+    ++           V  + P+ +  L     M      C     + RPS  
Sbjct: 234 ----II---EMVGRGSLSPDLSKVRSNCPKRMKRL-----M----AECLKKKRDERPSFP 277

Query: 766 KVIHMLE 772
           +++  +E
Sbjct: 278 RILAEIE 284

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  171 bits (434), Expect = 2e-47
 Identities = 64/323 (19%), Positives = 115/323 (35%), Gaps = 52/323 (16%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE 533
               ++    +           +G G  G+V+ G  R      ++AVK      E+ +  
Sbjct: 33  RTIAKQIQMVKQ----------IGKGRYGEVWMGKWR----GEKVAVKVF-FTTEEASWF 77

Query: 534 FMTELKIIGRTHHKNLVRLLGFCSEEDKR----LLVYELMPNGTLSNFLFHEGQRPGWVQ 589
             TE+       H+N++  +    +         L+ +   NG+L ++L  +        
Sbjct: 78  RETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKS 135

Query: 590 RVEIALGVARGLLYLHEECETQ-----IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK 644
            +++A     GL +LH E  +      I H D+K +N+L     +  N    I+D G++ 
Sbjct: 136 MLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNIL-----VKKNGTCCIADLGLAV 190

Query: 645 LLNKDQTRTDTNM---RGTMGYVAPEWL------RNVPVTTKVDVFSFGVMLLEIICGRR 695
               D    D       GT  Y+ PE L       +       D++SFG++L E+     
Sbjct: 191 KFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR-- 248

Query: 696 HIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHD------PEVLSDLERFERMAMV 749
                      EE  +   D V S     +++ +V         P   S  E   +M  +
Sbjct: 249 ----CVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKL 304

Query: 750 GLWCNHPDPNLRPSMKKVIHMLE 772
              C   +P  R +  +V   L 
Sbjct: 305 MTECWAHNPASRLTALRVKKTLA 327

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  169 bits (431), Expect = 2e-47
 Identities = 63/305 (20%), Positives = 116/305 (38%), Gaps = 42/305 (13%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
             + VG G  G+V+RG  +       +AVK      ++ +    TEL       H+N++ 
Sbjct: 12  LLECVGKGRYGEVWRGSWQ----GENVAVKIF-SSRDEKSWFRETELYNTVMLRHENILG 66

Query: 552 LLGFCSEEDKR----LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            +              L+      G+L ++L  +      V  + I L +A GL +LH E
Sbjct: 67  FIASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIE 124

Query: 608 CETQ-----IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM---RG 659
                    I H D+K +N+L     +  N    I+D G++ + ++   + D       G
Sbjct: 125 IFGTQGKPAIAHRDLKSKNIL-----VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVG 179

Query: 660 TMGYVAPEWLRNVPVTT------KVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL 713
           T  Y+APE L             +VD+++FG++L E+                E+     
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR------MVSNGIVEDYKPPF 233

Query: 714 SDWVISCMLSRNLQVLVSHD------PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKV 767
            D V +     +++ +V  D      P           +A +   C + +P+ R +  ++
Sbjct: 234 YDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 293

Query: 768 IHMLE 772
              L 
Sbjct: 294 KKTLT 298

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  170 bits (433), Expect = 3e-47
 Identities = 63/307 (20%), Positives = 115/307 (37%), Gaps = 46/307 (14%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
             + +G G  G+V+RG  R      E+AVK      E+ +     E+       H+N++ 
Sbjct: 46  LQESIGKGRFGEVWRGKWR----GEEVAVKIF-SSREERSWFREAEIYQTVMLRHENILG 100

Query: 552 LLGFCSEEDKR----LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            +   ++++       LV +   +G+L ++L            +++AL  A GL +LH E
Sbjct: 101 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHME 158

Query: 608 CETQ-----IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM---RG 659
                    I H D+K +N+L     +  N    I+D G++   +      D       G
Sbjct: 159 IVGTQGKPAIAHRDLKSKNIL-----VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 213

Query: 660 TMGYVAPEWLRN------VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL 713
           T  Y+APE L +           + D+++ G++  EI           +    E+  +  
Sbjct: 214 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR------CSIGGIHEDYQLPY 267

Query: 714 SDWVISCMLSRNLQVLVSHD------PEVLSDLERFERMA--MVGLWCNHPDPNLRPSMK 765
            D V S      ++ +V         P      E    MA  M   W  + +   R +  
Sbjct: 268 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECW--YANGAARLTAL 325

Query: 766 KVIHMLE 772
           ++   L 
Sbjct: 326 RIKKTLS 332

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  158 bits (401), Expect = 2e-42
 Identities = 76/365 (20%), Positives = 130/365 (35%), Gaps = 100/365 (27%)

Query: 439 FSAICALLSGVAAIYYSPAARGLIKR-----RNYFDPNSMEINFREFTFQELQEATKGFS 493
           F +I  L+      +     + L K+           +   +N  +              
Sbjct: 75  FPSIPLLID-----HLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDLVLG---------- 119

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRL 552
           + +G G+ G+V+ G LR  +T +  AVK   + +      +F+ E +I+ +  H N+VRL
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLV--AVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQI 612
           +G C+++    +V EL+  G    FL  EG R      +++    A G+ YL  +     
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CC 234

Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV-----APE 667
           IH D+  +N L     +    + KISDFG+S+              G +  V     APE
Sbjct: 235 IHRDLAARNCL-----VTEKNVLKISDFGMSREEADG----VYAASGGLRQVPVKWTAPE 285

Query: 668 WLRNVPVTTKVDVFSFGVMLLEII-CGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL 726
            L     +++ DV+SFG++L E    G                                 
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFSLGAS------------------------------- 314

Query: 727 QVLVSHDP-------EVLSDLERFERMA------------MVGLWCNHPDPNLRPSMKKV 767
                  P       +    +E+  R+             M    C   +P  RPS   +
Sbjct: 315 -------PYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLM--EQCWAYEPGQRPSFSTI 365

Query: 768 IHMLE 772
              L+
Sbjct: 366 YQELQ 370

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  154 bits (392), Expect = 2e-40
 Identities = 81/337 (24%), Positives = 135/337 (40%), Gaps = 60/337 (17%)

Query: 453 YYSPAARGLIKRRNYFDPNSMEINFREFTFQ----ELQEATKGFSKLVGTGSSGKVYRGI 508
           ++S  A GLI   +Y  P   +      +      E++         +G G  G+VY G 
Sbjct: 181 HHSTVADGLITTLHYPAPKRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEG- 239

Query: 509 LRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL 568
              K   + +AVK L K+     EEF+ E  ++    H NLV+LLG C+ E    ++ E 
Sbjct: 240 -VWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297

Query: 569 MPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLK 627
           M  G L ++L     Q    V  + +A  ++  + YL ++     IH ++  +N L    
Sbjct: 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCL---- 350

Query: 628 TLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVML 687
            +  N++ K++DFG+S+L+  D        +  + + APE L     + K DV++FGV+L
Sbjct: 351 -VGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 409

Query: 688 LEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMA 747
            EI         +        +D                        +V   LE+  RM 
Sbjct: 410 WEIA--------TYGMSPYPGID----------------------LSQVYELLEKDYRME 439

Query: 748 ------------MVGLWCNHPDPNLRPSMKKVIHMLE 772
                       M    C   +P+ RPS  ++    E
Sbjct: 440 RPEGCPEKVYELM--RACWQWNPSDRPSFAEIHQAFE 474

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  147 bits (373), Expect = 1e-39
 Identities = 66/299 (22%), Positives = 126/299 (42%), Gaps = 43/299 (14%)

Query: 492 FSKLVGTGSSGKVYRGILRL--KDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNL 549
           F + +G G+ G V          +T   +AVKKL+   E+   +F  E++I+    H N+
Sbjct: 14  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73

Query: 550 VRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           V+  G C    +R   L+ E +P G+L ++L    +R   ++ ++    + +G+ YL  +
Sbjct: 74  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 133

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVA 665
              + IH D+  +N+L     ++     KI DFG++K+L  +K+  +        + + A
Sbjct: 134 ---RYIHRDLATRNIL-----VENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA 185

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN 725
           PE L     +   DV+SFGV+L E+               +              M+  +
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELF--------------TYIEKSKSPPAEFMRMIGND 231

Query: 726 LQVLVSHDPEVLSDLERFERMA------------MVGLWCNHPDPNLRPSMKKVIHMLE 772
            Q  +     ++  L+   R+             M   W  + + N RPS + +   ++
Sbjct: 232 KQGQMIV-FHLIELLKNNGRLPRPDGCPDEIYMIMTECW--NNNVNQRPSFRDLALRVD 287

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  146 bits (371), Expect = 2e-39
 Identities = 67/330 (20%), Positives = 127/330 (38%), Gaps = 59/330 (17%)

Query: 463 KRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL--KDTQIEIAV 520
           K     DP       R               + +G G  GKV          +T  ++AV
Sbjct: 8   KPATEVDPT--HFEKRFLKRI----------RDLGEGHFGKVELCRYDPEGDNTGEQVAV 55

Query: 521 KKL-EKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLSNF 577
           K L  +       +   E++I+   +H+N+V+  G C+E+      L+ E +P+G+L  +
Sbjct: 56  KSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEY 115

Query: 578 LFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI 637
           L     +    Q+++ A+ + +G+ YL      Q +H D+  +NVL     +++ +  KI
Sbjct: 116 LPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVL-----VESEHQVKI 167

Query: 638 SDFGISKLL--NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII-CGR 694
            DFG++K +  +K+      +    + + APE L         DV+SFGV L E++    
Sbjct: 168 GDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCD 227

Query: 695 RHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMA------- 747
                  +  +            ++                +++ L+  +R+        
Sbjct: 228 SDSSPMALFLKMIGPTH----GQMT-------------VTRLVNTLKEGKRLPCPPNCPD 270

Query: 748 -----MVGLWCNHPDPNLRPSMKKVIHMLE 772
                M   W     P+ R S + +I   E
Sbjct: 271 EVYQLMRKCW--EFQPSNRTSFQNLIEGFE 298

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  147 bits (372), Expect = 4e-39
 Identities = 70/330 (21%), Positives = 136/330 (41%), Gaps = 43/330 (13%)

Query: 461 LIKRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL--KDTQIEI 518
           +    N +   +M   F +    + +E    F + +G G+ G V          +T   +
Sbjct: 14  IPTTENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVV 73

Query: 519 AVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR--LLVYELMPNGTLSN 576
           AVKKL+   E+   +F  E++I+    H N+V+  G C    +R   L+ E +P G+L +
Sbjct: 74  AVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD 133

Query: 577 FLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAK 636
           +L    +R   ++ ++    + +G+ YL  +   + IH D+  +N+L     ++     K
Sbjct: 134 YLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL-----VENENRVK 185

Query: 637 ISDFGISKLL--NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           I DFG++K+L  +K+  +        + + APE L     +   DV+SFGV+L E+    
Sbjct: 186 IGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF--- 242

Query: 695 RHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMA------- 747
                      +              M+  + Q  +     ++  L+   R+        
Sbjct: 243 -----------TYIEKSKSPPAEFMRMIGNDKQGQMIV-FHLIELLKNNGRLPRPDGCPD 290

Query: 748 -----MVGLWCNHPDPNLRPSMKKVIHMLE 772
                M   W  + + N RPS + +   ++
Sbjct: 291 EIYMIMTECW--NNNVNQRPSFRDLALRVD 318

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  146 bits (370), Expect = 6e-39
 Identities = 67/301 (22%), Positives = 120/301 (39%), Gaps = 48/301 (15%)

Query: 492 FSKLVGTGSSGKVYRGILRL--KDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNL 549
           +   +G G+ G V          +T   +AVK+L+        +F  E++I+   H   +
Sbjct: 27  YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 86

Query: 550 VRLLGFCSEEDKR--LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           V+  G      ++   LV E +P+G L +FL     R    + +  +  + +G+ YL   
Sbjct: 87  VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR 146

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVA 665
              + +H D+  +N+L     +++    KI+DFG++KLL  +KD        +  + + A
Sbjct: 147 ---RCVHRDLAARNIL-----VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA 198

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEII--CGRRHIELSRVEEESEEVDIVLSDWVISCMLS 723
           PE L +   + + DV+SFGV+L E+   C +     +           V +         
Sbjct: 199 PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPA--------- 249

Query: 724 RNLQVLVSHDPEVLSDLERFERMA------------MVGLWCNHPDPNLRPSMKKVIHML 771
                       +L  LE  +R+             M   W   P P  RPS   +   L
Sbjct: 250 ---------LSRLLELLEEGQRLPAPPACPAEVHELMKLCW--APSPQDRPSFSALGPQL 298

Query: 772 E 772
           +
Sbjct: 299 D 299

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  148 bits (376), Expect = 1e-38
 Identities = 81/335 (24%), Positives = 133/335 (39%), Gaps = 61/335 (18%)

Query: 453 YYSPAARGLIKRRNYFDPNSMEINFREFTFQ-ELQEATKGFSKLVGTGSSGKVYRGILRL 511
           YYS  A GL  R     P S            E+   +      +G G  G+V+ G    
Sbjct: 148 YYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN- 206

Query: 512 KDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPN 571
                 +A+K L K    + E F+ E +++ +  H+ LV+L    SEE    +V E M  
Sbjct: 207 --GTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSK 262

Query: 572 GTLSNFL-FHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD 630
           G+L +FL    G+     Q V++A  +A G+ Y+        +H D++  N+L+      
Sbjct: 263 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG----- 314

Query: 631 TNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
            N + K++DFG+++L+  ++       +  + + APE       T K DV+SFG++L E+
Sbjct: 315 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374

Query: 691 I-CGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMA-- 747
              GR                       +              + EVL  +ER  RM   
Sbjct: 375 TTKGRVPY------------------PGMV-------------NREVLDQVERGYRMPCP 403

Query: 748 ----------MVGLWCNHPDPNLRPSMKKVIHMLE 772
                     M    C   +P  RP+ + +   LE
Sbjct: 404 PECPESLHDLM--CQCWRKEPEERPTFEYLQAFLE 436

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  150 bits (379), Expect = 1e-38
 Identities = 81/335 (24%), Positives = 133/335 (39%), Gaps = 61/335 (18%)

Query: 453 YYSPAARGLIKRRNYFDPNSMEINFREFTFQ-ELQEATKGFSKLVGTGSSGKVYRGILRL 511
           YYS  A GL  R     P S            E+   +      +G G  G+V+ G    
Sbjct: 231 YYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN- 289

Query: 512 KDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPN 571
                 +A+K L K    + E F+ E +++ +  H+ LV+L    SEE    +V E M  
Sbjct: 290 --GTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSK 345

Query: 572 GTLSNFL-FHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD 630
           G+L +FL    G+     Q V++A  +A G+ Y+        +H D++  N+L+      
Sbjct: 346 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG----- 397

Query: 631 TNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
            N + K++DFG+++L+  ++       +  + + APE       T K DV+SFG++L E+
Sbjct: 398 ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 457

Query: 691 I-CGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMA-- 747
              GR                       +              + EVL  +ER  RM   
Sbjct: 458 TTKGRVPY------------------PGMV-------------NREVLDQVERGYRMPCP 486

Query: 748 ----------MVGLWCNHPDPNLRPSMKKVIHMLE 772
                     M    C   +P  RP+ + +   LE
Sbjct: 487 PECPESLHDLM--CQCWRKEPEERPTFEYLQAFLE 519

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  143 bits (363), Expect = 6e-38
 Identities = 77/342 (22%), Positives = 139/342 (40%), Gaps = 65/342 (19%)

Query: 453 YYSPAARGLIKRRNYFDPNSME---INFREFTFQELQEATKGFSKLVGTGSSGKVYRGIL 509
           ++            YF             +FT  E+  +     K++G G  G+VY+G+L
Sbjct: 7   HHHHDYDIPTTENLYFQGAMGSDPNQAVLKFT-TEIHPSCVTRQKVIGAGEFGEVYKGML 65

Query: 510 RLKDTQIEI--AVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY 566
           +    + E+  A+K L     EK   +F+ E  I+G+  H N++RL G  S+    +++ 
Sbjct: 66  KTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT 125

Query: 567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDL 626
           E M NG L  FL  +      +Q V +  G+A G+ YL        +H D+  +N+L   
Sbjct: 126 EYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNIL--- 179

Query: 627 KTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV---APEWLRNVPVTTKVDVFSF 683
             +++N + K+SDFG+S++L +D         G    +   APE +     T+  DV+SF
Sbjct: 180 --VNSNLVCKVSDFGLSRVL-EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSF 236

Query: 684 GVMLLEII-CGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLER 742
           G+++ E++  G R                   +                 + EV+  +  
Sbjct: 237 GIVMWEVMTYGERPYW----------------EL---------------SNHEVMKAIND 265

Query: 743 FERMA------------MVGLWCNHPDPNLRPSMKKVIHMLE 772
             R+             M  + C   +   RP    ++ +L+
Sbjct: 266 GFRLPTPMDCPSAIYQLM--MQCWQQERARRPKFADIVSILD 305

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  142 bits (360), Expect = 6e-38
 Identities = 64/317 (20%), Positives = 115/317 (36%), Gaps = 73/317 (23%)

Query: 482 FQELQEATKGFSKLVGTGSSGKVYRGILRLKD-----TQIEIAVKKLEKDIEKTNEEFMT 536
           F +++     F++ +G G+  K+++G+ R         + E+ +K L+K     +E F  
Sbjct: 2   FHKIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE 61

Query: 537 ELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG 596
              ++ +  HK+LV   G C   D+ +LV E +  G+L  +L         + ++E+A  
Sbjct: 62  AASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQ 121

Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLL---DLKTLDTNYMAKISDFGISKLLNKDQTRT 653
           +A  + +L E     +IH ++  +N+LL   + +        K+SD GIS  +       
Sbjct: 122 LAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD--- 175

Query: 654 DTNMRGTMGY------VAPEWLRNVPV-TTKVDVFSFGVMLLEII-CGRRHIELSRVEEE 705
                           V PE + N        D +SFG  L EI   G +          
Sbjct: 176 --------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDK---------- 217

Query: 706 SEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMA----------MVGLWCNH 755
                  LS                      L   E   ++           +       
Sbjct: 218 ------PLSAL---------------DSQRKLQFYEDRHQLPAPKAAELANLINNCM--D 254

Query: 756 PDPNLRPSMKKVIHMLE 772
            +P+ RPS + +I  L 
Sbjct: 255 YEPDHRPSFRAIIRDLN 271

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  141 bits (359), Expect = 2e-37
 Identities = 68/299 (22%), Positives = 128/299 (42%), Gaps = 61/299 (20%)

Query: 492 FSKLVGTGSSGKVYRGILRL--KDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKN 548
             K++G+G+ G VY+G+     +  +I +A+K+L +    K N+E + E  ++    + +
Sbjct: 19  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 78

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           + RLLG C       L+ +LMP G L +++       G    +   + +A+G+ YL +  
Sbjct: 79  VCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV---A 665
              ++H D+  +NVL     + T    KI+DFG++KLL  ++        G    +   A
Sbjct: 138 ---LVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMA 187

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEII-CGRR-HIELSRVEEESEEVDIVLSDWVISCMLS 723
            E + +   T + DV+S+GV + E++  G + +  +                        
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP----------------------- 224

Query: 724 RNLQVLVSHDPEVLSDLERFERMA----------MVGLWCNHPDPNLRPSMKKVIHMLE 772
                      E+ S LE+ ER+           M+   C   D + RP  +++I    
Sbjct: 225 ---------ASEISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFS 274

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  140 bits (356), Expect = 4e-37
 Identities = 85/356 (23%), Positives = 145/356 (40%), Gaps = 86/356 (24%)

Query: 446 LSGVAAIYYSPAARGLIKRRNYFDPNSMEINF-REFTFQELQEATKGFSKLVGTGSSGKV 504
              +      P  +   +   Y +P     +F RE     +        K++G+G SG+V
Sbjct: 11  RENLYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIH-----IEKIIGSGDSGEV 65

Query: 505 YRGILRLKD-TQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR 562
             G LR+     + +A+K L+    E+   +F++E  I+G+  H N++RL G  +     
Sbjct: 66  CYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125

Query: 563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNV 622
           ++V E M NG+L  FL     +   +Q V +  GV  G+ YL +      +H D+  +NV
Sbjct: 126 MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNV 182

Query: 623 LLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG------TMGYVAPEWLRNVPVTT 676
           L     +D+N + K+SDFG+S++L  D     T   G      T    APE +     ++
Sbjct: 183 L-----VDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWT----APEAIAFRTFSS 233

Query: 677 KVDVFSFGVMLLEII-CGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDP- 734
             DV+SFGV++ E++  G R                                      P 
Sbjct: 234 ASDVWSFGVVMWEVLAYGER--------------------------------------PY 255

Query: 735 ------EVLSDLERFERMA------------MVGLWCNHPDPNLRPSMKKVIHMLE 772
                 +V+S +E   R+             M+  W  H D   RP   +++ +L+
Sbjct: 256 WNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCW--HKDRAQRPRFSQIVSVLD 309

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  141 bits (358), Expect = 7e-37
 Identities = 80/336 (23%), Positives = 145/336 (43%), Gaps = 66/336 (19%)

Query: 456 PAARGLIKRRNYFDPNSMEINF-REFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKD- 513
           P  R  +    + DP      F +E     +        K+VG G  G+V  G L+L   
Sbjct: 17  PGLRTFVDPHTFEDPTQTVHEFAKELDATNIS-----IDKVVGAGEFGEVCSGRLKLPSK 71

Query: 514 TQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG 572
            +I +A+K L+    EK   +F+ E  I+G+  H N++RL G  ++    ++V E M NG
Sbjct: 72  KEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131

Query: 573 TLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTN 632
           +L +FL     +   +Q V +  G+A G+ YL +      +H D+  +N+L     +++N
Sbjct: 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNIL-----INSN 183

Query: 633 YMAKISDFGISKLLNKDQTRTDTNMRGTMGYV---APEWLRNVPVTTKVDVFSFGVMLLE 689
            + K+SDFG+ ++L +D        RG    +   +PE +     T+  DV+S+G++L E
Sbjct: 184 LVCKVSDFGLGRVL-EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWE 242

Query: 690 II-CGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMA- 747
           ++  G R                   +                 + +V+  ++   R+  
Sbjct: 243 VMSYGERPYW----------------EM---------------SNQDVIKAVDEGYRLPP 271

Query: 748 -----------MVGLWCNHPDPNLRPSMKKVIHMLE 772
                      M  L C   D N RP  ++++ +L+
Sbjct: 272 PMDCPAALYQLM--LDCWQKDRNNRPKFEQIVSILD 305

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  140 bits (354), Expect = 7e-37
 Identities = 70/340 (20%), Positives = 125/340 (36%), Gaps = 59/340 (17%)

Query: 453 YYSPAARGLIKRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL- 511
           ++     G ++       +    + R               + +G G  GKV        
Sbjct: 6   HHHHHHHGALEVLFQGPGDPTVFHKRYLKKI----------RDLGEGHFGKVSLYCYDPT 55

Query: 512 -KDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR--LLVYE 567
              T   +AVK L      +    +  E+ I+   +H+++++  G C +       LV E
Sbjct: 56  NDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115

Query: 568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLK 627
            +P G+L ++L       G  Q +  A  +  G+ YLH +     IH D+  +NVL    
Sbjct: 116 YVPLGSLRDYL--PRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVL---- 166

Query: 628 TLDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGV 685
            LD + + KI DFG++K +    +  R   +    + + APE L+        DV+SFGV
Sbjct: 167 -LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGV 225

Query: 686 MLLEII-CGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFE 744
            L E++              E   +        ++                +   LER E
Sbjct: 226 TLYELLTHCDSSQSPPTKFLELIGIAQ----GQMT-------------VLRLTELLERGE 268

Query: 745 RMA------------MVGLWCNHPDPNLRPSMKKVIHMLE 772
           R+             M   W    + + RP+ + +I +L+
Sbjct: 269 RLPRPDKCPAEVYHLMKNCW--ETEASFRPTFENLIPILK 306

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  143 bits (363), Expect = 7e-37
 Identities = 73/344 (21%), Positives = 138/344 (40%), Gaps = 80/344 (23%)

Query: 453 YYSPAARGLIKRRNYFDPNSM----------EINFREFTFQELQEATKGFSKLVGTGSSG 502
           +Y     GL ++ +    +S           EI       +          K +G G  G
Sbjct: 153 HYKKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRESLKLE----------KKLGAGQFG 202

Query: 503 KVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR 562
           +V+           ++AVK + K    + E F+ E  ++    H  LV+L    ++E   
Sbjct: 203 EVWMATYN---KHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE-PI 257

Query: 563 LLVYELMPNGTLSNFLF-HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQN 621
            ++ E M  G+L +FL   EG +    + ++ +  +A G+ ++ +      IH D++  N
Sbjct: 258 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAAN 314

Query: 622 VLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVF 681
           +L     +  + + KI+DFG+++++  ++       +  + + APE +     T K DV+
Sbjct: 315 IL-----VSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 369

Query: 682 SFGVMLLEII-CGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDL 740
           SFG++L+EI+  GR                       +S             +PEV+  L
Sbjct: 370 SFGILLMEIVTYGRIPY------------------PGMS-------------NPEVIRAL 398

Query: 741 ERFERMA------------MVGLWCNHPDPNLRPSMKKVIHMLE 772
           ER  RM             M  + C    P  RP+ + +  +L+
Sbjct: 399 ERGYRMPRPENCPEELYNIM--MRCWKNRPEERPTFEYIQSVLD 440

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  138 bits (350), Expect = 8e-37
 Identities = 72/319 (22%), Positives = 127/319 (39%), Gaps = 82/319 (25%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE 533
           E+   E T            K +G+G  G V  G  +    Q ++AVK + K+   + +E
Sbjct: 4   ELKREEITLL----------KELGSGQFGVVKLGKWK---GQYDVAVKMI-KEGSMSEDE 49

Query: 534 FMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEI 593
           F  E + + +  H  LV+  G CS+E    +V E + NG L N+L   G+     Q +E+
Sbjct: 50  FFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEM 109

Query: 594 ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT 653
              V  G+ +L      Q IH D+  +N L     +D +   K+SDFG+++ +  DQ  +
Sbjct: 110 CYDVCEGMAFLESH---QFIHRDLAARNCL-----VDRDLCVKVSDFGMTRYVLDDQYVS 161

Query: 654 DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII-CGRRHIELSRVEEESEEVDIV 712
               +  + + APE       ++K DV++FG+++ E+   G+                  
Sbjct: 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKM----------------- 204

Query: 713 LSDWVISCMLSRNLQVLVSHDP-------EVLSDLERFERMA------------MVGLWC 753
                                P       EV+  + +  R+             M    C
Sbjct: 205 ---------------------PYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIM--YSC 241

Query: 754 NHPDPNLRPSMKKVIHMLE 772
            H  P  RP+ ++++  +E
Sbjct: 242 WHELPEKRPTFQQLLSSIE 260

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  138 bits (351), Expect = 9e-37
 Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 60/293 (20%)

Query: 497 GTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           G G+ G V +G+ R++  QI++A+K L++   +   EE M E +I+ +  +  +VRL+G 
Sbjct: 19  GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV 78

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
           C  E   +LV E+   G L  FL  + +        E+   V+ G+ YL E+     +H 
Sbjct: 79  CQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHR 134

Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM--GYVAPEWLRNVP 673
           D+  +NVL     L   + AKISDFG+SK L  D +       G     + APE +    
Sbjct: 135 DLAARNVL-----LVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 189

Query: 674 VTTKVDVFSFGVMLLEII-CGRR-HIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVS 731
            +++ DV+S+GV + E +  G++ + ++                                
Sbjct: 190 FSSRSDVWSYGVTMWEALSYGQKPYKKMK------------------------------- 218

Query: 732 HDPEVLSDLERFERMA------------MVGLWCNHPDPNLRPSMKKVIHMLE 772
             PEV++ +E+ +RM             M   W        RP    V   + 
Sbjct: 219 -GPEVMAFIEQGKRMECPPECPPELYALMSDCW--IYKWEDRPDFLTVEQRMR 268

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  138 bits (351), Expect = 2e-36
 Identities = 66/303 (21%), Positives = 122/303 (40%), Gaps = 61/303 (20%)

Query: 492 FSKLVGTGSSGKVYRGILRL--KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKN 548
             K++G+G  G V++G+     +  +I + +K +E     ++ +     +  IG   H +
Sbjct: 17  KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 76

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           +VRLLG C       LV + +P G+L + +       G    +   + +A+G+ YL E  
Sbjct: 77  IVRLLGLCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH- 134

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV---A 665
              ++H ++  +NVL     L +    +++DFG++ LL  D  +           +   A
Sbjct: 135 --GMVHRNLAARNVL-----LKSPSQVQVADFGVADLLPPDDKQLLY--SEAKTPIKWMA 185

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEII-CGRR-HIELSRVEEESEEVDIVLSDWVISCMLS 723
            E +     T + DV+S+GV + E++  G   +  L                        
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR----------------------- 222

Query: 724 RNLQVLVSHDPEVLSDLERFERMA----------MVGLWCNHPDPNLRPSMKKVIHMLEG 773
                      EV   LE+ ER+A          MV + C   D N+RP+ K++ +    
Sbjct: 223 ---------LAEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTR 273

Query: 774 TLE 776
              
Sbjct: 274 MAR 276

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  137 bits (347), Expect = 2e-36
 Identities = 73/326 (22%), Positives = 131/326 (40%), Gaps = 82/326 (25%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE 533
            I+  E TF           + +G+G  G V+ G       + ++A+K + ++   + E+
Sbjct: 4   VIDPSELTFV----------QEIGSGQFGLVHLGYWL---NKDKVAIKTI-REGAMSEED 49

Query: 534 FMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEI 593
           F+ E +++ +  H  LV+L G C E+    LV E M +G LS++L  +         + +
Sbjct: 50  FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGM 109

Query: 594 ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT 653
            L V  G+ YL E     +IH D+  +N L     +  N + K+SDFG+++ +  DQ  +
Sbjct: 110 CLDVCEGMAYLEEA---CVIHRDLAARNCL-----VGENQVIKVSDFGMTRFVLDDQYTS 161

Query: 654 DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII-CGRRHIELSRVEEESEEVDIV 712
            T  +  + + +PE       ++K DV+SFGV++ E+   G+                  
Sbjct: 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI----------------- 204

Query: 713 LSDWVISCMLSRNLQVLVSHDP-------EVLSDLERFERMA------------MVGLWC 753
                                P       EV+ D+    R+             M   W 
Sbjct: 205 ---------------------PYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW- 242

Query: 754 NHPDPNLRPSMKKVIHMLEGTLEVGM 779
               P  RP+  +++  L    E G+
Sbjct: 243 -RERPEDRPAFSRLLRQLAEIAESGL 267

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  141 bits (356), Expect = 4e-36
 Identities = 65/329 (19%), Positives = 115/329 (34%), Gaps = 67/329 (20%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT--NE-EFMTELKIIGRTHHKN 548
              ++G G+ G +     R      ++AVK++  +       E + + E        H N
Sbjct: 28  PKDVLGHGAEGTIVY---RGMFDNRDVAVKRILPECFSFADREVQLLRESD-----EHPN 79

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           ++R      +   + +  EL    TL  ++  +      ++ + +      GL +LH   
Sbjct: 80  VIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL- 137

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ--TRTDTNMRGTMGYVAP 666
              I+H D+KP N+L+ +        A ISDFG+ K L   +      + + GT G++AP
Sbjct: 138 --NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195

Query: 667 EWLR---NVPVTTKVDVFSFGVMLLEIICGRRH-----------IELSRVEEESEEVDIV 712
           E L        T  VD+FS G +   +I    H           I L     +    +  
Sbjct: 196 EMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKH 255

Query: 713 LSDWV---ISCMLSRN-------LQVLVSH-------------------------DPEVL 737
                   I  M++ +         VL  H                         D  ++
Sbjct: 256 EDVIARELIEKMIAMDPQKRPSAKHVL-KHPFFWSLEKQLQFFQDVSDRIEKESLDGPIV 314

Query: 738 SDLERFERMAMVGLWCNHPDPNLRPSMKK 766
             LER  R  +   W  +    L+  ++K
Sbjct: 315 KQLERGGRAVVKMDWRENITVPLQTDLRK 343

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  137 bits (347), Expect = 4e-36
 Identities = 62/227 (27%), Positives = 110/227 (48%), Gaps = 24/227 (10%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTN 531
            ++ +  T ++         K +G+G+ G V +G  ++K     +AVK L+ +       
Sbjct: 12  YLDRKLLTLED---------KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 62

Query: 532 EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV 591
           +E + E  ++ +  +  +VR++G C  E   +LV E+   G L+ +L  + +       +
Sbjct: 63  DELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYL-QQNRHVKDKNII 120

Query: 592 EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT 651
           E+   V+ G+ YL E      +H D+  +NVL     L T + AKISDFG+SK L  D+ 
Sbjct: 121 ELVHQVSMGMKYLEES---NFVHRDLAARNVL-----LVTQHYAKISDFGLSKALRADEN 172

Query: 652 RTDTNMRGTM--GYVAPEWLRNVPVTTKVDVFSFGVMLLEII-CGRR 695
                  G     + APE +     ++K DV+SFGV++ E    G++
Sbjct: 173 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 219

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  136 bits (345), Expect = 6e-36
 Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 12/201 (5%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
               +G G  G+VY G    K   + +AVK L K+     EEF+ E  ++    H NLV+
Sbjct: 17  MKHKLGGGQYGEVYEG--VWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQ 73

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           LLG C+ E    ++ E M  G L ++L     Q    V  + +A  ++  + YL ++   
Sbjct: 74  LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK--- 130

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
             IH D+  +N L     +  N++ K++DFG+S+L+  D        +  + + APE L 
Sbjct: 131 NFIHRDLAARNCL-----VGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA 185

Query: 671 NVPVTTKVDVFSFGVMLLEII 691
               + K DV++FGV+L EI 
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIA 206

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  136 bits (344), Expect = 8e-36
 Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 28/214 (13%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVK--KLEKDIEKTNEEFMTELKIIGRTHHKNL 549
           F   +G GS   VY+G+    +T +E+A    +  K  +   + F  E +++    H N+
Sbjct: 30  FDIEIGRGSFKTVYKGLD--TETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 87

Query: 550 VRLLGFC---SEEDKRLLVY-ELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVARG 600
           VR         +  K +++  ELM +GTL  +L             W +++       +G
Sbjct: 88  VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQI------LKG 141

Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
           L +LH      IIH D+K  N+ +           KI D G++ L      +    + GT
Sbjct: 142 LQFLHT-RTPPIIHRDLKCDNIFITGP----TGSVKIGDLGLATLKRASFAKA---VIGT 193

Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
             ++APE          VDV++FG+ +LE+    
Sbjct: 194 PEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSE 226

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  137 bits (347), Expect = 8e-36
 Identities = 67/297 (22%), Positives = 132/297 (44%), Gaps = 57/297 (19%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEI--AVKKLEKD-IEKTNEEFMTELKIIGRTHHKN 548
             K++G+G+ G VY+G+   +  +++I  A+K+L +    K N+E + E  ++    + +
Sbjct: 19  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 78

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           + RLLG C       L+ +LMP G L +++       G    +   + +A+G+ YL +  
Sbjct: 79  VCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ-TRTDTNMRGTMGYVAPE 667
              ++H D+  +NVL     + T    KI+DFG++KLL  ++        +  + ++A E
Sbjct: 138 ---LVHRDLAARNVL-----VKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189

Query: 668 WLRNVPVTTKVDVFSFGVMLLEII-CGRR-HIELSRVEEESEEVDIVLSDWVISCMLSRN 725
            + +   T + DV+S+GV + E++  G + +  +                          
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP------------------------- 224

Query: 726 LQVLVSHDPEVLSDLERFERMA----------MVGLWCNHPDPNLRPSMKKVIHMLE 772
                    E+ S LE+ ER+           M+ + C   D + RP  +++I    
Sbjct: 225 -------ASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  135 bits (342), Expect = 1e-35
 Identities = 62/223 (27%), Positives = 111/223 (49%), Gaps = 23/223 (10%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE 533
           EI+ ++ TF           K +GTG  G V  G  R    Q ++A+K + K+   + +E
Sbjct: 20  EIDPKDLTFL----------KELGTGQFGVVKYGKWR---GQYDVAIKMI-KEGSMSEDE 65

Query: 534 FMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEI 593
           F+ E K++    H+ LV+L G C+++    ++ E M NG L N+L     R    Q +E+
Sbjct: 66  FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 125

Query: 594 ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT 653
              V   + YL  +   Q +H D+  +N L     ++   + K+SDFG+S+ +  D+  +
Sbjct: 126 CKDVCEAMEYLESK---QFLHRDLAARNCL-----VNDQGVVKVSDFGLSRYVLDDEYTS 177

Query: 654 DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII-CGRR 695
               +  + +  PE L     ++K D+++FGV++ EI   G+ 
Sbjct: 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 220

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  134 bits (340), Expect = 2e-35
 Identities = 67/300 (22%), Positives = 120/300 (40%), Gaps = 65/300 (21%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQ-IEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNL 549
            ++++G G  G+VY G+      + I +AVK  +KD      E+FM+E  I+    H ++
Sbjct: 16  LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V+L+G   EE    ++ EL P G L ++L         +  V  +L + + + YL     
Sbjct: 76  VKLIGIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI-- 132

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV---AP 666
              +H DI  +N+L     + +    K+ DFG+S+ +  +          T   +   +P
Sbjct: 133 -NCVHRDIAVRNIL-----VASPECVKLGDFGLSRYIEDEDY---YKASVTRLPIKWMSP 183

Query: 667 EWLRNVPVTTKVDVFSFGVMLLEII-CGRR-HIELSRVEEESEEVDIVLSDWVISCMLSR 724
           E +     TT  DV+ F V + EI+  G++    L                         
Sbjct: 184 ESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE------------------------ 219

Query: 725 NLQVLVSHDPEVLSDLERFERMA------------MVGLWCNHPDPNLRPSMKKVIHMLE 772
                   + +V+  LE+ +R+             M   W    DP+ RP   +++  L 
Sbjct: 220 --------NKDVIGVLEKGDRLPKPDLCPPVLYTLMTRCW--DYDPSDRPRFTELVCSLS 269

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  141 bits (358), Expect = 3e-35
 Identities = 61/297 (20%), Positives = 116/297 (39%), Gaps = 59/297 (19%)

Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNL 549
             + +G G  G V++GI    +   + +A+K  +    +   E+F+ E   + +  H ++
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V+L+G  +E     ++ EL   G L +FL            +  A  ++  L YL  +  
Sbjct: 454 VKLIGVITEN-PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK-- 510

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
            + +H DI  +NVL     + +N   K+ DFG+S+ +        +  +  + ++APE +
Sbjct: 511 -RFVHRDIAARNVL-----VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 564

Query: 670 RNVPVTTKVDVFSFGVMLLEII-CGRR-HIELSRVEEESEEVDIVLSDWVISCMLSRNLQ 727
                T+  DV+ FGV + EI+  G +    +                            
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK--------------------------- 597

Query: 728 VLVSHDPEVLSDLERFERMA------------MVGLWCNHPDPNLRPSMKKVIHMLE 772
                + +V+  +E  ER+             M    C   DP+ RP   ++   L 
Sbjct: 598 -----NNDVIGRIENGERLPMPPNCPPTLYSLM--TKCWAYDPSRRPRFTELKAQLS 647

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  134 bits (339), Expect = 3e-35
 Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 11/202 (5%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQ-IEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNL 549
             + +G G  G V++GI    +   + +A+K  +    +   E+F+ E   + +  H ++
Sbjct: 19  LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 78

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           V+L+G  +E     ++ EL   G L +FL            +  A  ++  L YL  +  
Sbjct: 79  VKLIGVITEN-PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK-- 135

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
            + +H DI  +NVL     + +N   K+ DFG+S+ +        +  +  + ++APE +
Sbjct: 136 -RFVHRDIAARNVL-----VSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 189

Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
                T+  DV+ FGV + EI+
Sbjct: 190 NFRRFTSASDVWMFGVCMWEIL 211

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  134 bits (340), Expect = 3e-35
 Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 16/216 (7%)

Query: 484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR 543
           E  E       ++G G+ G VY G       Q+ IA+K++ +   + ++    E+ +   
Sbjct: 20  EYDENGDR--VVLGKGTYGIVYAGRD--LSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 75

Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV--EIALGVARGL 601
             HKN+V+ LG  SE     +  E +P G+LS  L  +       ++        +  GL
Sbjct: 76  LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 135

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YLH+    QI+H DIK  NVL++      + + KISDFG SK L      T+T   GT+
Sbjct: 136 KYLHDN---QIVHRDIKGDNVLINTY----SGVLKISDFGTSKRLAGINPCTET-FTGTL 187

Query: 662 GYVAPEWLRNVPV--TTKVDVFSFGVMLLEIICGRR 695
            Y+APE +   P       D++S G  ++E+  G+ 
Sbjct: 188 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP 223

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  138 bits (349), Expect = 5e-35
 Identities = 71/254 (27%), Positives = 113/254 (44%), Gaps = 43/254 (16%)

Query: 453 YYSPAARGLIKR-------------RNYFDPNSMEINFREFTFQELQEATKGFSKLVGTG 499
           +Y+  A GL  R             ++ F  +   +N +E              + +G G
Sbjct: 155 HYTTDADGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELKLL----------QTIGKG 204

Query: 500 SSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE 559
             G V  G  R       +AVK ++ D   T + F+ E  ++ +  H NLV+LLG   EE
Sbjct: 205 EFGDVMLGDYRGNK----VAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258

Query: 560 DKRL-LVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDI 617
              L +V E M  G+L ++L        G    ++ +L V   + YL        +H D+
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDL 315

Query: 618 KPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTK 677
             +NVL     +  + +AK+SDFG    L K+ + T    +  + + APE LR    +TK
Sbjct: 316 AARNVL-----VSEDNVAKVSDFG----LTKEASSTQDTGKLPVKWTAPEALREKKFSTK 366

Query: 678 VDVFSFGVMLLEII 691
            DV+SFG++L EI 
Sbjct: 367 SDVWSFGILLWEIY 380

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  140 bits (354), Expect = 5e-35
 Identities = 77/323 (23%), Positives = 134/323 (41%), Gaps = 64/323 (19%)

Query: 467 YFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD 526
           + DP  ++    +  F +         +L G G+ G V +G+ R++  QI++A+K L++ 
Sbjct: 319 FSDPEELK---DKKLFLKRDNLLIADIEL-GCGNFGSVRQGVYRMRKKQIDVAIKVLKQG 374

Query: 527 -IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP 585
             +   EE M E +I+ +  +  +VRL+G C  E   +LV E+   G L  FL  + +  
Sbjct: 375 TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKFLVGKREEI 433

Query: 586 GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
                 E+   V+ G+ YL E+     +H ++  +NVL     L   + AKISDFG+SK 
Sbjct: 434 PVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVL-----LVNRHYAKISDFGLSKA 485

Query: 646 LNKDQTRTDTNMRGTMGY--VAPEWLRNVPVTTKVDVFSFGVMLLEII-CGRR-HIELSR 701
           L  D +       G       APE +     +++ DV+S+GV + E +  G++ + ++  
Sbjct: 486 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK- 544

Query: 702 VEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMA------------MV 749
                                           PEV++ +E+ +RM             M 
Sbjct: 545 -------------------------------GPEVMAFIEQGKRMECPPECPPELYALM- 572

Query: 750 GLWCNHPDPNLRPSMKKVIHMLE 772
              C       RP    V   + 
Sbjct: 573 -SDCWIYKWEDRPDFLTVEQRMR 594

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  133 bits (338), Expect = 6e-35
 Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 14/206 (6%)

Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNL 549
           F++++G G  G VY G L   D  +I  AVK L +        +F+TE  I+    H N+
Sbjct: 29  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88

Query: 550 VRLLGFCSEEDK-RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           + LLG C   +   L+V   M +G L NF+ +E   P     +   L VA+G+ YL    
Sbjct: 89  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA--- 145

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV---A 665
             + +H D+  +N +     LD  +  K++DFG+++ +   +  +  N  G    V   A
Sbjct: 146 SKKFVHRDLAARNCM-----LDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEII 691
            E L+    TTK DV+SFGV+L E++
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELM 226

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  135 bits (341), Expect = 6e-35
 Identities = 59/206 (28%), Positives = 83/206 (40%), Gaps = 19/206 (9%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
             VG GS G+V+R     K T  + AVKK+   +E    E   EL          +V L 
Sbjct: 64  PRVGRGSFGEVHRMKD--KQTGFQCAVKKV--RLEVFRVE---ELVACAGLSSPRIVPLY 116

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
           G   E     +  EL+  G+L   +   G  P              GL YLH     +I+
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALY-YLGQALEGLEYLHTR---RIL 172

Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN----MRGTMGYVAPEWL 669
           H D+K  NVLL          A + DFG +  L  D           + GT  ++APE +
Sbjct: 173 HGDVKADNVLLSSDGSR----AALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 228

Query: 670 RNVPVTTKVDVFSFGVMLLEIICGRR 695
              P   KVD++S   M+L ++ G  
Sbjct: 229 MGKPCDAKVDIWSSCCMMLHMLNGCH 254

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  140 bits (354), Expect = 7e-35
 Identities = 70/293 (23%), Positives = 119/293 (40%), Gaps = 36/293 (12%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE-FMTELKIIGRTHHKNLV 550
             + +GTG  G V R     +DT  ++A+K+  +++   N E +  E++I+ + +H N+V
Sbjct: 18  MKERLGTGGFGYVLRW--IHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75

Query: 551 RLL------GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGL 601
                       +  D  LL  E    G L  +L ++ +    ++   I      ++  L
Sbjct: 76  SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL-NQFENCCGLKEGPIRTLLSDISSAL 134

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YLHE    +IIH D+KP+N++L        +  KI D G +K L            GT+
Sbjct: 135 RYLHEN---RIIHRDLKPENIVLQPGPQRLIH--KIIDLGYAKEL-DQGELCTE-FVGTL 187

Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR-------HIELSRVEEESEEVDIVLS 714
            Y+APE L     T  VD +SFG +  E I G R        ++      E     IV+ 
Sbjct: 188 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVY 247

Query: 715 DWVISCMLSRNLQVLVSHDPEVLSDLER--FERMAMVGLWCNHPDPNLRPSMK 765
           D +   +   ++    +H   +L+       + M M            R +  
Sbjct: 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMW-------HQRQRGTDP 293

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  133 bits (337), Expect = 9e-35
 Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 15/206 (7%)

Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHK 547
             + +G GS G V RG         + +AVK L+ D+    +  ++F+ E+  +    H+
Sbjct: 22  LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           NL+RL G         +V EL P G+L + L               A+ VA G+ YL  +
Sbjct: 82  NLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 140

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY--VA 665
              + IH D+  +N+L     L T  + KI DFG+ + L ++           + +   A
Sbjct: 141 ---RFIHRDLAARNLL-----LATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 192

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEII 691
           PE L+    +   D + FGV L E+ 
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMF 218

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  135 bits (342), Expect = 9e-35
 Identities = 67/245 (27%), Positives = 112/245 (45%), Gaps = 16/245 (6%)

Query: 453 YYSPAARGLIKRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLK 512
            Y   A  +    +  +P  ++   +             F++++G G  G VY G L   
Sbjct: 56  LYFQGANTVHIDLSALNPELVQ-AVQHVV-IGPSSLIVHFNEVIGRGHFGCVYHGTLLDN 113

Query: 513 D-TQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDK-RLLVYELM 569
           D  +I  AVK L +        +F+TE  I+    H N++ LLG C   +   L+V   M
Sbjct: 114 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173

Query: 570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL 629
            +G L NF+ +E   P     +   L VA+G+ +L      + +H D+  +N +     L
Sbjct: 174 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCM-----L 225

Query: 630 DTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV---APEWLRNVPVTTKVDVFSFGVM 686
           D  +  K++DFG+++ +   +  +  N  G    V   A E L+    TTK DV+SFGV+
Sbjct: 226 DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 285

Query: 687 LLEII 691
           L E++
Sbjct: 286 LWELM 290

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  132 bits (335), Expect = 2e-34
 Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 14/206 (6%)

Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNL 549
             +++G G  G VY G    +   +I+ A+K L +    +  E F+ E  ++   +H N+
Sbjct: 25  SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84

Query: 550 VRLLGFCSEED-KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           + L+G     +    ++   M +G L  F+    + P     +   L VARG+ YL    
Sbjct: 85  LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA--- 141

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV---A 665
           E + +H D+  +N +     LD ++  K++DFG+++ +   +  +    R     V   A
Sbjct: 142 EQKFVHRDLAARNCM-----LDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTA 196

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEII 691
            E L+    TTK DV+SFGV+L E++
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELL 222

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  131 bits (333), Expect = 2e-34
 Identities = 71/296 (23%), Positives = 127/296 (42%), Gaps = 62/296 (20%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
             + +G G  G+V+ G         ++AVK L K    + + F+ E  ++ +  H+ LVR
Sbjct: 17  LVERLGAGQFGEVWMGYYN---GHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVR 72

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           L    ++E    ++ E M NG+L +FL    G +    + +++A  +A G+ ++ E    
Sbjct: 73  LYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 128

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
             IH D++  N+L     +      KI+DFG+++L+  ++       +  + + APE + 
Sbjct: 129 NYIHRDLRAANIL-----VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 183

Query: 671 NVPVTTKVDVFSFGVMLLEII-CGRR-HIELSRVEEESEEVDIVLSDWVISCMLSRNLQV 728
               T K DV+SFG++L EI+  GR  +  ++                            
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT---------------------------- 215

Query: 729 LVSHDPEVLSDLERFERMA------------MVGLWCNHPDPNLRPSMKKVIHMLE 772
               +PEV+ +LER  RM             M    C    P  RP+   +  +LE
Sbjct: 216 ----NPEVIQNLERGYRMVRPDNCPEELYQLM--RLCWKERPEDRPTFDYLRSVLE 265

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  132 bits (335), Expect = 3e-34
 Identities = 76/299 (25%), Positives = 123/299 (41%), Gaps = 50/299 (16%)

Query: 492 FSKLVGTGSSGKVYRGILR---LKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHK 547
             + +G G+ G+VY G +       + +++AVK L E   E+   +F+ E  II + +H+
Sbjct: 34  LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 93

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFL------FHEGQRPGWVQRVEIALGVARGL 601
           N+VR +G   +   R ++ ELM  G L +FL        +      +  + +A  +A G 
Sbjct: 94  NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL E      IH DI  +N LL         +AKI DFG++    +D  R     +G  
Sbjct: 154 QYLEEN---HFIHRDIAARNCLLTCP--GPGRVAKIGDFGMA----RDIYRASYYRKGGC 204

Query: 662 GYV-----APEWLRNVPVTTKVDVFSFGVMLLEII-CGRR-HIELSRVEEESEEV-DIVL 713
             +      PE       T+K D +SFGV+L EI   G   +   S     ++EV + V 
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLEFVT 259

Query: 714 SDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
           S   +               P+       +  M      C    P  RP+   ++  +E
Sbjct: 260 SGGRMDP-------------PKNCPG-PVYRIM----TQCWQHQPEDRPNFAIILERIE 300

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  135 bits (341), Expect = 3e-34
 Identities = 74/307 (24%), Positives = 119/307 (38%), Gaps = 63/307 (20%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLV 550
             K++G GSSG V     +       +AVK++  D     +  + E+K++  +  H N++
Sbjct: 19  SEKILGYGSSGTVV---FQGSFQGRPVAVKRMLIDFC---DIALMEIKLLTESDDHPNVI 72

Query: 551 RLLGFCSEEDKRL--LVYELMPNGTLSNFLFHEGQRPGWVQRV------EIALGVARGLL 602
           R   +CSE   R   +  EL  N  L + +  +      ++         +   +A G+ 
Sbjct: 73  RY--YCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129

Query: 603 YLHEECETQIIHCDIKPQNVLLDLK--------TLDTNYMAKISDFGISKLLNKDQTRTD 654
           +LH     +IIH D+KPQN+L+           T   N    ISDFG+ K L+  Q+   
Sbjct: 130 HLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR 186

Query: 655 TNMR---GTMGYVAPEWLRNV-------PVTTKVDVFSFGVMLLEIICGRRHIELSRVEE 704
           TN+    GT G+ APE L           +T  +D+FS G +   I+   +H    +   
Sbjct: 187 TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246

Query: 705 ESE----EVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNL 760
           ES        +     +    L      L+S                         DP  
Sbjct: 247 ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQ--------------------MIDHDPLK 286

Query: 761 RPSMKKV 767
           RP+  KV
Sbjct: 287 RPTAMKV 293

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  133 bits (336), Expect = 4e-34
 Identities = 51/299 (17%), Positives = 101/299 (33%), Gaps = 42/299 (14%)

Query: 492 FSKLVGTGSSGKVYRGILR---LKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKN 548
              L+G G+  +VY            + +  +K  +             ++ +  +    
Sbjct: 69  VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHM 128

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWV----QRVEIALGVARGLLYL 604
            ++       ++  +LV EL   GTL N +      P  V      +  A+ +   +  +
Sbjct: 129 FMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQV 188

Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMA------KISDFGISKLLNK-DQTRTDTNM 657
           H+    +IIH DIKP N +L    L+ +          + D G S  +    +    T  
Sbjct: 189 HDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAK 245

Query: 658 RGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV 717
             T G+   E L N P   ++D F     +  ++ G  ++++     E            
Sbjct: 246 CETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFG-TYMKVKNEGGE----------CK 294

Query: 718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE 776
              +  R          ++ ++   F  M       N PD +  PS+  +   L+   +
Sbjct: 295 PEGLFRR------LPHLDMWNEF--FHVML------NIPDCHHLPSLDLLRQKLKKVFQ 339

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  130 bits (329), Expect = 7e-34
 Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 17/204 (8%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTN--EEFMTELKIIGRTHHKNLV 550
           + +G G  G VY    R K ++  +A+K L K  +EK     +   E++I     H N++
Sbjct: 15  RPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 72

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RL G+  +  +  L+ E  P GT+   L    +         I   +A  L Y H +   
Sbjct: 73  RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSK--- 128

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
           ++IH DIKP+N+LL      +    KI+DFG S       +R    + GT+ Y+ PE + 
Sbjct: 129 RVIHRDIKPENLLLG-----SAGELKIADFGWSVHA--PSSRRTD-LCGTLDYLPPEMIE 180

Query: 671 NVPVTTKVDVFSFGVMLLEIICGR 694
                 KVD++S GV+  E + G+
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGK 204

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  130 bits (328), Expect = 1e-33
 Identities = 60/297 (20%), Positives = 120/297 (40%), Gaps = 63/297 (21%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +L+G+G  G+V++   + +       +K+    ++  NE+   E+K + +  H N+V   
Sbjct: 17  ELIGSGGFGQVFKA--KHRIDGKTYVIKR----VKYNNEKAEREVKALAKLDHVNIVHYN 70

Query: 554 GFCSEEDKRL----------------LVYELMPNGTLSNFLFHEGQRPGWVQRVEIA--- 594
           G     D                   +  E    GTL  ++  E +R   + +V      
Sbjct: 71  GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALELF 128

Query: 595 LGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD 654
             + +G+ Y+H +   ++I+ D+KP N+ L           KI DFG+   L  D  RT 
Sbjct: 129 EQITKGVDYIHSK---KLINRDLKPSNIFLV-----DTKQVKIGDFGLVTSLKNDGKRTR 180

Query: 655 TNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS 714
           +  +GT+ Y++PE + +     +VD+++ G++L E++             E+ +    L 
Sbjct: 181 S--KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDT------AFETSKFFTDLR 232

Query: 715 DWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML 771
           D +IS +  +  + L+                           P  RP+  +++  L
Sbjct: 233 DGIISDIFDKKEKTLLQ--------------------KLLSKKPEDRPNTSEILRTL 269

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  132 bits (333), Expect = 1e-33
 Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 24/215 (11%)

Query: 492 FSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHK 547
             + +G G+ G+VY G +       + +++AVK L E   E+   +F+ E  II + +H+
Sbjct: 75  LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 134

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFL------FHEGQRPGWVQRVEIALGVARGL 601
           N+VR +G   +   R ++ ELM  G L +FL        +      +  + +A  +A G 
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YL E      IH DI  +N LL         +AKI DFG++    +D  R     +G  
Sbjct: 195 QYLEEN---HFIHRDIAARNCLLTCP--GPGRVAKIGDFGMA----RDIYRAGYYRKGGC 245

Query: 662 GYV-----APEWLRNVPVTTKVDVFSFGVMLLEII 691
             +      PE       T+K D +SFGV+L EI 
Sbjct: 246 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 280

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  130 bits (329), Expect = 2e-33
 Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 23/217 (10%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLV 550
            S ++G G++  V+RG  R K T    A+K        +  +  M E +++ + +HKN+V
Sbjct: 13  LSDILGQGATANVFRG--RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70

Query: 551 RLLGFCSEEDKRL--LVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLH 605
           +L     E   R   L+ E  P G+L   L  E      +   E  +    V  G+ +L 
Sbjct: 71  KLFAIEEETTTRHKVLIMEFCPCGSLYTVL-EEPSNAYGLPESEFLIVLRDVVGGMNHLR 129

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
           E     I+H +IKP N++  +   D   + K++DFG ++ L  D+      + GT  Y+ 
Sbjct: 130 EN---GIVHRNIKPGNIMRVIGE-DGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLH 183

Query: 666 PEWLRNVPVTT--------KVDVFSFGVMLLEIICGR 694
           P+      +           VD++S GV       G 
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  128 bits (324), Expect = 3e-33
 Identities = 63/202 (31%), Positives = 99/202 (49%), Gaps = 20/202 (9%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
             + +G G  G V  G  R      ++AVK ++ D   T + F+ E  ++ +  H NLV+
Sbjct: 25  LLQTIGKGEFGDVMLGDYR----GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQ 78

Query: 552 LLGFCSEEDKRL-LVYELMPNGTLSNFL-FHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           LLG   EE   L +V E M  G+L ++L        G    ++ +L V   + YL     
Sbjct: 79  LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-- 136

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
              +H D+  +NVL     +  + +AK+SDFG    L K+ + T    +  + + APE L
Sbjct: 137 -NFVHRDLAARNVL-----VSEDNVAKVSDFG----LTKEASSTQDTGKLPVKWTAPEAL 186

Query: 670 RNVPVTTKVDVFSFGVMLLEII 691
           R    +TK DV+SFG++L EI 
Sbjct: 187 REKKFSTKSDVWSFGILLWEIY 208

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  128 bits (325), Expect = 5e-33
 Identities = 68/303 (22%), Positives = 105/303 (34%), Gaps = 49/303 (16%)

Query: 468 FDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI 527
           +DP+  E  F++ +FQ L          +G GS G+V++   R K+     AVK+     
Sbjct: 46  YDPSRPESFFQQ-SFQRL--------SRLGHGSYGEVFKV--RSKEDGRLYAVKRSMSPF 94

Query: 528 EKTNE--EFMTELKIIGR-THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR 584
               +    + E+    +   H   VRL     E     L  EL    +L       G  
Sbjct: 95  RGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGAS 153

Query: 585 PGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK 644
               Q           L +LH +    ++H D+KP N+      L      K+ DFG+  
Sbjct: 154 LPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIF-----LGPRGRCKLGDFGLLV 205

Query: 645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEE 704
            L            G   Y+APE L+     T  DVFS G+ +LE+ C          E 
Sbjct: 206 ELGTAGAGEV--QEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMEL--PHGGEG 260

Query: 705 ESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSM 764
             +     L     +  LS  L+ ++                         PDP LR + 
Sbjct: 261 WQQLRQGYLPP-EFTAGLSSELRSVLV--------------------MMLEPDPKLRATA 299

Query: 765 KKV 767
           + +
Sbjct: 300 EAL 302

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  127 bits (321), Expect = 8e-33
 Identities = 59/204 (28%), Positives = 91/204 (44%), Gaps = 17/204 (8%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTN--EEFMTELKIIGRTHHKNLV 550
           + +G G  G VY    R K  +  +A+K L K  +EK     +   E++I     H N++
Sbjct: 20  RPLGKGKFGNVYLA--REKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNIL 77

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           R+  +  +  +  L+ E  P G L   L   G+         +   +A  L Y HE    
Sbjct: 78  RMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE-LADALHYCHER--- 133

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
           ++IH DIKP+N+L+           KI+DFG S        R  T M GT+ Y+ PE + 
Sbjct: 134 KVIHRDIKPENLLMGY-----KGELKIADFGWSVH--APSLRRRT-MCGTLDYLPPEMIE 185

Query: 671 NVPVTTKVDVFSFGVMLLEIICGR 694
                 KVD++  GV+  E + G 
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGM 209

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  129 bits (325), Expect = 9e-33
 Identities = 65/318 (20%), Positives = 119/318 (37%), Gaps = 65/318 (20%)

Query: 470 PNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-- 527
            + +++      FQ +++  +   + +G GS GK      +  +   +  +K++      
Sbjct: 8   SSGVDLGTENLYFQSMEKYVRL--QKIGEGSFGKAILV--KSTEDGRQYVIKEINISRMS 63

Query: 528 EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-------FH 580
            K  EE   E+ ++    H N+V+      E     +V +    G L   +       F 
Sbjct: 64  SKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQ 123

Query: 581 EGQRPGW-VQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD 639
           E Q   W VQ       +   L ++H+    +I+H DIK QN+ L       +   ++ D
Sbjct: 124 EDQILDWFVQ-------ICLALKHVHDR---KILHRDIKSQNIFLT-----KDGTVQLGD 168

Query: 640 FGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR---- 695
           FGI+++LN           GT  Y++PE   N P   K D+++ G +L E+   +     
Sbjct: 169 FGIARVLNSTVELARA-CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227

Query: 696 --HIELSRVEEESEEVDIVLSDW-VISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLW 752
                L           I+   +  +S   S +L+ LVS                     
Sbjct: 228 GSMKNLVL--------KIISGSFPPVSLHYSYDLRSLVS--------------------Q 259

Query: 753 CNHPDPNLRPSMKKVIHM 770
               +P  RPS+  ++  
Sbjct: 260 LFKRNPRDRPSVNSILEK 277

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  128 bits (323), Expect = 1e-32
 Identities = 77/310 (24%), Positives = 140/310 (45%), Gaps = 56/310 (18%)

Query: 492 FSKLVGTGSSGKVYRGILR---LKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHK 547
            S+ +G GS G VY G+ +     + +  +A+K + +    +   EF+ E  ++   +  
Sbjct: 29  MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFL---------FHEGQRPGWVQRVEIALGVA 598
           ++VRLLG  S+    L++ ELM  G L ++L               P   + +++A  +A
Sbjct: 89  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148

Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR 658
            G+ YL+     + +H D+  +N +     +  ++  KI DFG+++ +      TD   +
Sbjct: 149 DGMAYLNAN---KFVHRDLAARNCM-----VAEDFTVKIGDFGMTRDIY----ETDYYRK 196

Query: 659 GTMGYV-----APEWLRNVPVTTKVDVFSFGVMLLEII--CGRRHIELSRVEEESEEV-D 710
           G  G +     +PE L++   TT  DV+SFGV+L EI     + +  LS     +E+V  
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS-----NEQVLR 251

Query: 711 IVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM 770
            V+   ++               P+   D   FE M M    C   +P +RPS  ++I  
Sbjct: 252 FVMEGGLLDK-------------PDNCPD-MLFELMRM----CWQYNPKMRPSFLEIISS 293

Query: 771 LEGTLEVGMP 780
           ++  +E G  
Sbjct: 294 IKEEMEPGFR 303

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  127 bits (321), Expect = 2e-32
 Identities = 47/217 (21%), Positives = 97/217 (44%), Gaps = 30/217 (13%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNL-- 549
           K +G+G S KV++    L + +   A+K +  +    +T + +  E+  + +    +   
Sbjct: 34  KQIGSGGSSKVFQV---LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 90

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           +RL  +   +    +V E   N  L+++L  +     W ++      +   +  +H+   
Sbjct: 91  IRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKS-YWKNMLEAVHTIHQH-- 146

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT-DTNMRGTMGYVAPEW 668
             I+H D+KP N L+       + M K+ DFGI+  +  D T     +  GT+ Y+ PE 
Sbjct: 147 -GIVHSDLKPANFLIV------DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 199

Query: 669 LRNVP-----------VTTKVDVFSFGVMLLEIICGR 694
           ++++            ++ K DV+S G +L  +  G+
Sbjct: 200 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  127 bits (321), Expect = 2e-32
 Identities = 59/286 (20%), Positives = 116/286 (40%), Gaps = 41/286 (14%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQI----EIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNL 549
           K +G G   +VYR    L D       ++ +  L     +   + + E+ ++ + +H N+
Sbjct: 38  KKIGRGQFSEVYRA-ACLLDGVPVALKKVQIFDLMDAKAR--ADCIKEIDLLKQLNHPNV 94

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIA---LGVARGLLYLHE 606
           ++      E+++  +V EL   G LS  + H  ++   +    +    + +   L ++H 
Sbjct: 95  IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS 154

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
               +++H DIKP NV +         + K+ D G+ +  +   T   + + GT  Y++P
Sbjct: 155 R---RVMHRDIKPANVFIT-----ATGVVKLGDLGLGRFFSSKTTAAHS-LVGTPYYMSP 205

Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDW--VISCMLSR 724
           E +       K D++S G +L E+   +      ++   S    I   D+  + S   S 
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSE 265

Query: 725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM 770
            L+ LV+                     C +PDP  RP +  V  +
Sbjct: 266 ELRQLVN--------------------MCINPDPEKRPDVTYVYDV 291

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  127 bits (322), Expect = 2e-32
 Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 35/223 (15%)

Query: 492 FSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGR-THH 546
           F K +G G+ GKV       L  +D  +++AVK L         E  M+ELKI+     H
Sbjct: 50  FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109

Query: 547 KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-------------FHEGQRPGWVQRVEI 593
           +N+V LLG C+     L++ E    G L NFL                         +  
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169

Query: 594 ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT 653
           +  VA+G+ +L  +     IH D+  +NVL     L   ++AKI DFG+++ +  D    
Sbjct: 170 SSQVAQGMAFLASK---NCIHRDVAARNVL-----LTNGHVAKIGDFGLARDIMND---- 217

Query: 654 DTNMRGTMGYV-----APEWLRNVPVTTKVDVFSFGVMLLEII 691
              +      +     APE + +   T + DV+S+G++L EI 
Sbjct: 218 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 260

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  126 bits (318), Expect = 2e-32
 Identities = 58/317 (18%), Positives = 106/317 (33%), Gaps = 68/317 (21%)

Query: 470 PNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKK--LEKDI 527
              M+  +    F EL        + +G+G  G V++     +      A+K+       
Sbjct: 2   AMGMKSRYTT-EFHEL--------EKIGSGEFGSVFKC--VKRLDGCIYAIKRSKKPLAG 50

Query: 528 EKTNEEFMTELKIIGR-THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPG 586
               +  + E+        H ++VR     +E+D  L+  E    G+L++ +    +   
Sbjct: 51  SVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMS 110

Query: 587 WVQRVEIA---LGVARGLLYLHEECETQIIHCDIKPQNVLLD--------------LKTL 629
           + +  E+    L V RGL Y+H      ++H DIKP N+ +                   
Sbjct: 111 YFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA 167

Query: 630 DTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE-WLRNVPVTTKVDVFSFGVMLL 688
               M KI D G    ++  Q        G   ++A E    N     K D+F+  + ++
Sbjct: 168 SNKVMFKIGDLGHVTRISSPQV-----EEGDSRFLANEVLQENYTHLPKADIFALALTVV 222

Query: 689 EIICGRRHIELSRVEEESEEVDIVLSDWV--ISCMLSRNLQVLVSHDPEVLSDLERFERM 746
                        +    ++   +    +  I  +LS+    L+                
Sbjct: 223 CAAGAE------PLPRNGDQWHEIRQGRLPRIPQVLSQEFTELLK--------------- 261

Query: 747 AMVGLWCNHPDPNLRPS 763
                   HPDP  RPS
Sbjct: 262 -----VMIHPDPERRPS 273

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  126 bits (318), Expect = 4e-32
 Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 36/221 (16%)

Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKN 548
             K++G G  G V  G L+ +D T +++AVK ++ D   ++  EEF++E   +    H N
Sbjct: 38  LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97

Query: 549 LVRLLGFCSEED-----KRLLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGVA 598
           ++RLLG C E       K +++   M  G L  +L         +       ++  + +A
Sbjct: 98  VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157

Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL-NKDQTRTDTN- 656
            G+ YL        +H D+  +N +     L  +    ++DFG+SK + + D  R     
Sbjct: 158 LGMEYL---SNRNFLHRDLAARNCM-----LRDDMTVCVADFGLSKKIYSGDYYRQGRIA 209

Query: 657 ------MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII 691
                 +       A E L +   T+K DV++FGV + EI 
Sbjct: 210 KMPVKWI-------AIESLADRVYTSKSDVWAFGVTMWEIA 243

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  126 bits (318), Expect = 6e-32
 Identities = 74/350 (21%), Positives = 129/350 (36%), Gaps = 94/350 (26%)

Query: 467 YFDPNSMEINF-REFTFQELQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEIAVKK 522
             +P             +++          +G G+ GKV+         +  ++ +AVK 
Sbjct: 24  IENPQYFSDACVHHIKRRDIV-----LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKA 78

Query: 523 LEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL---- 578
           L++  E   ++F  E +++    H+++VR  G C+E    L+V+E M +G L+ FL    
Sbjct: 79  LKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHG 138

Query: 579 ----------FHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKT 628
                            G  Q + +A  VA G++YL        +H D+  +N L     
Sbjct: 139 PDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCL----- 190

Query: 629 LDTNYMAKISDFGISKLL-NKDQTRTDTN-------MRGTMGYVAPEWLRNVPVTTKVDV 680
           +    + KI DFG+S+ + + D  R           M        PE +     TT+ DV
Sbjct: 191 VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM-------PPESILYRKFTTESDV 243

Query: 681 FSFGVMLLEII-CGRR-HIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLS 738
           +SFGV+L EI   G++   +LS                                + E + 
Sbjct: 244 WSFGVVLWEIFTYGKQPWYQLS--------------------------------NTEAID 271

Query: 739 DLERFERMA------------MVGLWCNHPDPNLRPSMKKVIHMLEGTLE 776
            + +   +             M G W    +P  R S+K V   L+   +
Sbjct: 272 CITQGRELERPRACPPEVYAIMRGCW--QREPQQRHSIKDVHARLQALAQ 319

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  127 bits (321), Expect = 6e-32
 Identities = 53/261 (20%), Positives = 112/261 (42%), Gaps = 43/261 (16%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNL-- 549
           K +G+G S KV++    L + +   A+K +  +    +T + +  E+  + +    +   
Sbjct: 62  KQIGSGGSSKVFQV---LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 118

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           +RL  +   +    +V E   N  L+++L  +     W ++      +   +  +H+   
Sbjct: 119 IRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKS-YWKNMLEAVHTIHQH-- 174

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT-DTNMRGTMGYVAPEW 668
             I+H D+KP N L+       + M K+ DFGI+  +  D T     +  G + Y+ PE 
Sbjct: 175 -GIVHSDLKPANFLIV------DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEA 227

Query: 669 LRNVP-----------VTTKVDVFSFGVMLLEIICGR---RHIE-----LSRVEEESEEV 709
           ++++            ++ K DV+S G +L  +  G+   + I      L  + + + E+
Sbjct: 228 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI 287

Query: 710 DI--VLSDW---VISCMLSRN 725
           +   +       V+ C L R+
Sbjct: 288 EFPDIPEKDLQDVLKCCLKRD 308

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  126 bits (318), Expect = 6e-32
 Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 44/252 (17%)

Query: 462 IKRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVK 521
                  +P+     +    + +++     F  ++G G+ G+V +  ++    +++ A+K
Sbjct: 6   HHHHGKNNPDPTI--YPVLDWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIK 58

Query: 522 KLEKDI-EKTNEEFMTELKIIGR-THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL- 578
           ++++   +  + +F  EL+++ +  HH N++ LLG C       L  E  P+G L +FL 
Sbjct: 59  RMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR 118

Query: 579 --------------FHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLL 624
                                   Q +  A  VARG+ YL ++   Q IH D+  +N+L 
Sbjct: 119 KSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNIL- 174

Query: 625 DLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV-----APEWLRNVPVTTKVD 679
               +  NY+AKI+DFG+S+         +  ++ TMG +     A E L     TT  D
Sbjct: 175 ----VGENYVAKIADFGLSR-------GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSD 223

Query: 680 VFSFGVMLLEII 691
           V+S+GV+L EI+
Sbjct: 224 VWSYGVLLWEIV 235

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  127 bits (321), Expect = 7e-32
 Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 21/216 (9%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLV 550
            S ++G G++  V+RG  R K T    A+K        +  +  M E +++ + +HKN+V
Sbjct: 13  LSDILGQGATANVFRG--RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70

Query: 551 RLLGFCSEEDKRL--LVYELMPNGTLSNFLFHEGQRPGWVQRV--EIALGVARGLLYLHE 606
           +L     E   R   L+ E  P G+L   L       G  +     +   V  G+ +L E
Sbjct: 71  KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
                I+H +IKP N++  +   D   + K++DFG ++ L  D+      + GT  Y+ P
Sbjct: 131 N---GIVHRNIKPGNIMRVIGE-DGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHP 184

Query: 667 EWLRNVPVTT--------KVDVFSFGVMLLEIICGR 694
           +      +           VD++S GV       G 
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  125 bits (317), Expect = 8e-32
 Identities = 48/217 (22%), Positives = 98/217 (45%), Gaps = 30/217 (13%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIG--RTHHKNL 549
           K +G+G S KV++    L + +   A+K +  +    +T + +  E+  +   + H   +
Sbjct: 15  KQIGSGGSSKVFQV---LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 71

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           +RL  +   +    +V E   N  L+++L  +     W ++      +   +  +H+   
Sbjct: 72  IRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKS-YWKNMLEAVHTIHQH-- 127

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT-DTNMRGTMGYVAPEW 668
             I+H D+KP N L+       + M K+ DFGI+  +  D T     +  GT+ Y+ PE 
Sbjct: 128 -GIVHSDLKPANFLIV------DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEA 180

Query: 669 LRNVP-----------VTTKVDVFSFGVMLLEIICGR 694
           ++++            ++ K DV+S G +L  +  G+
Sbjct: 181 IKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  125 bits (316), Expect = 9e-32
 Identities = 51/219 (23%), Positives = 91/219 (41%), Gaps = 31/219 (14%)

Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKN 548
             +++G G  G V    L+ +D + +++AVK L+ DI      EEF+ E   +    H +
Sbjct: 27  LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPH 86

Query: 549 LVRLLGFCSEEDKR------LLVYELMPNGTLSNFL-----FHEGQRPGWVQRVEIALGV 597
           + +L+G       +      +++   M +G L  FL                 V   + +
Sbjct: 87  VAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDI 146

Query: 598 ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM 657
           A G+ YL        IH D+  +N +     L  +    ++DFG+S+ +       D   
Sbjct: 147 ACGMEYLS---SRNFIHRDLAARNCM-----LAEDMTVCVADFGLSRKIY----SGDYYR 194

Query: 658 RGTMGYV-----APEWLRNVPVTTKVDVFSFGVMLLEII 691
           +G    +     A E L +   T   DV++FGV + EI+
Sbjct: 195 QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIM 233

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  124 bits (314), Expect = 9e-32
 Identities = 70/321 (21%), Positives = 127/321 (39%), Gaps = 89/321 (27%)

Query: 492 FSKLVGTGSSGKVYRGILR---LKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKN 548
             + +G G+ GKV+            ++ +AVK L+       ++F  E +++    H++
Sbjct: 19  LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFL---------------FHEGQRPGWVQRVEI 593
           +V+  G C + D  ++V+E M +G L+ FL                      G  Q + I
Sbjct: 79  IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138

Query: 594 ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL-NKDQTR 652
           A  +A G++YL  +     +H D+  +N L     +  N + KI DFG+S+ + + D  R
Sbjct: 139 ASQIASGMVYLASQ---HFVHRDLATRNCL-----VGANLLVKIGDFGMSRDVYSTDYYR 190

Query: 653 TDTN-------MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII-CGRR-HIELSRVE 703
              +       M        PE +     TT+ DV+SFGV+L EI   G++   +LS   
Sbjct: 191 VGGHTMLPIRWM-------PPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS--- 240

Query: 704 EESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMA------------MVGL 751
                                        + EV+  + +   +             M+G 
Sbjct: 241 -----------------------------NTEVIECITQGRVLERPRVCPKEVYDVMLGC 271

Query: 752 WCNHPDPNLRPSMKKVIHMLE 772
           W    +P  R ++K++  +L 
Sbjct: 272 W--QREPQQRLNIKEIYKILH 290

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  124 bits (313), Expect = 1e-31
 Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 17/211 (8%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVR 551
             +GTGS G+  +   R K     +  K+L+     E   +  ++E+ ++    H N+VR
Sbjct: 12  YTIGTGSYGRCQKI--RRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR 69

Query: 552 LLG-FCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWV---QRVEIALGVARGLLYLHE 606
                    +  L +V E    G L++ +    +   ++     + +   +   L   H 
Sbjct: 70  YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129

Query: 607 ECET--QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
             +    ++H D+KP NV LD          K+ DFG++++LN D +   T + GT  Y+
Sbjct: 130 RSDGGHTVLHRDLKPANVFLD-----GKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYM 183

Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           +PE +  +    K D++S G +L E+     
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMP 214

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  123 bits (310), Expect = 5e-31
 Identities = 73/333 (21%), Positives = 119/333 (35%), Gaps = 100/333 (30%)

Query: 492 FSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKI---IGRT 544
           F K +G G+ GKV       L   D  + +AVK L+        E  M+ELK+   +G  
Sbjct: 27  FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 85

Query: 545 HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-------FHEGQRPGWVQR------- 590
            H N+V LLG C+     L++ E    G L NFL             P  ++        
Sbjct: 86  -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144

Query: 591 ---VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
              +  +  VA+G+ +L        IH D+  +N+L     L    + KI DFG+++ + 
Sbjct: 145 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNIL-----LTHGRITKICDFGLARDIK 196

Query: 648 KDQTRTDTNMRGTMGYV-----APEWLRNVPVTTKVDVFSFGVMLLEII-------CGRR 695
            D       +      +     APE + N   T + DV+S+G+ L E+         G  
Sbjct: 197 ND----SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG-- 250

Query: 696 HIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMA-------- 747
                                             +  D +    ++   RM         
Sbjct: 251 ----------------------------------MPVDSKFYKMIKEGFRMLSPEHAPAE 276

Query: 748 ----MVGLWCNHPDPNLRPSMKKVIHMLEGTLE 776
               M   W    DP  RP+ K+++ ++E  + 
Sbjct: 277 MYDIMKTCW--DADPLKRPTFKQIVQLIEKQIS 307

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  122 bits (308), Expect = 5e-31
 Identities = 63/319 (19%), Positives = 111/319 (34%), Gaps = 84/319 (26%)

Query: 492 FSKLVGTGSSGKVYRGILR---LKDTQIEIAVKKL-EKDIEKTNEEFMTELKIIGRTHHK 547
           F + +G    GKVY+G L      +    +A+K L +K      EEF  E  +  R  H 
Sbjct: 13  FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 72

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFL---------------FHEGQRPGWVQRVE 592
           N+V LLG  +++    +++    +G L  FL                           V 
Sbjct: 73  NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132

Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL-NKDQT 651
           +   +A G+ YL       ++H D+  +NVL     +      KISD G+ + +   D  
Sbjct: 133 LVAQIAAGMEYLSSH---HVVHKDLATRNVL-----VYDKLNVKISDLGLFREVYAADYY 184

Query: 652 RTDTN----MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEII--CGRRHIELSRVEEE 705
           +   N    +R      APE +     +   D++S+GV+L E+     + +   S     
Sbjct: 185 KLLGNSLLPIRWM----APEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS----- 235

Query: 706 SEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMA------------MVGLWC 753
                                      + +V+  +   + +             M+  W 
Sbjct: 236 ---------------------------NQDVVEMIRNRQVLPCPDDCPAWVYALMIECW- 267

Query: 754 NHPDPNLRPSMKKVIHMLE 772
            +  P+ RP  K +   L 
Sbjct: 268 -NEFPSRRPRFKDIHSRLR 285

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  119 bits (300), Expect = 7e-30
 Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 22/209 (10%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQI--EIAVKKLEKDIEKTNEEFMT----ELKIIGRTHHK 547
             +G G    VY      +DT +  ++A+K +     +  EE +     E+    +  H+
Sbjct: 17  DKLGGGGMSTVYLA----EDTILNIKVAIKAIFIPP-REKEETLKRFEREVHNSSQLSHQ 71

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           N+V ++    E+D   LV E +   TLS ++            +     +  G+ + H+ 
Sbjct: 72  NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDGIKHAHDM 130

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR-GTMGYVAP 666
              +I+H DIKPQN+L+D     +N   KI DFGI+K L+ + + T TN   GT+ Y +P
Sbjct: 131 ---RIVHRDIKPQNILID-----SNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFSP 181

Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           E  +        D++S G++L E++ G  
Sbjct: 182 EQAKGEATDECTDIYSIGIVLYEMLVGEP 210

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  119 bits (301), Expect = 8e-30
 Identities = 65/340 (19%), Positives = 119/340 (35%), Gaps = 63/340 (18%)

Query: 453 YYSPAARGLIKRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLK 512
           ++   + G  +   YF  + + I+ + + F           + +G G    V        
Sbjct: 6   HHHHHSSG--RENLYFQGHMVIIDNKHYLFI----------QKLGEGGFSYVDLV--EGL 51

Query: 513 DTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR----LLVYEL 568
                 A+K++    ++  EE   E  +    +H N++RL+ +C  E        L+   
Sbjct: 52  HDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPF 111

Query: 569 MPNGTLSNFLFHEGQRPGWVQRVEIA---LGVARGLLYLHEECETQIIHCDIKPQNVLLD 625
              GTL N +     +  ++   +I    LG+ RGL  +H        H D+KP N+L  
Sbjct: 112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNIL-- 166

Query: 626 LKTLDTNYMAKISDFGISKLLNKDQTRT--------DTNMRGTMGYVAPEWL---RNVPV 674
              L       + D G           +            R T+ Y APE      +  +
Sbjct: 167 ---LGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVI 223

Query: 675 TTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVI--SCMLSRNLQVLVSH 732
             + DV+S G +L  ++ G    ++   + +S  +  V +   I  S   S  L  L++ 
Sbjct: 224 DERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL-AVQNQLSIPQSPRHSSALWQLLN- 281

Query: 733 DPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
                                   DP+ RP +  ++  LE
Sbjct: 282 -------------------SMMTVDPHQRPHIPLLLSQLE 302

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  120 bits (304), Expect = 1e-29
 Identities = 68/302 (22%), Positives = 121/302 (40%), Gaps = 51/302 (16%)

Query: 422 KKKNNFNSRLLLKIGFIFSAICALLSGVAAIYYSPAARGLIKRRNYFDPNSMEINFREFT 481
              ++ +  +       F+ +          ++            YF      ++  E  
Sbjct: 5   HHHHHHDYDIPTTENLYFNGMGYYHH-----HHHHDYDIPTTENLYFQGMLAGVSEYELP 59

Query: 482 FQ---ELQEATKGFSKLVGTGSSGKVYRGILR-----LKDTQIEIAVKKL-EKDIEKTNE 532
                EL        K +G G+ G+V             +   ++AVK L     EK   
Sbjct: 60  EDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS 119

Query: 533 EFMTELKI---IGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL----------- 578
           + ++E+++   IG+  HKN++ LLG C+++    ++ E    G L  +L           
Sbjct: 120 DLISEMEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 177

Query: 579 FHEGQRPGWV----QRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM 634
           ++    P         V  A  VARG+ YL  +   + IH D+  +NVL     +  + +
Sbjct: 178 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL-----VTEDNV 229

Query: 635 AKISDFGISKLLNKDQTRTDTNMRGTMGYV-----APEWLRNVPVTTKVDVFSFGVMLLE 689
            KI+DFG+++ ++      D   + T G +     APE L +   T + DV+SFGV+L E
Sbjct: 230 MKIADFGLARDIHHI----DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE 285

Query: 690 II 691
           I 
Sbjct: 286 IF 287

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  120 bits (303), Expect = 1e-29
 Identities = 73/331 (22%), Positives = 124/331 (37%), Gaps = 97/331 (29%)

Query: 492 FSKLVGTGSSGKVYRGILR-----LKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGR-T 544
             K +G G  G+V                + +AVK L+ D  EK   + ++E++++    
Sbjct: 85  LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 144

Query: 545 HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL---------------FHEGQRPGWVQ 589
            HKN++ LLG C+++    ++ E    G L  +L                   ++  +  
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204

Query: 590 RVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
            V     +ARG+ YL  +   + IH D+  +NVL     +  N + KI+DFG+++ +N  
Sbjct: 205 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVL-----VTENNVMKIADFGLARDINNI 256

Query: 650 QTRTDTNMRGTMGYV-----APEWLRNVPVTTKVDVFSFGVMLLEII-------CGRRHI 697
               D   + T G +     APE L +   T + DV+SFGV++ EI         G    
Sbjct: 257 ----DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV- 311

Query: 698 ELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMA---------- 747
                                                E+   L+   RM           
Sbjct: 312 ------------------------------------EELFKLLKEGHRMDKPANCTNELY 335

Query: 748 --MVGLWCNHPDPNLRPSMKKVIHMLEGTLE 776
             M    C H  P+ RP+ K+++  L+  L 
Sbjct: 336 MMM--RDCWHAVPSQRPTFKQLVEDLDRILT 364

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  118 bits (299), Expect = 1e-29
 Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 27/210 (12%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F +++G+G+  +V+      + T    A+K ++K     +     E+ ++ +  H+N+V 
Sbjct: 13  FMEVLGSGAFSEVFLVKQ--RLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVT 70

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR--------VEIALGVARGLLY 603
           L           LV +L+  G L + +         ++R          +   V   + Y
Sbjct: 71  LEDIYESTTHYYLVMQLVSGGELFDRI---------LERGVYTEKDASLVIQQVLSAVKY 121

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           LHE     I+H D+KP+N+L    T + N    I+DFG+SK+       T     GT GY
Sbjct: 122 LHEN---GIVHRDLKPENLLY--LTPEENSKIMITDFGLSKMEQNGIMST---ACGTPGY 173

Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           VAPE L   P +  VD +S GV+   ++CG
Sbjct: 174 VAPEVLAQKPYSKAVDCWSIGVITYILLCG 203

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  118 bits (298), Expect = 1e-29
 Identities = 47/225 (20%), Positives = 96/225 (42%), Gaps = 36/225 (16%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLE-KDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           + +G G  G V+    + K      A+K++   + E   E+ M E+K + +  H  +VR 
Sbjct: 11  QCLGRGGFGVVFEA--KNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRY 68

Query: 553 LGFCSEED---------KRLLVY---ELMPNGTLSNFLFH--EGQRPGWVQRVEIALGVA 598
                E++          ++ +Y   +L     L +++      +       + I L +A
Sbjct: 69  FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128

Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR 658
             + +LH +    ++H D+KP N+         + + K+ DFG+   +++D+        
Sbjct: 129 EAVEFLHSK---GLMHRDLKPSNIFFT-----MDDVVKVGDFGLVTAMDQDEEEQTVLTP 180

Query: 659 -----------GTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC 692
                      GT  Y++PE +     + KVD+FS G++L E++ 
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY 225

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  119 bits (300), Expect = 2e-29
 Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 39/227 (17%)

Query: 492 FSKLVGTGSSGKVYRGILR-----LKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGR-T 544
             K +G G+ G+V                + +AVK L+ D  EK   + ++E++++    
Sbjct: 39  LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98

Query: 545 HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL---------------FHEGQRPGWVQ 589
            HKN++ LLG C+++    ++ E    G L  +L                   ++  +  
Sbjct: 99  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158

Query: 590 RVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
            V     +ARG+ YL  +   + IH D+  +NVL     +  N + KI+DFG+++ +N  
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVL-----VTENNVMKIADFGLARDINNI 210

Query: 650 QTRTDTNMRGTMGYV-----APEWLRNVPVTTKVDVFSFGVMLLEII 691
               D   + T G +     APE L +   T + DV+SFGV++ EI 
Sbjct: 211 ----DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  119 bits (300), Expect = 2e-29
 Identities = 71/338 (21%), Positives = 116/338 (34%), Gaps = 105/338 (31%)

Query: 492 FSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKI---IGRT 544
           F K++G+G+ GKV       +      I++AVK L++       E  M+ELK+   +G  
Sbjct: 49  FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS- 107

Query: 545 HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL----------------------FHEG 582
            H+N+V LLG C+      L++E    G L N+L                        + 
Sbjct: 108 -HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166

Query: 583 QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI 642
               +   +  A  VA+G+ +L  +     +H D+  +NVL+         + KI DFG+
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVT-----HGKVVKICDFGL 218

Query: 643 SKLLNKDQTRTDTNMRGTMGYV-----APEWLRNVPVTTKVDVFSFGVMLLEII------ 691
           ++ +  D       +      +     APE L     T K DV+S+G++L EI       
Sbjct: 219 ARDIMSD----SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274

Query: 692 -CGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMA--- 747
             G                                    +  D      ++   +M    
Sbjct: 275 YPG------------------------------------IPVDANFYKLIQNGFKMDQPF 298

Query: 748 ---------MVGLWCNHPDPNLRPSMKKVIHMLEGTLE 776
                    M   W    D   RPS   +   L   L 
Sbjct: 299 YATEEIYIIMQSCW--AFDSRKRPSFPNLTSFLGCQLA 334

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  119 bits (300), Expect = 2e-29
 Identities = 62/297 (20%), Positives = 104/297 (35%), Gaps = 51/297 (17%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVK-----KLEKDIEKTNEEFMTELKIIGRTHH 546
             +++G G    V R I   ++T  + AVK     K       + E+   E  I     H
Sbjct: 28  LCEVIGKGPFSVVRRCIN--RETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85

Query: 547 KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGW---VQRVEIALGVARGLLY 603
            ++V LL   S +    +V+E M    L   +                     +   L Y
Sbjct: 86  PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
            H+     IIH D+KP  VLL  K  + +   K+  FG++  L +          GT  +
Sbjct: 146 CHDN---NIIHRDVKPHCVLLASK--ENSAPVKLGGFGVAIQLGESGLVA-GGRVGTPHF 199

Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEIICGR-----------RHIELSRVEEESEEVDIV 712
           +APE ++  P    VDV+  GV+L  ++ G              I   + +    +   +
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHI 259

Query: 713 LSDW---VISCMLSRN-------LQVL-------------VSHDPEVLSDLERFERM 746
            S+    ++  ML  +        + L               H PE +  L +F   
Sbjct: 260 -SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNAR 315

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  118 bits (297), Expect = 3e-29
 Identities = 56/232 (24%), Positives = 108/232 (46%), Gaps = 44/232 (18%)

Query: 492 FSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHK 547
             K +G G  GKV +     L+ +     +AVK L+++       + ++E  ++ + +H 
Sbjct: 27  LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-----------------------FHEGQR 584
           ++++L G CS++   LL+ E    G+L  FL                         + + 
Sbjct: 87  HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146

Query: 585 PGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK 644
                 +  A  +++G+ YL E    +++H D+  +N+L     +      KISDFG+S+
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNIL-----VAEGRKMKISDFGLSR 198

Query: 645 LLNKDQTRTDTNMRGTMGYV-----APEWLRNVPVTTKVDVFSFGVMLLEII 691
            + ++    D+ ++ + G +     A E L +   TT+ DV+SFGV+L EI+
Sbjct: 199 DVYEE----DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  117 bits (295), Expect = 3e-29
 Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 23/203 (11%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKK--LEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           +G G+SG VY        T  E+A+++  L++  +K  E  + E+ ++    + N+V  L
Sbjct: 28  IGQGASGTVYTA--MDVATGQEVAIRQMNLQQQPKK--ELIINEILVMRENKNPNIVNYL 83

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLHEECET 610
                 D+  +V E +  G+L++ +         +   +IA       + L +LH     
Sbjct: 84  DSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHSN--- 135

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
           Q+IH DIK  N+L     L  +   K++DFG    +  +Q++  T M GT  ++APE + 
Sbjct: 136 QVIHRDIKSDNIL-----LGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVT 189

Query: 671 NVPVTTKVDVFSFGVMLLEIICG 693
                 KVD++S G+M +E+I G
Sbjct: 190 RKAYGPKVDIWSLGIMAIEMIEG 212

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  117 bits (296), Expect = 3e-29
 Identities = 74/330 (22%), Positives = 120/330 (36%), Gaps = 95/330 (28%)

Query: 492 FSKLVGTGSSGKVYRGILR---LKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGR-THH 546
             K +G G+ G+V            T   +AVK L++      +   M+ELKI+    HH
Sbjct: 31  LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90

Query: 547 KNLVRLLGFCSEEDK-RLLVYELMPNGTLSNFL---------------FHEGQRPGWVQR 590
            N+V LLG C++     +++ E    G LS +L                           
Sbjct: 91  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150

Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
           +  +  VA+G+ +L      + IH D+  +N+L     L    + KI DFG+++ + KD 
Sbjct: 151 ICYSFQVAKGMEFLASR---KCIHRDLAARNIL-----LSEKNVVKICDFGLARDIYKD- 201

Query: 651 TRTDTNMRGTMGYV-----APEWLRNVPVTTKVDVFSFGVMLLEII-------CGRRHIE 698
                 +R     +     APE + +   T + DV+SFGV+L EI         G     
Sbjct: 202 ---PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG----- 253

Query: 699 LSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMA----------- 747
                                          V  D E    L+   RM            
Sbjct: 254 -------------------------------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQ 282

Query: 748 -MVGLWCNHPDPNLRPSMKKVIHMLEGTLE 776
            M+  W  H +P+ RP+  +++  L   L+
Sbjct: 283 TMLDCW--HGEPSQRPTFSELVEHLGNLLQ 310

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  118 bits (298), Expect = 4e-29
 Identities = 60/296 (20%), Positives = 120/296 (40%), Gaps = 36/296 (12%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRL 552
             +G G+ G V++     K + + +A K +  +I      + + EL+++   +   +V  
Sbjct: 39  SELGAGNGGVVFKV--SHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGF 96

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQI 612
            G    + +  +  E M  G+L   L   G+ P  +    +++ V +GL YL E+   +I
Sbjct: 97  YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK-VSIAVIKGLTYLREKH--KI 153

Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV 672
           +H D+KP N+L++     +    K+ DFG+S  L      +     GT  Y++PE L+  
Sbjct: 154 MHRDVKPSNILVN-----SRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGT 205

Query: 673 PVTTKVDVFSFGVMLLEIICGR--RHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLV 730
             + + D++S G+ L+E+  GR       ++  E      +               + L 
Sbjct: 206 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN 265

Query: 731 SHDPEVLSDLERFERMAMV----------GLW----------CNHPDPNLRPSMKK 766
               +    +  FE +  +          G++          C   +P  R  +K+
Sbjct: 266 KFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQ 321

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  117 bits (295), Expect = 4e-29
 Identities = 53/201 (26%), Positives = 99/201 (49%), Gaps = 19/201 (9%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G GS+G V     R K +  ++AVK ++   ++  E    E+ I+    H N+V +   
Sbjct: 53  IGEGSTGIVCLA--REKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLHEECETQI 612
               ++  ++ E +  G L++ +         +   +IA     V + L YLH +    +
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIV-----SQVRLNEEQIATVCEAVLQALAYLHAQ---GV 162

Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV 672
           IH DIK  ++L     L  +   K+SDFG    ++KD  +  + + GT  ++APE +   
Sbjct: 163 IHRDIKSDSIL-----LTLDGRVKLSDFGFCAQISKDVPKRKS-LVGTPYWMAPEVISRS 216

Query: 673 PVTTKVDVFSFGVMLLEIICG 693
              T+VD++S G+M++E++ G
Sbjct: 217 LYATEVDIWSLGIMVIEMVDG 237

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  121 bits (305), Expect = 6e-29
 Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 30/232 (12%)

Query: 477 FREFTFQELQEATKG---FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNE 532
           F ++ + E Q   +      +++G G  G+V+    ++K T    A KKL K  ++K   
Sbjct: 171 FLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVF--ACQMKATGKLYACKKLNKKRLKKRKG 228

Query: 533 EFMT--ELKIIGRTHHKNLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGW-- 587
                 E KI+ + H + +V L  +  E    L LV  +M  G +   +++  +      
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSLA-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQ 287

Query: 588 VQRV-----EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI 642
             R      +I  G    L +LH+     II+ D+KP+NVLLD    D     +ISD G+
Sbjct: 288 EPRAIFYTAQIVSG----LEHLHQR---NIIYRDLKPENVLLD----DDGN-VRISDLGL 335

Query: 643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           +  L   QT+T     GT G++APE L        VD F+ GV L E+I  R
Sbjct: 336 AVELKAGQTKTKG-YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  116 bits (293), Expect = 6e-29
 Identities = 50/233 (21%), Positives = 92/233 (39%), Gaps = 50/233 (21%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
            ++G G+ G+V +   R        A+KK+    E+     ++E+ ++   +H+ +VR  
Sbjct: 12  AVLGQGAFGQVVKA--RNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYY 68

Query: 554 GFCSEEDKRL-------------LVYELMPNGTLS------NFLFHEGQRPGWVQRVEIA 594
               E    +             +  E   NGTL       N      +     +  +I 
Sbjct: 69  AAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR--QIL 126

Query: 595 LGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD 654
             ++    Y+H +    IIH D+KP N+      +D +   KI DFG++K +++      
Sbjct: 127 EALS----YIHSQ---GIIHRDLKPMNIF-----IDESRNVKIGDFGLAKNVHRSLDILK 174

Query: 655 TNMR-------------GTMGYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICG 693
            + +             GT  YVA E L        K+D++S G++  E+I  
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP 227

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  115 bits (290), Expect = 1e-28
 Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 20/207 (9%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTN--EEFMTELKIIGRTHHKNLV 550
            L+G GS   VYR       T +E+A+K ++K  + K    +    E+KI  +  H +++
Sbjct: 17  NLLGKGSFAGVYRA--ESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSIL 74

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIA---LGVARGLLYLHEE 607
            L  +  + +   LV E+  NG ++ +L     R       E       +  G+LYLH  
Sbjct: 75  ELYNYFEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQIITGMLYLHSH 131

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               I+H D+   N+LL       N   KI+DFG++  L     +  T + GT  Y++PE
Sbjct: 132 ---GILHRDLTLSNLLLT-----RNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPE 182

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
                    + DV+S G M   ++ GR
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGR 209

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  117 bits (294), Expect = 1e-28
 Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 44/232 (18%)

Query: 492 FSKLVGTGSSGKVYRGILR---LKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHK 547
           + + +G G+ G+V++         +    +AVK L+++       +F  E  ++    + 
Sbjct: 51  YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 110

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFL-----------------------FHEGQR 584
           N+V+LLG C+      L++E M  G L+ FL                             
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170

Query: 585 PGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK 644
               +++ IA  VA G+ YL E    + +H D+  +N L     +  N + KI+DFG+S 
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCL-----VGENMVVKIADFGLS- 221

Query: 645 LLNKDQTRTDTNMRGTMGYV-----APEWLRNVPVTTKVDVFSFGVMLLEII 691
              ++    D         +      PE +     TT+ DV+++GV+L EI 
Sbjct: 222 ---RNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  116 bits (293), Expect = 2e-28
 Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 42/228 (18%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-------DIEKTNEEFMT---------- 536
           + +  G   K+       +      A+KK EK       D  K+N + ++          
Sbjct: 37  RTLNQGKFNKIILC----EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKN 92

Query: 537 ELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG 596
           EL+II    ++  +   G  +  D+  ++YE M N ++  F  +            I + 
Sbjct: 93  ELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFF-VLDKNYTCFIPIQ 151

Query: 597 VAR--------GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK 648
           V +           Y+H E    I H D+KP N+L     +D N   K+SDFG S+ +  
Sbjct: 152 VIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNIL-----MDKNGRVKLSDFGESEYMVD 204

Query: 649 DQTRTDTNMRGTMGYVAPEWLRNVPVT--TKVDVFSFGVMLLEIICGR 694
            + +     RGT  ++ PE+  N       KVD++S G+ L  +    
Sbjct: 205 KKIKG---SRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV 249

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  116 bits (292), Expect = 2e-28
 Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 15/204 (7%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTN--EEFMTELKIIGRTHHKNLV 550
           + +G G   K +       DT+   A K + K  + K +  E+   E+ I     H+++V
Sbjct: 47  RFLGKGGFAKCFEI--SDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 104

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
              GF  + D   +V EL    +L               R      +  G  YLH     
Sbjct: 105 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY-YLRQIVLGCQYLHRN--- 160

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
           ++IH D+K  N+ L+      +   KI DFG++  +  D  R    + GT  Y+APE L 
Sbjct: 161 RVIHRDLKLGNLFLN-----EDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLS 214

Query: 671 NVPVTTKVDVFSFGVMLLEIICGR 694
               + +VDV+S G ++  ++ G+
Sbjct: 215 KKGHSFEVDVWSIGCIMYTLLVGK 238

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  114 bits (287), Expect = 4e-28
 Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 21/207 (10%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTN--EEFMTELKIIGRTHHKNLV 550
           + +G G   K +       DT+   A K + K  + K +  E+   E+ I     H+++V
Sbjct: 21  RFLGKGGFAKCFEI--SDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 78

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIA---LGVARGLLYLHEE 607
              GF  + D   +V EL    +L        +R   +   E       +  G  YLH  
Sbjct: 79  GFHGFFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRN 134

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              ++IH D+K  N+ L+      +   KI DFG++  +  D  R    + GT  Y+APE
Sbjct: 135 ---RVIHRDLKLGNLFLN-----EDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPE 185

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            L     + +VDV+S G ++  ++ G+
Sbjct: 186 VLSKKGHSFEVDVWSIGCIMYTLLVGK 212

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  114 bits (288), Expect = 6e-28
 Identities = 61/252 (24%), Positives = 90/252 (35%), Gaps = 57/252 (22%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVK-----KLEKDIEKTNEEFMTELKIIGRTHH 546
               +G GS G V   I     T+   A+K     K+ +   K  E   TE++++ + HH
Sbjct: 30  LKGAIGQGSYGVVRVAIE--NQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87

Query: 547 KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG---------- 596
            N+ RL     +E    LV EL   G L + L            +++             
Sbjct: 88  PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147

Query: 597 -----------------------------VARGLLYLHEECETQIIHCDIKPQNVLLDLK 627
                                        +   L YLH +    I H DIKP+N L    
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFST- 203

Query: 628 TLDTNYMAKISDFGISKLLNKDQTRTDTNMR---GTMGYVAPEWLRNV--PVTTKVDVFS 682
             + ++  K+ DFG+SK   K        M    GT  +VAPE L         K D +S
Sbjct: 204 --NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261

Query: 683 FGVMLLEIICGR 694
            GV+L  ++ G 
Sbjct: 262 AGVLLHLLLMGA 273

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  117 bits (294), Expect = 7e-28
 Identities = 65/242 (26%), Positives = 109/242 (45%), Gaps = 25/242 (10%)

Query: 463 KRRNYFDPNSMEINFREFTFQELQEATKG--FSKLVGTGSSGKVYRGILRLKDTQIEIAV 520
            R N +    ++     F   +    ++     K +G+G+ G+V       K T +E A+
Sbjct: 10  GRENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRD--KVTHVERAI 67

Query: 521 KKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTL---- 574
           K + K      +N + + E+ ++    H N+++L  F  ++    LV E    G L    
Sbjct: 68  KIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI 127

Query: 575 -SNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNY 633
                F+E      V    I   V  G+ YLH+     I+H D+KP+N+LL+ K  + + 
Sbjct: 128 IHRMKFNE------VDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESK--EKDA 176

Query: 634 MAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           + KI DFG+S +    +   +    GT  Y+APE LR      K DV+S GV+L  ++ G
Sbjct: 177 LIKIVDFGLSAVFENQKKMKE--RLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAG 233

Query: 694 RR 695
             
Sbjct: 234 YP 235

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  113 bits (285), Expect = 1e-27
 Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 21/210 (10%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEE--FMTELKIIGRTHHKN 548
           F K++G GS   V   + R   T  E A+K LEK  I K N+      E  ++ R  H  
Sbjct: 34  FGKILGEGSFSTVV--LARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV---EIALGVARGLLYLH 605
            V+L     +++K         NG L  ++   G       R    EI       L YLH
Sbjct: 92  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA----LEYLH 147

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYV 664
            +    IIH D+KP+N+LL+      +   +I+DFG +K+L+ +  +   N   GT  YV
Sbjct: 148 GK---GIIHRDLKPENILLN-----EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 199

Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           +PE L         D+++ G ++ +++ G 
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGL 229

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  114 bits (287), Expect = 1e-27
 Identities = 36/271 (13%), Positives = 73/271 (26%), Gaps = 63/271 (23%)

Query: 470 PNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK---- 525
                        +  +   +G   ++G              ++T     V         
Sbjct: 57  NTGQPFRVESELGERPRTLVRG--TVLGQEDPYAYLEA--TDQETGESFEVHVPYFTERP 112

Query: 526 ---DIEKTNEE---------------------FMTELKIIGRTHHKNLVRLLGFCSEED- 560
               I++  EE                     F+    ++     K ++R+     +   
Sbjct: 113 PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWV 172

Query: 561 -KRLLVYELM--PNGTLSNFLFHEGQRPG---WVQRVEIALGVARGLLYLHEECETQIIH 614
             R  +Y  M     T    L              R+++ L V R L  LH      ++H
Sbjct: 173 LSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVH 229

Query: 615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL----- 669
             ++P +++     LD      ++ F                   + G+  PE       
Sbjct: 230 TYLRPVDIV-----LDQRGGVFLTGFEHLVRDGARVV-----SSVSRGFEPPELEARRAT 279

Query: 670 ------RNVPVTTKVDVFSFGVMLLEIICGR 694
                 R   +T   D ++ G+++  I C  
Sbjct: 280 ISYHRDRRTLMTFSFDAWALGLVIYWIWCAD 310

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  113 bits (285), Expect = 2e-27
 Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 28/210 (13%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
               +G G++  VYR   + K TQ   A+K L+K ++K  +   TE+ ++ R  H N+++
Sbjct: 57  VESELGRGATSIVYRC--KQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIK 112

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR--------VEIALGVARGLLY 603
           L        +  LV EL+  G L + +         V++         +    +   + Y
Sbjct: 113 LKEIFETPTEISLVLELVTGGELFDRI---------VEKGYYSERDAADAVKQILEAVAY 163

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           LHE     I+H D+KP+N+L    T   +   KI+DFG+SK++          + GT GY
Sbjct: 164 LHEN---GIVHRDLKPENLLY--ATPAPDAPLKIADFGLSKIVEHQVLMKT--VCGTPGY 216

Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
            APE LR      +VD++S G++   ++CG
Sbjct: 217 CAPEILRGCAYGPEVDMWSVGIITYILLCG 246

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  111 bits (281), Expect = 2e-27
 Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 28/212 (13%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNL 549
             + +G G+   V R +   K T +E A K +       +  ++   E +I  +  H N+
Sbjct: 10  VKEELGKGAFSVVRRCVH--KTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV--------EIALGVARGL 601
           VRL     EE    LV++L+  G L   +         V R              +   +
Sbjct: 68  VRLHDSIQEESFHYLVFDLVTGGELFEDI---------VAREFYSEADASHCIQQILESI 118

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            Y H      I+H ++KP+N+LL  K        K++DFG++  +N  +        GT 
Sbjct: 119 AYCHSN---GIVHRNLKPENLLLASKAKGAA--VKLADFGLAIEVNDSEAWHG--FAGTP 171

Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           GY++PE L+  P +  VD+++ GV+L  ++ G
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  117 bits (294), Expect = 2e-27
 Identities = 73/238 (30%), Positives = 116/238 (48%), Gaps = 32/238 (13%)

Query: 471 NSMEIN-FREFTFQELQEATKG---FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD 526
           +S+  N F ++ + E Q  TK      +++G G  G+V     +++ T    A KKLEK 
Sbjct: 163 DSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVC--ACQVRATGKMYACKKLEKK 220

Query: 527 -IEKTNEEFMT--ELKIIGRTHHKNLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEG 582
            I+K   E M   E +I+ + + + +V L  +  E    L LV  LM  G L   ++H G
Sbjct: 221 RIKKRKGEAMALNEKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMG 279

Query: 583 QRPGWVQRV-----EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI 637
           Q      R      EI  G    L  LH E   +I++ D+KP+N+LLD    D  +  +I
Sbjct: 280 QAGFPEARAVFYAAEICCG----LEDLHRE---RIVYRDLKPENILLD----DHGH-IRI 327

Query: 638 SDFGISK-LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           SD G++  +      +      GT+GY+APE ++N   T   D ++ G +L E+I G+
Sbjct: 328 SDLGLAVHVPEGQTIKG---RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  115 bits (291), Expect = 2e-27
 Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 31/215 (14%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNL 549
              ++G GS G+V +     + TQ E AVK + K     K     + E++++ +  H N+
Sbjct: 26  IVCMLGKGSFGEVLKCKD--RITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARGLL-- 602
           ++L     +     +V EL   G L         F E            A  + + +   
Sbjct: 84  MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHD----------AARIIKQVFSG 133

Query: 603 --YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
             Y+H+     I+H D+KP+N+LL+ K  + +   KI DFG+S    ++    D    GT
Sbjct: 134 ITYMHKH---NIVHRDLKPENILLESK--EKDCDIKIIDFGLSTCFQQNTKMKD--RIGT 186

Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
             Y+APE LR      K DV+S GV+L  ++ G  
Sbjct: 187 AYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTP 220

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  115 bits (291), Expect = 2e-27
 Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 24/211 (11%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD---IEKTNEEFMTELKIIGRTHHKN 548
             +++G GS G+V       K T  E AVK + K     +   E  + E++++ +  H N
Sbjct: 30  GQRVLGKGSFGEVILCKD--KITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARGLLY 603
           +++L  F  ++    LV E+   G L     S   F E      V    I   V  G+ Y
Sbjct: 88  IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE------VDAARIIRQVLSGITY 141

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           +H+    +I+H D+KP+N+LL+ K    +   +I DFG+S      +   D    GT  Y
Sbjct: 142 MHKN---KIVHRDLKPENLLLESK--SKDANIRIIDFGLSTHFEASKKMKD--KIGTAYY 194

Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           +APE L       K DV+S GV+L  ++ G 
Sbjct: 195 IAPEVLHG-TYDEKCDVWSTGVILYILLSGC 224

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  111 bits (280), Expect = 2e-27
 Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 14/206 (6%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE-FMTELKIIGRTHHKNLV 550
           F + +G+G+ G V+      + + +E  +K + KD  +   E    E++++    H N++
Sbjct: 26  FKRKLGSGAFGDVHLV--EERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLHEE 607
           ++     +     +V E    G L   +     R   +    +A     +   L Y H +
Sbjct: 84  KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               ++H D+KP+N+L        +   KI DFG+++L   D+  T+    GT  Y+APE
Sbjct: 144 ---HVVHKDLKPENILFQDT--SPHSPIKIIDFGLAELFKSDEHSTN--AAGTALYMAPE 196

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
             +   VT K D++S GV++  ++ G
Sbjct: 197 VFKR-DVTFKCDIWSAGVVMYFLLTG 221

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score =  111 bits (281), Expect = 3e-27
 Identities = 55/211 (26%), Positives = 90/211 (42%), Gaps = 26/211 (12%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIE--IAVKKLEKDIEKTNEEFMT----ELKIIGRTHHK 547
           +LVG G  G VY      +DT  E  +A+K + + +  ++  F T    E +  GR    
Sbjct: 40  RLVGRGGMGDVYEA----EDTVRERIVALKLMSETL-SSDPVFRTRMQREARTAGRLQEP 94

Query: 548 NLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQR-VEIALGVARGLLYLH 605
           ++V +  F  E D +L +   L+    L+  L  +G       R V I   +   L   H
Sbjct: 95  HVVPIHDF-GEIDGQLYVDMRLINGVDLAAMLRRQGPLA--PPRAVAIVRQIGSALDAAH 151

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR-GTMGYV 664
                   H D+KP+N+L+       +  A + DFGI+     D+  T      GT+ Y+
Sbjct: 152 AA---GATHRDVKPENILVS-----ADDFAYLVDFGIASATT-DEKLTQLGNTVGTLYYM 202

Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           APE       T + D+++   +L E + G  
Sbjct: 203 APERFSESHATYRADIYALTCVLYECLTGSP 233

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  116 bits (293), Expect = 3e-27
 Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 29/212 (13%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTE-----LKIIGRTHHK 547
           +++G G  G+VY    R  DT    A+K L+K  I+    E +       L ++      
Sbjct: 195 RIIGRGGFGEVY--GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCP 252

Query: 548 NLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRV---EIALGVARGLLY 603
            +V +  +      +L  + +LM  G L   L   G       R    EI LG    L +
Sbjct: 253 FIVCM-SYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG----LEH 307

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           +H      +++ D+KP N+LLD    +  ++ +ISD G++   +K +        GT GY
Sbjct: 308 MHNR---FVVYRDLKPANILLD----EHGHV-RISDLGLACDFSKKKPHA---SVGTHGY 356

Query: 664 VAPEWL-RNVPVTTKVDVFSFGVMLLEIICGR 694
           +APE L + V   +  D FS G ML +++ G 
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  110 bits (277), Expect = 6e-27
 Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 23/209 (11%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLL 553
           +G G+ G V +   R   +   +AVK++   +  +  +  + +L I  RT      V   
Sbjct: 15  LGRGAYGVVEKM--RHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 72

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVE---IALGVARGLLYLHEECET 610
           G    E    +  ELM + +L  F      +   +       IA+ + + L +LH +   
Sbjct: 73  GALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--L 129

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS-KLLNKDQTRTDTNMRGTMGYVAPE-- 667
            +IH D+KP NVL     ++     K+ DFGIS  L++      D    G   Y+APE  
Sbjct: 130 SVIHRDVKPSNVL-----INALGQVKMCDFGISGYLVDDVAKDIDA---GCKPYMAPERI 181

Query: 668 --WLRNVPVTTKVDVFSFGVMLLEIICGR 694
              L     + K D++S G+ ++E+   R
Sbjct: 182 NPELNQKGYSVKSDIWSLGITMIELAILR 210

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  112 bits (281), Expect = 6e-27
 Identities = 28/237 (11%), Positives = 62/237 (26%), Gaps = 50/237 (21%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN---EEFMTELKIIGRTHHKNLV 550
           + +  G    V+    R  +   + A+K      E +    E          R   ++  
Sbjct: 68  EPLRVGDRSVVFLV--RDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPE 125

Query: 551 RLLGFC----------------------SEEDKR----LLVYELM-----PNGTLSNFLF 579
                                        ++D      LL+            +  +F++
Sbjct: 126 EARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVY 185

Query: 580 HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD 639
                 G +    +   + R    L  +    ++H    P N+      +  +    + D
Sbjct: 186 VFRGDEGILALHILTAQLIRLAANLQSKG---LVHGHFTPDNLF-----IMPDGRLMLGD 237

Query: 640 FGISKLLNKDQTRTDTNMRGTMGYVAPEWL--RNVPVTTKVDVFSFGVMLLEIICGR 694
                   K  TR        + Y   E+L       T  ++ +  G+ +  + C  
Sbjct: 238 VSALW---KVGTRGPA-SSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF 290

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  110 bits (278), Expect = 6e-27
 Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 22/206 (10%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGF 555
           +G G+ GKVY+   + K+T    A K +E   E+  E+++ E++I+    H  +V+LLG 
Sbjct: 27  LGDGAFGKVYKA--KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 84

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLHEECETQI 612
              + K  ++ E  P G +   +         +   +I +    +   L +LH +   +I
Sbjct: 85  YYHDGKLWIMIEFCPGGAVDAIMLE---LDRGLTEPQIQVVCRQMLEALNFLHSK---RI 138

Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE----- 667
           IH D+K  NVL     +      +++DFG+S    K   + D+   GT  ++APE     
Sbjct: 139 IHRDLKAGNVL-----MTLEGDIRLADFGVSAKNLKTLQKRDS-FIGTPYWMAPEVVMCE 192

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICG 693
            +++ P   K D++S G+ L+E+   
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEMAQI 218

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  111 bits (279), Expect = 7e-27
 Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 26/211 (12%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLL 553
           +G G+ G V +     K +   +AVK++   + EK  ++ + +L ++ R+     +V+  
Sbjct: 30  IGRGAYGSVNKM--VHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFY 87

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVE------IALGVARGLLYLHEE 607
           G    E    +  ELM + +   F  +          +       I L   + L +L E 
Sbjct: 88  GALFREGDCWICMELM-STSFDKFYKYVYSVLD--DVIPEEILGKITLATVKALNHLKEN 144

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
              +IIH DIKP N+L     LD +   K+ DFGIS  L    +   T   G   Y+APE
Sbjct: 145 --LKIIHRDIKPSNIL-----LDRSGNIKLCDFGISGQL--VDSIAKTRDAGCRPYMAPE 195

Query: 668 ----WLRNVPVTTKVDVFSFGVMLLEIICGR 694
                        + DV+S G+ L E+  GR
Sbjct: 196 RIDPSASRQGYDVRSDVWSLGITLYELATGR 226

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  111 bits (280), Expect = 9e-27
 Identities = 68/300 (22%), Positives = 115/300 (38%), Gaps = 64/300 (21%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNL 549
             + +G G+   V R +   K T +E A K +       +  ++   E +I  +  H N+
Sbjct: 33  VKEELGKGAFSVVRRCVH--KTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 90

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV--------EIALGVARGL 601
           VRL     EE    LV++L+  G L   +         V R              +   +
Sbjct: 91  VRLHDSIQEESFHYLVFDLVTGGELFEDI---------VAREFYSEADASHCIQQILESI 141

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            Y H      I+H ++KP+N+LL  K        K++DFG++  +N  +        GT 
Sbjct: 142 AYCHSN---GIVHRNLKPENLLLASKAKGAA--VKLADFGLAIEVNDSEAWHG--FAGTP 194

Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR------------RHIELSRVEEESEEV 709
           GY++PE L+  P +  VD+++ GV+L  ++ G               I+    +  S E 
Sbjct: 195 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW 254

Query: 710 DIVLSDWV---ISCMLSRN-------LQVL-------------VSHDPEVLSDLERFERM 746
           D V +      I  ML+ N        Q L               H  + +  L++F   
Sbjct: 255 DTV-TPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNAR 313

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score =  110 bits (277), Expect = 9e-27
 Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 26/214 (12%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQI--EIAVKKLEKDIEKTNEEFMT----ELKIIGRTHHK 547
           +++G G   +V+      +D +   ++AVK L  D+   +  F      E +     +H 
Sbjct: 18  EILGFGGMSEVHLA----RDLRDHRDVAVKVLRADL-ARDPSFYLRFRREAQNAAALNHP 72

Query: 548 NLVRLLGFCSEEDKRL----LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLY 603
            +V +      E        +V E +   TL + + H        + +E+     + L +
Sbjct: 73  AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV-HTEGPMTPKRAIEVIADACQALNF 131

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD-QTRTDTNMR-GTM 661
            H+     IIH D+KP N+++           K+ DFGI++ +     + T T    GT 
Sbjct: 132 SHQ---NGIIHRDVKPANIMIS-----ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183

Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
            Y++PE  R   V  + DV+S G +L E++ G  
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 217

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  112 bits (281), Expect = 1e-26
 Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 16/205 (7%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
             + +G+G+ G V+R +   K T      K +             E+ I+ + HH  L+ 
Sbjct: 55  ILEELGSGAFGVVHRCVE--KATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN 112

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L     ++ + +L+ E +  G L + +  E  +    + +        GL ++HE     
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---S 169

Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           I+H DIKP+N++ + K   +    KI DFG++  LN D+         T  + APE +  
Sbjct: 170 IVHLDIKPENIMCETKKASS---VKIIDFGLATKLNPDEIVKV--TTATAEFAAPEIVDR 224

Query: 672 VPVTTKVDVFSFGV---MLLEIICG 693
            PV    D+++ GV   +LL    G
Sbjct: 225 EPVGFYTDMWAIGVLGYVLL---SG 246

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  112 bits (283), Expect = 1e-26
 Identities = 65/300 (21%), Positives = 112/300 (37%), Gaps = 63/300 (21%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE--FMTELKIIGRTHHKNL 549
             + +G G+   V R +        E A   +        +      E +I     H N+
Sbjct: 15  LFEELGKGAFSVVRRCVK--VLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNI 72

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR--------VEIALGVARGL 601
           VRL    SEE    L+++L+  G L   +         V R              +   +
Sbjct: 73  VRLHDSISEEGHHYLIFDLVTGGELFEDI---------VAREYYSEADASHCIQQILEAV 123

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
           L+ H+     ++H ++KP+N+LL  K        K++DFG++  +  +Q        GT 
Sbjct: 124 LHCHQM---GVVHRNLKPENLLLASK--LKGAAVKLADFGLAIEVEGEQQAWFG-FAGTP 177

Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR------------RHIELSRVEEESEEV 709
           GY++PE LR  P    VD+++ GV+L  ++ G             + I+    +  S E 
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEW 237

Query: 710 DIVLSDWV---ISCMLSRN-------LQVL-------------VSHDPEVLSDLERFERM 746
           D V +      I+ ML+ N        + L               H  E +  L++F   
Sbjct: 238 DTV-TPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNAR 296

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  113 bits (284), Expect = 2e-26
 Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 28/219 (12%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-------------DIEKTNEEFMTEL 538
             + +G+G+ G+V     + K+   E A+K ++K             +IEK +EE   E+
Sbjct: 40  KVRKLGSGAYGEVLLC--KEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEI 97

Query: 539 KIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR--VEIALG 596
            ++    H N+++L     ++    LV E    G L   + +  +     +     I   
Sbjct: 98  SLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFD---ECDAANIMKQ 154

Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
           +  G+ YLH+     I+H DIKP+N+LL+ K  ++    KI DFG+S   +KD    D  
Sbjct: 155 ILSGICYLHKH---NIVHRDIKPENILLENK--NSLLNIKIVDFGLSSFFSKDYKLRD-- 207

Query: 657 MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
             GT  Y+APE L+      K DV+S GV++  ++CG  
Sbjct: 208 RLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYP 245

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  109 bits (275), Expect = 2e-26
 Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 21/207 (10%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNL 549
           F  L  +G GS G VY+     K+T   +A+K++   +E   +E + E+ I+ +    ++
Sbjct: 31  FDVLEKLGEGSYGSVYKA--IHKETGQIVAIKQV--PVESDLQEIIKEISIMQQCDSPHV 86

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLHE 606
           V+  G   +     +V E    G++S+ +     R   +   EIA       +GL YLH 
Sbjct: 87  VKYYGSYFKNTDLWIVMEYCGAGSVSDII---RLRNKTLTEDEIATILQSTLKGLEYLHF 143

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
               + IH DIK  N+LL+     T   AK++DFG++  L     + +T + GT  ++AP
Sbjct: 144 M---RKIHRDIKAGNILLN-----TEGHAKLADFGVAGQLTDTMAKRNT-VIGTPFWMAP 194

Query: 667 EWLRNVPVTTKVDVFSFGVMLLEIICG 693
           E ++ +      D++S G+  +E+  G
Sbjct: 195 EVIQEIGYNCVADIWSLGITAIEMAEG 221

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  112 bits (281), Expect = 2e-26
 Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 44/250 (17%)

Query: 469 DPNSMEINFREFTFQELQEATKGF------SKLVGTGSSGKVYRGILRLKDTQIEIAVKK 522
              +    F + T  +     K        SK +G+G+ G+V       + T  ++A++ 
Sbjct: 110 LSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFE--RKTCKKVAIRI 167

Query: 523 LEKD--------IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTL 574
           + K                  TE++I+ + +H  ++++  F  + +   +V ELM  G L
Sbjct: 168 ISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGEL 226

Query: 575 SNFLFHEGQRPGWVQRV--------EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDL 626
            + +         V                +   + YLHE     IIH D+KP+NVLL  
Sbjct: 227 FDKV---------VGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSS 274

Query: 627 KTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV---TTKVDVFSF 683
           +  + + + KI+DFG SK+L +        + GT  Y+APE L +V        VD +S 
Sbjct: 275 Q--EEDCLIKITDFGHSKILGETSLMRT--LCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 330

Query: 684 GVMLLEIICG 693
           GV+L   + G
Sbjct: 331 GVILFICLSG 340

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  108 bits (273), Expect = 2e-26
 Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 23/209 (11%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNL 549
              ++G GS G+V +     + TQ E AVK + K     K     + E++++ +  H N+
Sbjct: 26  IVCMLGKGSFGEVLKCKD--RITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTL-----SNFLFHEGQRPGWVQRVEIALGVARGLLYL 604
           ++L     +     +V EL   G L         F E           I   V  G+ Y+
Sbjct: 84  MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE------HDAARIIKQVFSGITYM 137

Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
           H+     I+H D+KP+N+LL+ K  + +   KI DFG+S    ++    D    GT  Y+
Sbjct: 138 HKH---NIVHRDLKPENILLESK--EKDCDIKIIDFGLSTCFQQNTKMKD--RIGTAYYI 190

Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           APE LR      K DV+S GV+L  ++ G
Sbjct: 191 APEVLRG-TYDEKCDVWSAGVILYILLSG 218

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  109 bits (274), Expect = 2e-26
 Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 24/204 (11%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN---EEFMTELKIIGRTHHKNLVRL 552
           +G GS G+V++GI     TQ  +A+K +  D+E+     E+   E+ ++ +     + + 
Sbjct: 30  IGKGSFGEVFKGID--NRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQCDSPYVTKY 85

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLHEECE 609
            G   ++ K  ++ E +  G+  + L      PG +   +IA     + +GL YLH E  
Sbjct: 86  YGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHSE-- 138

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
            + IH DIK  NVLL       +   K++DFG++  L   Q + +T   GT  ++APE +
Sbjct: 139 -KKIHRDIKAANVLLS-----EHGEVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVI 191

Query: 670 RNVPVTTKVDVFSFGVMLLEIICG 693
           +     +K D++S G+  +E+  G
Sbjct: 192 KQSAYDSKADIWSLGITAIELARG 215

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  113 bits (284), Expect = 2e-26
 Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 10/202 (4%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
             + +GTG+ G V+R     + T    A K +    E   E    E++ +    H  LV 
Sbjct: 161 IHEELGTGAFGVVHRVTE--RATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 218

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L     ++++ +++YE M  G L   +  E  +    + VE    V +GL ++HE     
Sbjct: 219 LHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---N 275

Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
            +H D+KP+N++   K  +     K+ DFG++  L+  Q+       GT  + APE    
Sbjct: 276 YVHLDLKPENIMFTTKRSNE---LKLIDFGLTAHLDPKQSVKV--TTGTAEFAAPEVAEG 330

Query: 672 VPVTTKVDVFSFGVMLLEIICG 693
            PV    D++S GV+   ++ G
Sbjct: 331 KPVGYYTDMWSVGVLSYILLSG 352

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  108 bits (271), Expect = 3e-26
 Identities = 53/205 (25%), Positives = 84/205 (40%), Gaps = 17/205 (8%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
               +G GS G+V       K T+I  A KK+ K   +  + F  E++I+    H N++R
Sbjct: 13  LENTIGRGSWGEVKIA--VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQ---RPGWVQRVEIALGVARGLLYLHEEC 608
           L     +     LV EL   G L   + H+              I   V   + Y H+  
Sbjct: 71  LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRES----DAARIMKDVLSAVAYCHKL- 125

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
              + H D+KP+N L        +   K+ DFG++      +        GT  YV+P+ 
Sbjct: 126 --NVAHRDLKPENFLFLTD--SPDSPLKLIDFGLAARFKPGKMMRT--KVGTPYYVSPQV 179

Query: 669 LRNVPVTTKVDVFSFGVMLLEIICG 693
           L       + D +S GVM+  ++CG
Sbjct: 180 LEG-LYGPECDEWSAGVMMYVLLCG 203

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  110 bits (276), Expect = 3e-26
 Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 36/216 (16%)

Query: 491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLV 550
             ++++G G  G+V++       T +++A K ++    K  EE   E+ ++ +  H NL+
Sbjct: 92  SKTEILGGGRFGQVHKCEE--TATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149

Query: 551 RLLGFCSEEDKRLLVYELMPNGTL------SNFLFHEGQRPGWVQRVEIALGVAR----G 600
           +L      ++  +LV E +  G L       ++   E             +   +    G
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELD----------TILFMKQICEG 199

Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
           + ++H+     I+H D+KP+N+L   +        KI DFG+++     +        GT
Sbjct: 200 IRHMHQM---YILHLDLKPENILCVNRDAKQ---IKIIDFGLARRYKPREKLKV--NFGT 251

Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGV---MLLEIICG 693
             ++APE +    V+   D++S GV   MLL    G
Sbjct: 252 PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLL---SG 284

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  109 bits (274), Expect = 3e-26
 Identities = 53/217 (24%), Positives = 90/217 (41%), Gaps = 37/217 (17%)

Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGR-THHKNL 549
           SK +G G    V + I   K T  E A K L+K    +    E + E+ ++        +
Sbjct: 34  SKELGRGKFAVVRQCIS--KSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRV 91

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALG----------VAR 599
           + L        + +L+ E    G + +           +  +   +           +  
Sbjct: 92  INLHEVYENTSEIILILEYAAGGEIFSLC---------LPELAEMVSENDVIRLIKQILE 142

Query: 600 GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG 659
           G+ YLH+     I+H D+KPQN+LL   ++      KI DFG+S+ +       +  + G
Sbjct: 143 GVYYLHQN---NIVHLDLKPQNILLS--SIYPLGDIKIVDFGMSRKIGHACELRE--IMG 195

Query: 660 TMGYVAPEWLRNVPVTTKVDVFSFGV---MLLEIICG 693
           T  Y+APE L   P+TT  D+++ G+   MLL     
Sbjct: 196 TPEYLAPEILNYDPITTATDMWNIGIIAYMLL---TH 229

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  109 bits (275), Expect = 4e-26
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 27/214 (12%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK------DIEKTNEEFMTELKIIGRTH 545
             + +G+G    V +     K T +E A K ++K            EE   E+ I+ +  
Sbjct: 16  IGEELGSGQFAIVKKCRE--KSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73

Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQ---RPGWVQRVEIALGVARGLL 602
           H N++ L          +L+ EL+  G L +FL  +          +       +  G+ 
Sbjct: 74  HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE----EATSFIKQILDGVN 129

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           YLH +   +I H D+KP+N++L  K +      K+ DFG++  +       +  + GT  
Sbjct: 130 YLHTK---KIAHFDLKPENIMLLDKNIP-IPHIKLIDFGLAHEIEDGVEFKN--IFGTPE 183

Query: 663 YVAPEWLRNVPVTTKVDVFSFGV---MLLEIICG 693
           +VAPE +   P+  + D++S GV   +LL    G
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILL---SG 214

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  108 bits (271), Expect = 4e-26
 Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 45/226 (19%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK---------DIEKTNEEFMTELKIIG 542
             +++G G S  V R I   K T  E AVK ++          ++++  E  + E+ I+ 
Sbjct: 21  PKEILGRGVSSVVRRCIH--KPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78

Query: 543 R-THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV--------EI 593
           + + H N+++L           LV++LM  G L ++L          ++V        +I
Sbjct: 79  KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---------TEKVTLSEKETRKI 129

Query: 594 ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT 653
              +   +  LH+     I+H D+KP+N+L     LD +   K++DFG S  L+  +   
Sbjct: 130 MRALLEVICALHKL---NIVHRDLKPENIL-----LDDDMNIKLTDFGFSCQLDPGEKLR 181

Query: 654 DTNMRGTMGYVAPEWLRNVPVTT------KVDVFSFGVMLLEIICG 693
           +  + GT  Y+APE +             +VD++S GV++  ++ G
Sbjct: 182 E--VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  107 bits (270), Expect = 6e-26
 Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 31/216 (14%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK------DIEKTNEEFMTELKIIGRTH 545
             + +G+G    V +   R K T  E A K ++K          + EE   E+ I+    
Sbjct: 9   MGEELGSGQFAIVRKC--RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66

Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEI-ALGVAR----G 600
           H N++ L      +   +L+ EL+  G L +FL  +          E  A    +    G
Sbjct: 67  HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLT------EDEATQFLKQILDG 120

Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
           + YLH +   +I H D+KP+N++L  K +    + K+ DFGI+  +       +  + GT
Sbjct: 121 VHYLHSK---RIAHFDLKPENIMLLDKNVPNPRI-KLIDFGIAHKIEAGNEFKN--IFGT 174

Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGV---MLLEIICG 693
             +VAPE +   P+  + D++S GV   +LL    G
Sbjct: 175 PEFVAPEIVNYEPLGLEADMWSIGVITYILL---SG 207

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  108 bits (273), Expect = 7e-26
 Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 29/211 (13%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR-THHKNLV 550
             + +G GS     R I   K T +E AVK     I+K+  +   E++I+ R   H N++
Sbjct: 26  VKEDIGVGSYSVCKRCIH--KATNMEFAVKI----IDKSKRDPTEEIEILLRYGQHPNII 79

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV--------EIALGVARGLL 602
            L     +     +V ELM  G L + +         +++          +   + + + 
Sbjct: 80  TLKDVYDDGKYVYVVTELMKGGELLDKI---------LRQKFFSEREASAVLFTITKTVE 130

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           YLH +    ++H D+KP N+L   ++ +   + +I DFG +K L  +     T    T  
Sbjct: 131 YLHAQ---GVVHRDLKPSNILYVDESGNPESI-RICDFGFAKQLRAENGLLMT-PCYTAN 185

Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           +VAPE L         D++S GV+L  ++ G
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  110 bits (275), Expect = 7e-26
 Identities = 49/348 (14%), Positives = 84/348 (24%), Gaps = 86/348 (24%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-------DIEKTNEEFMTELKIIGRTHH 546
            ++G              ++T     V             I++  EE +    + G  + 
Sbjct: 84  TVLGQEDPYAYLEA--TDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQ 141

Query: 547 KNLVRLLGFCSEEDK-----------------------RLLVYELM--PNGTLSNFLFHE 581
           K     L F    D                        R  +Y  M     T    L   
Sbjct: 142 KQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSH 201

Query: 582 GQRPG---WVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS 638
                      R+++ L V R L  LH      ++H  ++P +++LD           ++
Sbjct: 202 SSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLD-----QRGGVFLT 253

Query: 639 DFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR-----NVPVTTKVDVFSFGVMLLEIICG 693
            F                        A   L         +T   D ++ G+ +  I C 
Sbjct: 254 GFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA 313

Query: 694 R-----------RHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLER 742
                               +   + V       ++   L            E       
Sbjct: 314 DLPNTDDAALGGSEWIFRSCKNIPQPV----RA-LLEGFLRY--------PKE------- 353

Query: 743 FERM----AMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMPPLLHDQ 786
            +R+    AM           L  ++       E T E G PP    Q
Sbjct: 354 -DRLLPLQAMETPEYEQLRTELSAALPLYQTDGEPTREGGAPPSGTSQ 400

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  107 bits (270), Expect = 9e-26
 Identities = 40/205 (19%), Positives = 81/205 (39%), Gaps = 17/205 (8%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
            ++ +G G  G V+R +     ++     K ++            E+ I+    H+N++ 
Sbjct: 9   IAEDLGRGEFGIVHRCVE--TSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILH 65

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L       ++ ++++E +    +   +          + V     V   L +LH      
Sbjct: 66  LHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---N 122

Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           I H DI+P+N++   +    +   KI +FG ++ L          +     Y APE  ++
Sbjct: 123 IGHFDIRPENIIYQTRR---SSTIKIIEFGQARQLKPGDNFRL--LFTAPEYYAPEVHQH 177

Query: 672 VPVTTKVDVFSFGV---MLLEIICG 693
             V+T  D++S G    +LL    G
Sbjct: 178 DVVSTATDMWSLGTLVYVLL---SG 199

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  107 bits (270), Expect = 9e-26
 Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 27/214 (12%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN------EEFMTELKIIGRTH 545
             + +G+G    V +     K T +E A K ++K   + +      EE   E+ I+ +  
Sbjct: 16  IGEELGSGQFAIVKKCRE--KSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73

Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQ---RPGWVQRVEIALGVARGLL 602
           H N++ L          +L+ EL+  G L +FL  +          +       +  G+ 
Sbjct: 74  HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEE----EATSFIKQILDGVN 129

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           YLH +   +I H D+KP+N++L  K +   ++ K+ DFG++  +       +  + GT  
Sbjct: 130 YLHTK---KIAHFDLKPENIMLLDKNIPIPHI-KLIDFGLAHEIEDGVEFKN--IFGTPE 183

Query: 663 YVAPEWLRNVPVTTKVDVFSFGV---MLLEIICG 693
           +VAPE +   P+  + D++S GV   +LL    G
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILL---SG 214

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  108 bits (271), Expect = 2e-25
 Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 25/213 (11%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEF--MTELKIIGRTHHKN 548
             + +G GS GKV   I++  DT+   A+K + K    + NE      EL+I+    H  
Sbjct: 19  ILRAIGKGSFGKVC--IVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPF 76

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV---EIALGVARGLLYLH 605
           LV L     +E+   +V +L+  G L   L           ++   E+ +     L YL 
Sbjct: 77  LVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMA----LDYLQ 132

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
            +   +IIH D+KP N+L     LD +    I+DF I+ +L   +T+  T M GT  Y+A
Sbjct: 133 NQ---RIIHRDMKPDNIL-----LDEHGHVHITDFNIAAML-PRETQITT-MAGTKPYMA 182

Query: 666 PEWLRNVPV---TTKVDVFSFGVMLLEIICGRR 695
           PE   +      +  VD +S GV   E++ GRR
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  105 bits (265), Expect = 5e-25
 Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 19/206 (9%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTH-HKNLVRLL 553
           +G+G+ G+V++   R + T   IAVK++ +   ++ N+  + +L ++ ++H    +V+  
Sbjct: 33  MGSGTCGQVWKM--RFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCF 90

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
           G         +  ELM                      ++ + + + L YL E+    +I
Sbjct: 91  GTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVI 147

Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE-----W 668
           H D+KP N+L     LD     K+ DFGIS  L     +      G   Y+APE      
Sbjct: 148 HRDVKPSNIL-----LDERGQIKLCDFGISGRL--VDDKAKDRSAGCAAYMAPERIDPPD 200

Query: 669 LRNVPVTTKVDVFSFGVMLLEIICGR 694
                   + DV+S G+ L+E+  G+
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQ 226

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  105 bits (263), Expect = 8e-25
 Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 38/221 (17%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK--------DIEKTNEEFMTELKIIGR 543
            SK +G+G+ G+V       + T  ++A+K + K                  TE++I+ +
Sbjct: 14  MSKTLGSGACGEVKLAFE--RKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71

Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV--------EIAL 595
            +H  ++++  F  + +   +V ELM  G L + +         V               
Sbjct: 72  LNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKV---------VGNKRLKEATCKLYFY 121

Query: 596 GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDT 655
            +   + YLHE     IIH D+KP+NVLL  +  D     KI+DFG SK+L +       
Sbjct: 122 QMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCL--IKITDFGHSKILGETSLMRTL 176

Query: 656 NMRGTMGYVAPEWLRNV---PVTTKVDVFSFGVMLLEIICG 693
              GT  Y+APE L +V        VD +S GV+L   + G
Sbjct: 177 C--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  109 bits (273), Expect = 8e-25
 Identities = 53/299 (17%), Positives = 99/299 (33%), Gaps = 64/299 (21%)

Query: 495 LVGTGSSGKVYRGI-LRLKDTQIEIAVKKLEKDIEKTNEEFMT----ELKIIGRTHHKNL 549
            +  G  G +Y  +   +    +   +K L   +   + E       E + +    H ++
Sbjct: 87  CIAHGGLGWIYLALDRNVNGRPV--VLKGL---VHSGDAEAQAMAMAERQFLAEVVHPSI 141

Query: 550 VRLLGFCSEEDKRL-----LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYL 604
           V++  F    D+       +V E +   +L       GQ+    + +   L +   L YL
Sbjct: 142 VQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK---GQKLPVAEAIAYLLEILPALSYL 198

Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR-GTMGY 663
           H      +++ D+KP+N++L      T    K+ D G    +             GT G+
Sbjct: 199 HSI---GLVYNDLKPENIML------TEEQLKLIDLGAVSRI------NSFGYLYGTPGF 243

Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS 723
            APE +R  P T   D+++ G  L  +                                 
Sbjct: 244 QAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRN------------------------- 277

Query: 724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-SMKKVIHMLEGTLEVGMPP 781
                 V   PE    L+ ++    +      PDP  R  + +++   L G L   +  
Sbjct: 278 ---GRYVDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREVVAQ 333

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  105 bits (263), Expect = 1e-24
 Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 44/225 (19%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK--------DIEKTNEEFMTELKIIGR 543
              ++G G S  V R +   + T  E AVK +E          +E+  E    E  I+ +
Sbjct: 98  PKDVIGRGVSSVVRRCVH--RATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155

Query: 544 -THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV--------EIA 594
              H +++ L+          LV++LM  G L ++L          ++V         I 
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL---------TEKVALSEKETRSIM 206

Query: 595 LGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD 654
             +   + +LH      I+H D+KP+N+L     LD N   ++SDFG S  L   +   +
Sbjct: 207 RSLLEAVSFLHAN---NIVHRDLKPENIL-----LDDNMQIRLSDFGFSCHLEPGEKLRE 258

Query: 655 TNMRGTMGYVAPEWLRNVPVTT------KVDVFSFGVMLLEIICG 693
             + GT GY+APE L+     T      +VD+++ GV+L  ++ G
Sbjct: 259 --LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  104 bits (261), Expect = 2e-24
 Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 25/213 (11%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK------DIEKTNEEFMTELKIIGRTH 545
             + +G+G    V +   R K T ++ A K ++K          + E+   E+ I+    
Sbjct: 15  TGEELGSGQFAVVKKC--REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72

Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEI-ALGVAR----G 600
           H N++ L      +   +L+ EL+  G L +FL  +          E  A    +    G
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT------EEEATEFLKQILNG 126

Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
           + YLH     QI H D+KP+N++L  + +    + KI DFG++  ++      +  + GT
Sbjct: 127 VYYLHSL---QIAHFDLKPENIMLLDRNVPKPRI-KIIDFGLAHKIDFGNEFKN--IFGT 180

Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
             +VAPE +   P+  + D++S GV+   ++ G
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  105 bits (265), Expect = 2e-24
 Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 38/217 (17%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           K++G GS G VY+   +L D+   +A+KK+ +D    N     EL+I+ +  H N+VRL 
Sbjct: 60  KVIGNGSFGVVYQA--KLCDSGELVAIKKVLQDKRFKN----RELQIMRKLDHCNIVRLR 113

Query: 554 G-FCSEEDKRL-----LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV---ARGLLYL 604
             F S  +K+      LV + +P  T+     H  +    +  + + L +    R L Y+
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172

Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
           H      I H DIKPQN+LLD  T     + K+ DFG +K L + +            Y+
Sbjct: 173 HSF---GICHRDIKPQNLLLDPDT----AVLKLCDFGSAKQLVRGEPNVS--------YI 217

Query: 665 ------APEWLRNVPV-TTKVDVFSFGVMLLEIICGR 694
                 APE +      T+ +DV+S G +L E++ G+
Sbjct: 218 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  103 bits (258), Expect = 4e-24
 Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 19/205 (9%)

Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR-THHKNLVR 551
            K +G GS     + +   K +    AVK + K +E        E+  +     H N+V+
Sbjct: 16  DKPLGEGSFSICRKCVH--KKSNQAFAVKIISKRME---ANTQKEITALKLCEGHPNIVK 70

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGW---VQRVEIALGVARGLLYLHEEC 608
           L     ++    LV EL+  G L    F   ++       +   I   +   + ++H+  
Sbjct: 71  LHEVFHDQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMHDV- 125

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
              ++H D+KP+N+L      + N   KI DFG ++L   D     T    T+ Y APE 
Sbjct: 126 --GVVHRDLKPENLLF--TDENDNLEIKIIDFGFARLKPPDNQPLKT-PCFTLHYAAPEL 180

Query: 669 LRNVPVTTKVDVFSFGVMLLEIICG 693
           L         D++S GV+L  ++ G
Sbjct: 181 LNQNGYDESCDLWSLGVILYTMLSG 205

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  103 bits (258), Expect = 4e-24
 Identities = 46/225 (20%), Positives = 87/225 (38%), Gaps = 32/225 (14%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR-THHKNLVRL 552
           +++  G    VY    +   +  E A+K+L  + E+ N   + E+  + + + H N+V+ 
Sbjct: 34  RVLAEGGFAFVYEA--QDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF 91

Query: 553 LGFCSEEDKR--------LLVYELMPNGTLSNFLFHEGQRPGWVQRV-EIALGVARGLLY 603
               S   +         LL+ EL     +      E + P     V +I     R + +
Sbjct: 92  CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQH 151

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT---------- 653
           +H   +  IIH D+K +N+L     L      K+ DFG +  ++     +          
Sbjct: 152 MHR-QKPPIIHRDLKVENLL-----LSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVE 205

Query: 654 -DTNMRGTMGYVAPE---WLRNVPVTTKVDVFSFGVMLLEIICGR 694
            +     T  Y  PE      N P+  K D+++ G +L  +   +
Sbjct: 206 EEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQ 250

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  104 bits (261), Expect = 5e-24
 Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 39/217 (17%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           K++G GS G V++   +L ++  E+A+KK+ +D    N     EL+I+    H N+V L 
Sbjct: 46  KVIGNGSFGVVFQA--KLVESD-EVAIKKVLQDKRFKN----RELQIMRIVKHPNVVDLK 98

Query: 554 G-FCSEEDKRL-----LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV---ARGLLYL 604
             F S  DK+      LV E +P  T+     H  +    +  + I L +    R L Y+
Sbjct: 99  AFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157

Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
           H      I H DIKPQN+LLD  +     + K+ DFG +K+L   +            Y+
Sbjct: 158 HSI---GICHRDIKPQNLLLDPPS----GVLKLIDFGSAKILIAGEPNVS--------YI 202

Query: 665 ------APEWLRNVPV-TTKVDVFSFGVMLLEIICGR 694
                 APE +      TT +D++S G ++ E++ G+
Sbjct: 203 CSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  103 bits (258), Expect = 7e-24
 Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 34/218 (15%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           ++ G G+ G V  G  + K T + +A+KK+ +D    N E    ++ +   HH N+V+L 
Sbjct: 29  RMAGQGTFGTVQLG--KEKSTGMSVAIKKVIQDPRFRNRELQ-IMQDLAVLHHPNIVQLQ 85

Query: 554 ------GFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV---ARGLLY 603
                 G     D  L +V E +P+ TL     +  +R      + I + +    R +  
Sbjct: 86  SYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGC 144

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           LH      + H DIKP NVL++          K+ DFG +K L+  +            Y
Sbjct: 145 LHLPS-VNVCHRDIKPHNVLVNEADGTL----KLCDFGSAKKLSPSEPNVA--------Y 191

Query: 664 V------APEWLRNVPV-TTKVDVFSFGVMLLEIICGR 694
           +      APE +      TT VD++S G +  E++ G 
Sbjct: 192 ICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  101 bits (254), Expect = 8e-24
 Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 27/214 (12%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN---EEFMTELKIIGRTHHKNLVRL 552
           +G+G++  V          + ++A+K++  ++EK     +E + E++ + + HH N+V  
Sbjct: 23  IGSGATAVVQAAYC--APKKEKVAIKRI--NLEKCQTSMDELLKEIQAMSQCHHPNIVSY 78

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV----EIAL---GVARGLLYLH 605
                 +D+  LV +L+  G++ + + H   +      V     IA     V  GL YLH
Sbjct: 79  YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 138

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM-G-- 662
           +      IH D+K  N+LL       +   +I+DFG+S  L      T   +R T  G  
Sbjct: 139 KN---GQIHRDVKAGNILLG-----EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190

Query: 663 -YVAPEWL-RNVPVTTKVDVFSFGVMLLEIICGR 694
            ++APE + +      K D++SFG+  +E+  G 
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGA 224

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  102 bits (255), Expect = 1e-23
 Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 35/234 (14%)

Query: 479 EFTFQELQEATKGFSKL--VGTGSSGKVYRGILRLKDTQIEIAVK--KLEKDIEKTNEEF 534
           E     L++    F  +  VG G+ G+VY+G  R   T    A+K   +  D E   EE 
Sbjct: 13  EIDLSALRDPAGIFELVELVGNGTYGQVYKG--RHVKTGQLAAIKVMDVTGDEE---EEI 67

Query: 535 MTELKIIGRT-HHKNLVRLLG------FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGW 587
             E+ ++ +  HH+N+    G          +D+  LV E    G++++ +  +  +   
Sbjct: 68  KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGNT 125

Query: 588 VQRVEIAL---GVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK 644
           ++   IA     + RGL +LH+    ++IH DIK QNVL     L  N   K+ DFG+S 
Sbjct: 126 LKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVL-----LTENAEVKLVDFGVSA 177

Query: 645 LLNKDQTRTDTNMRGTMGYVAPE-----WLRNVPVTTKVDVFSFGVMLLEIICG 693
            L++   R +T   GT  ++APE        +     K D++S G+  +E+  G
Sbjct: 178 QLDRTVGRRNT-FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  101 bits (254), Expect = 1e-23
 Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 26/215 (12%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR-THHKNLVRL 552
            ++G G+  +V   I     T  E AVK +EK           E++++ +   H+N++ L
Sbjct: 19  DVLGEGAHARVQTCIN--LITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGW---VQRVEIALGVARGLLYLHEECE 609
           + F  EED+  LV+E M  G++         +      ++   +   VA  L +LH +  
Sbjct: 77  IEFFEEEDRFYLVFEKMRGGSI----LSHIHKRRHFNELEASVVVQDVASALDFLHNK-- 130

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR------GTMGY 663
             I H D+KP+N+L   +  +     KI DF +   +  +   +  +        G+  Y
Sbjct: 131 -GIAHRDLKPENILC--EHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEY 187

Query: 664 VAPEWLRNVPVTTK-----VDVFSFGVMLLEIICG 693
           +APE +              D++S GV+L  ++ G
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  102 bits (256), Expect = 3e-23
 Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 22/210 (10%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           + KL+G G+ GKV   +++ K T    A+K L+K++    +E    +TE +++  + H  
Sbjct: 152 YLKLLGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 209

Query: 549 LVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRV---EIALGVARGLLYL 604
           L  L  +  +   RL  V E    G L   L  E        R    EI       L YL
Sbjct: 210 LTALK-YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA----LDYL 264

Query: 605 HEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
           H E    +++ D+K +N++LD      +   KI+DFG+ K   KD     T   GT  Y+
Sbjct: 265 HSEKN--VVYRDLKLENLMLD-----KDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYL 316

Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           APE L +      VD +  GV++ E++CGR
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  101 bits (253), Expect = 4e-23
 Identities = 38/211 (18%), Positives = 71/211 (33%), Gaps = 25/211 (11%)

Query: 497 GTGSSGKVYRGILRLKDTQIEIAVKK--LEKDIEKTNEEFMTELKIIGRTHHKNLVRLLG 554
           G      V     R K T   + V++  LE    +       EL +    +H N+V    
Sbjct: 36  GFEDLMTVNLA--RYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRA 93

Query: 555 FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLHEECETQ 611
               +++  +V   M  G+  + +         +  + IA    GV + L Y+H      
Sbjct: 94  TFIADNELWVVTSFMAYGSAKDLI--CTHFMDGMNELAIAYILQGVLKALDYIHHM---G 148

Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV------A 665
            +H  +K  ++L     +  +    +S    +  +     R           V      +
Sbjct: 149 YVHRSVKASHIL-----ISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLS 203

Query: 666 PEWLR--NVPVTTKVDVFSFGVMLLEIICGR 694
           PE L+        K D++S G+   E+  G 
Sbjct: 204 PEVLQQNLQGYDAKSDIYSVGITACELANGH 234

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  100 bits (252), Expect = 4e-23
 Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 24/209 (11%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEE--FMTELKIIGRTHHKN 548
             K +GTGS G+V   +++ K++    A+K L+K  + K  +    + E +I+   +   
Sbjct: 45  RIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR---VEIALGVARGLLYLH 605
           LV+L     +     +V E +  G + + L   G+      R    +I L       YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLH 158

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                 +I+ D+KP+N+L+D       Y+ +++DFG +K   + + RT T + GT   +A
Sbjct: 159 SL---DLIYRDLKPENLLID----QQGYI-QVTDFGFAK---RVKGRTWT-LCGTPEALA 206

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           PE + +      VD ++ GV++ E+  G 
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGY 235

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 99.5 bits (249), Expect = 6e-23
 Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 24/209 (11%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEE--FMTELKIIGRTHHKN 548
             + +GTGS G+V+  ++R +      A+K L+K+ + +  +      E  ++    H  
Sbjct: 10  ILRTLGTGSFGRVH--LIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV---EIALGVARGLLYLH 605
           ++R+ G   +  +  ++ + +  G L + L    + P  V +    E+ L     L YLH
Sbjct: 68  IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA----LEYLH 123

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
            +    II+ D+KP+N+LLD       ++ KI+DFG +K        T T + GT  Y+A
Sbjct: 124 SK---DIIYRDLKPENILLD----KNGHI-KITDFGFAK---YVPDVTYT-LCGTPDYIA 171

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           PE +   P    +D +SFG+++ E++ G 
Sbjct: 172 PEVVSTKPYNKSIDWWSFGILIYEMLAGY 200

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 99.6 bits (249), Expect = 8e-23
 Identities = 65/212 (30%), Positives = 97/212 (45%), Gaps = 27/212 (12%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKN 548
           + KL+G G+ GKV   ++R K T    A+K L K++    +E    +TE +++  T H  
Sbjct: 9   YLKLLGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66

Query: 549 LVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRV-----EIALGVARGLL 602
           L  L  +  +   RL  V E    G L   L  E       +R      EI       L 
Sbjct: 67  LTALK-YAFQTHDRLCFVMEYANGGELFFHLSRERVFT--EERARFYGAEIVSA----LE 119

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           YLH      +++ DIK +N++LD      +   KI+DFG+ K    D     T   GT  
Sbjct: 120 YLHSR---DVVYRDIKLENLMLD-----KDGHIKITDFGLCKEGISDGATMKT-FCGTPE 170

Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           Y+APE L +      VD +  GV++ E++CGR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 99.8 bits (249), Expect = 9e-23
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 28/207 (13%)

Query: 496 VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGRTHHKNLVRL 552
           +G GS G VY    R       +A+KK+    +++NE++   + E++ + +  H N ++ 
Sbjct: 62  IGHGSFGAVYFA--RDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIAL---GVARGLLYLHEECE 609
            G    E    LV E            H+      +Q VEIA    G  +GL YLH    
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVHKKP----LQEVEIAAVTHGALQGLAYLHSH-- 173

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE-- 667
             +IH D+K  N+L     L    + K+ DFG + ++    +       GT  ++APE  
Sbjct: 174 -NMIHRDVKAGNIL-----LSEPGLVKLGDFGSASIMAPANS-----FVGTPYWMAPEVI 222

Query: 668 -WLRNVPVTTKVDVFSFGVMLLEIICG 693
             +       KVDV+S G+  +E+   
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAER 249

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 97.8 bits (244), Expect = 3e-22
 Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 27/210 (12%)

Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
            +++G G +GKV       + T  + A+K L     K  +E     +  G     ++V +
Sbjct: 34  KQVLGLGVNGKVLECFH--RRTGQKCALKLLYD-SPKARQEVDHHWQASG---GPHIVCI 87

Query: 553 LGFCSEEDKR----LLVYELMPNGTLSNFLFHEGQRPGWVQRVE-----IALGVARGLLY 603
           L             L++ E M  G L    F   Q  G     E     I   +   + +
Sbjct: 88  LDVYENMHHGKRCLLIIMECMEGGEL----FSRIQERGDQAFTEREAAEIMRDIGTAIQF 143

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           LH      I H D+KP+N+L   K  + + + K++DFG +K   ++  +T      T  Y
Sbjct: 144 LHSH---NIAHRDVKPENLLYTSK--EKDAVLKLTDFGFAKETTQNALQT---PCYTPYY 195

Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           VAPE L         D++S GV++  ++CG
Sbjct: 196 VAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 96.9 bits (241), Expect = 6e-22
 Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 48/262 (18%)

Query: 524 EKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQ 583
                   +    +++ +     KN V  L   S +    +  +L     L +++    +
Sbjct: 98  PLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWM--NRR 155

Query: 584 RPGWVQRVEIALGVAR----GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD 639
                +   + L +       + +LH +    ++H D+KP N+         + + K+ D
Sbjct: 156 CSLEDREHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFT-----MDDVVKVGD 207

Query: 640 FGISKLLNKDQTRTDTNMR-----------GTMGYVAPEWLRNVPVTTKVDVFSFGVMLL 688
           FG+   +++D+                   GT  Y++PE +     + KVD+FS G++L 
Sbjct: 208 FGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILF 267

Query: 689 EIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAM 748
           E++                E   +++D  +     RNL+      P + +   ++ +  M
Sbjct: 268 ELLYS---------FSTQMERVRIITD--V-----RNLKF-----PLLFTQ--KYPQEHM 304

Query: 749 VGLWCNHPDPNLRPSMKKVIHM 770
           +      P P  RP    +I  
Sbjct: 305 MVQDMLSPSPTERPEATDIIEN 326

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 97.9 bits (244), Expect = 7e-22
 Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 26/211 (12%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
            S+++G G +GKV +     K TQ + A+K L+    K   E     +        ++VR
Sbjct: 66  TSQVLGLGINGKVLQIFN--KRTQEKFALKMLQD-CPKARREVELHWRASQ---CPHIVR 119

Query: 552 LLGFC----SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVE-----IALGVARGLL 602
           ++       +     L+V E +  G L    F   Q  G     E     I   +   + 
Sbjct: 120 IVDVYENLYAGRKCLLIVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIGEAIQ 175

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           YLH      I H D+KP+N+L   K  +     K++DFG +K      + T      T  
Sbjct: 176 YLHSI---NIAHRDVKPENLLYTSKRPNAIL--KLTDFGFAKETTSHNSLTT--PCYTPY 228

Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           YVAPE L         D++S GV++  ++CG
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 96.1 bits (240), Expect = 9e-22
 Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 29/214 (13%)

Query: 492 FSKLVGTGSSGKVY--RGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHK 547
             K++G GS GKV+  + I    D +   A+K L+K     +       E  I+   +H 
Sbjct: 28  LLKVLGQGSFGKVFLVKKI-SGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHP 86

Query: 548 NLVRLLGFCS--EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV-----EIALGVARG 600
            +V+L    +   E K  L+ + +  G L   L  E       + V     E+AL     
Sbjct: 87  FIVKL--HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT--EEDVKFYLAELALA---- 138

Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
           L +LH      II+ D+KP+N+LLD          K++DFG+SK     + +  +   GT
Sbjct: 139 LDHLHSL---GIIYRDLKPENILLD-----EEGHIKLTDFGLSKESIDHEKKAYS-FCGT 189

Query: 661 MGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           + Y+APE +     T   D +SFGV++ E++ G 
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGT 223

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 93.4 bits (233), Expect = 4e-21
 Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 24/209 (11%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRL 552
           + +G G+ G+V       + T+  +AVK ++        E    E+ I    +H+N+V+ 
Sbjct: 13  QTLGEGAYGEVQLA--VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV---EIALGVARGLLYLHEECE 609
            G   E + + L  E    G L + +  +   P    +    ++  GV     YLH    
Sbjct: 71  YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGI-- 124

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR---GTMGYVAP 666
             I H DIKP+N+L     LD     KISDFG++ +        +  +    GT+ YVAP
Sbjct: 125 -GITHRDIKPENLL-----LDERDNLKISDFGLATVF--RYNNRERLLNKMCGTLPYVAP 176

Query: 667 EWLRNVPVT-TKVDVFSFGVMLLEIICGR 694
           E L+        VDV+S G++L  ++ G 
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 93.9 bits (234), Expect = 4e-21
 Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 41/221 (18%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTE-----------LKIIG 542
            L+G G  G V+ G       ++++A+K + +   +                   L  +G
Sbjct: 37  PLLGKGGFGTVFAG--HRLTDRLQVAIKVIPR--NRVLGWSPLSDSVTCPLEVALLWKVG 92

Query: 543 RTH-HKNLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQ------RPGWVQRVEIA 594
               H  ++RLL +   ++  +LV E  +P   L +++  +G       R  + Q     
Sbjct: 93  AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQ----- 147

Query: 595 LGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD 654
             V   + + H      ++H DIK +N+L+DL+        K+ DFG   LL  D+  TD
Sbjct: 148 --VVAAIQHCHSRG---VVHRDIKDENILIDLRRGCA----KLIDFGSGALL-HDEPYTD 197

Query: 655 TNMRGTMGYVAPEWLRNVPVT-TKVDVFSFGVMLLEIICGR 694
            +  GT  Y  PEW+           V+S G++L +++CG 
Sbjct: 198 FD--GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD 236

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 95.2 bits (237), Expect = 5e-21
 Identities = 62/271 (22%), Positives = 106/271 (39%), Gaps = 39/271 (14%)

Query: 444 ALLSGVAAIYYSPAARGLIKRRNYFDPNSMEINFREFTFQELQEATKG-----FSKLVGT 498
            LL  +  ++    A  L + +   D     + + E     L+E           K++G 
Sbjct: 16  PLLDLLLGVHQELGASELAQDKYVAD----FLQWAEPIVVRLKEVRLQRDDFEILKVIGR 71

Query: 499 GSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEE--FMTELKIIGRTHHKNLVRLLGF 555
           G+  +V   ++++K T    A+K + K  + K  E   F  E  ++     + + +L  F
Sbjct: 72  GAFSEVA--VVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLH-F 128

Query: 556 CSEEDKRL-LVYELMPNGTLSNFLFHEGQR--PGWVQ--RVEIALGVARGLLYLHEECET 610
             +++  L LV E    G L   L   G+R      +    EI +     +  +H     
Sbjct: 129 AFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMA----IDSVHRL--- 181

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
             +H DIKP N+LLD          +++DFG    L  D T       GT  Y++PE L+
Sbjct: 182 GYVHRDIKPDNILLD-----RCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQ 236

Query: 671 NVPVTTK-------VDVFSFGVMLLEIICGR 694
            V             D ++ GV   E+  G+
Sbjct: 237 AVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 97.0 bits (241), Expect = 5e-21
 Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 24/211 (11%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGR-THHK 547
           F  ++G GS GKV   +   K T    AVK L+KD+   +++    M E +++       
Sbjct: 345 FLMVLGKGSFGKVM--LSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402

Query: 548 NLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRV---EIALGVARGLLY 603
            L +L   C +   RL  V E +  G L   +   G+           EIA+G    L +
Sbjct: 403 FLTQLH-SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG----LFF 457

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           L  +    II+ D+K  NV+LD     +    KI+DFG+ K    D   T T   GT  Y
Sbjct: 458 LQSK---GIIYRDLKLDNVMLD-----SEGHIKIADFGMCKENIWDGVTTKT-FCGTPDY 508

Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           +APE +   P    VD ++FGV+L E++ G+
Sbjct: 509 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 95.6 bits (238), Expect = 6e-21
 Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 34/217 (15%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEE--FMTELKIIGRTHHKNLV 550
           K++G G+ G+V   +++LK+     A+K L K  + K  E   F  E  ++     K + 
Sbjct: 80  KVIGRGAFGEVA--VVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWIT 137

Query: 551 RLLGFCSEEDKRL-LVYELMPNGTLSNFLFH----EGQRPGWVQRV---EIALGVARGLL 602
            L  +  ++D  L LV +    G L   L      E + P  + R    E+ +     + 
Sbjct: 138 TLH-YAFQDDNNLYLVMDYYVGGDL---LTLLSKFEDRLPEEMARFYLAEMVIA----ID 189

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
            +H+      +H DIKP N+L+D      N   +++DFG    L +D T   +   GT  
Sbjct: 190 SVHQL---HYVHRDIKPDNILMD-----MNGHIRLADFGSCLKLMEDGTVQSSVAVGTPD 241

Query: 663 YVAPEWLRNVPVTTK-----VDVFSFGVMLLEIICGR 694
           Y++PE L+ +           D +S GV + E++ G 
Sbjct: 242 YISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 93.6 bits (233), Expect = 7e-21
 Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 45/222 (20%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMT-----ELKIIGRTHHK 547
            L+G+G  G VY G        + +A+K +EKD I    E         E+ ++ +    
Sbjct: 49  PLLGSGGFGSVYSG--IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 106

Query: 548 --NLVRLLGFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEIALGVAR----- 599
              ++RLL +    D  +L+ E   P   L +F+          +R  +   +AR     
Sbjct: 107 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQ 157

Query: 600 ---GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN 656
               + + H      ++H DIK +N+L+DL   +     K+ DFG   LL       DT 
Sbjct: 158 VLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL----KLIDFGSGALL------KDTV 204

Query: 657 MR---GTMGYVAPEWLRNVPVT-TKVDVFSFGVMLLEIICGR 694
                GT  Y  PEW+R          V+S G++L +++CG 
Sbjct: 205 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 246

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 93.8 bits (234), Expect = 8e-21
 Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 32/215 (14%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGR-THHK 547
             +++G GS  KV   ++RLK T    A+K ++K++   +E+     TE  +  + ++H 
Sbjct: 13  LLRVIGRGSYAKVL--LVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70

Query: 548 NLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGW--VQRV-----EIALGVAR 599
            LV L   C + + RL  V E +  G L        QR      +       EI+L    
Sbjct: 71  FLVGLH-SCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLA--- 122

Query: 600 GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG 659
            L YLHE     II+ D+K  NVLLD     +    K++D+G+ K   +    T T   G
Sbjct: 123 -LNYLHER---GIIYRDLKLDNVLLD-----SEGHIKLTDYGMCKEGLRPGDTTST-FCG 172

Query: 660 TMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           T  Y+APE LR       VD ++ GV++ E++ GR
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 94.7 bits (236), Expect = 8e-21
 Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 43/267 (16%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGR-THHK 547
             +++G GS  KV   ++RLK T    A++ ++K++   +E+     TE  +  + ++H 
Sbjct: 56  LLRVIGRGSYAKVL--LVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113

Query: 548 NLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGW--VQRV-----EIALGVAR 599
            LV L   C + + RL  V E +  G L        QR      +       EI+L    
Sbjct: 114 FLVGLH-SCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLA--- 165

Query: 600 GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG 659
            L YLHE     II+ D+K  NVLLD     +    K++D+G+ K   +    T T   G
Sbjct: 166 -LNYLHER---GIIYRDLKLDNVLLD-----SEGHIKLTDYGMCKEGLRPGDTTST-FCG 215

Query: 660 TMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR----RHIELSRVEEESEEV---DIV 712
           T  Y+APE LR       VD ++ GV++ E++ GR            ++ +E+     I+
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 275

Query: 713 LSDWVISCMLSRN----LQVLVSHDPE 735
                I   LS      L+  ++ DP+
Sbjct: 276 EKQIRIPRSLSVKAASVLKSFLNKDPK 302

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 93.0 bits (232), Expect = 1e-20
 Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 31/216 (14%)

Query: 492 FSKLVGTGSSGKVY--RGILRLKDTQIEIAVKKLEKD--IEKTNEEF--MTELKIIGRTH 545
             +++G G  GKV+  R +    +T    A+K L+K   +    +      E  I+    
Sbjct: 21  LLRVLGKGGYGKVFQVRKV-TGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK 79

Query: 546 HKNLVRLLGFCS--EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV-----EIALGVA 598
           H  +V L    +     K  L+ E +  G L   L  EG              EI++   
Sbjct: 80  HPFIVDL--IYAFQTGGKLYLILEYLSGGELFMQLEREGIFM--EDTACFYLAEISMA-- 133

Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR 658
             L +LH++    II+ D+KP+N++L+          K++DFG+ K    D T T T   
Sbjct: 134 --LGHLHQK---GIIYRDLKPENIMLN-----HQGHVKLTDFGLCKESIHDGTVTHT-FC 182

Query: 659 GTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           GT+ Y+APE L        VD +S G ++ +++ G 
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA 218

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 94.0 bits (234), Expect = 1e-20
 Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 37/217 (17%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK-DIEKTNEE--FMTELKIIGRTHHKNLV 550
           K++G G+ G+V   ++R K T+   A+K L K ++ K ++   F  E  I+   +   +V
Sbjct: 75  KVIGRGAFGEVQ--LVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVV 132

Query: 551 RLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVAR--------GL 601
           +L  +  ++D+ L +V E MP G L     +       +   ++    AR         L
Sbjct: 133 QLF-YAFQDDRYLYMVMEYMPGGDL----VN------LMSNYDVPEKWARFYTAEVVLAL 181

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
             +H       IH D+KP N+LLD      +   K++DFG    +NK+         GT 
Sbjct: 182 DAIHS---MGFIHRDVKPDNMLLD-----KSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 233

Query: 662 GYVAPEWLRNVPVTTK----VDVFSFGVMLLEIICGR 694
            Y++PE L++           D +S GV L E++ G 
Sbjct: 234 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 270

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 92.7 bits (231), Expect = 2e-20
 Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 28/213 (13%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGR-THHK 547
           F  ++G GS GKV   +   K T    AVK L+KD+   +++    M E +++       
Sbjct: 24  FLMVLGKGSFGKVM--LSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81

Query: 548 NLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRV-----EIALGVARGL 601
            L +L   C +   RL  V E +  G L   +   G+             EIA+G    L
Sbjct: 82  FLTQLH-SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFK--EPHAVFYAAEIAIG----L 134

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            +L  +    II+ D+K  NV+LD     +    KI+DFG+ K    D   T T   GT 
Sbjct: 135 FFLQSK---GIIYRDLKLDNVMLD-----SEGHIKIADFGMCKENIWDGVTTKT-FCGTP 185

Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
            Y+APE +   P    VD ++FGV+L E++ G+
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 92.0 bits (229), Expect = 2e-20
 Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 24/209 (11%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRL 552
           + +G G+ G+V       + T+  +AVK ++        E    E+ I    +H+N+V+ 
Sbjct: 13  QTLGEGAYGEVQLA--VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV---EIALGVARGLLYLHEECE 609
            G   E + + L  E    G L + +  +   P    +    ++  GV     YLH    
Sbjct: 71  YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGI-- 124

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR---GTMGYVAP 666
             I H DIKP+N+L     LD     KISDFG++ +        +  +    GT+ YVAP
Sbjct: 125 -GITHRDIKPENLL-----LDERDNLKISDFGLATVF--RYNNRERLLNKMCGTLPYVAP 176

Query: 667 EWLRNVPVT-TKVDVFSFGVMLLEIICGR 694
           E L+        VDV+S G++L  ++ G 
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 91.6 bits (228), Expect = 3e-20
 Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 24/208 (11%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEE-FMTELKIIGRTHHKNLVR 551
           K +G G+  KV      L  T  E+A+K ++K  +  T+ +    E++I+   +H N+V+
Sbjct: 21  KTIGKGNFAKVKLARHIL--TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVK 78

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV---EIALGVARGLLYLHEEC 608
           L      E    L+ E    G + ++L   G+      R    +I   V     Y H++ 
Sbjct: 79  LFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ----YCHQKR 134

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPE 667
              I+H D+K +N+L     LD +   KI+DFG S                G   Y APE
Sbjct: 135 ---IVHRDLKAENLL-----LDADMNIKIADFGFSNEFTVGGKLDAFC---GAPPYAAPE 183

Query: 668 WLRNVPVT-TKVDVFSFGVMLLEIICGR 694
             +       +VDV+S GV+L  ++ G 
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGS 211

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 90.8 bits (226), Expect = 4e-20
 Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 35/218 (16%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD----IEKTNEEFMTELKIIGRTHHKNL 549
            L+G GS GKV        +T    AVK L+K     I         E++++ R  HKN+
Sbjct: 11  DLLGEGSYGKVKEV--LDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68

Query: 550 VRLLGFCSEEDKR--LLVYELMPNGTLSNFLFH---EGQRPGWVQR---VEIALGVARGL 601
           ++L+     E+K+   +V E    G     +     E + P         ++  G+    
Sbjct: 69  IQLVDVLYNEEKQKMYMVMEYCVCGMQE--MLDSVPEKRFPVCQAHGYFCQLIDGLE--- 123

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR--- 658
            YLH +    I+H DIKP N+L     L T    KIS  G+++ L       D   R   
Sbjct: 124 -YLHSQG---IVHKDIKPGNLL-----LTTGGTLKISALGVAEAL--HPFAADDTCRTSQ 172

Query: 659 GTMGYVAPEWLRNVPV--TTKVDVFSFGVMLLEIICGR 694
           G+  +  PE    +      KVD++S GV L  I  G 
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGL 210

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 91.5 bits (228), Expect = 4e-20
 Identities = 67/213 (31%), Positives = 104/213 (48%), Gaps = 28/213 (13%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGR-THHK 547
           F +++G GS GKV   + R+K+T    AVK L+KD+   +++    MTE +I+    +H 
Sbjct: 27  FIRVLGKGSFGKVM--LARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84

Query: 548 NLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRV-----EIALGVARGL 601
            L +L   C +   RL  V E +  G L   +    +      R      EI       L
Sbjct: 85  FLTQLF-CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD--EARARFYAAEIISA----L 137

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
           ++LH++    II+ D+K  NVLLD          K++DFG+ K    +   T T   GT 
Sbjct: 138 MFLHDK---GIIYRDLKLDNVLLD-----HEGHCKLADFGMCKEGICNGVTTAT-FCGTP 188

Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
            Y+APE L+ +     VD ++ GV+L E++CG 
Sbjct: 189 DYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGH 221

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 91.6 bits (228), Expect = 6e-20
 Identities = 69/222 (31%), Positives = 99/222 (44%), Gaps = 46/222 (20%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEF--MTELKIIGR-THHK 547
           F K++G GS GKV   + R K  ++  AVK L+K  I K  EE   M+E  ++ +   H 
Sbjct: 42  FLKVIGKGSFGKVL--LARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99

Query: 548 NLVRLLGFCS--EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV-------------E 592
            LV L    S    DK   V + +  G L    +H       +QR              E
Sbjct: 100 FLVGL--HFSFQTADKLYFVLDYINGGEL---FYH-------LQRERCFLEPRARFYAAE 147

Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           IA      L YLH      I++ D+KP+N+LLD     +     ++DFG+ K   +  + 
Sbjct: 148 IASA----LGYLHSL---NIVYRDLKPENILLD-----SQGHIVLTDFGLCKENIEHNST 195

Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           T T   GT  Y+APE L   P    VD +  G +L E++ G 
Sbjct: 196 TST-FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 236

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 91.1 bits (227), Expect = 6e-20
 Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 28/213 (13%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF---MTELKIIGR-THHK 547
             K++G GS GKV+  +   K T    A+K L+KD+   +++    M E +++     H 
Sbjct: 21  LHKMLGKGSFGKVF--LAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78

Query: 548 NLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRV-----EIALGVARGL 601
            L  +     +  + L  V E +  G L   +    +    + R      EI LG    L
Sbjct: 79  FLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFD--LSRATFYAAEIILG----L 131

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            +LH +    I++ D+K  N+LLD      +   KI+DFG+ K       +T+T   GT 
Sbjct: 132 QFLHSK---GIVYRDLKLDNILLD-----KDGHIKIADFGMCKENMLGDAKTNT-FCGTP 182

Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
            Y+APE L        VD +SFGV+L E++ G+
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 90.9 bits (226), Expect = 1e-19
 Identities = 55/249 (22%), Positives = 94/249 (37%), Gaps = 70/249 (28%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           K +GTGS G V        ++    A+KK+ +D    N E    L I+    H N+++L+
Sbjct: 13  KTLGTGSFGIVCEV--FDIESGKRFALKKVLQDPRYKNRE----LDIMKVLDHVNIIKLV 66

Query: 554 -GFCSEEDKRL-------------------------------------LVYELMPNGTLS 575
             F +  D+                                       ++ E +P+ TL 
Sbjct: 67  DYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLH 125

Query: 576 NFLFHEGQRPGWVQRVEIALGV---ARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTN 632
             L    +    +    I++ +    R + ++H      I H DIKPQN+L++ K     
Sbjct: 126 KVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS---LGICHRDIKPQNLLVNSKDNT-- 180

Query: 633 YMAKISDFGISKLLNKDQTRTDTNMRGTMGYV------APEWLRNVPV-TTKVDVFSFGV 685
              K+ DFG +K L   +            Y+      APE +      T  +D++S G 
Sbjct: 181 --LKLCDFGSAKKLIPSEPSVA--------YICSRFYRAPELMLGATEYTPSIDLWSIGC 230

Query: 686 MLLEIICGR 694
           +  E+I G+
Sbjct: 231 VFGELILGK 239

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 88.2 bits (219), Expect = 5e-19
 Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 33/216 (15%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT----------ELKIIGR 543
             +G+G+ G V+      K+   E+ VK ++K  EK  E+             E+ I+ R
Sbjct: 30  SPLGSGAFGFVWTA--VDKEKNKEVVVKFIKK--EKVLEDCWIEDPKLGKVTLEIAILSR 85

Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGT-LSNFLFHEGQRPGWVQRV---EIALGVAR 599
             H N++++L     +    LV E   +G  L  F+    +    +      ++   V  
Sbjct: 86  VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVG- 144

Query: 600 GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRG 659
              YL  +    IIH DIK +N++     +  ++  K+ DFG +  L + +    T   G
Sbjct: 145 ---YLRLKD---IIHRDIKDENIV-----IAEDFTIKLIDFGSAAYLERGK-LFYTFC-G 191

Query: 660 TMGYVAPEWLRNVPVT-TKVDVFSFGVMLLEIICGR 694
           T+ Y APE L   P    +++++S GV L  ++   
Sbjct: 192 TIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEE 227

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 86.5 bits (215), Expect = 8e-19
 Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 25/209 (11%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTN--EEFMTELKIIGRTHHKNLV 550
             +G G+ GKV  G    + T  ++AVK L +  I   +   +   E++ +    H +++
Sbjct: 17  DTLGVGTFGKVKIG--EHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII 74

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV---EIALGVARGLLYLHEE 607
           +L    S      +V E +  G L +++   G+      R    +I   V     Y H  
Sbjct: 75  KLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD----YCHRH 130

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAP 666
               ++H D+KP+NVL     LD +  AKI+DFG+S +++  +  RT     G+  Y AP
Sbjct: 131 M---VVHRDLKPENVL-----LDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAP 179

Query: 667 EWLRNVPVT-TKVDVFSFGVMLLEIICGR 694
           E +        +VD++S GV+L  ++CG 
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALLCGT 208

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 84.0 bits (208), Expect = 7e-18
 Identities = 26/206 (12%), Positives = 54/206 (26%), Gaps = 48/206 (23%)

Query: 495 LVGTGSSGKVYRGILRLKDTQI--EIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNL 549
             G     + ++      DT +  ++A+  ++      +   +E ++    + R     +
Sbjct: 38  FHGGVPPLQFWQA----LDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGV 93

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
            R+L         L+V E +  G+L          P  V  +     +A      H    
Sbjct: 94  ARVLDVVHTRAGGLVVAEWIRGGSLQEVA---DTSPSPVGAIRAMQSLAAAADAAHRA-- 148

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL 669
             +      P  V              +S  G   L                  +     
Sbjct: 149 -GVALSIDHPSRVR-------------VSIDGDVVL-------------AYPATMP---- 177

Query: 670 RNVPVTTKVDVFSFGVMLLEIICGRR 695
                  + D+   G  L  ++  R 
Sbjct: 178 ---DANPQDDIRGIGASLYALLVNRW 200

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 84.3 bits (209), Expect = 1e-17
 Identities = 56/206 (27%), Positives = 82/206 (39%), Gaps = 21/206 (10%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           K +G+G+ G       R K T+  +AVK +E+     +E    E+       H N+VR  
Sbjct: 26  KDIGSGNFGVARLM--RDKLTKELVAVKYIERG-AAIDENVQREIINHRSLRHPNIVRFK 82

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV---EIALGVARGLLYLHEECET 610
                     ++ E    G L   + + G+      R    ++  GV+    Y H     
Sbjct: 83  EVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVS----YCHSM--- 135

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWL 669
           QI H D+K +N LLD          KI DFG SK        ++     GT  Y+APE L
Sbjct: 136 QICHRDLKLENTLLDGSPAPR---LKICDFGYSKSSVLHSQPKSTV---GTPAYIAPEVL 189

Query: 670 RNVPVT-TKVDVFSFGVMLLEIICGR 694
                     DV+S GV L  ++ G 
Sbjct: 190 LRQEYDGKIADVWSCGVTLYVMLVGA 215

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 85.2 bits (211), Expect = 2e-17
 Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 25/209 (11%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTN--EEFMTELKIIGRTHHKNLV 550
             +G G+ GKV  G   L  T  ++AVK L +  I   +   +   E++ +    H +++
Sbjct: 22  DTLGVGTFGKVKVGKHEL--TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHII 79

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV---EIALGVARGLLYLHEE 607
           +L    S      +V E +  G L +++   G+      R    +I  GV     Y H  
Sbjct: 80  KLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVD----YCHRH 135

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAP 666
               ++H D+KP+NVL     LD +  AKI+DFG+S +++  +  RT     G+  Y AP
Sbjct: 136 M---VVHRDLKPENVL-----LDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAP 184

Query: 667 EWLRNVPVT-TKVDVFSFGVMLLEIICGR 694
           E +        +VD++S GV+L  ++CG 
Sbjct: 185 EVISGRLYAGPEVDIWSSGVILYALLCGT 213

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 83.9 bits (208), Expect = 2e-17
 Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 31/218 (14%)

Query: 492 FSKLVGTGSSGKVY--RGILRLKDTQIEIAVKKLEKD--IEKTN--EEFMTELKIIGRT- 544
             K++GTG+ GKV+  R I    DT    A+K L+K   ++K    E   TE +++    
Sbjct: 58  LLKVLGTGAYGKVFLVRKI-SGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR 116

Query: 545 HHKNLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRV-----EIALGVA 598
               LV L  +  + + +L L+ + +  G L   L    +       V     EI L   
Sbjct: 117 QSPFLVTLH-YAFQTETKLHLILDYINGGELFTHLSQRERFT--EHEVQIYVGEIVLA-- 171

Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR 658
             L +LH+     II+ DIK +N+LLD     +N    ++DFG+SK    D+T    +  
Sbjct: 172 --LEHLHKL---GIIYRDIKLENILLD-----SNGHVVLTDFGLSKEFVADETERAYDFC 221

Query: 659 GTMGYVAPEWLRNVPV--TTKVDVFSFGVMLLEIICGR 694
           GT+ Y+AP+ +R         VD +S GV++ E++ G 
Sbjct: 222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA 259

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 82.7 bits (205), Expect = 2e-17
 Identities = 55/236 (23%), Positives = 89/236 (37%), Gaps = 52/236 (22%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMT---------------- 536
             +G GS G V       ++     A+K L K  + +                       
Sbjct: 19  DEIGKGSYGVVKLA--YNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQP 76

Query: 537 ---------ELKIIGRTHHKNLVRLLG--FCSEEDKRLLVYELMPNGTLSNFLFH----E 581
                    E+ I+ +  H N+V+L+       ED   +V+EL+  G +          E
Sbjct: 77  RGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSE 136

Query: 582 GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG 641
            Q   + Q  ++  G+     YLH +   +IIH DIKP N+L     +  +   KI+DFG
Sbjct: 137 DQARFYFQ--DLIKGIE----YLHYQ---KIIHRDIKPSNLL-----VGEDGHIKIADFG 182

Query: 642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT---TKVDVFSFGVMLLEIICGR 694
           +S               GT  ++APE L           +DV++ GV L   + G+
Sbjct: 183 VSNEFKGSDALLSNT-VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 83.0 bits (206), Expect = 2e-17
 Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 21/210 (10%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHK 547
           + K+  +G GS G V++   R +DT   +A+KK  +  +    + +   E++++ +  H 
Sbjct: 5   YEKIGKIGEGSYGVVFKC--RNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFL--FHEGQRPGWVQRVEIALGVARGLLYLH 605
           NLV LL     + +  LV+E   + T+ + L  +  G     V+   I     + + + H
Sbjct: 63  NLVNLLEVFRRKRRLHLVFEYCDH-TVLHELDRYQRGVPEHLVKS--ITWQTLQAVNFCH 119

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
           +      IH D+KP+N+L     +  + + K+ DFG ++LL    +    +   T  Y +
Sbjct: 120 KH---NCIHRDVKPENIL-----ITKHSVIKLCDFGFARLLT-GPSDYYDDEVATRWYRS 170

Query: 666 PEWLRNVPV-TTKVDVFSFGVMLLEIICGR 694
           PE L         VDV++ G +  E++ G 
Sbjct: 171 PELLVGDTQYGPPVDVWAIGCVFAELLSGV 200

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 82.7 bits (205), Expect = 4e-17
 Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 30/239 (12%)

Query: 463 KRRNYFDPNSMEINFREF-TFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVK 521
              +  D  +  + F+    ++ L         LVG GS G V +   R KDT   +A+K
Sbjct: 7   HHSSGVDLGTENLYFQSMEKYENL--------GLVGEGSYGMVMKC--RNKDTGRIVAIK 56

Query: 522 KLEKDIEKTNEEFMT--ELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL- 578
           K  +  +    + +   E+K++ +  H+NLV LL  C ++ +  LV+E + + T+ + L 
Sbjct: 57  KFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH-TILDDLE 115

Query: 579 -FHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLK-TLDTNYMAK 636
            F  G     VQ+      +  G+ + H      IIH DIKP+N+L+     +      K
Sbjct: 116 LFPNGLDYQVVQK--YLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVV------K 164

Query: 637 ISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL-RNVPVTTKVDVFSFGVMLLEIICGR 694
           + DFG ++ L         +   T  Y APE L  +V     VDV++ G ++ E+  G 
Sbjct: 165 LCDFGFARTLA-APGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 82.9 bits (205), Expect = 5e-17
 Identities = 51/240 (21%), Positives = 100/240 (41%), Gaps = 27/240 (11%)

Query: 473 MEINFREFTFQELQEATKGFSKL---VGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IE 528
           M+ +F+     E +     F      VG G+ G VY+   +      + A+K++E   I 
Sbjct: 3   MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS 62

Query: 529 KTNEEFMTELKIIGRTHHKNLVRLLG-FCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPG 586
            +    +  L+ +    H N++ L   F S  D+++ L+++   +  L + +        
Sbjct: 63  MSACREIALLREL---KHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKA 118

Query: 587 WVQRVEIALGVA--------RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS 638
             + V++  G+          G+ YLH      ++H D+KP N+L+           KI+
Sbjct: 119 NKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVM-GEGPERGRVKIA 174

Query: 639 DFGISKLLNKDQTRTDTNMRG---TMGYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICGR 694
           D G ++L N    +   ++     T  Y APE L      T  +D+++ G +  E++   
Sbjct: 175 DMGFARLFNSP-LKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 82.4 bits (204), Expect = 6e-17
 Identities = 50/224 (22%), Positives = 92/224 (41%), Gaps = 39/224 (17%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKII-----------G 542
           + +G G    V+    +       +A+K + +  +   E    E+K++            
Sbjct: 25  RKLGWGHFSTVWLA--KDMVNNTHVAMKIV-RGDKVYTEAAEDEIKLLQRVNDADNTKED 81

Query: 543 RTHHKNLVRLLG---FCSEEDKRL-LVYELM-PNGTLSNFLFHEGQRPGWVQRV-EIALG 596
                ++++LL            + +V+E++  N  L   +     R   +  V +I+  
Sbjct: 82  SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGEN--LLALIKKYEHRGIPLIYVKQISKQ 139

Query: 597 VARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMA-KISDFGISKLLNKD-----Q 650
           +  GL Y+H  C   IIH DIKP+NVL+++     N +  KI+D G +   ++      Q
Sbjct: 140 LLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ 197

Query: 651 TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           TR          Y +PE L   P     D++S   ++ E+I G 
Sbjct: 198 TRE---------YRSPEVLLGAPWGCGADIWSTACLIFELITGD 232

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 81.6 bits (202), Expect = 9e-17
 Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 30/211 (14%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT-----ELKIIGRTHHKN 548
           + +G GS GKV         TQ ++A+K + +  +   +  M      E+  +    H +
Sbjct: 15  ETLGEGSFGKVKLA--THYKTQQKVALKFISR--QLLKKSDMHMRVEREISYLKLLRHPH 70

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV---EIALGVARGLLYLH 605
           +++L    +     ++V E    G L +++  + +      R    +I   +     Y H
Sbjct: 71  IIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIE----YCH 125

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYV 664
                 I+H D+KP+N+L     LD N   KI+DFG+S ++      +T     G+  Y 
Sbjct: 126 RHK---IVHRDLKPENLL-----LDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYA 174

Query: 665 APEWLRNVPVT-TKVDVFSFGVMLLEIICGR 694
           APE +        +VDV+S G++L  ++ GR
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVLYVMLVGR 205

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 81.1 bits (201), Expect = 9e-17
 Identities = 46/209 (22%), Positives = 91/209 (43%), Gaps = 15/209 (7%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKK--LEKDIEKTNEEFMTELKIIGRTHHK 547
           + ++  +G G+ G+VY+       T   +A+K+  LE + E      + E+ ++    H+
Sbjct: 36  YRRITKLGEGTYGEVYKA--IDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQ-RPGWVQRVEIALGVARGLLYLHE 606
           N++ L        +  L++E   N  L  ++          ++       +  G+ + H 
Sbjct: 94  NIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKS--FLYQLINGVNFCHS 150

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAP 666
               + +H D+KPQN+LL +       + KI DFG+++       R  T+   T+ Y  P
Sbjct: 151 R---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG-IPIRQFTHEIITLWYRPP 206

Query: 667 EWLRNVPV-TTKVDVFSFGVMLLEIICGR 694
           E L      +T VD++S   +  E++   
Sbjct: 207 EILLGSRHYSTSVDIWSIACIWAEMLMKT 235

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276

 Score = 77.4 bits (189), Expect = 8e-16
 Identities = 42/287 (14%), Positives = 82/287 (28%), Gaps = 33/287 (11%)

Query: 18  YGLHGQTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYL----LGIWFDKIPEK 73
              +G  +  +    +++AG     LSP+  F        G L +      +W     + 
Sbjct: 7   IPFNGVGTSVLPAYQTLSAGQ--YLLSPNQRFKLLLQGD-GNLVIQDNGATVWVANEQQP 63

Query: 74  TLVWAADRDSPA-----EAGSKITLTNDGKLLLTYFNGSVQQIYSGAASLALMQNDGNFV 128
                  R+  A                 + +    N +         +  ++Q+DGN V
Sbjct: 64  FSSTIPLRNKKAPLAFYVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIV 123

Query: 129 LKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLS 188
           L ++ +              +   +L  G +L         Y  G   L  Q DGNLV  
Sbjct: 124 LVDSLALWNGTPAIPLVPGAIDSLLLAPGSELVQGVV----YGAGASKLVFQGDGNLVA- 178

Query: 189 AYHFADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDY-YHRAT 247
            Y       W  GT     V  +F     + +  +    ++       + T  +      
Sbjct: 179 -YGPNGAATWNAGTQGKGAVRAVFQGDGNLVVYGAGNAVLWH------SHTGGHASAVLR 231

Query: 248 IDGHGNFQQFAYHKST---SSRWTRVWRAVNDPCIVNCICGVYGMCT 291
           +  +G+       +        +   +R       +N       + T
Sbjct: 232 LQANGSIA--ILDEKPVWARFGFQPTYRH---IRKINPDQKPIDIWT 273

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 19/163 (11%), Positives = 34/163 (20%), Gaps = 11/163 (6%)

Query: 134 SAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFA 193
                      T  +   Q L  G+ L S +          + L +Q DGNLV+      
Sbjct: 3   GRTRIPFNGVGTSVLPAYQTLSAGQYLLSPN--------QRFKLLLQGDGNLVIQDNGAT 54

Query: 194 DPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGN 253
               W        + ++                              D     + D    
Sbjct: 55  ---VWVANEQQPFSSTIPLRNKKAPLAFYVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNR 111

Query: 254 FQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNE 296
                           +      P I      +  +  +  +E
Sbjct: 112 THLVLQDDGNIVLVDSLALWNGTPAIPLVPGAIDSLLLAPGSE 154

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 77.7 bits (192), Expect = 2e-15
 Identities = 46/258 (17%), Positives = 91/258 (35%), Gaps = 67/258 (25%)

Query: 461 LIKRRNYFDPNSMEINFREFTFQELQEATKGFSKL--VGTGSSGKVYRGILRLKDTQIEI 518
             + R Y+D  S  + +              +  +  +G G   +V+  I        ++
Sbjct: 16  THRPREYWDYESHVVEW---------GNQDDYQLVRKLGRGKYSEVFEAINI--TNNEKV 64

Query: 519 AVKKLEKDIEKTNEEFMTELKIIGR-THHKNLVRLLG-FCSEEDKR--LLVYELMPN--- 571
            VK L+   +K   +   E+KI+       N++ L         +   L+   +      
Sbjct: 65  VVKILKPVKKK---KIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFK 121

Query: 572 ---GTLSN----FLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLL 624
               TL++    F  +E               + + L Y H      I+H D+KP NV++
Sbjct: 122 QLYQTLTDYDIRFYMYE---------------ILKALDYCHSM---GIMHRDVKPHNVMI 163

Query: 625 DLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV------APEWLRNVPV-TTK 677
           D +        ++ D+G+++  +  Q             V       PE L +  +    
Sbjct: 164 DHEHRKL----RLIDWGLAEFYHPGQEYN--------VRVASRYFKGPELLVDYQMYDYS 211

Query: 678 VDVFSFGVMLLEIICGRR 695
           +D++S G ML  +I  + 
Sbjct: 212 LDMWSLGCMLASMIFRKE 229

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 76.4 bits (189), Expect = 2e-15
 Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 23/212 (10%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKK--LEKDIEKTNEEFMTELKIIGRTHHK 547
           + KL  +G G+ G V++   + ++T   +A+K+  L+ D E      + E+ ++    HK
Sbjct: 4   YEKLEKIGEGTYGTVFKA--KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR--PGWVQRVEIALGVARGLLYLH 605
           N+VRL      + K  LV+E      L  +         P  V+       + +GL + H
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKS--FLFQLLKGLGFCH 118

Query: 606 EECETQIIHCDIKPQNVLLDLK-TLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
                 ++H D+KPQN+L++    L      K+++FG+++       R  +    T+ Y 
Sbjct: 119 SR---NVLHRDLKPQNLLINRNGEL------KLANFGLARAFG-IPVRCYSAEVVTLWYR 168

Query: 665 APEWLRNVPV-TTKVDVFSFGVMLLEIICGRR 695
            P+ L    + +T +D++S G +  E+    R
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGR 200

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 77.4 bits (191), Expect = 3e-15
 Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 30/212 (14%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKNLVR 551
           K +G+G+ G V          +  +A+KKL +  +          EL ++   +HKN++ 
Sbjct: 31  KPIGSGAQGIVCAAYDA--ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIG 88

Query: 552 LLG-FCSEEDKRL-----LVYELMP---NGTLSNFLFHEGQRPGWVQRVEIALGVARGLL 602
           LL  F  ++         +V ELM       +   L HE       Q       +  G+ 
Sbjct: 89  LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQ-------MLCGIK 141

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           +LH      IIH D+KP N+++      ++   KI DFG+++        T      T  
Sbjct: 142 HLHS---AGIIHRDLKPSNIVVK-----SDCTLKILDFGLARTAGTSFMMTPY--VVTRY 191

Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           Y APE +  +     VD++S G ++ E+I G 
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 223

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 74.9 bits (185), Expect = 8e-15
 Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 22/210 (10%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEI-AVKK--LEKDIEKTNEEFMTELKIIGRTHH 546
           +  L  +G G+ G VY+     ++   E  A+KK  LEK+ E      + E+ I+    H
Sbjct: 4   YHGLEKIGEGTYGVVYKA----QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59

Query: 547 KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE 606
            N+V+L      + + +LV+E +    L   L         V      L +  G+ Y H+
Sbjct: 60  SNIVKLYDVIHTKKRLVLVFEHLDQD-LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118

Query: 607 ECETQIIHCDIKPQNVLLDLK-TLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
               +++H D+KPQN+L++ +  L      KI+DFG+++       R  T+   T+ Y A
Sbjct: 119 R---RVLHRDLKPQNLLINREGEL------KIADFGLARAFG-IPVRKYTHEIVTLWYRA 168

Query: 666 PEWLRNVPV-TTKVDVFSFGVMLLEIICGR 694
           P+ L      +T +D++S G +  E++ G 
Sbjct: 169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 74.9 bits (185), Expect = 9e-15
 Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 26/212 (12%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEI-AVKK--LEKDIEKTNEEFMTELKIIGRTHH 546
           + KL  VG G+ G VY+     KD+Q  I A+K+  L+ + E      + E+ ++   HH
Sbjct: 23  YQKLEKVGEGTYGVVYKA----KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78

Query: 547 KNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR--PGWVQRVEIALGVARGLLYL 604
            N+V L+     E    LV+E M    L   L           ++       + RG+ + 
Sbjct: 79  PNIVSLIDVIHSERCLTLVFEFMEKD-LKKVLDENKTGLQDSQIKI--YLYQLLRGVAHC 135

Query: 605 HEECETQIIHCDIKPQNVLLDLK-TLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           H+    +I+H D+KPQN+L++    L      K++DFG+++       R+ T+   T+ Y
Sbjct: 136 HQH---RILHRDLKPQNLLINSDGAL------KLADFGLARAFG-IPVRSYTHEVVTLWY 185

Query: 664 VAPEWLRNVPV-TTKVDVFSFGVMLLEIICGR 694
            AP+ L      +T VD++S G +  E+I G+
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 74.5 bits (184), Expect = 1e-14
 Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 27/215 (12%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF-MT---ELKIIGRTH 545
           F +L  +G G+   VY+G    K T + +A+K+++ D E   E    T   E+ ++    
Sbjct: 7   FKQLEKLGNGTYATVYKG--LNKTTGVYVALKEVKLDSE---EGTPSTAIREISLMKELK 61

Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFL--FHEGQRPGWVQRVEIALGVA---RG 600
           H+N+VRL      E+K  LV+E M N  L  ++     G  P  ++   +        +G
Sbjct: 62  HENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG 120

Query: 601 LLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGT 660
           L + HE    +I+H D+KPQN+L++ +        K+ DFG+++        T ++   T
Sbjct: 121 LAFCHEN---KILHRDLKPQNLLINKRGQ-----LKLGDFGLARAFG-IPVNTFSSEVVT 171

Query: 661 MGYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICGR 694
           + Y AP+ L      +T +D++S G +L E+I G+
Sbjct: 172 LWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 74.6 bits (184), Expect = 1e-14
 Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 30/214 (14%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE-----FMTELKIIGRT 544
           + KL  +G G+   VY+G  + K T   +A+K++  +    +EE      + E+ ++   
Sbjct: 4   YIKLDKLGEGTYATVYKG--KSKLTDNLVALKEIRLE----HEEGAPCTAIREVSLLKDL 57

Query: 545 HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR--PGWVQRVEIALGVARGLL 602
            H N+V L      E    LV+E +    L  +L   G       V+     L   RGL 
Sbjct: 58  KHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQL--LRGLA 114

Query: 603 YLHEECETQIIHCDIKPQNVLLDLK-TLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
           Y H +   +++H D+KPQN+L++ +  L      K++DFG+++  +   T+T  N   T+
Sbjct: 115 YCHRQ---KVLHRDLKPQNLLINERGEL------KLADFGLARAKS-IPTKTYDNEVVTL 164

Query: 662 GYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICGR 694
            Y  P+ L      +T++D++  G +  E+  GR
Sbjct: 165 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 74.2 bits (183), Expect = 2e-14
 Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 26/214 (12%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE---FMT--ELKIIGRT 544
           + KL  +G G    VY+   R K+T   +A+KK++       ++        E+K++   
Sbjct: 12  YEKLDFLGEGQFATVYKA--RDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69

Query: 545 HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQR--PGWVQRVEIALGVARGLL 602
            H N++ LL     +    LV++ M    L   +        P  ++     L   +GL 
Sbjct: 70  SHPNIIGLLDAFGHKSNISLVFDFMETD-LEVIIKDNSLVLTPSHIKA--YMLMTLQGLE 126

Query: 603 YLHEECETQIIHCDIKPQNVLLDLK-TLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
           YLH+     I+H D+KP N+LLD    L      K++DFG++K       R  T+   T 
Sbjct: 127 YLHQH---WILHRDLKPNNLLLDENGVL------KLADFGLAKSFG-SPNRAYTHQVVTR 176

Query: 662 GYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICGR 694
            Y APE L    +    VD+++ G +L E++   
Sbjct: 177 WYRAPELLFGARMYGVGVDMWAVGCILAELLLRV 210

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 72.7 bits (179), Expect = 4e-14
 Identities = 49/212 (23%), Positives = 83/212 (39%), Gaps = 49/212 (23%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR-THHKNLV 550
            S+++G G +GKV +     K TQ + A+K L+        +   E+++  R +   ++V
Sbjct: 22  TSQVLGLGINGKVLQIFN--KRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIV 74

Query: 551 RLLGFC----SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVE-----IALGVARGL 601
           R++       +     L+V E +  G L    F   Q  G     E     I   +   +
Sbjct: 75  RIVDVYENLYAGRKCLLIVMECLDGGEL----FSRIQDRGDQAFTEREASEIMKSIGEAI 130

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            YLH      I H D+KP+N+L   K  +     K++DFG                    
Sbjct: 131 QYLHSI---NIAHRDVKPENLLYTSKRPNAIL--KLTDFGF------------------- 166

Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
              A E           D++S GV++  ++CG
Sbjct: 167 ---AKETTGE-KYDKSCDMWSLGVIMYILLCG 194

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 73.7 bits (181), Expect = 8e-14
 Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 30/212 (14%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKNLVR 551
           K +G+G+ G V      +      +A+KKL +  +          EL ++   +HKN++ 
Sbjct: 68  KPIGSGAQGIVCAAYDAV--LDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 125

Query: 552 LL-----GFCSEEDKRL-LVYELMP---NGTLSNFLFHEGQRPGWVQRVEIALGVARGLL 602
           LL         EE + + LV ELM       +   L HE       Q       +  G+ 
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQ-------MLCGIK 178

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           +LH      IIH D+KP N+++      ++   KI DFG+++        T      T  
Sbjct: 179 HLHS---AGIIHRDLKPSNIVVK-----SDCTLKILDFGLARTAGTSFMMTPY--VVTRY 228

Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           Y APE +  +     VD++S G ++ E++  +
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 72.3 bits (178), Expect = 1e-13
 Identities = 50/239 (20%), Positives = 85/239 (35%), Gaps = 73/239 (30%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT-----------ELKIIG 542
           + + +GS G V  G+       I +A+K++   +       +            E++++ 
Sbjct: 28  RFISSGSYGAVCAGVDS---EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLN 84

Query: 543 RTHHKNLVRLLG----FCSEEDKRL-LVYELM----------PNGTLSN-----FLFHEG 582
             HH N++ L      F      +L LV ELM              +S      F++H  
Sbjct: 85  HFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYH-- 142

Query: 583 QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI 642
                         +  GL  LHE     ++H D+ P N+L     L  N    I DF +
Sbjct: 143 --------------ILLGLHVLHE---AGVVHRDLHPGNIL-----LADNNDITICDFNL 180

Query: 643 SKLLNKDQTRTDTNMRGTMGYVAPEWLR-------NVPVTTKVDVFSFGVMLLEIICGR 694
           ++    D  +T         YV   W R           T  VD++S G ++ E+   +
Sbjct: 181 AREDTADANKTH--------YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 71.1 bits (175), Expect = 2e-13
 Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 43/227 (18%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF-MT---ELKIIGRTH 545
           + KL  +G G+ G+V++   R + T  ++A+KK+  + EK  E F +T   E+KI+    
Sbjct: 19  YEKLAKIGQGTFGEVFKA--RHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLK 74

Query: 546 HKNLVRLLGFCSEEDKRL--------LVYELMPN---GTLSN--FLFHEGQRPGWVQRVE 592
           H+N+V L+  C  +            LV++   +   G LSN    F   +    +Q + 
Sbjct: 75  HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML- 133

Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLK-TLDTNYMAKISDFGISKLLN---K 648
                  GL Y+H     +I+H D+K  NVL+     L      K++DFG+++  +    
Sbjct: 134 -----LNGLYYIHRN---KILHRDMKAANVLITRDGVL------KLADFGLARAFSLAKN 179

Query: 649 DQTRTDTNMRGTMGYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICGR 694
            Q    TN   T+ Y  PE L         +D++  G ++ E+    
Sbjct: 180 SQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRS 226

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 70.8 bits (174), Expect = 3e-13
 Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 64/229 (27%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKNLVR 551
           + VG+G+ G V   +     T  ++A+KKL +  +          EL+++    H+N++ 
Sbjct: 31  QPVGSGAYGAVCSAVDG--RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIG 88

Query: 552 LLG-FCSEEDKRL-----LVYELMP--------NGTLSN-----FLFHEGQRPGWVQRVE 592
           LL  F  +E         LV   M         +  L        ++             
Sbjct: 89  LLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQ------------ 136

Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
               + +GL Y+H      IIH D+KP N+      ++ +   KI DFG+++  + + T 
Sbjct: 137 ----MLKGLRYIHA---AGIIHRDLKPGNLA-----VNEDCELKILDFGLARQADSEMT- 183

Query: 653 TDTNMRGTMGYVAPEWLR-------NVPVTTKVDVFSFGVMLLEIICGR 694
                    GYV   W R        +  T  VD++S G ++ E+I G+
Sbjct: 184 ---------GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 70.8 bits (174), Expect = 3e-13
 Identities = 47/219 (21%), Positives = 86/219 (39%), Gaps = 45/219 (20%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKNLVR 551
             VG+G+ G V   I +   +  ++A+KKL +  +          EL ++    H+N++ 
Sbjct: 30  THVGSGAYGSVCSAIDK--RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIG 87

Query: 552 LL-----GFCSEEDKRL-LVYELMP---NGTLSNFLFHEGQRPGWVQRVEIALGVARGLL 602
           LL                LV   M       +      E  +    Q       + +GL 
Sbjct: 88  LLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQ-------MLKGLK 140

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
           Y+H      ++H D+KP N+      ++ +   KI DFG+++  + + T          G
Sbjct: 141 YIHS---AGVVHRDLKPGNLA-----VNEDCELKILDFGLARHADAEMT----------G 182

Query: 663 YVAPEWLR-------NVPVTTKVDVFSFGVMLLEIICGR 694
           YV   W R        +     VD++S G ++ E++ G+
Sbjct: 183 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 70.0 bits (172), Expect = 7e-13
 Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 54/226 (23%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT----ELKIIGRTHHKNL 549
             +G G+ G V          ++ +A+KK+       ++ +      E+KI+ R  H+N+
Sbjct: 33  SYIGEGAYGMVCSAYD--NLNKVRVAIKKISP---FEHQTYCQRTLREIKILLRFRHENI 87

Query: 550 VRLLGF----CSEEDKRL-LVYELMP--------NGTLSN-----FLFHEGQRPGWVQRV 591
           + +         E+ K + +V +LM            LSN     FL+            
Sbjct: 88  IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ----------- 136

Query: 592 EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT 651
                + RGL Y+H      ++H D+KP N+L     L+T    KI DFG++++ + D  
Sbjct: 137 -----ILRGLKYIHS---ANVLHRDLKPSNLL-----LNTTCDLKICDFGLARVADPDHD 183

Query: 652 RTD--TNMRGTMGYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICGR 694
            T   T    T  Y APE + N    T  +D++S G +L E++  R
Sbjct: 184 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 69.8 bits (171), Expect = 1e-12
 Identities = 51/221 (23%), Positives = 99/221 (44%), Gaps = 47/221 (21%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKII------GRTHHK 547
           K++G GS G+V +     K     +A+K + ++ ++ + +   E++I+       + +  
Sbjct: 103 KVIGKGSFGQVVKAY-DHK-VHQHVALKMV-RNEKRFHRQAAEEIRILEHLRKQDKDNTM 159

Query: 548 NLVRLLGF-------CSEEDKRLLVYELM-PNGTLSNFLFHEGQRPGWVQRV-EIALGVA 598
           N++ +L         C       + +EL+  N  L   +     +   +  V + A  + 
Sbjct: 160 NVIHMLENFTFRNHIC-------MTFELLSMN--LYELIKKNKFQGFSLPLVRKFAHSIL 210

Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD-----QTRT 653
           + L  LH+    +IIHCD+KP+N+L  LK    + + K+ DFG S   ++      Q+R 
Sbjct: 211 QCLDALHKN---RIIHCDLKPENIL--LKQQGRSGI-KVIDFGSSCYEHQRVYTYIQSRF 264

Query: 654 DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
                    Y APE +        +D++S G +L E++ G 
Sbjct: 265 ---------YRAPEVILGARYGMPIDMWSLGCILAELLTGY 296

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 68.8 bits (169), Expect = 1e-12
 Identities = 51/235 (21%), Positives = 97/235 (41%), Gaps = 63/235 (26%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT----ELKIIGRTHHKNL 549
           K +G G +G V+  +    D    +A+KK    I  T+ + +     E+KII R  H N+
Sbjct: 17  KPLGCGGNGLVFSAVDN--DCDKRVAIKK----IVLTDPQSVKHALREIKIIRRLDHDNI 70

Query: 550 VRLLGFCSEEDKRL--------------LVYELMP--------NGTLSN-----FLFHEG 582
           V++         +L              +V E M          G L       F++   
Sbjct: 71  VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMY--- 127

Query: 583 QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI 642
                 Q       + RGL Y+H      ++H D+KP N+ ++ +    + + KI DFG+
Sbjct: 128 ------Q-------LLRGLKYIHS---ANVLHRDLKPANLFINTE----DLVLKIGDFGL 167

Query: 643 SKLLNKDQTRTD--TNMRGTMGYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICGR 694
           +++++   +     +    T  Y +P  L +    T  +D+++ G +  E++ G+
Sbjct: 168 ARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 68.4 bits (168), Expect = 2e-12
 Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 35/221 (15%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF-MT---E---LKIIG 542
           +  +  +G G+ GKV++    LK+    +A+K++     +  E   ++   E   L+ + 
Sbjct: 13  YECVAEIGEGAYGKVFKAR-DLKNGGRFVALKRVRVQTGE--EGMPLSTIREVAVLRHLE 69

Query: 543 RTHHKNLVRLL----GFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEI---A 594
              H N+VRL        ++ + +L LV+E +    L+ +L  +      V    I    
Sbjct: 70  TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL--DKVPEPGVPTETIKDMM 126

Query: 595 LGVARGLLYLHEECETQIIHCDIKPQNVLLDLK-TLDTNYMAKISDFGISKLLNKDQTRT 653
             + RGL +LH      ++H D+KPQN+L+     +      K++DFG++++        
Sbjct: 127 FQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQI------KLADFGLARI--YSFQMA 175

Query: 654 DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
            T++  T+ Y APE L      T VD++S G +  E+   +
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 68.0 bits (167), Expect = 2e-12
 Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 33/221 (14%)

Query: 492 FSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFM--------TELKII 541
           +  +  +G G+ G VY+   R   +   +A+K +           +          L+ +
Sbjct: 11  YEPVAEIGVGAYGTVYKA--RDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRL 68

Query: 542 GRTHHKNLVRLL----GFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRPGWVQRVEI--- 593
               H N+VRL+       ++ + ++ LV+E +    L  +L  +   P  +    I   
Sbjct: 69  EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDL 125

Query: 594 ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT 653
                RGL +LH      I+H D+KP+N+L+           K++DFG++++        
Sbjct: 126 MRQFLRGLDFLHAN---CIVHRDLKPENILVTSGG-----TVKLADFGLARI--YSYQMA 175

Query: 654 DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
            T +  T+ Y APE L      T VD++S G +  E+   +
Sbjct: 176 LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 68.6 bits (168), Expect = 2e-12
 Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 45/221 (20%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKII------GRTHHK 547
            L+G GS G+V +   R    Q  +A+K + K+ +    +   E++++            
Sbjct: 60  SLIGKGSFGQVVKAYDR--VEQEWVAIKII-KNKKAFLNQAQIEVRLLELMNKHDTEMKY 116

Query: 548 NLVRLLGF-------CSEEDKRLLVYELM-PNGTLSNFLFHEGQRPGWVQRV-EIALGVA 598
            +V L          C       LV+E++  N  L + L +   R   +    + A  + 
Sbjct: 117 YIVHLKRHFMFRNHLC-------LVFEMLSYN--LYDLLRNTNFRGVSLNLTRKFAQQMC 167

Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD-----QTRT 653
             LL+L    E  IIHCD+KP+N+LL           KI DFG S  L +      Q+R 
Sbjct: 168 TALLFLATP-ELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQYIQSRF 223

Query: 654 DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
                    Y +PE L  +P    +D++S G +L+E+  G 
Sbjct: 224 ---------YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 68.1 bits (167), Expect = 2e-12
 Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 46/220 (20%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKNLVR 551
             VG+G+ G V         T + +AVKKL +  +       T  EL+++    H+N++ 
Sbjct: 35  SPVGSGAYGSVCAAFDT--KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 92

Query: 552 LL-----GFCSEEDKRL-LVYELMP----NGTLSNFLFHEGQRPGWVQRVEIALGVARGL 601
           LL         EE   + LV  LM     N      L  +  +    Q       + RGL
Sbjct: 93  LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-------ILRGL 145

Query: 602 LYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTM 661
            Y+H      IIH D+KP N+      ++ +   KI DFG+++    + T          
Sbjct: 146 KYIHS---ADIIHRDLKPSNLA-----VNEDCELKILDFGLARHTADEMT---------- 187

Query: 662 GYVAPEWLR-------NVPVTTKVDVFSFGVMLLEIICGR 694
           GYVA  W R        +     VD++S G ++ E++ GR
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 66.5 bits (163), Expect = 8e-12
 Identities = 51/234 (21%), Positives = 94/234 (40%), Gaps = 63/234 (26%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKL-----EKDIEKTNEEFMTELKIIGRTHHKN 548
            L+G G+ G V     +   T   +A+KK+          +T    + E+KI+    H+N
Sbjct: 17  SLLGEGAYGVVCSATHK--PTGEIVAIKKIEPFDKPLFALRT----LREIKILKHFKHEN 70

Query: 549 LVRLLGF----CSEEDKRL-LVYELMP--------NGTLSN-----FLFHEGQRPGWVQR 590
           ++ +         E    + ++ ELM            LS+     F++         Q 
Sbjct: 71  IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIY---------Q- 120

Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL--NK 648
                   R +  LH    + +IH D+KP N+L     +++N   K+ DFG+++++  + 
Sbjct: 121 ------TLRAVKVLHG---SNVIHRDLKPSNLL-----INSNCDLKVCDFGLARIIDESA 166

Query: 649 DQTRTDTNMRGTM-GYV------APEWLRNVPV-TTKVDVFSFGVMLLEIICGR 694
                 T  +  M  +V      APE +      +  +DV+S G +L E+   R
Sbjct: 167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 65.7 bits (160), Expect = 1e-11
 Identities = 46/203 (22%), Positives = 77/203 (37%), Gaps = 60/203 (29%)

Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
           +  +  VA+G+ +L      + IH D+  +N+LL         + KI DFG+++ + KD 
Sbjct: 196 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLS-----EKNVVKICDFGLARDIYKD- 246

Query: 651 TRTDTNMRGTMGYV-----APEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEE 705
                 +R     +     APE + +   T + DV+SFGV+L EI               
Sbjct: 247 ---PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI--------------- 288

Query: 706 SEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMA------------MVGLWC 753
                           L  +    V  D E    L+   RM             M+  W 
Sbjct: 289 --------------FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCW- 333

Query: 754 NHPDPNLRPSMKKVIHMLEGTLE 776
            H +P+ RP+  +++  L   L+
Sbjct: 334 -HGEPSQRPTFSELVEHLGNLLQ 355

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 61.5 bits (149), Expect = 4e-10
 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 6/93 (6%)

Query: 492 FSKLVGTGSSGKVYRGI---LRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKI-IGRTHH 546
             K +G G+ G+V       +    T   +AVK L++      +   M+ELKI I   HH
Sbjct: 26  LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 85

Query: 547 KNLVRLLGFCSEEDKRLLV-YELMPNGTLSNFL 578
            N+V LLG C++    L+V  E    G LS +L
Sbjct: 86  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 118

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 65.5 bits (160), Expect = 3e-11
 Identities = 49/245 (20%), Positives = 91/245 (37%), Gaps = 69/245 (28%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKNLVR 551
            L+G GS G VY    +  +T+  +A+KK+ +  E   +      E+ I+ R     ++R
Sbjct: 32  HLIGRGSYGYVYLAYDK--NTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIR 89

Query: 552 LLGFCSEEDKRL-----LVYELMP---------NGTLSN-----FLFHEGQRPGWVQRVE 592
           L      +D        +V E+              L+       L++            
Sbjct: 90  LYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYN------------ 137

Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
               +  G  ++HE   + IIH D+KP N L     L+ +   K+ DFG+++ +N ++  
Sbjct: 138 ----LLLGENFIHE---SGIIHRDLKPANCL-----LNQDCSVKVCDFGLARTINSEKDT 185

Query: 653 TDTNMRGTM---------------GYV------APEWLRNVPV-TTKVDVFSFGVMLLEI 690
              N                     +V      APE +      T  +D++S G +  E+
Sbjct: 186 NIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245

Query: 691 ICGRR 695
           +   +
Sbjct: 246 LNMLQ 250

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 65.2 bits (159), Expect = 4e-11
 Identities = 50/246 (20%), Positives = 92/246 (37%), Gaps = 74/246 (30%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT--ELKIIGRTHHKNLVR 551
            L+GTGS G V     +    +  +A+KK+ +  E   +      E+ I+ R +H ++V+
Sbjct: 59  HLIGTGSYGHVCEAYDK--LEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVK 116

Query: 552 LLGFC----SEEDKRL-LVYELMP---------NGTLSN-----FLFHEGQRPGWVQRVE 592
           +L        E+   L +V E+              L+       L+             
Sbjct: 117 VLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLY---------N--- 164

Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS--------- 643
               +  G+ Y+H      I+H D+KP N L     ++ +   K+ DFG++         
Sbjct: 165 ----LLVGVKYVHS---AGILHRDLKPANCL-----VNQDCSVKVCDFGLARTVDYPENG 212

Query: 644 ----------KLLNKDQTRTDTNMRGTM-GYV------APEWLRNVPV-TTKVDVFSFGV 685
                       +N        N++  + G+V      APE +      T  +DV+S G 
Sbjct: 213 NSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGC 272

Query: 686 MLLEII 691
           +  E++
Sbjct: 273 IFAELL 278

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 64.7 bits (158), Expect = 4e-11
 Identities = 49/234 (20%), Positives = 89/234 (38%), Gaps = 57/234 (24%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKII------GRTHHK 547
             +G G+ GKV    L     + ++A+K + +++ K  E    E+ ++       + +  
Sbjct: 25  GNLGEGTFGKVVE-CLDHARGKSQVALKII-RNVGKYREAARLEINVLKKIKEKDKENKF 82

Query: 548 NLVRLLGF-------CSEEDKRLLVYELM-PNGTLSNFLFHEGQRPGWVQRV-EIALGVA 598
             V +  +       C       + +EL+  N     FL     +P  +  V  +A  + 
Sbjct: 83  LCVLMSDWFNFHGHMC-------IAFELLGKN--TFEFLKENNFQPYPLPHVRHMAYQLC 133

Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMA--------------KISDFGISK 644
             L +LHE    Q+ H D+KP+N+L      +T Y                +++DFG + 
Sbjct: 134 HALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 190

Query: 645 LLNKD-----QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
             ++       TR          Y  PE +  +      DV+S G +L E   G
Sbjct: 191 FDHEHHTTIVATRH---------YRPPEVILELGWAQPCDVWSIGCILFEYYRG 235

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 64.5 bits (157), Expect = 4e-11
 Identities = 40/179 (22%), Positives = 64/179 (35%), Gaps = 56/179 (31%)

Query: 564 LVYELMPNG-TLSNFL--FHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQ 620
           +V+E++  G  L  ++   +    P    + +I   V +GL YLH +C  +IIH DIKP+
Sbjct: 122 MVFEVL--GHHLLKWIIKSNYQGLPLPCVK-KIIQQVLQGLDYLHTKC--RIIHTDIKPE 176

Query: 621 NVLLDLKTLDTNYMA--------------------------------------------K 636
           N+LL +       +A                                            K
Sbjct: 177 NILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVK 236

Query: 637 ISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR 695
           I+D G +  ++K  T        T  Y + E L      T  D++S   M  E+  G  
Sbjct: 237 IADLGNACWVHKHFTEDIQ----TRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDY 291

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119

 Score = 58.4 bits (141), Expect = 1e-10
 Identities = 27/146 (18%), Positives = 42/146 (28%), Gaps = 35/146 (23%)

Query: 62  LLGIWFDKIPEKTLVWAADRDSPAEAGS-KITLTNDGKLLLTYFNGSV---QQIYSGAAS 117
           +     D    + L      +        +  +  D  L+L   N  +        G   
Sbjct: 4   IFSKQPDDNHPQILHATESLEILFGTHVYRFIMQTDCNLVLYDNNNPIWATNTGGLGNGC 63

Query: 118 LALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTL 177
            A++Q DG  V+    +  VW S                           A    G+Y L
Sbjct: 64  RAVLQPDGVLVVITNENVTVWQS-------------------------PVAG-KAGHYVL 97

Query: 178 EMQADGNLVLSAYHFADPGYWYTGTV 203
            +Q D N+V+          W T TV
Sbjct: 98  VLQPDRNVVIY-----GDALWATQTV 118

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119

 Score = 48.0 bits (114), Expect = 5e-07
 Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 5/86 (5%)

Query: 146 DTILPGQVLLT-GKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVT 204
           + I   Q      + L++       + T  Y   MQ D NLVL  Y   +   W T T  
Sbjct: 2   NIIFSKQPDDNHPQILHATESLEILFGTHVYRFIMQTDCNLVL--YD-NNNPIWATNTGG 58

Query: 205 L-NNVSLIFNQSAFMYLINSTGDNIF 229
           L N    +      + +I +    ++
Sbjct: 59  LGNGCRAVLQPDGVLVVITNENVTVW 84

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 62.8 bits (153), Expect = 1e-10
 Identities = 56/242 (23%), Positives = 97/242 (40%), Gaps = 69/242 (28%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT----ELKIIGR-THHKN 548
           K +G G+ G V++ I   + T   +AVKK+    +  N         E+ I+   + H+N
Sbjct: 15  KKLGKGAYGIVWKSID--RRTGEVVAVKKIFDAFQ--NSTDAQRTFREIMILTELSGHEN 70

Query: 549 LVRLLG-FCSEEDKRL-LVYELMP--------NGTLSN-----FLFHEGQRPGWVQRVEI 593
           +V LL    ++ D+ + LV++ M            L        ++         Q    
Sbjct: 71  IVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVY---------Q---- 117

Query: 594 ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT 653
              + + + YLH      ++H D+KP N+L     L+     K++DFG+S+     +  T
Sbjct: 118 ---LIKVIKYLHS---GGLLHRDMKPSNIL-----LNAECHVKVADFGLSRSFVNIRRVT 166

Query: 654 DTNMRGTM--------------GYV------APEWLRNVPV-TTKVDVFSFGVMLLEIIC 692
           +                      YV      APE L      T  +D++S G +L EI+C
Sbjct: 167 NNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILC 226

Query: 693 GR 694
           G+
Sbjct: 227 GK 228

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 63.7 bits (154), Expect = 2e-10
 Identities = 53/357 (14%), Positives = 113/357 (31%), Gaps = 97/357 (27%)

Query: 468 FDPNSMEINFRE------------FTFQELQEATKG-FSK-----LVGTGSS-GKVYR-- 506
           F+    +  +++            F  +++Q+  K   SK     ++ +  +     R  
Sbjct: 9   FETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLF 68

Query: 507 GILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY 566
             L  K  ++   V+K  +++ + N +F+    I       +++  + +  + D+     
Sbjct: 69  WTLLSKQEEM---VQKFVEEVLRINYKFLMS-PIKTEQRQPSMMTRM-YIEQRDR----- 118

Query: 567 ELMPNGTLSNFLFHEGQ--RPGWVQRVEIALGVARGLLYLHEECETQIIH----CDIKP- 619
                      L+++ Q      V R++  L + + LL L    +  +I        K  
Sbjct: 119 -----------LYNDNQVFAKYNVSRLQPYLKLRQALLELRPA-KNVLIDGVLGSG-KTW 165

Query: 620 --QNVLLDLKTLDTNYMAKISDFGIS--KLLNKDQTRTDTNMRGTMGY-VAPEWLRNV-- 672
              +V L  K           DF I    L N +   T   M   + Y + P W      
Sbjct: 166 VALDVCLSYKVQCKM------DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH 219

Query: 673 PVTTKVDVFSFGVMLLEIICGRRHIE-LSRVEEESEEVDIVLSD----WVI-----SC-- 720
               K+ + S    L  ++  + +   L           +VL +            SC  
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCL-----------LVLLNVQNAKAWNAFNLSCKI 268

Query: 721 -MLSRNLQVL-------VSHDP--EVLSDLERFERMAMVGLWCNHPDPNLRPSMKKV 767
            + +R  QV         +H         L   E  +++  + +    +L   +   
Sbjct: 269 LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT 325

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.6 bits (107), Expect = 6e-05
 Identities = 89/625 (14%), Positives = 178/625 (28%), Gaps = 201/625 (32%)

Query: 4   KRIVP---CVLTLILKFYGLHGQTSPNISL-GSSITAGSNTSWLSPSGDFAFGFYSLF-G 58
           K  V      L L      L  + + N+ + G     GS  +W++     ++        
Sbjct: 128 KYNVSRLQPYLKLRQALLEL--RPAKNVLIDG---VLGSGKTWVALDVCLSYKVQCKMDF 182

Query: 59  GLYLLGIWFDKIPE------KTLVWAADRD--SPAEAGSKITL-TNDGKLLLTYFNGSVQ 109
            ++ L +     PE      + L++  D +  S ++  S I L  +  +  L        
Sbjct: 183 KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL--LKS 240

Query: 110 QIYSGAASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPG-QVLLTGKKLYSNSRGTA 168
           + Y     L         VL N  +A  W++F+          ++LLT     +  +   
Sbjct: 241 KPY--ENCL--------LVLLNVQNAKAWNAFNL-------SCKILLT-----TRFKQVT 278

Query: 169 DYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTLNNVSLIFNQSAFM-YLINSTGDN 227
           D+ +   T                          ++L++ S+          L+      
Sbjct: 279 DFLSAATTTH------------------------ISLDHHSMTLTPDEVKSLLLKYLDCR 314

Query: 228 IFRLTRNVMT--PTEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICG 285
              L R V+T  P       + I            +   + W   W+ VN   +   I  
Sbjct: 315 PQDLPREVLTTNP----RRLSII-A-------ESIRDGLATWDN-WKHVNCDKLTTII-- 359

Query: 286 VYGMCTSSDNETVTCNCIPGYTPLNPSDVSEGCHPETVVNYCAETSSKNFTVEVMDDAGF 345
                                  L P++  +         +         +V        
Sbjct: 360 --ESS---------------LNVLEPAEYRK--------MF------DRLSV-------- 380

Query: 346 LFDNFAD-----LARV-SNVDVEGCRKAVMDDCYSLGASLVGSTCVKTRMPLLNARKSAS 399
            F   A      L+ +  +V        V++  +                 L+  +   S
Sbjct: 381 -FPPSAHIPTILLSLIWFDVIKSDVMV-VVNKLHKYS--------------LVEKQPKES 424

Query: 400 TKGMKAI-IKVPTKMSN-PSNH-------EGKKKNNFNSRLLLKI-GFIFSAICALLSGV 449
           T  + +I +++  K+ N  + H          K  + +  +   +  + +S I     G 
Sbjct: 425 TISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI-----G- 478

Query: 450 AAIYYSPAARGLIKRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGIL 509
              ++      L    +        + F +F F  L+       K+    ++      IL
Sbjct: 479 ---HH------LKNIEHPERMTLFRMVFLDFRF--LE------QKIRHDSTAWNASGSIL 521

Query: 510 R-LKDTQIEIAVKKLEK---DIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV 565
             L+       +K  +    D +   E  +  +        +NL+        +   LL 
Sbjct: 522 NTLQQ------LKFYKPYICDNDPKYERLVNAILDFLPKIEENLIC------SKYTDLLR 569

Query: 566 YELMPNGTLSNFLFHEGQRPGWVQR 590
             LM        +F E  +   VQR
Sbjct: 570 IALMAE---DEAIFEEAHKQ--VQR 589

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 62.0 bits (151), Expect = 2e-10
 Identities = 49/239 (20%), Positives = 92/239 (38%), Gaps = 63/239 (26%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR-----THHKN 548
           + +G G+ G+V        D +   AVK + ++I+K       E  I+ +      ++ N
Sbjct: 41  RKMGDGTFGRVLLCQHI--DNKKYYAVKVV-RNIKKYTRSAKIEADILKKIQNDDINNNN 97

Query: 549 LVRLLGF-------CSEEDKRLLVYELM-PNGTLSNFLFHEGQRPGWVQRV-EIALGVAR 599
           +V+  G        C       L++E + P+  L   +         ++ +    + + +
Sbjct: 98  IVKYHGKFMYYDHMC-------LIFEPLGPS--LYEIITRNNYNGFHIEDIKLYCIEILK 148

Query: 600 GLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMA--------------------KISD 639
            L YL +     + H D+KP+N+LLD    + + +                     K+ D
Sbjct: 149 ALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLID 205

Query: 640 FGISKLLNKD-----QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
           FG +   +        TR          Y APE + N+      D++SFG +L E+  G
Sbjct: 206 FGCATFKSDYHGSIINTRQ---------YRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 61.9 bits (151), Expect = 3e-10
 Identities = 49/234 (20%), Positives = 94/234 (40%), Gaps = 57/234 (24%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKII------GRTHHK 547
             +G G+ GKV   I   K     +AVK + K++++  E   +E++++            
Sbjct: 20  DTLGEGAFGKVVECI-DHKAGGRHVAVKIV-KNVDRYCEAARSEIQVLEHLNTTDPNSTF 77

Query: 548 NLVRLLGF-------CSEEDKRLLVYELM-PNGTLSNFLFHEGQRPGWVQRV-EIALGVA 598
             V++L +       C       +V+EL+  +    +F+   G  P  +  + ++A  + 
Sbjct: 78  RCVQMLEWFEHHGHIC-------IVFELLGLS--TYDFIKENGFLPFRLDHIRKMAYQIC 128

Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMA--------------KISDFGISK 644
           + + +LH     ++ H D+KP+N+L         Y                K+ DFG + 
Sbjct: 129 KSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT 185

Query: 645 LLNKD-----QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG 693
             ++       TR          Y APE +  +  +   DV+S G +L+E   G
Sbjct: 186 YDDEHHSTLVSTRH---------YRAPEVILALGWSQPCDVWSIGCILIEYYLG 230

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109

 Score = 56.4 bits (136), Expect = 5e-10
 Identities = 20/113 (17%), Positives = 36/113 (31%), Gaps = 31/113 (27%)

Query: 90  KITLTNDGKLLLTYFNGSVQQIYSGAASLALMQNDGNFVLKNANSAVVWDSFDFPTDTIL 149
            + + +D  L+L   N       +G      + + G  V+KN + + VW           
Sbjct: 24  DLVMQDDCNLVLYNGNWQSNTANNGRDCKLTLTDYGELVIKNGDGSTVWK---------- 73

Query: 150 PGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGT 202
                       S ++       GNY   +  DG LV+  +    P  +    
Sbjct: 74  ------------SGAQS----VKGNYAAVVHPDGRLVV--F---GPSVFKIDP 105

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109

 Score = 46.8 bits (111), Expect = 1e-06
 Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 21/113 (18%)

Query: 143 FPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGT 202
             T+ +L GQ L T   L            G++ L MQ D NLVL  Y+    G W + T
Sbjct: 1   LGTNYLLSGQTLDTEGHL----------KNGDFDLVMQDDCNLVL--YN----GNWQSNT 44

Query: 203 VTLN-NVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNF 254
                +  L       + + N  G  +++        +    + A +   G  
Sbjct: 45  ANNGRDCKLTLTDYGELVIKNGDGSTVWKSG----AQSVKGNYAAVVHPDGRL 93

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109

 Score = 55.6 bits (134), Expect = 8e-10
 Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 13/100 (13%)

Query: 109 QQIYSGAASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTA 168
           + + +G     +MQ D N VL + +  + W +     D      +   G  +  + R   
Sbjct: 14  EFLNNGRYVF-IMQEDCNLVLYDVDKPI-WATNTGGLDRRCHLSMQSDGNLVVYSPRNNP 71

Query: 169 DYST------GNYTLEMQADGNLVLSAYHFADPGYWYTGT 202
            +++      GNY   +Q D N+V+  Y       W TGT
Sbjct: 72  IWASNTGGENGNYVCVLQKDRNVVI--Y---GTARWATGT 106

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109

 Score = 46.8 bits (111), Expect = 1e-06
 Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 18/110 (16%)

Query: 146 DTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTL 205
           + +  G+ L  G+ L          + G Y   MQ D NLVL  Y    P  W T T  L
Sbjct: 2   NILYSGETLSPGEFL----------NNGRYVFIMQEDCNLVL--YDVDKP-IWATNTGGL 48

Query: 206 N-NVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNF 254
           +    L       + + +   + I+       T  E+  +   +    N 
Sbjct: 49  DRRCHLSMQSDGNLVVYSPRNNPIWASN----TGGENGNYVCVLQKDRNV 94

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110

 Score = 55.6 bits (134), Expect = 1e-09
 Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 34/116 (29%)

Query: 90  KITLTNDGKLLLTYFNG---SVQQIYSGAASLALMQNDGNFVLKNANSAVVWDSFDFPTD 146
           ++ +  D   +L        +      G+     + N+GN V+ + ++ V+W +      
Sbjct: 23  RLIMQGDCNFVLYDSGKPVWASNTGGLGSGCRLTLHNNGNLVIYDQSNRVIWQT------ 76

Query: 147 TILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGT 202
                               T      +Y L +Q D N+V+       P  W TG+
Sbjct: 77  -------------------KTNG-KEDHYVLVLQQDRNVVIY-----GPVVWATGS 107

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110

 Score = 48.6 bits (116), Expect = 3e-07
 Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 13/84 (15%)

Query: 146 DTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTL 205
           +++     L TG  L             +Y L MQ D N VL          W + T  L
Sbjct: 2   NSLSSPNSLFTGHSLEVG---------PSYRLIMQGDCNFVLYDSGKP---VWASNTGGL 49

Query: 206 -NNVSLIFNQSAFMYLINSTGDNI 228
            +   L  + +  + + + +   I
Sbjct: 50  GSGCRLTLHNNGNLVIYDQSNRVI 73

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112

 Score = 54.6 bits (131), Expect = 2e-09
 Identities = 24/124 (19%), Positives = 37/124 (29%), Gaps = 21/124 (16%)

Query: 145 TDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVT 204
           +D +  G  L TG  L            G Y   +Q D NLVL  Y   +   W +GT  
Sbjct: 1   SDRLNSGHQLDTGGSLAE----------GGYLFIIQNDCNLVL--YDN-NRAVWASGTNG 47

Query: 205 LN-NVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQQFAYHKST 263
                 L       + + + +       T           +   +    N     Y  S 
Sbjct: 48  KASGCVLKMQNDGNLVIYSGSRAIWASNTNRQNGN-----YYLILQRDRNVVI--YDNSN 100

Query: 264 SSRW 267
           ++ W
Sbjct: 101 NAIW 104

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112

 Score = 41.8 bits (98), Expect = 7e-05
 Identities = 13/67 (19%), Positives = 31/67 (46%), Gaps = 4/67 (5%)

Query: 77  WAADRDSPAEAGSKITLTNDGKLLLTYFNGSV---QQIYSGAASLALMQNDGNFVLKNAN 133
           WA+  +  A +G  + + NDG L++   + ++              ++Q D N V+ + +
Sbjct: 41  WASGTNGKA-SGCVLKMQNDGNLVIYSGSRAIWASNTNRQNGNYYLILQRDRNVVIYDNS 99

Query: 134 SAVVWDS 140
           +  +W +
Sbjct: 100 NNAIWAT 106

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110

 Score = 54.1 bits (130), Expect = 3e-09
 Identities = 20/116 (17%), Positives = 36/116 (31%), Gaps = 33/116 (28%)

Query: 89  SKITLTNDGKLLLTYFNGSVQQ--IYSGAASLALMQNDGNFVLKNANSAVVWDSFDFPTD 146
            ++ +  D  L+L       Q     +G      + + G  ++K+ +   +W        
Sbjct: 26  HQLVMQGDCNLVLYGGKYGWQSNTHGNGEHCFLRLNHKGELIIKDDDFKTIW-------- 77

Query: 147 TILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGT 202
                          S S        G Y L +Q DG  V+  Y    P  + T +
Sbjct: 78  --------------SSRSSS----KQGEYVLILQDDGFGVI--Y---GPAIFETSS 110

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110

 Score = 47.9 bits (114), Expect = 4e-07
 Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 15/90 (16%)

Query: 140 SFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWY 199
           +  F  + +  GQVL    +L +           N+ L MQ D NLVL    +     W 
Sbjct: 1   NIPFTNNLLFSGQVLYGDGRLTA----------KNHQLVMQGDCNLVLYGGKY----GWQ 46

Query: 200 TGTVTLN-NVSLIFNQSAFMYLINSTGDNI 228
           + T     +  L  N    + + +     I
Sbjct: 47  SNTHGNGEHCFLRLNHKGELIIKDDDFKTI 76

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109

 Score = 53.7 bits (129), Expect = 4e-09
 Identities = 31/125 (24%), Positives = 45/125 (36%), Gaps = 35/125 (28%)

Query: 82  DSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSG----AASLALMQNDGNFVLKNANSAVV 137
            S         +  D  L+L   + SV    +G        A++Q+DGNFV+ +A    +
Sbjct: 14  QSLDVEPYHFIMQEDCNLVLYDHSTSVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSL 73

Query: 138 WDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGY 197
           W S                           +    GNY L +Q DGN+V+  Y       
Sbjct: 74  WASH--------------------------SVRGNGNYVLVLQEDGNVVI--Y---GSDI 102

Query: 198 WYTGT 202
           W TGT
Sbjct: 103 WSTGT 107

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109

 Score = 50.2 bits (120), Expect = 9e-08
 Identities = 18/111 (16%), Positives = 35/111 (31%), Gaps = 19/111 (17%)

Query: 146 DTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTL 205
           + +  G+ L  G+ L              Y   MQ D NLVL   +      W + T  L
Sbjct: 2   NLLTNGEGLYAGQSLDV----------EPYHFIMQEDCNLVL---YDHSTSVWASNTGIL 48

Query: 206 --NNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNF 254
                  +        + ++ G +++       +   +  +   +   GN 
Sbjct: 49  GKKGCKAVLQSDGNFVVYDAEGRSLWAS----HSVRGNGNYVLVLQEDGNV 95

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109

 Score = 42.5 bits (100), Expect = 4e-05
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 7/75 (9%)

Query: 73  KTLVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSVQ---QIYSGAASLAL-MQNDGNFV 128
            T VWA++     + G K  L +DG  ++    G          G  +  L +Q DGN V
Sbjct: 37  STSVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVV 96

Query: 129 LKNANSAVVWDSFDF 143
           +  ++   +W +  +
Sbjct: 97  IYGSD---IWSTGTY 108

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113

 Score = 52.9 bits (127), Expect = 1e-08
 Identities = 18/119 (15%), Positives = 33/119 (27%), Gaps = 38/119 (31%)

Query: 90  KITLTNDGKLLLTYFNGSVQQIYS------GAASLALMQNDGNFVLKNANSAVVWDSFDF 143
            + + +D  L+L         ++       G      + + G   + +     V+ S   
Sbjct: 27  SLVMRDDCNLVL-TKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNTVFVS--- 82

Query: 144 PTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGT 202
                                  T     G+Y L +Q +G  V+  Y    P  W T  
Sbjct: 83  ----------------------NT-VGQEGDYVLILQINGQAVV--Y---GPAVWSTAA 113

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113

 Score = 50.2 bits (120), Expect = 8e-08
 Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 12/87 (13%)

Query: 143 FPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGT 202
              + +   QV+    +L +           +Y+L M+ D NLVL+     +   W +GT
Sbjct: 4   RVRNVLFSSQVMYDNAQLAT----------RDYSLVMRDDCNLVLTKGSKTNI-VWESGT 52

Query: 203 VTL-NNVSLIFNQSAFMYLINSTGDNI 228
                +  +    S  + + +   + +
Sbjct: 53  SGRGQHCFMRLGHSGELDITDDRLNTV 79

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 54.7 bits (132), Expect = 5e-08
 Identities = 44/213 (20%), Positives = 86/213 (40%), Gaps = 25/213 (11%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE---FMTELKIIGRTHH-KNL 549
           K +G G+ G++  G      T   +A+K     +E           E +   +      +
Sbjct: 15  KKIGCGNFGELRLGKN--LYTNEYVAIK-----LEPMKSRAPQLHLEYRFYKQLGSGDGI 67

Query: 550 VRLLGFCSEEDKRLLVYELM-PNGTLSNFLFHEGQRPGWVQRV-EIALGVARGLLYLHEE 607
            ++  F        +V EL+ P+  L + LF    R   ++ V  IA+ +   + Y+H +
Sbjct: 68  PQVYYFGPCGKYNAMVLELLGPS--LED-LFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 124

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT------RTDTNMRGTM 661
               +I+ D+KP+N L+      T  +  I DF ++K     +T      R   ++ GT 
Sbjct: 125 N---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTA 181

Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
            Y++         + + D+ + G M +  + G 
Sbjct: 182 RYMSINTHLGKEQSRRDDLEALGHMFMYFLRGS 214

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115

 Score = 50.7 bits (121), Expect = 7e-08
 Identities = 22/106 (20%), Positives = 33/106 (31%), Gaps = 13/106 (12%)

Query: 109 QQIYSGAASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTA 168
             + +GA +L  +QN  N V       + W S      +     +L  G  +  +     
Sbjct: 15  HSLQAGAYTLT-IQNKCNLVKYQNGRQI-WASNTDRRGSGCRLTLLSDGNLVIYDHNNND 72

Query: 169 ------DYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTLNNV 208
                     G Y L +Q DG  V+       P  W  G      V
Sbjct: 73  VWGSACWGDNGKYALVLQKDGRFVIY-----GPVLWSLGPNGCRRV 113

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115

 Score = 50.3 bits (120), Expect = 1e-07
 Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 18/110 (16%)

Query: 146 DTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTL 205
           + +L GQ L     L +          G YTL +Q   NLV           W + T   
Sbjct: 3   NVLLSGQTLHADHSLQA----------GAYTLTIQNKCNLVKYQNGRQ---IWASNTDRR 49

Query: 206 N-NVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNF 254
                L       + + +   ++++          ++  +   +   G F
Sbjct: 50  GSGCRLTLLSDGNLVIYDHNNNDVWG----SACWGDNGKYALVLQKDGRF 95

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 53.3 bits (127), Expect = 1e-07
 Identities = 34/218 (15%), Positives = 55/218 (25%), Gaps = 61/218 (27%)

Query: 480 FTFQELQEATKGFSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKL--------EKDIEK 529
             F      T+   +   +G G  G+V++ I         +A+K +            +K
Sbjct: 11  VPFSHCL-PTEKLQRCEKIGEGVFGEVFQTI----ADHTPVAIKIIAIEGPDLVNGSHQK 65

Query: 530 TNEEFMTE---------LKIIGRTHHKNLVRLLGFC------------------------ 556
           T EE + E         L        +  + L                            
Sbjct: 66  TFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSA 125

Query: 557 ------SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
                  ++D+  +V E    G          +         I   +   L         
Sbjct: 126 NDRPDFFKDDQLFIVLEFEFGGID--LEQMRTKLSSLATAKSILHQLTASLAVAEASL-- 181

Query: 611 QIIHCDIKPQNVLLD---LKTLDTNYMAKISDFGISKL 645
           +  H D+   NVLL    LK L      K S      L
Sbjct: 182 RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGL 219

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236

 Score = 50.3 bits (119), Expect = 7e-07
 Identities = 23/139 (16%), Positives = 41/139 (29%), Gaps = 34/139 (24%)

Query: 66  WFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQ---IYSGAASLALMQ 122
           +  +  +          S   +  ++++  D  L+L   +  V        G    A++Q
Sbjct: 129 YSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDRDDRVWSTNTAGKGTGCRAVLQ 188

Query: 123 NDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQAD 182
            +G   +    +  VW S +                            S G Y   +Q D
Sbjct: 189 PNGRMDVLTNQNIAVWTSGN--------------------------SRSAGRYVFVLQPD 222

Query: 183 GNLVLSAYHFADPGYWYTG 201
            NL +  Y       W TG
Sbjct: 223 RNLAI--Y---GGALWTTG 236

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236

 Score = 47.6 bits (112), Expect = 4e-06
 Identities = 16/164 (9%), Positives = 35/164 (21%), Gaps = 17/164 (10%)

Query: 144 PTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTV 203
            +      Q L   + L             ++   MQ+D NLVL  +       W + T 
Sbjct: 7   LSHEGSHPQTLHAAQSLEL----------SSFRFTMQSDCNLVL--FDSDVR-VWASNTA 53

Query: 204 TLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQQFAYHKST 263
                  +      + ++ +     +       T      +   +        +      
Sbjct: 54  GATGCRAVLQSDGLLVILTAQNTIRWS----SGTKGSIGNYVLVLQPDRTVTIYGPGLWD 109

Query: 264 SSRWTRVWRAVNDPCIVNCICGVYGMCTSSDNETVTCNCIPGYT 307
           S    +    V +                          +  Y 
Sbjct: 110 SGTSNKGSVVVANNGNSILYSTQGNDNHPQTLHATQSLQLSPYR 153

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236

 Score = 45.3 bits (106), Expect = 3e-05
 Identities = 35/190 (18%), Positives = 58/190 (30%), Gaps = 34/190 (17%)

Query: 65  IWFDKIPEKTLVWAADRDSPAEAGS-KITLTNDGKLLLTYFNGSV--QQIYSGAASLALM 121
           I F    E +           E  S + T+ +D  L+L   +  V            A++
Sbjct: 3   ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFDSDVRVWASNTAGATGCRAVL 62

Query: 122 QNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQA 181
           Q+DG  V+  A + + W S                              S GNY L +Q 
Sbjct: 63  QSDGLLVILTAQNTIRWSS--------------------------GTKGSIGNYVLVLQP 96

Query: 182 DGNLVLSAYHFADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTED 241
           D  + +      D G    G+V + N     N ++ +Y      ++   L          
Sbjct: 97  DRTVTIYGPGLWDSGTSNKGSVVVAN-----NGNSILYSTQGNDNHPQTLHATQSLQLSP 151

Query: 242 YYHRATIDGH 251
           Y      D +
Sbjct: 152 YRLSMETDCN 161

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 51.3 bits (123), Expect = 7e-07
 Identities = 26/175 (14%), Positives = 56/175 (32%), Gaps = 37/175 (21%)

Query: 494 KLVGTGSSGKVYRGI------LRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHK 547
                 + G +Y               + + ++K     ++  +     E     R    
Sbjct: 48  SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLK-----LDAKDGRLFNEQNFFQRAAKP 102

Query: 548 NLV---------------RLLGFCSEEDK-RLLVYELM-PNGTLSNFLFHEGQRPGWVQR 590
             V                 +GF   +DK R LV   +  +  L + L    +     + 
Sbjct: 103 LQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRS--LQSALDVSPKHVLSERS 160

Query: 591 V-EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK 644
           V ++A  +   L +LHE      +H ++  +N+ +D +      +A    +G + 
Sbjct: 161 VLQVACRLLDALEFLHENE---YVHGNVTAENIFVDPEDQSQVTLA---GYGFAF 209

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 49.3 bits (118), Expect = 2e-06
 Identities = 43/213 (20%), Positives = 80/213 (37%), Gaps = 25/213 (11%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT---ELKIIGRTHHKNLV 550
           + +G GS G ++ G         ++A+K      E    +      E +          +
Sbjct: 16  RRIGEGSFGVIFEGTN--LLNNQQVAIKF-----EPRRSDAPQLRDEYRTYKLLAGCTGI 68

Query: 551 -RLLGFCSEEDKRLLVYELM-PNGTLSNFLFHEGQRPGWVQRV-EIALGVARGLLYLHEE 607
             +  F  E    +LV +L+ P+  L + L     R   V+ V   A  +   +  +HE+
Sbjct: 69  PNVYYFGQEGLHNVLVIDLLGPS--LED-LLDLCGRKFSVKTVAMAAKQMLARVQSIHEK 125

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT------RTDTNMRGTM 661
               +++ DIKP N L+         M  + DFG+ K      T      R   N+ GT 
Sbjct: 126 S---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTA 182

Query: 662 GYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
            Y++         + + D+ + G + +  + G 
Sbjct: 183 RYMSINTHLGREQSRRDDLEALGHVFMYFLRGS 215

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111

 Score = 44.8 bits (106), Expect = 7e-06
 Identities = 20/117 (17%), Positives = 30/117 (25%), Gaps = 34/117 (29%)

Query: 90  KITLTNDGKLLLTYFNGSV---QQIYSGAASLALMQNDGNFVLKNANS-AVVWDSFDFPT 145
              +  D  L+L Y             G      + N G   + +ANS   VW       
Sbjct: 23  AFVMQGDCNLVL-YNEAGGFQSNTHGRGVDCTLRLNNRGQLEIHSANSNTPVWVY----- 76

Query: 146 DTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGT 202
                            +         GNY   +  D ++ +  Y    P  W T  
Sbjct: 77  ---------------PRSVNT----VRGNYAATLGPDQHVTI--Y---GPAIWSTPA 109

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 10/103 (9%)

Query: 153 VLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTLN-NVSLI 211
           VLLTG  ++++++     S  +    MQ D NLVL    + + G + + T     + +L 
Sbjct: 4   VLLTGDVIHTDNQ----LSYESAAFVMQGDCNLVL----YNEAGGFQSNTHGRGVDCTLR 55

Query: 212 FNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNF 254
            N    + + ++  +    +       T    + AT+    + 
Sbjct: 56  LNNRGQLEIHSANSNTPVWVYPR-SVNTVRGNYAATLGPDQHV 97

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 47.8 bits (114), Expect = 9e-06
 Identities = 50/239 (20%), Positives = 82/239 (34%), Gaps = 62/239 (25%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKI---------IGRT 544
           K +G+G  G +Y      K  +    V K+E    + N    +ELK          I + 
Sbjct: 43  KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEY---QENGPLFSELKFYQRVAKKDCIKKW 99

Query: 545 HHKNLVRLLGF----------CSEEDKRLLVYELM---------PNGTLSNFLFHEGQRP 585
             +  +  LG                 R +V E +          NGT            
Sbjct: 100 IERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFK---------- 149

Query: 586 GWVQRVEIALGVARGLL----YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG 641
                    L +   +L    Y+HE      +H DIK  N+LL  K  D  Y+A   D+G
Sbjct: 150 -----KSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQVYLA---DYG 198

Query: 642 ISKLLNKDQT------RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           +S     +               GT+ + + +  + V ++ + DV   G  +L  +CG+
Sbjct: 199 LSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGK 257

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 47.5 bits (113), Expect = 9e-06
 Identities = 39/231 (16%), Positives = 78/231 (33%), Gaps = 43/231 (18%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKI---------IGRT 544
             +G G  G +Y          +      + K     N    TELK          I + 
Sbjct: 41  LPIGQGGFGCIYLAD-MNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKW 99

Query: 545 HHKNLVRLLGFCS----------EEDKRLLVYELM-PNGTLSNFLFHEGQRPGWVQRVEI 593
                ++ LG              +  R ++ +    +  L   ++    +    + V  
Sbjct: 100 IRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSD--LQK-IYEANAKRFSRKTV-- 154

Query: 594 ALGVARGLL----YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
            L ++  +L    Y+HE      +H DIK  N+LL+ K  D  Y+    D+G++     +
Sbjct: 155 -LQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYKNPDQVYLV---DYGLAYRYCPE 207

Query: 650 QT------RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
                          GT+ + + +    V  + + D+   G  +++ + G 
Sbjct: 208 GVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGH 258

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 47.7 bits (113), Expect = 1e-05
 Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 31/215 (14%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT---E---LKIIGRTHHK 547
           + +G+GS G++Y G      T  E+A+K     +E    +      E    +I+      
Sbjct: 13  RKIGSGSFGEIYLGTN--IQTNEEVAIK-----LENVKTKHPQLLYESKIYRILQGGTG- 64

Query: 548 NLVRLLGFCSEEDKRLLVYELM-PNGTLSNFLFHEGQRPGWVQRV-EIALGVARGLLYLH 605
            +  +  F  E D  +LV +L+ P+  L + LF+   R   ++ V  +A  +   + ++H
Sbjct: 65  -IPNVRWFGVEGDYNVLVMDLLGPS--LED-LFNFCSRKLSLKTVLMLADQMINRVEFVH 120

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT------RTDTNMRG 659
            +     +H DIKP N L+ L          I DFG++K      T      R + N+ G
Sbjct: 121 SKS---FLHRDIKPDNFLMGLG--RRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTG 175

Query: 660 TMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           T  Y +      +  + + D+ S G +L+  + G 
Sbjct: 176 TARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGS 210

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 47.4 bits (113), Expect = 1e-05
 Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 31/215 (14%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMT---E---LKIIGRTHHK 547
           + +G+GS G +Y G         E+A+K     +E    +      E    K++      
Sbjct: 15  RKIGSGSFGDIYLGTD--IAAGEEVAIK-----LECVKTKHPQLHIESKIYKMMQGGVG- 66

Query: 548 NLVRLLGFCSEEDKRLLVYELM-PNGTLSNFLFHEGQRPGWVQRV-EIALGVARGLLYLH 605
            +  +    +E D  ++V EL+ P+  L + LF+   R   ++ V  +A  +   + Y+H
Sbjct: 67  -IPTIRWCGAEGDYNVMVMELLGPS--LED-LFNFCSRKFSLKTVLLLADQMISRIEYIH 122

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT------RTDTNMRG 659
                  IH D+KP N L+ L       +  I DFG++K     +T      R + N+ G
Sbjct: 123 S---KNFIHRDVKPDNFLMGLG--KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTG 177

Query: 660 TMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           T  Y +      +  + + D+ S G +L+    G 
Sbjct: 178 TARYASINTHLGIEQSRRDDLESLGYVLMYFNLGS 212

>2vse_A MTX holotoxin, mosquitocidal toxin; ADP-ribosyltransferase, lectin, ricin-B-like domain; 2.5A {Lysinibacillus sphaericus} PDB: 2vsa_A Length = 841

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 28/226 (12%), Positives = 62/226 (27%), Gaps = 25/226 (11%)

Query: 76  VWAADRDSPAEAGSKITLTNDGKLLLTYFNGSVQQIYSGAASLALMQNDGNFVLKNANSA 135
              ++ ++    G  + L  +    +   NG +        +   +  +  + +KN    
Sbjct: 222 ENHSEGNNMDSKGFILDLDYNQDFDMFAPNGEIPNNNLLNNNSLNVIQNSEYQIKNKKDR 281

Query: 136 VVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTA-------DYSTGNYTLEMQADGNLVLS 188
            +  + D        G  +    + Y N            D     Y +  +    L+LS
Sbjct: 282 NIVVTLDSDYG----GSPV----ESYKNFGFENQKWNIKYDSKKNAYKIYNRETPTLLLS 333

Query: 189 AYHFADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTE--DYYHRA 246
               +  G      +     S   NQ    + I    +  ++  RN+  P++  D     
Sbjct: 334 WNSNSSNG---EQVIRGYTESGSNNQ---YWTIEKNVNGFYKF-RNLSDPSKILDLKDGN 386

Query: 247 TIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPCIVNCICGVYGMCTS 292
           T++        + + S+S  W                         
Sbjct: 387 TLNK-TPLVVSSENSSSSQEWLIEKTNYQTVKDGTYQVSSKLNENK 431

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	788
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.98
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	99.97
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.94
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.9
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.81
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	99.73
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	99.71
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.71
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	99.67
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	99.66
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.65
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.52
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.51
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	99.4
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	99.38
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.35
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.34
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	99.33
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	99.22
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	99.22
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.09
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	98.99
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	98.9
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	98.9
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.85
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	98.8
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.78
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	98.71
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.63
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	98.61
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	98.38
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	98.37
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.24
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	98.22
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.1
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.07
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.01
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.85
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.83
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.56
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.38
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.07
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.0
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.85
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	96.44
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	96.41
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	96.41
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	96.23
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	96.13
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	95.74
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	95.7
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	95.66
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	95.62
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	94.81
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	94.26
3mes_A	424	Choline kinase; malaria, structural genomics, stru	92.51
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	83.92
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	83.62
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	81.76

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.1e-51  Score=435.46  Aligned_cols=262  Identities=25%  Similarity=0.428  Sum_probs=213.5

Q ss_pred             HHHhhcccccccccccceEEEEEEec---cCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      ....+.+.++||+|+||+||+|.+..   ..++..||||+++.......++|.+|+++|++++|||||+++|+|.+++..
T Consensus        11 ~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~   90 (299)
T 4asz_A           11 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL   90 (299)
T ss_dssp             CGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred             CHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence            34456678999999999999998752   235678999999877777788999999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhcc------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCC
Q 047157          563 LLVYELMPNGTLSNFLFHE------------GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD  630 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~------------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~  630 (788)
                      +||||||++|+|.++|...            ...+++.+++.|+.||++||.|||++   +|+||||||+|||++     
T Consensus        91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~-----  162 (299)
T 4asz_A           91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVG-----  162 (299)
T ss_dssp             EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC-----
T ss_pred             EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEEC-----
Confidence            9999999999999999653            24689999999999999999999999   999999999999998     


Q ss_pred             CCCcEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCcccccccccc
Q 047157          631 TNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEE  708 (788)
Q Consensus       631 ~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~  708 (788)
                      .++.+||+|||+++........ ......||+.|||||++.+..++.++|||||||+||||+| |+.||......+    
T Consensus       163 ~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~----  238 (299)
T 4asz_A          163 ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE----  238 (299)
T ss_dssp             GGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH----
T ss_pred             CCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH----
Confidence            8889999999999876443322 2233568999999999999999999999999999999998 899997643221    


Q ss_pred             chhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          709 VDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       709 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                              +...+..+....    .     +...++++.+|+.+||+.||++|||++||++.|+++..
T Consensus       239 --------~~~~i~~~~~~~----~-----p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~  289 (299)
T 4asz_A          239 --------VIECITQGRVLQ----R-----PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK  289 (299)
T ss_dssp             --------HHHHHHHTCCCC----C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --------HHHHHHcCCCCC----C-----CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence                    111111221111    1     11234578899999999999999999999999987653

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=3.6e-51  Score=437.40  Aligned_cols=260  Identities=27%  Similarity=0.426  Sum_probs=207.0

Q ss_pred             hhcccccccccccceEEEEEEec---cCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ...+.++||+|+||+||+|.++.   ..++..||||+++.......++|.+|+++|++++|||||+++++|.+.+..+||
T Consensus        42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV  121 (329)
T 4aoj_A           42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV  121 (329)
T ss_dssp             GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            44567899999999999998752   235678999999877777788999999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccC--------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCC
Q 047157          566 YELMPNGTLSNFLFHEG--------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDT  631 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~  631 (788)
                      ||||++|+|.+++.+..              ..+++.+++.|+.||++||+|||++   +||||||||+||||+     .
T Consensus       122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~-----~  193 (329)
T 4aoj_A          122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVG-----Q  193 (329)
T ss_dssp             EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE-----T
T ss_pred             EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEEC-----C
Confidence            99999999999996542              3589999999999999999999998   999999999999999     8


Q ss_pred             CCcEEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccc
Q 047157          632 NYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEV  709 (788)
Q Consensus       632 ~~~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~  709 (788)
                      ++.+||+|||+++....... .......||+.|||||++.+..++.++|||||||+||||+| |+.||......+.    
T Consensus       194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~----  269 (329)
T 4aoj_A          194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA----  269 (329)
T ss_dssp             TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH----
T ss_pred             CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH----
Confidence            89999999999987644332 23344679999999999999999999999999999999999 8999976432211    


Q ss_pred             hhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCC
Q 047157          710 DIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEV  777 (788)
Q Consensus       710 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~  777 (788)
                              ...+..+.       .+.  .+...++++.+|+.+||+.||++||||+||+++|+.+.+.
T Consensus       270 --------~~~i~~g~-------~~~--~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          270 --------IDCITQGR-------ELE--RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             --------HHHHHHTC-------CCC--CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             --------HHHHHcCC-------CCC--CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence                    11111111       011  1112346788999999999999999999999999987653

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=2.7e-51  Score=434.31  Aligned_cols=264  Identities=23%  Similarity=0.334  Sum_probs=213.1

Q ss_pred             HHHHHHhhcccccccccccceEEEEEEec---cCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEec
Q 047157          483 QELQEATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSE  558 (788)
Q Consensus       483 ~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~  558 (788)
                      .|+...+.+|.++||+|+||+||+|.+..   ...++.||||+++... ....++|.+|+.++++++|||||+++|+|.+
T Consensus        21 ~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~  100 (308)
T 4gt4_A           21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK  100 (308)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE
Confidence            34445567889999999999999998742   2356789999996543 3446789999999999999999999999999


Q ss_pred             CCeEEEEEecCCCCCHhHhhhccC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEE
Q 047157          559 EDKRLLVYELMPNGTLSNFLFHEG---------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVL  623 (788)
Q Consensus       559 ~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIl  623 (788)
                      ++..+||||||++|+|.++|....               ..+++..++.|+.|||+||.|||++   +||||||||+|||
T Consensus       101 ~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NIL  177 (308)
T 4gt4_A          101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVL  177 (308)
T ss_dssp             SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceE
Confidence            999999999999999999996432               3578999999999999999999999   9999999999999


Q ss_pred             eccCCCCCCCcEEEeecCCccccCCCC-CcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccc
Q 047157          624 LDLKTLDTNYMAKISDFGISKLLNKDQ-TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSR  701 (788)
Q Consensus       624 l~~~~~~~~~~~kL~Dfg~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~  701 (788)
                      |+     +++.+||+|||+++...... ........||+.|||||++.+..++.++|||||||+||||+| |+.||....
T Consensus       178 l~-----~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~  252 (308)
T 4gt4_A          178 VY-----DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS  252 (308)
T ss_dssp             EC-----GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC
T ss_pred             EC-----CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC
Confidence            99     88899999999998764332 223345679999999999999999999999999999999998 899997653


Q ss_pred             cccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          702 VEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ..+            +...+..+....         .+...+..+.+|+.+||+.||++||||+||+++|+...
T Consensus       253 ~~~------------~~~~i~~~~~~~---------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~  305 (308)
T 4gt4_A          253 NQD------------VVEMIRNRQVLP---------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG  305 (308)
T ss_dssp             HHH------------HHHHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             HHH------------HHHHHHcCCCCC---------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence            221            111122221111         11223467889999999999999999999999998754

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.9e-50  Score=425.82  Aligned_cols=264  Identities=24%  Similarity=0.381  Sum_probs=202.8

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeeccc--chHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK--DIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ...+.++||+|+||+||+|++.   .  .||||.++.  ......+.|.+|++++++++|||||++++++.+ +..+|||
T Consensus        37 ~l~l~~~iG~G~fG~Vy~~~~~---~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm  110 (307)
T 3omv_A           37 EVMLSTRIGSGSFGTVYKGKWH---G--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT  110 (307)
T ss_dssp             SCCEEEECCCCSSSEEEEEESS---S--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             HeEEeeEEeeCCCcEEEEEEEC---C--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence            3456789999999999999763   2  588888753  234566789999999999999999999998865 5689999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      |||++|+|.++|......+++.++..|+.|||+||+|||++   +||||||||+||||+     .++.+||+|||+|+..
T Consensus       111 Ey~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~-----~~~~~Ki~DFGla~~~  182 (307)
T 3omv_A          111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLH-----EGLTVKIGDFGLATVK  182 (307)
T ss_dssp             ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEE-----TTEEEEECCCSSCBC-
T ss_pred             EcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEEC-----CCCcEEEeeccCceec
Confidence            99999999999987777899999999999999999999998   999999999999999     8899999999999876


Q ss_pred             CCCC-CcccccccCCccccCcccccC---CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          647 NKDQ-TRTDTNMRGTMGYVAPEWLRN---VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       647 ~~~~-~~~~~~~~gt~~y~aPE~~~~---~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      .... ........||+.|||||++.+   .+++.++|||||||+||||+||+.||........           ......
T Consensus       183 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-----------~~~~~~  251 (307)
T 3omv_A          183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-----------IIFMVG  251 (307)
T ss_dssp             -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-----------HHHHHH
T ss_pred             ccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-----------HHHHHh
Confidence            5432 223345689999999999863   4689999999999999999999999975422110           111111


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCCCCCCCC
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMPPLL  783 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~~~pp~p  783 (788)
                      .+...    +.+. ......++.+.+|+.+||+.||++||||.||+++|+.+. -+.|+.+
T Consensus       252 ~~~~~----p~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~-~~lpk~~  306 (307)
T 3omv_A          252 RGYAS----PDLS-KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ-HSLPKIN  306 (307)
T ss_dssp             TTCCC----CCST-TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH-TTCCC--
T ss_pred             cCCCC----CCcc-cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh-ccCCCCC
Confidence            11100    0000 011123467888999999999999999999999997653 3455543

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.5e-49  Score=424.16  Aligned_cols=249  Identities=24%  Similarity=0.337  Sum_probs=208.2

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      |.+.++||+|+||+||+|.++  .+++.||||++........+.+.+|+++|++++|||||++++++.+++..||||||+
T Consensus        76 y~~~~~iG~G~fG~V~~a~~~--~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           76 LDNFIKIGEGSTGIVCIATVR--SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             EEEEEEEEECSSCEEEEEEET--TTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cEEeEEeecCcCeEEEEEEEC--CCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            666789999999999999987  678899999997665555667899999999999999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++|+|.+++.+  ..+++..+..++.||+.||.|||++   +|+||||||+||||+     .++.+||+|||+++.+...
T Consensus       154 ~gg~L~~~l~~--~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~-----~~g~vKl~DFGla~~~~~~  223 (346)
T 4fih_A          154 EGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLT-----HDGRVKLSDFGFCAQVSKE  223 (346)
T ss_dssp             TTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----TTCCEEECCCTTCEECCSS
T ss_pred             CCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEC-----CCCCEEEecCcCceecCCC
Confidence            99999999965  4689999999999999999999999   999999999999998     8889999999999877544


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL  729 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  729 (788)
                      .. .....+||+.|||||++.+..|+.++|||||||++|||++|+.||......+.        .    ..+....    
T Consensus       224 ~~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~--------~----~~i~~~~----  286 (346)
T 4fih_A          224 VP-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--------M----KMIRDNL----  286 (346)
T ss_dssp             SC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--------H----HHHHHSS----
T ss_pred             CC-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH--------H----HHHHcCC----
Confidence            33 23457899999999999999999999999999999999999999975432211        0    1111110    


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       730 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                         .+.........+++.+|+.+||+.||++|||++|++++
T Consensus       287 ---~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          287 ---PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  324 (346)
T ss_dssp             ---CCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ---CCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence               11111122334678889999999999999999999874

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=6.7e-49  Score=419.83  Aligned_cols=249  Identities=21%  Similarity=0.291  Sum_probs=201.3

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .|.+.++||+|+||+||+|+++  .+++.||||++...  .....+.+.+|++++++++|||||++++++.+++..||||
T Consensus        25 ~Y~~~~~lG~G~fg~V~~a~~~--~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm  102 (350)
T 4b9d_A           25 KYVRLQKIGEGSFGKAILVKST--EDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM  102 (350)
T ss_dssp             CEEEEEEC------CEEEEEET--TTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ceEEeEEEecCCCeEEEEEEEC--CCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence            4777899999999999999887  67789999998643  2445678999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+++|+|.++|...+ ..+++.++..|+.||+.||.|||++   +|+||||||+||||+     .++.+||+|||+|+.
T Consensus       103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~-----~~g~vKl~DFGla~~  174 (350)
T 4b9d_A          103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLT-----KDGTVQLGDFGIARV  174 (350)
T ss_dssp             ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEEC-----TTCCEEECSTTEESC
T ss_pred             eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEEC-----CCCCEEEccccccee
Confidence            9999999999997553 4578999999999999999999999   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      +..... .....+||+.|||||++.+..|+.++|||||||+||||++|+.||...+..+.            ......+.
T Consensus       175 ~~~~~~-~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~------------~~~i~~~~  241 (350)
T 4b9d_A          175 LNSTVE-LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL------------VLKIISGS  241 (350)
T ss_dssp             CCHHHH-HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH------------HHHHHHTC
T ss_pred             ecCCcc-cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH------------HHHHHcCC
Confidence            643211 22346799999999999999999999999999999999999999976532211            11111111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ...+         ......++.+|+.+||+.||++|||++|+++
T Consensus       242 ~~~~---------~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          242 FPPV---------SLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             CCCC---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCC---------CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1111         1123456888999999999999999999986

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.8e-48  Score=407.87  Aligned_cols=247  Identities=24%  Similarity=0.342  Sum_probs=197.7

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEec----CCeEEE
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE----EDKRLL  564 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----~~~~~l  564 (788)
                      .+.++||+|+||+||+|.+.  .++..||+|.+...  .....+.|.+|++++++++|||||++++++.+    ++..+|
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~--~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l  106 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDT--ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEEC--CCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence            56678999999999999887  67789999998643  24456789999999999999999999999865    346899


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCc--eEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ--IIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      |||||++|+|.+++.+. ..+++..+..++.||+.||+|||++   +  |+||||||+||||+.    .++.+||+|||+
T Consensus       107 vmEy~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~----~~g~vKl~DFGl  178 (290)
T 3fpq_A          107 VTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITG----PTGSVKIGDLGL  178 (290)
T ss_dssp             EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESS----TTSCEEECCTTG
T ss_pred             EEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEEC----CCCCEEEEeCcC
Confidence            99999999999999654 5789999999999999999999998   6  999999999999971    367999999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      |+.....   .....+||+.|||||++.+ +++.++|||||||+||||+||+.||........           ......
T Consensus       179 a~~~~~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~-----------~~~~i~  243 (290)
T 3fpq_A          179 ATLKRAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-----------IYRRVT  243 (290)
T ss_dssp             GGGCCTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-----------HHHHHT
T ss_pred             CEeCCCC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH-----------HHHHHH
Confidence            9864332   2334689999999999875 699999999999999999999999964321110           111111


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .+.....        .+.....++.+|+.+||+.||++|||++|++++
T Consensus       244 ~~~~~~~--------~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H  283 (290)
T 3fpq_A          244 SGVKPAS--------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             TTCCCGG--------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             cCCCCCC--------CCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            1111100        011123467889999999999999999999863

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.3e-48  Score=415.72  Aligned_cols=250  Identities=24%  Similarity=0.213  Sum_probs=201.6

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      +.+.++||+|+||+||+|+++  .++..||||+++....     ..+|+.++++++|||||++++++.+++..||||||+
T Consensus        60 ~~~~~~lG~G~fG~Vy~a~~~--~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  132 (336)
T 4g3f_A           60 MTHQPRVGRGSFGEVHRMKDK--QTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL  132 (336)
T ss_dssp             EEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             eEeCcEeccCCCeEEEEEEEC--CCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence            456688999999999999987  6778999999975422     247999999999999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCC-cEEEeecCCccccCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNY-MAKISDFGISKLLNK  648 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~-~~kL~Dfg~a~~~~~  648 (788)
                      ++|+|.+++.+. ..+++..+..++.||+.||.|||++   +||||||||+||||+     .++ .+||+|||+|+.+..
T Consensus       133 ~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~-----~~g~~vKl~DFGla~~~~~  203 (336)
T 4g3f_A          133 EGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLS-----SDGSRAALCDFGHALCLQP  203 (336)
T ss_dssp             TTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEEC-----TTSCCEEECCCTTCEEC--
T ss_pred             CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEe-----CCCCEEEEeeCCCCeEccC
Confidence            999999999765 5689999999999999999999999   999999999999998     555 699999999997754


Q ss_pred             CCCc----ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          649 DQTR----TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       649 ~~~~----~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ....    .....+||+.|||||++.+..++.++|||||||++|||++|+.||......+...        .    +...
T Consensus       204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~--------~----i~~~  271 (336)
T 4g3f_A          204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL--------K----IASE  271 (336)
T ss_dssp             ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHH--------H----HHHS
T ss_pred             CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH--------H----HHcC
Confidence            3321    1233679999999999999999999999999999999999999997653322110        0    0111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      ... +      ..........+.+++.+||+.||++|||+.|+++.|...
T Consensus       272 ~~~-~------~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~  314 (336)
T 4g3f_A          272 PPP-I------REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA  314 (336)
T ss_dssp             CCG-G------GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCC-c------hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            000 0      001112345678899999999999999999999988654

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=6.6e-49  Score=412.94  Aligned_cols=247  Identities=22%  Similarity=0.295  Sum_probs=207.2

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.++||+|+||+||+|+.+  .+++.||||.+.+..   ....+.+.+|+++|++++|||||++++++++++..|||
T Consensus        33 dy~i~~~lG~G~fg~V~~a~~~--~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv  110 (311)
T 4aw0_A           33 DFKFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG  110 (311)
T ss_dssp             GEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccEEEEEEecccCeEEEEEEEC--CCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            4788899999999999999887  678899999997542   33456899999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++|+|.+++.+. ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+|+.
T Consensus       111 mEy~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~-----~~g~vKl~DFGla~~  181 (311)
T 4aw0_A          111 LSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLN-----EDMHIQITDFGTAKV  181 (311)
T ss_dssp             ECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----TTSCEEECCCTTCEE
T ss_pred             EecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEc-----CCCCEEEEEcCCcee
Confidence            9999999999999765 5689999999999999999999999   999999999999998     888999999999998


Q ss_pred             cCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      +..... ......+||+.|||||++.+..++.++||||+||++|||++|+.||...+..+.            ...+...
T Consensus       182 ~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~------------~~~i~~~  249 (311)
T 4aw0_A          182 LSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI------------FAKIIKL  249 (311)
T ss_dssp             CCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHHHT
T ss_pred             cCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH------------HHHHHcC
Confidence            754433 233457899999999999999999999999999999999999999976532211            1111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI  768 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl  768 (788)
                      ..        ...  ....+++.+|+.+||+.||++|||++|++
T Consensus       250 ~~--------~~p--~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          250 EY--------DFP--EKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             CC--------CCC--TTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             CC--------CCC--cccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence            11        110  11245678899999999999999999863

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=2.1e-48  Score=425.55  Aligned_cols=250  Identities=24%  Similarity=0.333  Sum_probs=208.2

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .|.+.++||+|+||+||+|.++  .+++.||||++........+.+.+|+++|++++|||||++++++.+++..||||||
T Consensus       152 ~y~~~~~iG~G~fG~V~~a~~~--~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          152 YLDNFIKIGEGSTGIVCIATVR--SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             TEEEEEEEEECSSCEEEEEEET--TTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hcEeeeEeccCcCcEEEEEEEC--CCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            3667789999999999999987  67889999999765555566789999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      |++|+|.+++..  ..+++.++..++.||+.||+|||++   +||||||||+||||+     .++.+||+|||+|+.+..
T Consensus       230 ~~gG~L~~~i~~--~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~-----~~g~vKl~DFGla~~~~~  299 (423)
T 4fie_A          230 LEGGALTDIVTH--TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLT-----HDGRVKLSDFGFCAQVSK  299 (423)
T ss_dssp             CTTEEHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEEC-----TTCCEEECCCTTCEECCS
T ss_pred             CCCCcHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEc-----CCCCEEEecCccceECCC
Confidence            999999999964  3589999999999999999999999   999999999999998     788999999999987754


Q ss_pred             CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      ... .....+||+.|||||++.+..|+.++|||||||++|||++|+.||......+.        .    ..+....   
T Consensus       300 ~~~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~--------~----~~i~~~~---  363 (423)
T 4fie_A          300 EVP-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--------M----KMIRDNL---  363 (423)
T ss_dssp             SCC-CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--------H----HHHHHSC---
T ss_pred             CCc-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH--------H----HHHHcCC---
Confidence            432 23457899999999999999999999999999999999999999975432211        0    1111110   


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                          .+...........+.+|+.+||+.||++|||++|++++
T Consensus       364 ----~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H  401 (423)
T 4fie_A          364 ----PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  401 (423)
T ss_dssp             ----CCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ----CCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence                01111111234577889999999999999999999874

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=4.7e-48  Score=410.35  Aligned_cols=272  Identities=21%  Similarity=0.259  Sum_probs=202.2

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCC----eEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED----KRLL  564 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~~~l  564 (788)
                      ++.+.++||+|+||+||+|.+    .+..||||++..... ....+..|+..+.+++|||||++++++.+++    ..+|
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~----~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l   78 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKW----RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEE----TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE----CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence            356678999999999999987    356899999975432 2233456777778899999999999997654    5799


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhc-----cCCceEecCCCCCcEEeccCCCCCCCcEEEee
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE-----CETQIIHCDIKPQNVLLDLKTLDTNYMAKISD  639 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-----~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~D  639 (788)
                      ||||+++|+|.++|...  .+++..+.+++.|+++||+|||++     +.++|+||||||+||||+     .++.+||+|
T Consensus        79 V~Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~-----~~~~~Ki~D  151 (303)
T 3hmm_A           79 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK-----KNGTCCIAD  151 (303)
T ss_dssp             EEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEEC-----TTSCEEECC
T ss_pred             EecCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEEC-----CCCCEEEEe
Confidence            99999999999999653  689999999999999999999976     245899999999999998     889999999


Q ss_pred             cCCccccCCCCCc---ccccccCCccccCcccccCC------CCCccCcchhhHHHHHHHHhCCCCCCcccccccccc--
Q 047157          640 FGISKLLNKDQTR---TDTNMRGTMGYVAPEWLRNV------PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEE--  708 (788)
Q Consensus       640 fg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~--  708 (788)
                      ||+++........   ......||+.|||||++.+.      .++.++|||||||+||||+||+.|+......+....  
T Consensus       152 FGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~  231 (303)
T 3hmm_A          152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL  231 (303)
T ss_dssp             CTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTT
T ss_pred             CCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhc
Confidence            9999876543322   12345799999999998654      477899999999999999999888754322111000  


Q ss_pred             --chhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          709 --VDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       709 --~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                        ....... .........++.-   -+......+..+.+.+|+.+||+.||++||||.||+++|+++.+
T Consensus       232 ~~~~~~~~~-~~~~~~~~~~rp~---~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~  297 (303)
T 3hmm_A          232 VPSDPSVEE-MRKVVCEQKLRPN---IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             SCSSCCHHH-HHHHHTTSCCCCC---CCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccccchHHH-HHHHHhcccCCCC---CCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence              0000111 1111111111100   11222234567788999999999999999999999999987654

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1.9e-48  Score=419.65  Aligned_cols=265  Identities=27%  Similarity=0.388  Sum_probs=212.6

Q ss_pred             HHHHHhhcccccccccccceEEEEEEecc---Ccceeeeeeecccch-HHHHHHHHHHHHHhcCCCc-cccceEeeEEec
Q 047157          484 ELQEATKGFSKLVGTGSSGKVYRGILRLK---DTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHH-KNLVRLLGFCSE  558 (788)
Q Consensus       484 ~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~  558 (788)
                      |+....+.+.++||+|+||+||+|.+...   ...+.||||.+.... ....+.|.+|+++|.+++| ||||+++|+|.+
T Consensus        60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~  139 (353)
T 4ase_A           60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK  139 (353)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred             EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence            34556778889999999999999998632   234689999996543 3456789999999999965 999999999966


Q ss_pred             -CCeEEEEEecCCCCCHhHhhhcc---------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcE
Q 047157          559 -EDKRLLVYELMPNGTLSNFLFHE---------------GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNV  622 (788)
Q Consensus       559 -~~~~~lV~e~~~~gsL~~~l~~~---------------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  622 (788)
                       ++..+||||||++|+|.++|+..               ...+++..++.++.|||+||.|||++   +||||||||+||
T Consensus       140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NI  216 (353)
T 4ase_A          140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNI  216 (353)
T ss_dssp             TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred             cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccce
Confidence             45789999999999999999653               23478999999999999999999999   999999999999


Q ss_pred             EeccCCCCCCCcEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCcc
Q 047157          623 LLDLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELS  700 (788)
Q Consensus       623 ll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~  700 (788)
                      |++     .++.+||+|||+|+.+...... ......||+.|||||++.+..++.++|||||||+||||+| |+.||...
T Consensus       217 Ll~-----~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~  291 (353)
T 4ase_A          217 LLS-----EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV  291 (353)
T ss_dssp             EEC-----GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             eeC-----CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence            998     8889999999999977554333 3344678999999999999999999999999999999998 89999764


Q ss_pred             ccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          701 RVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       701 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ...+.           +...+..+..       +.  .+....+++.+++.+||+.||++|||++||+++|+++++
T Consensus       292 ~~~~~-----------~~~~i~~g~~-------~~--~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq  347 (353)
T 4ase_A          292 KIDEE-----------FCRRLKEGTR-------MR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  347 (353)
T ss_dssp             CCSHH-----------HHHHHHHTCC-------CC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CHHHH-----------HHHHHHcCCC-------CC--CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence            32111           1111111110       11  111234568889999999999999999999999988764

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.2e-47  Score=398.00  Aligned_cols=245  Identities=22%  Similarity=0.321  Sum_probs=190.5

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||+||+|..+  .+++.||||.+.+..   ....+.+.+|++++++++|||||++++++.+++..|+|
T Consensus        14 ~Y~i~~~lG~G~fg~V~~~~~~--~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv   91 (275)
T 3hyh_A           14 NYQIVKTLGEGSFGKVKLAYHT--TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV   91 (275)
T ss_dssp             CCEEEEEEEC---CCEEEEECT--TTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CeEEEEEEecCcCeEEEEEEEC--CCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            5788899999999999999876  677899999986543   33456799999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+ +|+|.+++.+. ..+++.++..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||+|+.
T Consensus        92 mEy~-~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~-----~~~~vkl~DFGla~~  161 (275)
T 3hyh_A           92 IEYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLD-----EHLNVKIADFGLSNI  161 (275)
T ss_dssp             EECC-CEEHHHHHHHS-CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEEC-----TTCCEEECCSSCC--
T ss_pred             EeCC-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEEC-----CCCCEEEeecCCCee
Confidence            9999 68999999665 5689999999999999999999999   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCC-CccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .....  ......||+.|||||++.+..+ +.++||||+||++|||++|+.||...+..+.            ......+
T Consensus       162 ~~~~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~------------~~~i~~~  227 (275)
T 3hyh_A          162 MTDGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL------------FKNISNG  227 (275)
T ss_dssp             ---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHHHT
T ss_pred             cCCCC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHH------------HHHHHcC
Confidence            64332  2234689999999999998886 5799999999999999999999975432111            1111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ..        ...  ....+++.+++.+||+.||++|||++|+++
T Consensus       228 ~~--------~~p--~~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          228 VY--------TLP--KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             CC--------CCC--TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CC--------CCC--CCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            11        100  112356788999999999999999999987

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.1e-47  Score=403.64  Aligned_cols=249  Identities=25%  Similarity=0.267  Sum_probs=196.7

Q ss_pred             hhcccccccccccceEEEEEEec-cCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRL-KDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||+||+|+... ..+++.||||.+++..  ......+.+|++++++++|||||++++++.+++..|||
T Consensus        25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv  104 (304)
T 3ubd_A           25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI  104 (304)
T ss_dssp             GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred             ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            47888999999999999998753 3457789999986532  22334688999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++|+|.+++.+. ..+++.++..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||+|+.
T Consensus       105 mEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~-----~~g~vKl~DFGla~~  175 (304)
T 3ubd_A          105 LDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLD-----EEGHIKLTDFGLSKE  175 (304)
T ss_dssp             ECCCTTCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEEC-----TTSCEEEESSEEEEC
T ss_pred             EEcCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEc-----CCCCEEeccccccee
Confidence            9999999999999765 5689999999999999999999999   999999999999998     888999999999986


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ...... .....+||+.|||||++.+..++.++|||||||++|||++|+.||...+..+.            ........
T Consensus       176 ~~~~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~------------~~~i~~~~  242 (304)
T 3ubd_A          176 SIDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET------------MTMILKAK  242 (304)
T ss_dssp             -----C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHHHCC
T ss_pred             ccCCCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHH------------HHHHHcCC
Confidence            543322 23346899999999999999999999999999999999999999976532221            11111111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS-----MKKVIH  769 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~  769 (788)
                      .        ..  +.....++.+|+.+||+.||++|||     ++|+++
T Consensus       243 ~--------~~--p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          243 L--------GM--PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             C--------CC--CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             C--------CC--CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence            1        11  1112456788999999999999998     467775

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.1e-45  Score=390.37  Aligned_cols=248  Identities=21%  Similarity=0.343  Sum_probs=187.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCC-------
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED-------  560 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-------  560 (788)
                      .|.+.+.||+|+||+||+|..+  .++..||||+++... ....+.+.+|+++|++++|||||++++++.+.+       
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~--~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~   83 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNK--VDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP   83 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEET--TTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred             hCEEeeEEecCCCeEEEEEEEC--CCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence            4777899999999999999886  677899999986543 445578999999999999999999999986544       


Q ss_pred             -----eEEEEEecCCCCCHhHhhhccCC--CCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCC
Q 047157          561 -----KRLLVYELMPNGTLSNFLFHEGQ--RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNY  633 (788)
Q Consensus       561 -----~~~lV~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~  633 (788)
                           ..|+||||+++|+|.+++.....  ..++..++.++.||+.||+|||++   +|+||||||+|||++     .++
T Consensus        84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~-----~~~  155 (299)
T 4g31_A           84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFT-----MDD  155 (299)
T ss_dssp             ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC-----TTC
T ss_pred             cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEEC-----CCC
Confidence                 36999999999999999976533  345677889999999999999999   999999999999998     788


Q ss_pred             cEEEeecCCccccCCCCCc-----------ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCcccc
Q 047157          634 MAKISDFGISKLLNKDQTR-----------TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRV  702 (788)
Q Consensus       634 ~~kL~Dfg~a~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~  702 (788)
                      .+||+|||+|+.+......           .....+||+.|||||++.+..++.++|||||||++|||++   ||.....
T Consensus       156 ~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~  232 (299)
T 4g31_A          156 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME  232 (299)
T ss_dssp             CEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH
T ss_pred             cEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH
Confidence            9999999999877543221           1233579999999999999999999999999999999996   7753210


Q ss_pred             ccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          703 EEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       703 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .          .. ............         ........+.+++.+||+.||++|||+.|+++
T Consensus       233 ~----------~~-~~~~~~~~~~p~---------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          233 R----------VR-TLTDVRNLKFPP---------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             H----------HH-HHHHHHTTCCCH---------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             H----------HH-HHHHHhcCCCCC---------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            0          00 001111111110         11223345678999999999999999999987

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.9e-43  Score=384.83  Aligned_cols=262  Identities=21%  Similarity=0.285  Sum_probs=201.0

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEec------CC
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSE------ED  560 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~  560 (788)
                      .|.+.++||+|+||+||+|.++  .+++.||||++....  ....+.+.+|+++|++++|||||++++++..      .+
T Consensus        55 ~Y~~~~~lG~G~fG~V~~a~~~--~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~  132 (398)
T 4b99_A           55 EYEIIETIGNGAYGVVSSARRR--LTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK  132 (398)
T ss_dssp             SEEEEEEEEECSSCEEEEEEET--TTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred             CeEEEEEEecccCeEEEEEEEC--CCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence            4777899999999999999987  678899999996532  3445678899999999999999999998753      46


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ..||||||++ |+|.+++.+. ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+||
T Consensus       133 ~~~ivmE~~~-g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~-----~~~~~Ki~DF  202 (398)
T 4b99_A          133 SVYVVLDLME-SDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVN-----ENCELKIGDF  202 (398)
T ss_dssp             CEEEEEECCS-EEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEEC-----TTCCEEECCC
T ss_pred             EEEEEEeCCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccC-----CCCCEEEeec
Confidence            7899999995 6899999654 5789999999999999999999999   999999999999998     8889999999


Q ss_pred             CCccccCCCC---CcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHH
Q 047157          641 GISKLLNKDQ---TRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDW  716 (788)
Q Consensus       641 g~a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~  716 (788)
                      |+++.+....   .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.+..+....        
T Consensus       203 Gla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~--------  274 (398)
T 4b99_A          203 GMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQL--------  274 (398)
T ss_dssp             TTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHH--------
T ss_pred             ceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHH--------
Confidence            9998764322   2233457899999999998775 569999999999999999999999986543221111        


Q ss_pred             HHHHhhccc-----------ccccccCCC-CCcccH-----HHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          717 VISCMLSRN-----------LQVLVSHDP-EVLSDL-----ERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       717 ~~~~~~~~~-----------~~~l~~~~~-~~~~~~-----~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      +........           ....+...+ ......     ....++.+|+.+||+.||++|||++|++++
T Consensus       275 I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          275 IMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH  345 (398)
T ss_dssp             HHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             HHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            000000000           000000000 000111     123567899999999999999999999873

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=6.6e-43  Score=379.02  Aligned_cols=199  Identities=22%  Similarity=0.338  Sum_probs=168.9

Q ss_pred             hhcccccccccccceEEEEEEecc-CcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .|.+.++||+|+||+||+|+.+.+ ..++.||||.+....  ...++.+|+++|+.+ +||||+++++++.+.+..++||
T Consensus        22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm   99 (361)
T 4f9c_A           22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM   99 (361)
T ss_dssp             TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred             cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence            477889999999999999987632 457799999886543  345678999999988 6999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++|+|.+++    +.+++.++..++.||+.||+|||++   +|+||||||+|||++.    +.+.+||+|||+|+..
T Consensus       100 E~~~g~~L~~~~----~~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~----~~~~~kl~DFGla~~~  168 (361)
T 4f9c_A          100 PYLEHESFLDIL----NSLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNR----RLKKYALVDFGLAQGT  168 (361)
T ss_dssp             ECCCCCCHHHHH----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEET----TTTEEEECCCTTCEEC
T ss_pred             eCCCcccHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeC----CCCeEEECcCCCCccc
Confidence            999999999998    3588999999999999999999999   9999999999999982    3378999999999865


Q ss_pred             CCCCC---------------------------cccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCC
Q 047157          647 NKDQT---------------------------RTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIE  698 (788)
Q Consensus       647 ~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~  698 (788)
                      .....                           ......+||+.|+|||++.+. .++.++||||+||++|||++|+.||.
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~  248 (361)
T 4f9c_A          169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY  248 (361)
T ss_dssp             TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred             CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence            43211                           112335799999999999775 58999999999999999999999996


Q ss_pred             cc
Q 047157          699 LS  700 (788)
Q Consensus       699 ~~  700 (788)
                      ..
T Consensus       249 ~~  250 (361)
T 4f9c_A          249 KA  250 (361)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=4.9e-43  Score=402.89  Aligned_cols=254  Identities=24%  Similarity=0.294  Sum_probs=211.3

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .|.+.+.||+|+||.||+|..+  .++..||+|.+........+.+.+|+++|+.++|||||++++++.+.+..+|||||
T Consensus       158 ~Y~i~~~lG~G~fg~V~~~~~~--~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          158 HYDIHEELGTGAFGVVHRVTER--ATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccEEEEEEeeccCeEEEEEEEC--CCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            4778899999999999999887  67889999999876666677899999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      |++|+|.++|......+++.++..++.||+.||.|||++   +|+||||||+|||++.+   ..+.+||+|||+++.+..
T Consensus       236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~---~~~~vKl~DFG~a~~~~~  309 (573)
T 3uto_A          236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTK---RSNELKLIDFGLTAHLDP  309 (573)
T ss_dssp             CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSS---SCCCEEECCCSSCEECCT
T ss_pred             cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCC---CCCCEEEeeccceeEccC
Confidence            999999999977767899999999999999999999999   99999999999999732   347899999999998754


Q ss_pred             CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      ...  ....+||+.|||||++.+..++.++|||||||++|||++|+.||......+..            ..+...... 
T Consensus       310 ~~~--~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~------------~~i~~~~~~-  374 (573)
T 3uto_A          310 KQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL------------RNVKSCDWN-  374 (573)
T ss_dssp             TSE--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH------------HHHHTTCCC-
T ss_pred             CCc--eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH------------HHHHhCCCC-
Confidence            432  23467999999999999999999999999999999999999999765332211            111111100 


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                           ..........+.+.+|+.+||+.||++|||++|++++
T Consensus       375 -----~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          375 -----MDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  411 (573)
T ss_dssp             -----CCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             -----CCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                 0001111224567889999999999999999999874

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=4.1e-42  Score=370.20  Aligned_cols=289  Identities=40%  Similarity=0.720  Sum_probs=239.0

Q ss_pred             CCcccCHHHHHHHhhcc--cccccccccceEEEEEEeccCcceeeeeeecccchH-HHHHHHHHHHHHhcCCCccccceE
Q 047157          476 NFREFTFQELQEATKGF--SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE-KTNEEFMTELKIIGRTHHKNLVRL  552 (788)
Q Consensus       476 ~~~~~~~~~l~~~t~~~--~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~hpniv~~  552 (788)
                      ..+.+++.++...+.++  .+.||+|+||.||+|..   .++..||||++..... .....+.+|++++++++||||+++
T Consensus        16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   92 (326)
T 3uim_A           16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL---ADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL   92 (326)
T ss_dssp             CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECC---SSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred             ccceecHHHHHHHhhccccceeEecCCCcEEEEEEe---cCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccce
Confidence            45678888888776655  58999999999999975   3567999999875432 223368999999999999999999


Q ss_pred             eeEEecCCeEEEEEecCCCCCHhHhhhccC---CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCC
Q 047157          553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEG---QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL  629 (788)
Q Consensus       553 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~  629 (788)
                      ++++.+.+..++||||+++++|.+++....   ..+++..+..++.||+.||.|||+++..+|+||||||+|||++    
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~----  168 (326)
T 3uim_A           93 RGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD----  168 (326)
T ss_dssp             CEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC----
T ss_pred             EEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC----
Confidence            999999999999999999999999997643   3489999999999999999999998777999999999999998    


Q ss_pred             CCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccc
Q 047157          630 DTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEV  709 (788)
Q Consensus       630 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~  709 (788)
                       .++.+||+|||++...............||+.|+|||.+.+..++.++||||||+++|||++|+.||.......   ..
T Consensus       169 -~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~  244 (326)
T 3uim_A          169 -EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN---DD  244 (326)
T ss_dssp             -TTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTT---TS
T ss_pred             -CCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccccccccc---cc
Confidence             78899999999998776555555555679999999999988899999999999999999999999997433221   12


Q ss_pred             hhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          710 DIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       710 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      .....++.........+..+.+............+.+.+++.+||+.||++|||++||+++|++..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~  310 (326)
T 3uim_A          245 DVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG  310 (326)
T ss_dssp             CSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred             chhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence            233445555555555666666666666667788899999999999999999999999999998754

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.7e-42  Score=393.52  Aligned_cols=248  Identities=24%  Similarity=0.273  Sum_probs=199.1

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch------HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI------EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      .|.+.++||+|+||+||+|+.+  .++..||||++.+..      .........++++++.++|||||++++++.+.+..
T Consensus       190 df~i~k~LG~G~fG~V~la~~~--~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          190 DFSVHRIIGRGGFGEVYGCRKA--DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             HeEEEEEEecccCeEEEEEEEC--CCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            3667799999999999999887  778899999996532      11122334457788889999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ||||||++||+|.++|.+. ..+++..+..++.||+.||.|||++   +||||||||+||||+     .++++||+|||+
T Consensus       268 ylVmEy~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld-----~~G~vKL~DFGl  338 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLD-----EHGHVRISDLGL  338 (689)
T ss_dssp             EEEECCCCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEEC-----TTSCEEECCCTT
T ss_pred             EEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEe-----CCCCEEecccce
Confidence            9999999999999999765 5689999999999999999999999   999999999999999     889999999999


Q ss_pred             ccccCCCCCcccccccCCccccCccccc-CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLR-NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      |+.+....   ....+||+.|||||++. +..|+.++|||||||++|||++|+.||.........     .+    ....
T Consensus       339 A~~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~-----~i----~~~i  406 (689)
T 3v5w_A          339 ACDFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-----EI----DRMT  406 (689)
T ss_dssp             CEECSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH-----HH----HHHH
T ss_pred             eeecCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-----HH----HHhh
Confidence            98765433   23468999999999996 457999999999999999999999999764322110     00    0111


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS-----MKKVIH  769 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~  769 (788)
                      ....        +..  +.....++.+|+.+||+.||++|++     ++||++
T Consensus       407 ~~~~--------~~~--p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          407 LTMA--------VEL--PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             HHCC--------CCC--CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             cCCC--------CCC--CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence            1111        111  1122456788999999999999998     788875

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=1.7e-41  Score=364.63  Aligned_cols=273  Identities=36%  Similarity=0.616  Sum_probs=226.7

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      |.+.+.||+|+||+||+|.+   .++..||||++........+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus        41 y~~~~~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  117 (321)
T 2qkw_B           41 FDHKFLIGHGVFGKVYKGVL---RDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYM  117 (321)
T ss_dssp             CSCCCCSCBCSSSEEEEEEC---TTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECC
T ss_pred             cCccceeecCCCeeEEEEEE---CCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcC
Confidence            44568899999999999986   356799999987666666788999999999999999999999999999999999999


Q ss_pred             CCCCHhHhhhccC---CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          570 PNGTLSNFLFHEG---QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       570 ~~gsL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ++++|.+++....   ..+++..++.++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++...
T Consensus       118 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~-----~~~~~kl~Dfg~~~~~  189 (321)
T 2qkw_B          118 ENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLD-----ENFVPKITDFGISKKG  189 (321)
T ss_dssp             TTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEEC-----TTCCEEECCCTTCEEC
T ss_pred             CCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEEC-----CCCCEEEeeccccccc
Confidence            9999999996543   3589999999999999999999999   999999999999998     7889999999999865


Q ss_pred             CCCC-CcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          647 NKDQ-TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       647 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      .... ........||+.|+|||.+.+..++.++||||||+++|||++|+.||......+..     ....|.........
T Consensus       190 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~  264 (321)
T 2qkw_B          190 TELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV-----NLAEWAVESHNNGQ  264 (321)
T ss_dssp             SSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCC-----CHHHHTHHHHTTTC
T ss_pred             ccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHH-----HHHHHhhhcccccc
Confidence            4322 22223356899999999998889999999999999999999999999765433221     22334444444555


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCCC
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVG  778 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~~  778 (788)
                      +...++.........+..+.+.+++.+||+.||++|||++||+++|+.++...
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~  317 (321)
T 2qkw_B          265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ  317 (321)
T ss_dssp             CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence            55555555555556778889999999999999999999999999999876544

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=3.1e-41  Score=360.65  Aligned_cols=260  Identities=26%  Similarity=0.390  Sum_probs=212.9

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      ..+.+.++||+|+||+||+|.+.  .++..||+|.+........+.+.+|++++++++||||+++++++.+++..++|||
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~--~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   87 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHR--ETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE   87 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEET--TTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hHeeccceecCCCCEEEEEEEEC--CCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence            34667899999999999999886  6677999999877667778899999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++++|.+++......+++.++..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||++....
T Consensus        88 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~-----~~~~~kl~Dfg~~~~~~  159 (310)
T 3s95_A           88 YIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVR-----ENKNVVVADFGLARLMV  159 (310)
T ss_dssp             CCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEC-----TTSCEEECCCTTCEECC
T ss_pred             ecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEEC-----CCCCEEEeecccceecc
Confidence            9999999999988778899999999999999999999999   999999999999998     78899999999998764


Q ss_pred             CCCCcc-------------cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhH
Q 047157          648 KDQTRT-------------DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS  714 (788)
Q Consensus       648 ~~~~~~-------------~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~  714 (788)
                      ......             .....||+.|+|||.+.+..++.++||||||+++|||++|..|+............  ...
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~--~~~  237 (310)
T 3s95_A          160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL--NVR  237 (310)
T ss_dssp             --------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB--CHH
T ss_pred             cccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh--hhh
Confidence            432211             11457899999999999999999999999999999999999998754332211111  111


Q ss_pred             HHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          715 DWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       715 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ..... .    .            .......+.+++.+||+.||++|||++|+++.|+.+..
T Consensus       238 ~~~~~-~----~------------~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~  282 (310)
T 3s95_A          238 GFLDR-Y----C------------PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM  282 (310)
T ss_dssp             HHHHH-T----C------------CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccccc-c----C------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            11000 0    0            00112457789999999999999999999999987653

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=3e-41  Score=360.41  Aligned_cols=265  Identities=27%  Similarity=0.431  Sum_probs=200.0

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ..|.+.+.||+|+||+||+|..    .+..||||.+....  ....+++.+|++++++++||||+++++++.+.+..++|
T Consensus        37 ~~y~i~~~lG~G~~g~V~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 3p86_A           37 CDLNIKEKIGAGSFGTVHRAEW----HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV  112 (309)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEE----TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred             hHceeeeEeecCCCeEEEEEEE----CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence            4567789999999999999976    35689999986443  44557899999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCC--CCCHHHHHHHHHHHHHHHHHhhhccCCc--eEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          566 YELMPNGTLSNFLFHEGQ--RPGWVQRVEIALGVARGLLYLHEECETQ--IIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      |||+++++|.+++.....  .+++..++.++.||+.||+|||++   +  |+||||||+|||++     .++.+||+|||
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~-----~~~~~kL~Dfg  184 (309)
T 3p86_A          113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVD-----KKYTVKVCDFG  184 (309)
T ss_dssp             EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEEC-----TTCCEEECCCC
T ss_pred             EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEe-----CCCcEEECCCC
Confidence            999999999999976532  389999999999999999999998   8  99999999999998     78899999999


Q ss_pred             CccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      ++........ ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+..        .   ...
T Consensus       185 ~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~--------~---~~~  252 (309)
T 3p86_A          185 LSRLKASTFL-SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVV--------A---AVG  252 (309)
T ss_dssp             ------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHH--------H---HHH
T ss_pred             CCcccccccc-ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--------H---HHH
Confidence            9986543221 223457899999999999999999999999999999999999999754322110        0   000


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCCCCCCCCCC
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMPPLLHD  785 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~~~pp~p~~  785 (788)
                      ...         ............+.+++.+||+.||++|||++|+++.|+.+.....||.++.
T Consensus       253 ~~~---------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~~~~~  307 (309)
T 3p86_A          253 FKC---------KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNRS  307 (309)
T ss_dssp             HSC---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---------
T ss_pred             hcC---------CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCCCCcc
Confidence            000         0001111233568889999999999999999999999999988777766554

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=3.5e-41  Score=362.65  Aligned_cols=265  Identities=28%  Similarity=0.483  Sum_probs=212.9

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccC-cceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      +....|.+.+.||+|+||+||+|.+...+ .+..||||.+... .....+.+.+|++++++++||||+++++++.+.+..
T Consensus        46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  125 (325)
T 3kul_A           46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA  125 (325)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred             cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence            34456777899999999999999986322 3456999999754 345567899999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||+++++|.+++......+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+
T Consensus       126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~-----~~~~~kl~Dfg~  197 (325)
T 3kul_A          126 MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVD-----SNLVCKVSDFGL  197 (325)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----TTCCEEECCCSS
T ss_pred             EEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEC-----CCCCEEECCCCc
Confidence            999999999999999987777899999999999999999999999   999999999999998     788999999999


Q ss_pred             ccccCCCCCc--ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHH
Q 047157          643 SKLLNKDQTR--TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVIS  719 (788)
Q Consensus       643 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~  719 (788)
                      +.........  ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+.            ..
T Consensus       198 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~------------~~  265 (325)
T 3kul_A          198 SRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV------------IS  265 (325)
T ss_dssp             CEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH------------HH
T ss_pred             ccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHH------------HH
Confidence            9876543322  2223446778999999998899999999999999999999 9999965432211            01


Q ss_pred             HhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCCC
Q 047157          720 CMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVG  778 (788)
Q Consensus       720 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~~  778 (788)
                      .....         ............+.+++.+||+.||++|||++||+++|+.+...+
T Consensus       266 ~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~  315 (325)
T 3kul_A          266 SVEEG---------YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP  315 (325)
T ss_dssp             HHHTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred             HHHcC---------CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence            11111         011111223467888999999999999999999999999876543

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=1.5e-40  Score=353.05  Aligned_cols=250  Identities=24%  Similarity=0.328  Sum_probs=206.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .|.+.+.||+|+||+||+|...  .++..||||.+........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus        21 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           21 KYTRFEKIGQGASGTVYTAMDV--ATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             TBCCCEEEEEETTEEEEEEEBT--TTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ceeeeeeeccCCCeEEEEEEEC--CCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            4666789999999999999875  66779999998766555677889999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++++|.+++...  .+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++.....
T Consensus        99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~-----~~~~~kl~Dfg~~~~~~~  168 (297)
T 3fxz_A           99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLG-----MDGSVKLTDFGFCAQITP  168 (297)
T ss_dssp             CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----TTCCEEECCCTTCEECCS
T ss_pred             CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEC-----CCCCEEEeeCCCceecCC
Confidence            9999999999654  588999999999999999999999   999999999999998     788999999999987654


Q ss_pred             CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      .... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||.........           .......    
T Consensus       169 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-----------~~~~~~~----  232 (297)
T 3fxz_A          169 EQSK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL-----------YLIATNG----  232 (297)
T ss_dssp             TTCC-BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-----------HHHHHHC----
T ss_pred             cccc-cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH-----------HHHHhCC----
Confidence            3332 23467999999999999999999999999999999999999999754321110           0000000    


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                          .+...........+.+++.+||+.||++|||++|++++
T Consensus       233 ----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          233 ----TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             ----SCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ----CCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence                11111122334568889999999999999999999874

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=3.1e-40  Score=361.66  Aligned_cols=260  Identities=28%  Similarity=0.419  Sum_probs=210.8

Q ss_pred             HhhcccccccccccceEEEEEEec-----cCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecCC
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRL-----KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEED  560 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~-----~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~  560 (788)
                      ..|.+.+.||+|+||.||+|....     ...+..||||.+.... ....+.+.+|+++++++ +||||+++++++.+.+
T Consensus        81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~  160 (370)
T 2psq_A           81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG  160 (370)
T ss_dssp             GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred             HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence            456778999999999999998752     2345689999997543 44567899999999999 8999999999999999


Q ss_pred             eEEEEEecCCCCCHhHhhhccC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEG---------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLD  625 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  625 (788)
                      ..++||||+++|+|.+++....               ..+++..++.++.||+.||.|||++   +|+||||||+|||++
T Consensus       161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~  237 (370)
T 2psq_A          161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVT  237 (370)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC
T ss_pred             CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEEC
Confidence            9999999999999999997643               3478999999999999999999999   999999999999998


Q ss_pred             cCCCCCCCcEEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccc
Q 047157          626 LKTLDTNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVE  703 (788)
Q Consensus       626 ~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~  703 (788)
                           .++.+||+|||+++....... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus       238 -----~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~  312 (370)
T 2psq_A          238 -----ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE  312 (370)
T ss_dssp             -----TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred             -----CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence                 788999999999987654332 22233557889999999999999999999999999999999 99999764322


Q ss_pred             cccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          704 EESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       704 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      +..            .....+..         ...+......+.+++.+||+.||++|||++|+++.|+.++.
T Consensus       313 ~~~------------~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          313 ELF------------KLLKEGHR---------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             GHH------------HHHHTTCC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHH------------HHHhcCCC---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            110            11111110         01111234578889999999999999999999999998753

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=8.5e-41  Score=349.35  Aligned_cols=259  Identities=25%  Similarity=0.425  Sum_probs=212.9

Q ss_pred             HHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ....|.+.+.||+|+||.||+|...   ++..||+|.+.... ...+++.+|++++.+++||||+++++++.+.+..++|
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWK---GQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV   81 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET---TTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred             chhheeeeeeeccCCCceEEEEEec---CceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEE
Confidence            3456778899999999999999774   56689999987543 2346789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++...+..+++..++.++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++..
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~-----~~~~~~l~Dfg~~~~  153 (268)
T 3sxs_A           82 TEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVD-----RDLCVKVSDFGMTRY  153 (268)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEEC-----TTCCEEECCTTCEEE
T ss_pred             EEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEEC-----CCCCEEEccCcccee
Confidence            999999999999987767799999999999999999999999   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .............+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+..            ......
T Consensus       154 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~------------~~~~~~  221 (268)
T 3sxs_A          154 VLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV------------LKVSQG  221 (268)
T ss_dssp             CCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH------------HHHHTT
T ss_pred             cchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHH------------HHHHcC
Confidence            76554444444566788999999999899999999999999999999 99999754322110            001111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCC
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEV  777 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~  777 (788)
                      .         ....+....+.+.+++.+||+.||++|||++|+++.|+.+.+.
T Consensus       222 ~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          222 H---------RLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             C---------CCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             C---------CCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            0         0000111235688899999999999999999999999987653

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=6.3e-40  Score=352.24  Aligned_cols=263  Identities=22%  Similarity=0.313  Sum_probs=213.1

Q ss_pred             CCcccCHHHHHHHhhc------------ccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcC
Q 047157          476 NFREFTFQELQEATKG------------FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR  543 (788)
Q Consensus       476 ~~~~~~~~~l~~~t~~------------~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~  543 (788)
                      ....++++++..++..            ..+.||+|+||.||+|...  .++..||||.+........+.+.+|+.++++
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~--~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~   98 (321)
T 2c30_A           21 QSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREK--HSGRQVAVKMMDLRKQQRRELLFNEVVIMRD   98 (321)
T ss_dssp             ----CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEETTTCCSHHHHHHHHHHHTT
T ss_pred             cCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEEC--CCCcEEEEEEEeccchhHHHHHHHHHHHHHh
Confidence            3456888888887743            3468999999999999886  5677999999976656667789999999999


Q ss_pred             CCccccceEeeEEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEE
Q 047157          544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVL  623 (788)
Q Consensus       544 l~hpniv~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIl  623 (788)
                      ++||||+++++++...+..++||||+++++|.+++..  ..+++..+..++.||+.||.|||++   +|+||||||+|||
T Consensus        99 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl  173 (321)
T 2c30_A           99 YQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSIL  173 (321)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             CCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence            9999999999999999999999999999999999853  4689999999999999999999999   9999999999999


Q ss_pred             eccCCCCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccc
Q 047157          624 LDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVE  703 (788)
Q Consensus       624 l~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~  703 (788)
                      ++     .++.+||+|||++......... .....||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus       174 l~-----~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~  247 (321)
T 2c30_A          174 LT-----LDGRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV  247 (321)
T ss_dssp             EC-----TTCCEEECCCTTCEECCSSSCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred             EC-----CCCcEEEeeeeeeeecccCccc-cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            98     7889999999999876543322 23467999999999999999999999999999999999999999754221


Q ss_pred             cccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          704 EESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       704 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ..            ........       .+...........+.+++.+||+.||++|||++|+++.
T Consensus       248 ~~------------~~~~~~~~-------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          248 QA------------MKRLRDSP-------PPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             HH------------HHHHHHSS-------CCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HH------------HHHHhcCC-------CCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            10            01111110       11111112234567889999999999999999999874

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.1e-40  Score=348.88  Aligned_cols=257  Identities=25%  Similarity=0.422  Sum_probs=210.9

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      ..|.+.+.||+|+||+||+|...   .+..||+|++.... ...+++.+|++++++++||||+++++++.+.+..++|||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWL---NKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE   85 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET---TTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             hhceeeheecCCCccEEEEEEec---CCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence            45677899999999999999874   45679999987543 234678999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++++|.+++......+++..++.++.|++.||.|||++   +|+||||||+||+++     .++.+||+|||++....
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~-----~~~~~kl~Dfg~~~~~~  157 (269)
T 4hcu_A           86 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVG-----ENQVIKVSDFGMTRFVL  157 (269)
T ss_dssp             CCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC-----GGGCEEECCTTGGGGBC
T ss_pred             eCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEc-----CCCCEEecccccccccc
Confidence            9999999999987777899999999999999999999999   999999999999998     77899999999998765


Q ss_pred             CCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      ...........+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+.            ........ 
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~------------~~~~~~~~-  224 (269)
T 4hcu_A          158 DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV------------VEDISTGF-  224 (269)
T ss_dssp             CHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH------------HHHHHTTC-
T ss_pred             ccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHH------------HHHHhcCc-
Confidence            433333334556788999999998999999999999999999999 9999975432211            01111110 


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCC
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEV  777 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~  777 (788)
                              ....+......+.+++.+||+.||++|||++|++++|+++.+.
T Consensus       225 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          225 --------RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             --------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             --------cCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence                    0001111245688899999999999999999999999887643

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=2.3e-41  Score=358.95  Aligned_cols=274  Identities=23%  Similarity=0.370  Sum_probs=211.0

Q ss_pred             HHHHhhcccccccccccceEEEEEEe--ccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEec--CC
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILR--LKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE--ED  560 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~--~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~  560 (788)
                      +....|.+.+.||+|+||+||++.+.  ...++..||||++........+.+.+|++++++++||||+++++++..  ..
T Consensus         7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   86 (295)
T 3ugc_A            7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR   86 (295)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred             CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence            34456778899999999999999853  235678999999987777777889999999999999999999999855  35


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ..++||||+++++|.+++......+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+||
T Consensus        87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~-----~~~~~kl~Df  158 (295)
T 3ugc_A           87 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVE-----NENRVKIGDF  158 (295)
T ss_dssp             SCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEE-----ETTEEEECCC
T ss_pred             ceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEc-----CCCeEEEccC
Confidence            68999999999999999987767799999999999999999999999   999999999999998     7789999999


Q ss_pred             CCccccCCCCCc--ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCcccccccc----ccchhhhH
Q 047157          641 GISKLLNKDQTR--TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEES----EEVDIVLS  714 (788)
Q Consensus       641 g~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~----~~~~~~~~  714 (788)
                      |++.........  ......++..|+|||.+.+..++.++||||||+++|||++|..|+.........    ........
T Consensus       159 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~  238 (295)
T 3ugc_A          159 GLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV  238 (295)
T ss_dssp             CSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHH
T ss_pred             cccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhH
Confidence            999876543321  222345677899999999999999999999999999999999998654321100    00000001


Q ss_pred             HHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          715 DWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       715 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ..........         ..........+.+.+++.+||+.||++|||++|+++.|+.+.
T Consensus       239 ~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~  290 (295)
T 3ugc_A          239 FHLIELLKNN---------GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR  290 (295)
T ss_dssp             HHHHHHHHTT---------CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHhcc---------CcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            1111111111         111112233467889999999999999999999999998764

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=100.00  E-value=8e-41  Score=345.41  Aligned_cols=225  Identities=21%  Similarity=0.336  Sum_probs=177.1

Q ss_pred             CcCCCccCCCCceecCCCCeeecCCCeEEEeeeecCCCceEEEEEeCCCCCCeEEEEecCCCCCCC-----CcEEEEecC
Q 047157           22 GQTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEA-----GSKITLTND   96 (788)
Q Consensus        22 ~~~~~~i~~~~~l~~~~~~~~vS~~g~F~lGFf~~~~~~~y~giw~~~~~~~tvVWvANr~~p~~~-----~s~l~l~~~   96 (788)
                      +++.++|++|++|+++  ++||||+|+||||||.+  +++||   |+  +.+ |||+||||+|+.+     +++|+|+.|
T Consensus        11 ~~~~~~l~~g~~l~~~--~~l~S~~g~F~lgf~~~--~~~~l---y~--~~~-vvW~Anr~~p~~~~~~~~~~~l~l~~~   80 (276)
T 3m7h_A           11 GVGTSVLPAYQTLSAG--QYLLSPNQRFKLLLQGD--GNLVI---QD--NGA-TVWVANEQQPFSSTIPLRNKKAPLAFY   80 (276)
T ss_dssp             CTTSSEECTTEEBCTT--CEEECTTSSEEEEECTT--SCEEE---EE--TTE-EEEECSTTSTTEEEEECCCTTCCSEEE
T ss_pred             cccCCEecCCCEecCC--CEEEcCCCcEEEEEECC--CCeEE---EC--CCC-eEEECCCCCCcCCcccccceEEEEeCC
Confidence            4667999999999864  79999999999999943  36777   77  777 9999999999976     678999999


Q ss_pred             CceEE--EeCCCcEEEEeccc---------ccccccCCCCcEEEEecCCceeecccCCCCCcccCCcc----ccCCCeEE
Q 047157           97 GKLLL--TYFNGSVQQIYSGA---------ASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQV----LLTGKKLY  161 (788)
Q Consensus        97 G~L~l--~~~~~~~~~~~s~~---------~~~a~LldsGNlVl~~~~~~~lWqSFD~PtDtllpg~~----l~~g~~l~  161 (788)
                      |+|+|  .|.+|++.|..+..         .++|+|+|+|||||++  +.+||||  |||||+||||+    |.+|.+| 
T Consensus        81 G~Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~--~~~lWqS--~ptdtlLpg~~~~~~l~~g~~L-  155 (276)
T 3m7h_A           81 VQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD--SLALWNG--TPAIPLVPGAIDSLLLAPGSEL-  155 (276)
T ss_dssp             ESSSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE--EEEEEES--CTTSCCCCSCTTCEEECSSEEE-
T ss_pred             CcEEEEEeCCCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC--CceeeCc--ccccccccccccccccccCccc-
Confidence            99999  77777775544322         2479999999999998  7899999  99999999999    7778776 


Q ss_pred             eecCCCCCCCCCceEEeeccCCcceeeecccCCCCCcccCcccccceeeeeccceeEEEEecCCcceEEEEeeccCCCCc
Q 047157          162 SNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTED  241 (788)
Q Consensus       162 s~~~~~~dps~G~~~~~~~~~g~~~~~~~~~~~~~yw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (788)
                         ++..||++|.|+++|+++|++.+  +......||+++++......+.++..+.+.+++.++..+ ..+...  .  .
T Consensus       156 ---~S~~dps~G~fsl~l~~dGnlvL--y~~~~~~yW~Sgt~~~~~~~l~l~~dGnLvl~d~~~~~v-WsS~t~--~--~  225 (276)
T 3m7h_A          156 ---VQGVVYGAGASKLVFQGDGNLVA--YGPNGAATWNAGTQGKGAVRAVFQGDGNLVVYGAGNAVL-WHSHTG--G--H  225 (276)
T ss_dssp             ---CTTCEEEETTEEEEECTTSCEEE--ECTTSSEEEECCCTTTTCCEEEECTTSCEEEECTTSCEE-EECSCT--T--C
T ss_pred             ---ccCCCCCCceEEEeecCCceEEE--EeCCCeEEEECCCCCCccEEEEEcCCCeEEEEeCCCcEE-EEecCC--C--C
Confidence               45789999999999999997654  444456799999887654556677777777776655322 222211  1  1


Q ss_pred             eEEEEEEeCCccEEEEEeecCCCCceeEEeeccc
Q 047157          242 YYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVN  275 (788)
Q Consensus       242 ~~~rl~ld~~G~l~~~~w~~~~~~~W~~~~~~p~  275 (788)
                      ..+|++|+.||++++|.| .   ..|..++.+|+
T Consensus       226 ~~~rl~Ld~dGnLvly~~-~---~~Wqsf~~~P~  255 (276)
T 3m7h_A          226 ASAVLRLQANGSIAILDE-K---PVWARFGFQPT  255 (276)
T ss_dssp             TTCEEEECTTSCEEEEEE-E---EEEESSSCCTT
T ss_pred             CCEEEEEcCCccEEEEcC-C---CeEEccCccCC
Confidence            237999999999999998 1   45888777775

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=7.5e-40  Score=347.17  Aligned_cols=263  Identities=23%  Similarity=0.325  Sum_probs=206.9

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccc---hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD---IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ..|.+.+.||+|+||.||++...  ..+..||+|.+...   .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l   88 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDT--ILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL   88 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEET--TTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred             ccEEEEEEEccCCCEEEEEEEEC--CCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence            35677899999999999999876  66779999987432   24556789999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++.
T Consensus        89 v~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~-----~~~~~kl~Dfg~~~  159 (294)
T 4eqm_A           89 VMEYIEGPTLSEYIESH-GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILID-----SNKTLKIFDFGIAK  159 (294)
T ss_dssp             EEECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC-----TTSCEEECCCSSST
T ss_pred             EEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEC-----CCCCEEEEeCCCcc
Confidence            99999999999999655 4689999999999999999999999   999999999999998     78899999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ..............||+.|+|||.+.+..++.++||||||+++|||++|+.||........           ..... ..
T Consensus       160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-----------~~~~~-~~  227 (294)
T 4eqm_A          160 ALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI-----------AIKHI-QD  227 (294)
T ss_dssp             TC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH-----------HHHHH-SS
T ss_pred             ccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-----------HHHHh-hc
Confidence            7755444444456789999999999999999999999999999999999999976532111           00111 11


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-CHHHHHHHhhcCcCCC
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-SMKKVIHMLEGTLEVG  778 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~evl~~L~~~~~~~  778 (788)
                      .......     .......+.+.+++.+||+.||++|| +++++.+.|+..+.-.
T Consensus       228 ~~~~~~~-----~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~  277 (294)
T 4eqm_A          228 SVPNVTT-----DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN  277 (294)
T ss_dssp             CCCCHHH-----HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred             cCCCcch-----hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence            1110000     00112345688899999999999998 9999999999876543

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=5.3e-40  Score=353.43  Aligned_cols=247  Identities=22%  Similarity=0.320  Sum_probs=204.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .|.+.+.||+|+||.||+|.+.  .++..||||++...  .....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus        16 ~y~~~~~lG~G~~g~V~~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           16 NYRLLKTIGKGNFAKVKLARHI--LTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CEEEEEEEeeCCCEEEEEEEEC--CCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            4667799999999999999886  67779999998654  2445678899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++...
T Consensus        94 e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~-----~~~~~kl~DFG~a~~~  164 (328)
T 3fe3_A           94 EYASGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLD-----ADMNIKIADFGFSNEF  164 (328)
T ss_dssp             CCCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC-----TTSCEEECSTTCCGGG
T ss_pred             ECCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEc-----CCCCEEEeeccCceec
Confidence            999999999999665 5688999999999999999999999   999999999999998     7889999999999876


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCC-ccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVT-TKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ....  ......||+.|+|||++.+..++ +++||||||+++|||++|+.||......+.            ......+.
T Consensus       165 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~------------~~~i~~~~  230 (328)
T 3fe3_A          165 TVGG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL------------RERVLRGK  230 (328)
T ss_dssp             SSSC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHHHCC
T ss_pred             CCCC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHH------------HHHHHhCC
Confidence            5432  23446799999999999888775 799999999999999999999976532211            11111111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ..        .  +......+.+++.+||+.||++|||++|++++
T Consensus       231 ~~--------~--p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          231 YR--------I--PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             CC--------C--CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             CC--------C--CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            10        0  11123567789999999999999999999874

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=4.4e-40  Score=353.75  Aligned_cols=273  Identities=23%  Similarity=0.280  Sum_probs=207.0

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCC----eEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED----KRL  563 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~~~  563 (788)
                      ..|.+.++||+|+||+||+|...    +..||||++.... .....+..|+.++++++||||+++++++.+..    ..+
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~----~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   98 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLL----NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW   98 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEET----TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             hhchhhheecccCceEEEEEEEC----CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence            34667799999999999999763    5699999997543 33445667999999999999999999998744    479


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhc-------cCCceEecCCCCCcEEeccCCCCCCCcEE
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE-------CETQIIHCDIKPQNVLLDLKTLDTNYMAK  636 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-------~~~~ivH~dlkp~NIll~~~~~~~~~~~k  636 (788)
                      +||||+++|+|.+++...  .+++..++.++.||+.||.|||+.       +..+|+||||||+|||++     .++.+|
T Consensus        99 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~-----~~~~~k  171 (322)
T 3soc_A           99 LITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLK-----NNLTAC  171 (322)
T ss_dssp             EEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEEC-----TTCCEE
T ss_pred             EEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEEC-----CCCeEE
Confidence            999999999999999653  589999999999999999999985       234899999999999998     788999


Q ss_pred             EeecCCccccCCCCCc-ccccccCCccccCcccccC-----CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccc-
Q 047157          637 ISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRN-----VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEV-  709 (788)
Q Consensus       637 L~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~-  709 (788)
                      |+|||+++........ ......||+.|+|||++.+     ..++.++||||||+++|||++|+.||............ 
T Consensus       172 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~  251 (322)
T 3soc_A          172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE  251 (322)
T ss_dssp             ECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHH
T ss_pred             EccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhh
Confidence            9999999876543322 2233578999999999976     45677899999999999999999999764332211100 


Q ss_pred             ----hhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          710 ----DIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       710 ----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                          ......+. ...........   ...........+.+.+++.+||+.||++|||++||++.|+++.+
T Consensus       252 ~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          252 EIGQHPSLEDMQ-EVVVHKKKRPV---LRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             HHCSSCCHHHHH-HHHTTSCCCCC---CCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhccCCchhhhh-hhhhcccCCCC---ccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence                00011111 11111111110   11111233456779999999999999999999999999987653

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=1.5e-40  Score=364.48  Aligned_cols=262  Identities=27%  Similarity=0.480  Sum_probs=200.4

Q ss_pred             HHHHhhcccccccccccceEEEEEEecc-Ccceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      +....+.+.+.||+|+||.||+|.+... ..+..||||.+... .....+.+.+|++++++++||||+++++++.+.+..
T Consensus        42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  121 (373)
T 2qol_A           42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV  121 (373)
T ss_dssp             CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence            3345677789999999999999987522 34668999998754 344567899999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||+++++|.+++...+..+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+
T Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~-----~~~~~kl~Dfg~  193 (373)
T 2qol_A          122 MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILIN-----SNLVCKVSDFGL  193 (373)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC-----TTCCEEECCC--
T ss_pred             EEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEc-----CCCCEEECcCcc
Confidence            999999999999999987777899999999999999999999999   999999999999998     788999999999


Q ss_pred             ccccCCCCCcc--cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHH
Q 047157          643 SKLLNKDQTRT--DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVIS  719 (788)
Q Consensus       643 a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~  719 (788)
                      +..........  .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+.        .    .
T Consensus       194 a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~--------~----~  261 (373)
T 2qol_A          194 GRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV--------I----K  261 (373)
T ss_dssp             --------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHH--------H----H
T ss_pred             ccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH--------H----H
Confidence            98765433221  112335678999999999999999999999999999998 9999965432111        0    1


Q ss_pred             HhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          720 CMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       720 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ....+.         ...........+.+++.+||+.||++||+++||+++|+++.
T Consensus       262 ~i~~~~---------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~  308 (373)
T 2qol_A          262 AVDEGY---------RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI  308 (373)
T ss_dssp             HHHTTE---------ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHcCC---------CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence            111110         00111123467889999999999999999999999998764

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=2.9e-40  Score=375.68  Aligned_cols=259  Identities=26%  Similarity=0.418  Sum_probs=213.4

Q ss_pred             HHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ....+.+.+.||+|+||.||+|.+.  ..+..||||.+.... ...++|.+|++++++++||||+++++++.+.+..++|
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv  294 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWK--KYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII  294 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEG--GGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEc--CCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence            3445777899999999999999986  567799999997643 3457899999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          566 YELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |||+++|+|.+++... ...+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+++
T Consensus       295 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~-----~~~~~kl~DFG~a~  366 (495)
T 1opk_A          295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVG-----ENHLVKVADFGLSR  366 (495)
T ss_dssp             EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----GGGCEEECCTTCEE
T ss_pred             EEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEEC-----CCCcEEEeecccce
Confidence            9999999999999764 35689999999999999999999999   999999999999998     78899999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ..............++..|+|||.+....++.++||||||+++|||++ |+.||......+.        ..    .+..
T Consensus       367 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~--------~~----~~~~  434 (495)
T 1opk_A          367 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV--------YE----LLEK  434 (495)
T ss_dssp             CCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--------HH----HHHT
T ss_pred             eccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHH--------HH----HHHc
Confidence            775443333334456789999999998899999999999999999999 9999976532211        01    1111


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      .         ..........+.+.+|+.+||+.||++|||+++|++.|+.+..
T Consensus       435 ~---------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          435 D---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             T---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             C---------CCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence            0         1111112234678889999999999999999999999998764

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=9.7e-41  Score=366.84  Aligned_cols=257  Identities=25%  Similarity=0.372  Sum_probs=208.5

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ..+.+.+.||+|+||.||+|.+.  .++..||||.+.... ....+++.+|++++++++||||+++++++.+.+..++||
T Consensus       114 ~~~~~~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  191 (377)
T 3cbl_A          114 EDLVLGEQIGRGNFGEVFSGRLR--ADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM  191 (377)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET--TTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             HHeEEeeEeccCCCCeEEEEEEe--cCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence            45667899999999999999986  567799999987543 344567899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++...+..+++..++.++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||+++..
T Consensus       192 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~-----~~~~~kl~DfG~s~~~  263 (377)
T 3cbl_A          192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVT-----EKNVLKISDFGMSREE  263 (377)
T ss_dssp             ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----TTCCEEECCGGGCEEC
T ss_pred             EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEc-----CCCcEEECcCCCceec
Confidence            99999999999987767789999999999999999999999   999999999999998     7889999999999865


Q ss_pred             CCCCCccc-ccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          647 NKDQTRTD-TNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       647 ~~~~~~~~-~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ........ ....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+.            ......+
T Consensus       264 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~------------~~~~~~~  331 (377)
T 3cbl_A          264 ADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT------------REFVEKG  331 (377)
T ss_dssp             TTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH------------HHHHHTT
T ss_pred             CCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH------------HHHHHcC
Confidence            43221111 11235678999999998899999999999999999998 9999975432111            0111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      .         ....+....+.+.+++.+||+.||++|||+++|++.|+.+.
T Consensus       332 ~---------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~  373 (377)
T 3cbl_A          332 G---------RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR  373 (377)
T ss_dssp             C---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             C---------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            0         00111123456788999999999999999999999998764

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=3e-40  Score=347.87  Aligned_cols=259  Identities=22%  Similarity=0.346  Sum_probs=198.0

Q ss_pred             HHhhcccccccccccceEEEEEEecc-Ccceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ...|.+.+.||+|+||.||+|.+... ..+..||+|.+... .....+.+.+|+.++++++||||+++++++. ++..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l   92 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   92 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence            45677889999999999999988632 23567999998653 3445678999999999999999999999984 567899


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++++|.+++......+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++.
T Consensus        93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~-----~~~~~kl~Dfg~~~  164 (281)
T 1mp8_A           93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVS-----SNDCVKLGDFGLSR  164 (281)
T ss_dssp             EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEE-----ETTEEEECC-----
T ss_pred             EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEEC-----CCCCEEECcccccc
Confidence            9999999999999987767799999999999999999999999   999999999999998     77899999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ..............+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+..            .....
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~------------~~i~~  232 (281)
T 1mp8_A          165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI------------GRIEN  232 (281)
T ss_dssp             --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH------------HHHHT
T ss_pred             ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHH------------HHHHc
Confidence            765543333334456789999999998899999999999999999996 99999764322110            01111


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      .....         ........+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus       233 ~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  275 (281)
T 1mp8_A          233 GERLP---------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  275 (281)
T ss_dssp             TCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCC---------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            11000         11123456788999999999999999999999998764

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=7e-39  Score=341.83  Aligned_cols=280  Identities=37%  Similarity=0.573  Sum_probs=223.3

Q ss_pred             CCcccCHHHHHHHhhccc--------ccccccccceEEEEEEeccCcceeeeeeecccc----hHHHHHHHHHHHHHhcC
Q 047157          476 NFREFTFQELQEATKGFS--------KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD----IEKTNEEFMTELKIIGR  543 (788)
Q Consensus       476 ~~~~~~~~~l~~~t~~~~--------~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~----~~~~~~~~~~E~~~l~~  543 (788)
                      ....|++.++.+++.+|.        +.||+|+||.||+|..    .+..||||.+...    .....+.+.+|++++++
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~   86 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV----NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAK   86 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES----SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE----CCceEEEEEEecccCcchHHHHHHHHHHHHHHHh
Confidence            567899999999999886        4599999999999975    3568999988643    23456789999999999


Q ss_pred             CCccccceEeeEEecCCeEEEEEecCCCCCHhHhhhcc--CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCc
Q 047157          544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHE--GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQN  621 (788)
Q Consensus       544 l~hpniv~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~N  621 (788)
                      ++||||+++++++.+.+..++||||+++++|.+++...  ...+++..++.++.||+.||.|||++   +|+||||||+|
T Consensus        87 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~N  163 (307)
T 2nru_A           87 CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSAN  163 (307)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGG
T ss_pred             cCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHH
Confidence            99999999999999999999999999999999998643  35689999999999999999999999   99999999999


Q ss_pred             EEeccCCCCCCCcEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCcc
Q 047157          622 VLLDLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELS  700 (788)
Q Consensus       622 Ill~~~~~~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~  700 (788)
                      |+++     .++.+||+|||++......... ......|++.|+|||.+.+ .++.++||||||+++|+|++|+.||...
T Consensus       164 ili~-----~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~  237 (307)
T 2nru_A          164 ILLD-----EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEH  237 (307)
T ss_dssp             EEEC-----TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTT
T ss_pred             EEEc-----CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccC
Confidence            9998     7889999999999876543322 2334578999999998875 5889999999999999999999999765


Q ss_pred             ccccccccchhhhHHHHHHH-hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          701 RVEEESEEVDIVLSDWVISC-MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       701 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ........       +.... .....+...+.... ........+.+.+++.+||+.||++|||+++|+++|+++..
T Consensus       238 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          238 REPQLLLD-------IKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             BSSSBTTH-------HHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             cchHHHHH-------HHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence            43221111       11000 01111222222211 12345667889999999999999999999999999988653

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=4.3e-40  Score=346.92  Aligned_cols=256  Identities=26%  Similarity=0.420  Sum_probs=206.9

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ...|.+.+.||+|+||.||++.+.   ++..||+|.+..... ..+++.+|++++++++||||+++++++.+.+..++||
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   98 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWR---GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT   98 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEET---TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEc---CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence            445677899999999999999874   566899999975432 3467899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++......+++..++.++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++...
T Consensus        99 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~-----~~~~~kl~Dfg~~~~~  170 (283)
T 3gen_A           99 EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVN-----DQGVVKVSDFGLSRYV  170 (283)
T ss_dssp             CCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEEC-----TTSCEEECSTTGGGGB
T ss_pred             eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEc-----CCCCEEEccccccccc
Confidence            99999999999987667799999999999999999999999   999999999999998     7889999999999876


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ............+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+..            .......
T Consensus       171 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~------------~~~~~~~  238 (283)
T 3gen_A          171 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA------------EHIAQGL  238 (283)
T ss_dssp             CCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH------------HHHHTTC
T ss_pred             cccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHH------------HHHhccc
Confidence            5433333334456788999999998899999999999999999998 99999754322110            1111110


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                               .........+.+.+++.+||+.||++|||++|++++|+++.
T Consensus       239 ---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~  279 (283)
T 3gen_A          239 ---------RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM  279 (283)
T ss_dssp             ---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---------CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence                     00011112356888999999999999999999999998764

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-39  Score=350.17  Aligned_cols=253  Identities=16%  Similarity=0.187  Sum_probs=206.4

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .|.+.+.||+|+||+||++...  .++..+|+|.+... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus         6 ~y~~~~~lG~G~~g~Vy~~~~~--~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            6 KYMIAEDLGRGEFGIVHRCVET--SSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ceEeeeEEecCCCeEEEEEEEC--CCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            4677899999999999999886  67789999998754 33456788999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++++|.+++......+++..+..++.||+.||.|||++   +|+||||||+|||++..   .++.+||+|||++.....
T Consensus        83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~---~~~~~kl~Dfg~a~~~~~  156 (321)
T 1tki_A           83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTR---RSSTIKIIEFGQARQLKP  156 (321)
T ss_dssp             CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSS---SCCCEEECCCTTCEECCT
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccC---CCCCEEEEECCCCeECCC
Confidence            999999999977767899999999999999999999999   99999999999999831   268999999999987654


Q ss_pred             CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      ...  .....||+.|+|||++.+..++.++||||||+++|+|++|+.||......+..            ......... 
T Consensus       157 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~------------~~i~~~~~~-  221 (321)
T 1tki_A          157 GDN--FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII------------ENIMNAEYT-  221 (321)
T ss_dssp             TCE--EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH------------HHHHHTCCC-
T ss_pred             CCc--cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHH------------HHHHcCCCC-
Confidence            332  23456899999999999988999999999999999999999999764322110            111111100 


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                           ...........++.+++.+||+.||++|||+.|++++
T Consensus       222 -----~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          222 -----FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             -----CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             -----CChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence                 0000001224578899999999999999999999973

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=2.6e-39  Score=348.99  Aligned_cols=248  Identities=26%  Similarity=0.297  Sum_probs=204.0

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||+||++..+  .++..||+|.+.+..   ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus         6 ~y~~~~~lG~G~fg~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            6 DFDYLKLLGKGTFGKVILVREK--ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HeEEEEEEecCCCeEEEEEEEC--CCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            4667899999999999999886  677899999997542   23456788999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++|+|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+++.
T Consensus        84 ~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~-----~~g~vkL~DFG~a~~  154 (337)
T 1o6l_A           84 MEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLD-----KDGHIKITDFGLCKE  154 (337)
T ss_dssp             EECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEEC-----TTSCEEECCCTTCBC
T ss_pred             EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEEC-----CCCCEEEeeccchhh
Confidence            9999999999998654 5688999999999999999999999   999999999999998     788999999999986


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||........            ........
T Consensus       155 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~------------~~~i~~~~  221 (337)
T 1o6l_A          155 GISDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL------------FELILMEE  221 (337)
T ss_dssp             SCCTTC-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHHHCC
T ss_pred             cccCCC-cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHH------------HHHHHcCC
Confidence            433222 23346799999999999999999999999999999999999999975432111            11111111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIHM  770 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~  770 (788)
                      .        ..  +......+.+++.+||+.||++||     +++||+++
T Consensus       222 ~--------~~--p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          222 I--------RF--PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             C--------CC--CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             C--------CC--CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence            1        00  112245678899999999999999     89999864

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=4.5e-40  Score=354.41  Aligned_cols=259  Identities=25%  Similarity=0.409  Sum_probs=202.7

Q ss_pred             HHhhcccccccccccceEEEEEEeccCc--ceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDT--QIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      ...|.+.+.||+|+||+||+|.+...+.  ..+||+|.+.... ....+++.+|+.++++++||||+++++++.+.. .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~   92 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence            4457778999999999999998763222  2356888875432 345678999999999999999999999998765 78


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +|+||+++|+|.+++......+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++
T Consensus        93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~-----~~~~~kl~Dfg~a  164 (327)
T 3poz_A           93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVK-----TPQHVKITDFGLA  164 (327)
T ss_dssp             EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE-----ETTEEEECCTTHH
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEEC-----CCCCEEEccCcce
Confidence            99999999999999988778899999999999999999999999   999999999999998     7789999999999


Q ss_pred             cccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHh
Q 047157          644 KLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       644 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      +........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+.        ..    ..
T Consensus       165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--------~~----~~  232 (327)
T 3poz_A          165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--------SS----IL  232 (327)
T ss_dssp             HHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--------HH----HH
T ss_pred             eEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH--------HH----HH
Confidence            876543322 2223456889999999999999999999999999999999 9999976532221        01    01


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ...         ............+.+++.+||+.||++|||++|++++|+.+.
T Consensus       233 ~~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  277 (327)
T 3poz_A          233 EKG---------ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             HTT---------CCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred             HcC---------CCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            111         011111123456888999999999999999999999997654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=4.8e-40  Score=359.87  Aligned_cols=263  Identities=26%  Similarity=0.378  Sum_probs=208.5

Q ss_pred             HHhhcccccccccccceEEEEEEec---cCcceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      ...+.+.+.||+|+||+||+|.+..   ...+..||||++... .......+.+|+.++++++||||+++++++.+....
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            4567788999999999999998642   245678999998643 344556889999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccC------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEE
Q 047157          563 LLVYELMPNGTLSNFLFHEG------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAK  636 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~k  636 (788)
                      ++||||+++|+|.+++....      ..+++..++.++.||+.||.|||++   +|+||||||+|||++..+  .+..+|
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~--~~~~~k  224 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG--PGRVAK  224 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSS--TTCCEE
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCC--CCceEE
Confidence            99999999999999997543      4588999999999999999999999   999999999999998443  445699


Q ss_pred             EeecCCccccCCCC-CcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhH
Q 047157          637 ISDFGISKLLNKDQ-TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLS  714 (788)
Q Consensus       637 L~Dfg~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~  714 (788)
                      |+|||+++...... ........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+.         
T Consensus       225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~---------  295 (367)
T 3l9p_A          225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV---------  295 (367)
T ss_dssp             ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH---------
T ss_pred             ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH---------
Confidence            99999997553221 122233567899999999999999999999999999999998 9999976432211         


Q ss_pred             HHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          715 DWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       715 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                         .........         ..........+.+++.+||+.||++|||+.||+++|+.+.
T Consensus       296 ---~~~i~~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~  344 (367)
T 3l9p_A          296 ---LEFVTSGGR---------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  344 (367)
T ss_dssp             ---HHHHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---HHHHHcCCC---------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence               111111110         0011122456788999999999999999999999997654

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=7.3e-40  Score=346.00  Aligned_cols=259  Identities=26%  Similarity=0.424  Sum_probs=214.0

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      +....+.+.+.||+|+||+||+|.+.  ..+..||+|.+... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus        10 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   86 (288)
T 3kfa_A           10 MERTDITMKHKLGGGQYGEVYEGVWK--KYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI   86 (288)
T ss_dssp             CCGGGEEEEEESGGGTTCSEEEEEEG--GGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred             ccccceeEEeecCCCCceeEEEeEec--CCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence            44556778899999999999999986  66789999998754 3345788999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          565 VYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      ||||+++++|.+++... ...+++..++.++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++
T Consensus        87 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~-----~~~~~~l~Dfg~~  158 (288)
T 3kfa_A           87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVG-----ENHLVKVADFGLS  158 (288)
T ss_dssp             EEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEEC-----GGGCEEECCCCGG
T ss_pred             EEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEc-----CCCCEEEccCccc
Confidence            99999999999999764 35589999999999999999999999   999999999999998     7789999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ...............+++.|+|||.+.+..++.++||||||+++|+|++ |..||.........        .    ...
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~--------~----~~~  226 (288)
T 3kfa_A          159 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY--------E----LLE  226 (288)
T ss_dssp             GTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH--------H----HHH
T ss_pred             eeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH--------H----HHh
Confidence            8776555444444567889999999998899999999999999999999 99999764322110        0    010


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ..         ..........+.+.+++.+||+.||++|||++|+++.|+.+.
T Consensus       227 ~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~  270 (288)
T 3kfa_A          227 KD---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  270 (288)
T ss_dssp             TT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cc---------CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence            00         011111123467889999999999999999999999998654

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=2.9e-40  Score=349.26  Aligned_cols=267  Identities=24%  Similarity=0.363  Sum_probs=205.9

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCc-----ceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecC
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDT-----QIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE  559 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~-----~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  559 (788)
                      +....|.+.+.||+|+||+||+|.....+.     ...||+|.+........+.+.+|++++++++||||+++++++.+.
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   84 (289)
T 4fvq_A            5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG   84 (289)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred             echhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence            344567788999999999999998873322     257999999877667778899999999999999999999999999


Q ss_pred             CeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCC---CCCCcEE
Q 047157          560 DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL---DTNYMAK  636 (788)
Q Consensus       560 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~---~~~~~~k  636 (788)
                      +..++||||+++++|.+++......+++..++.++.||+.||.|||++   +|+||||||+|||++....   .....+|
T Consensus        85 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~k  161 (289)
T 4fvq_A           85 DENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIK  161 (289)
T ss_dssp             TCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred             CCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceee
Confidence            999999999999999999987766699999999999999999999999   9999999999999983221   0111299


Q ss_pred             EeecCCccccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHH
Q 047157          637 ISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSD  715 (788)
Q Consensus       637 L~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~  715 (788)
                      |+|||++......     ....+++.|+|||.+.+ ..++.++||||||+++|||++|..|+........       ...
T Consensus       162 l~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~-------~~~  229 (289)
T 4fvq_A          162 LSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR-------KLQ  229 (289)
T ss_dssp             ECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-------HHH
T ss_pred             eccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH-------HHH
Confidence            9999998754322     22457889999999987 7799999999999999999996655432211100       000


Q ss_pred             HHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCCCCCC
Q 047157          716 WVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMPP  781 (788)
Q Consensus       716 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~~~pp  781 (788)
                         ..........            .....+.+++.+||+.||++|||++|+++.|+++.....++
T Consensus       230 ---~~~~~~~~~~------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~  280 (289)
T 4fvq_A          230 ---FYEDRHQLPA------------PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP  280 (289)
T ss_dssp             ---HHHTTCCCCC------------CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC------
T ss_pred             ---HhhccCCCCC------------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCC
Confidence               0000000000            01235678999999999999999999999999988755444

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=7.7e-39  Score=343.58  Aligned_cols=276  Identities=21%  Similarity=0.269  Sum_probs=210.7

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCC--eEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED--KRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lV  565 (788)
                      .|.+.++||+|+||+||+|...  .++..||||++.... ....+.+.+|++++++++||||+++++++....  ..++|
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A           10 LWLLSDILGQGATANVFRGRHK--KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             EEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CEEEEEEecCCCCeEEEEEEEC--CCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence            4667899999999999999886  567799999987543 334567889999999999999999999988765  78999


Q ss_pred             EecCCCCCHhHhhhccCC--CCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          566 YELMPNGTLSNFLFHEGQ--RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      |||+++++|.+++.....  .+++..++.++.||+.||.|||++   +|+||||||+|||+.... ...+.+||+|||++
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~-~~~~~~kL~Dfg~a  163 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGE-DGQSVYKLTDFGAA  163 (319)
T ss_dssp             EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECT-TSCEEEEECCCTTC
T ss_pred             EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccC-CCCceEEEccCCCc
Confidence            999999999999976433  389999999999999999999999   999999999999982111 16778999999999


Q ss_pred             cccCCCCCcccccccCCccccCccccc--------CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHH
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLR--------NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSD  715 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~  715 (788)
                      ........  .....||+.|+|||++.        +..++.++||||||+++|||++|+.||...........   ....
T Consensus       164 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~---~~~~  238 (319)
T 4euu_A          164 RELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKE---VMYK  238 (319)
T ss_dssp             EECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHH---HHHH
T ss_pred             eecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHH---HHHH
Confidence            87654332  22356899999999986        57889999999999999999999999975432221111   1111


Q ss_pred             HHHHHhhcccccccc-----------cCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          716 WVISCMLSRNLQVLV-----------SHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       716 ~~~~~~~~~~~~~l~-----------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                       ..............           ...............+.+++.+||+.||++|||++|+++......-
T Consensus       239 -~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~  309 (319)
T 4euu_A          239 -IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (319)
T ss_dssp             -HHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred             -HhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence             11111111111000           0011112345667788999999999999999999999999976543

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=5.1e-40  Score=358.79  Aligned_cols=263  Identities=27%  Similarity=0.398  Sum_probs=208.8

Q ss_pred             HHHhhcccccccccccceEEEEEEe---ccCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecCC
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEED  560 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~---~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~  560 (788)
                      ....|.+.+.||+|+||.||+|.+.   ...++..||||++.... ....+.+.+|++++.++ +||||+++++++.+.+
T Consensus        20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~   99 (359)
T 3vhe_A           20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   99 (359)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence            3456777899999999999999864   23566799999997543 34457899999999999 7999999999998755


Q ss_pred             -eEEEEEecCCCCCHhHhhhccCC--------------------------------------------------------
Q 047157          561 -KRLLVYELMPNGTLSNFLFHEGQ--------------------------------------------------------  583 (788)
Q Consensus       561 -~~~lV~e~~~~gsL~~~l~~~~~--------------------------------------------------------  583 (788)
                       ..++||||+++|+|.+++.....                                                        
T Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (359)
T 3vhe_A          100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE  179 (359)
T ss_dssp             SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred             CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence             48999999999999999976432                                                        


Q ss_pred             ---------CCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCC-cc
Q 047157          584 ---------RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT-RT  653 (788)
Q Consensus       584 ---------~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~  653 (788)
                               .+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++........ ..
T Consensus       180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~-----~~~~~kl~Dfg~a~~~~~~~~~~~  251 (359)
T 3vhe_A          180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLS-----EKNVVKICDFGLARDIYKDPDYVR  251 (359)
T ss_dssp             ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC-----GGGCEEECCCGGGSCTTSCTTCEE
T ss_pred             ccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEc-----CCCcEEEEeccceeeecccccchh
Confidence                     178999999999999999999999   999999999999998     778999999999987644332 22


Q ss_pred             cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcccccccccC
Q 047157          654 DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSH  732 (788)
Q Consensus       654 ~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  732 (788)
                      .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+.           ............    
T Consensus       252 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-----------~~~~~~~~~~~~----  316 (359)
T 3vhe_A          252 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----------FCRRLKEGTRMR----  316 (359)
T ss_dssp             C--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-----------HHHHHHHTCCCC----
T ss_pred             ccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-----------HHHHHHcCCCCC----
Confidence            334568899999999999999999999999999999998 9999976432211           011111111000    


Q ss_pred             CCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          733 DPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       733 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                           ........+.+++..||+.||++|||++||+++|+++++
T Consensus       317 -----~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  355 (359)
T 3vhe_A          317 -----APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  355 (359)
T ss_dssp             -----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -----CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence                 011123568889999999999999999999999987653

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=4.6e-39  Score=353.47  Aligned_cols=254  Identities=20%  Similarity=0.271  Sum_probs=208.4

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .|.+.+.||+|+||.||+|...  .++..||+|.+..........+.+|++++++++||||+++++++.+....++||||
T Consensus        52 ~y~i~~~LG~G~~g~Vy~~~~~--~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           52 YYDILEELGSGAFGVVHRCVEK--ATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ceEEEEEEecCCCEEEEEEEEC--CCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            4777899999999999999886  66779999999776555667899999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++++|.+++......+++..+..++.||+.||.|||++   +|+||||||+|||++..   ..+.+||+|||++.....
T Consensus       130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~---~~~~vkL~DFG~a~~~~~  203 (387)
T 1kob_A          130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETK---KASSVKIIDFGLATKLNP  203 (387)
T ss_dssp             CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESST---TCCCEEECCCTTCEECCT
T ss_pred             CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecC---CCCceEEEecccceecCC
Confidence            999999999977767889999999999999999999999   99999999999999732   346799999999987654


Q ss_pred             CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      ...  .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+.        .    ......... 
T Consensus       204 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~--------~----~~i~~~~~~-  268 (387)
T 1kob_A          204 DEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET--------L----QNVKRCDWE-  268 (387)
T ss_dssp             TSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH--------H----HHHHHCCCC-
T ss_pred             Ccc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHH--------H----HHHHhCCCC-
Confidence            332  2234689999999999999999999999999999999999999976432111        0    011111100 


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .   ...  ........+.+++.+||+.||++|||++|++++
T Consensus       269 ~---~~~--~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          269 F---DED--AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             C---CSS--TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             C---Ccc--ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence            0   000  011234567899999999999999999999974

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=2.6e-39  Score=351.93  Aligned_cols=257  Identities=23%  Similarity=0.294  Sum_probs=205.1

Q ss_pred             HHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchH-----HHHHHHHHHHHHhcCCCccccceEeeEEecCC
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE-----KTNEEFMTELKIIGRTHHKNLVRLLGFCSEED  560 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  560 (788)
                      ....|.+.+.||+|+||+||+|...  .++..||||.+.....     ...+.+.+|++++++++||||+++++++.+.+
T Consensus        22 ~~~~y~~~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~   99 (351)
T 3c0i_A           22 FEDVYELCEVIGKGPFSVVRRCINR--ETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG   99 (351)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             cccceEEeeEEeeCCCEEEEEEEEC--CCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            3456888999999999999999886  6677999999864321     13567899999999999999999999999999


Q ss_pred             eEEEEEecCCCCCHhHhhhcc---CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          561 KRLLVYELMPNGTLSNFLFHE---GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                      ..++||||+++++|.+++...   +..+++..+..++.||+.||.|||++   +|+||||||+|||++.+.  ....+||
T Consensus       100 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~--~~~~vkl  174 (351)
T 3c0i_A          100 MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKE--NSAPVKL  174 (351)
T ss_dssp             EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSS--TTCCEEE
T ss_pred             EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCC--CCCcEEE
Confidence            999999999999999888543   34589999999999999999999999   999999999999998433  3456999


Q ss_pred             eecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHH
Q 047157          638 SDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV  717 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~  717 (788)
                      +|||++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||......             .
T Consensus       175 ~Dfg~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------------~  240 (351)
T 3c0i_A          175 GGFGVAIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER-------------L  240 (351)
T ss_dssp             CCCTTCEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH-------------H
T ss_pred             ecCcceeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH-------------H
Confidence            99999987654322 223457999999999999999999999999999999999999999754210             0


Q ss_pred             HHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       718 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ...........    .+  .......+.+.+++.+||+.||++|||+.|+++
T Consensus       241 ~~~i~~~~~~~----~~--~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          241 FEGIIKGKYKM----NP--RQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             HHHHHHTCCCC----CH--HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHcCCCCC----Cc--cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            01111111000    00  000112457888999999999999999999986

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=8.3e-39  Score=357.50  Aligned_cols=257  Identities=20%  Similarity=0.250  Sum_probs=206.3

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ...|.+.+.||+|+||+||++...  .++..+|+|.+....  ....+.+.+|++++++++||||+++++++.+++..++
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~--~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l   87 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKV--LAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL   87 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEET--TTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEEC--CCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence            456888899999999999999886  677899999886432  3455678999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++|+|.+.+... ..+++..+..++.||+.||.|||++   +|+||||||+|||++...  .++.+||+|||++.
T Consensus        88 v~E~~~gg~L~~~i~~~-~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~--~~~~vkL~DFG~a~  161 (444)
T 3soa_A           88 IFDLVTGGELFEDIVAR-EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKL--KGAAVKLADFGLAI  161 (444)
T ss_dssp             EECCCBCCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSS--TTCCEEECCCSSCB
T ss_pred             EEEeCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccC--CCCcEEEccCceeE
Confidence            99999999999999665 5689999999999999999999999   999999999999998543  45789999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ....... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||......+.            ......+
T Consensus       162 ~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~------------~~~i~~~  228 (444)
T 3soa_A          162 EVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRL------------YQQIKAG  228 (444)
T ss_dssp             CCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH------------HHHHHHT
T ss_pred             EecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHH------------HHHHHhC
Confidence            7654332 22346799999999999999999999999999999999999999975432111            1111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .....   .+   ......+.+.+++.+||+.||++|||+.|++++
T Consensus       229 ~~~~~---~~---~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h  268 (444)
T 3soa_A          229 AYDFP---SP---EWDTVTPEAKDLINKMLTINPSKRITAAEALKH  268 (444)
T ss_dssp             CCCCC---TT---TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCCCC---cc---ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence            11100   00   001224567889999999999999999999874

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.1e-39  Score=356.98  Aligned_cols=264  Identities=28%  Similarity=0.413  Sum_probs=213.1

Q ss_pred             HHHHHhhcccccccccccceEEEEEEecc-----Ccceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEE
Q 047157          484 ELQEATKGFSKLVGTGSSGKVYRGILRLK-----DTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFC  556 (788)
Q Consensus       484 ~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~-----~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~  556 (788)
                      ++....+.+.+.||+|+||+||+|.....     ..+..||||++.... ....+.+.+|+++++++ +||||+++++++
T Consensus        65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  144 (382)
T 3tt0_A           65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC  144 (382)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence            34445677889999999999999987521     234579999986543 44557899999999999 899999999999


Q ss_pred             ecCCeEEEEEecCCCCCHhHhhhccC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCc
Q 047157          557 SEEDKRLLVYELMPNGTLSNFLFHEG---------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQN  621 (788)
Q Consensus       557 ~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~N  621 (788)
                      .+.+..++||||+++++|.+++....               ..+++..++.++.||+.||.|||++   +|+||||||+|
T Consensus       145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N  221 (382)
T 3tt0_A          145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARN  221 (382)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred             ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcce
Confidence            99999999999999999999997653               3589999999999999999999999   99999999999


Q ss_pred             EEeccCCCCCCCcEEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCc
Q 047157          622 VLLDLKTLDTNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIEL  699 (788)
Q Consensus       622 Ill~~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~  699 (788)
                      ||++     .++.+||+|||++........ .......+|+.|+|||++.+..++.++||||||+++|||++ |+.||..
T Consensus       222 Ill~-----~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~  296 (382)
T 3tt0_A          222 VLVT-----EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG  296 (382)
T ss_dssp             EEEC-----TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             EEEc-----CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence            9998     788999999999987654332 22333567889999999999999999999999999999999 9999975


Q ss_pred             cccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          700 SRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ....+            ...........         .........+.+++.+||+.||++|||++||++.|+++..
T Consensus       297 ~~~~~------------~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  352 (382)
T 3tt0_A          297 VPVEE------------LFKLLKEGHRM---------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  352 (382)
T ss_dssp             CCHHH------------HHHHHHTTCCC---------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCHHH------------HHHHHHcCCCC---------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            43221            11111111100         0111234568889999999999999999999999988764

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=9.8e-39  Score=347.74  Aligned_cols=254  Identities=21%  Similarity=0.285  Sum_probs=203.2

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHH------HHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK------TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      .|.+.+.||+|+||+||++...  .++..||+|.+......      ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus        13 ~y~~~~~LG~G~fg~V~~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           13 FYDIGEELGSGQFAIVKKCREK--STGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             ceEEeeEEeeCcCEEEEEEEEC--CCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            4677899999999999999886  66779999998754321      356889999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++..+. ....+||+|||+
T Consensus        91 ~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~-~~~~vkl~DFG~  165 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNI-PIPHIKLIDFGL  165 (361)
T ss_dssp             EEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTS-SSCCEEECCCSS
T ss_pred             EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCC-CccCEEEEecCC
Confidence            9999999999999999654 5689999999999999999999999   9999999999999973210 123799999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      +.......  ......||+.|+|||++.+..++.++||||||+++|+|++|..||......+..            ..+.
T Consensus       166 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~------------~~i~  231 (361)
T 2yab_A          166 AHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------------ANIT  231 (361)
T ss_dssp             CEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH------------HHHH
T ss_pred             ceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHH------------HHHH
Confidence            98765432  223457999999999999999999999999999999999999999764322110            0111


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .....      ..........+.+.+++..||+.||++|||++|+++
T Consensus       232 ~~~~~------~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          232 AVSYD------FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             TTCCC------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hcCCC------CCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            11000      000000112456788999999999999999999985

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=7.4e-40  Score=368.77  Aligned_cols=257  Identities=22%  Similarity=0.421  Sum_probs=208.1

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ...+.+.+.||+|+||.||+|.+.   .+..||||.+.... ...+.+.+|++++++++||||+++++++. .+..++||
T Consensus       187 ~~~~~~~~~lG~G~fg~V~~~~~~---~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~  261 (454)
T 1qcf_A          187 RESLKLEKKLGAGQFGEVWMATYN---KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT  261 (454)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEET---TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred             hHHeEEEEEcccCCceEEEEEEEC---CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence            445677899999999999999884   45689999997543 34678999999999999999999999986 56789999


Q ss_pred             ecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+++|+|.+++... ...+++..++.++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||+++.
T Consensus       262 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~-----~~~~~kl~DFG~a~~  333 (454)
T 1qcf_A          262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVS-----ASLVCKIADFGLARV  333 (454)
T ss_dssp             CCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEEC-----TTCCEEECSTTGGGG
T ss_pred             eecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEEC-----CCCcEEEeeCCCceE
Confidence            999999999999754 24678899999999999999999999   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .............++..|+|||.+....++.++||||||+++|||++ |+.||......+.        .    ..+..+
T Consensus       334 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~--------~----~~i~~~  401 (454)
T 1qcf_A          334 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV--------I----RALERG  401 (454)
T ss_dssp             BCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH--------H----HHHHHT
T ss_pred             cCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHH--------H----HHHHcC
Confidence            64432222233456788999999998899999999999999999999 9999975432111        0    111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCC
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEV  777 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~  777 (788)
                      .         ....+....+.+.+++.+||+.||++|||+++|++.|+.+...
T Consensus       402 ~---------~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          402 Y---------RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             C---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred             C---------CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence            0         0001112346788999999999999999999999999987653

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=5.6e-39  Score=339.13  Aligned_cols=258  Identities=24%  Similarity=0.409  Sum_probs=203.2

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHH-------HHHHHHHHHHHhcCCCccccceEeeEEecCC
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK-------TNEEFMTELKIIGRTHHKNLVRLLGFCSEED  560 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~-------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  560 (788)
                      ..|.+.+.||+|+||+||+|.+.  .++..||+|.+......       ..+.+.+|++++++++||||+++++++.+..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   96 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLV--KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP   96 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEET--TTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred             ccceehhccccCCceeEEEEEEc--CCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence            45677899999999999999886  56779999988543211       1167899999999999999999999987665


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCc--eEecCCCCCcEEeccCCCCCCCcEEEe
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ--IIHCDIKPQNVLLDLKTLDTNYMAKIS  638 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivH~dlkp~NIll~~~~~~~~~~~kL~  638 (788)
                        ++||||+++++|.+++......+++..++.++.|++.||.|||++   +  |+||||||+|||++..+......+||+
T Consensus        97 --~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~  171 (287)
T 4f0f_A           97 --RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVA  171 (287)
T ss_dssp             --EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred             --eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence              699999999999999988878899999999999999999999998   8  999999999999984332233449999


Q ss_pred             ecCCccccCCCCCcccccccCCccccCcccc--cCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHH
Q 047157          639 DFGISKLLNKDQTRTDTNMRGTMGYVAPEWL--RNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDW  716 (788)
Q Consensus       639 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~  716 (788)
                      |||++.....    ......||+.|+|||.+  ....++.++||||||+++|||++|+.||........      .... 
T Consensus       172 Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~------~~~~-  240 (287)
T 4f0f_A          172 DFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI------KFIN-  240 (287)
T ss_dssp             CCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH------HHHH-
T ss_pred             CCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH------HHHH-
Confidence            9999985433    22345789999999998  455678999999999999999999999975432211      0001 


Q ss_pred             HHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          717 VISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       717 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                         .........        .........+.+++.+||+.||++|||++|+++.|+++
T Consensus       241 ---~~~~~~~~~--------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          241 ---MIREEGLRP--------TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             ---HHHHSCCCC--------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             ---HHhccCCCC--------CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence               011111111        11112345788999999999999999999999999864

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=2.9e-39  Score=350.40  Aligned_cols=262  Identities=26%  Similarity=0.381  Sum_probs=210.9

Q ss_pred             HHhhcccccccccccceEEEEEEecc---Ccceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLK---DTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      ...|.+.+.||+|+||.||+|.....   ..+..||||.+.... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus        46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  125 (343)
T 1luf_A           46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM  125 (343)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred             HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence            34567789999999999999998632   345789999997543 44567899999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccC-----------------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCC
Q 047157          563 LLVYELMPNGTLSNFLFHEG-----------------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKP  619 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~-----------------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp  619 (788)
                      ++||||+++++|.+++....                       ..+++.+++.++.||++||.|||++   +|+||||||
T Consensus       126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp  202 (343)
T 1luf_A          126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLAT  202 (343)
T ss_dssp             EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred             EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCc
Confidence            99999999999999997642                       5689999999999999999999999   999999999


Q ss_pred             CcEEeccCCCCCCCcEEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCC
Q 047157          620 QNVLLDLKTLDTNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHI  697 (788)
Q Consensus       620 ~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~  697 (788)
                      +|||++     .++.+||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||
T Consensus       203 ~NIl~~-----~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~  277 (343)
T 1luf_A          203 RNCLVG-----ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY  277 (343)
T ss_dssp             GGEEEC-----GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             ceEEEC-----CCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence            999998     788999999999986543221 22233567889999999998899999999999999999999 99999


Q ss_pred             CccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCC
Q 047157          698 ELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEV  777 (788)
Q Consensus       698 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~  777 (788)
                      ......+            .......+.....         .......+.+++.+||+.||++|||+.+|+++|+++.+-
T Consensus       278 ~~~~~~~------------~~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~  336 (343)
T 1luf_A          278 YGMAHEE------------VIYYVRDGNILAC---------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER  336 (343)
T ss_dssp             TTSCHHH------------HHHHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred             CCCChHH------------HHHHHhCCCcCCC---------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence            7543211            1111111111111         112345688899999999999999999999999987653

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=5.9e-39  Score=350.25  Aligned_cols=256  Identities=21%  Similarity=0.290  Sum_probs=206.8

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ...|.+.+.||+|+||.||++...  .++..||+|.+...  .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l  105 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHK--TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL  105 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEEC--CCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            456888899999999999999886  66779999998643  23455788999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++...  .+..+||+|||++.
T Consensus       106 v~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~--~~~~~kl~DfG~a~  179 (362)
T 2bdw_A          106 VFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKA--KGAAVKLADFGLAI  179 (362)
T ss_dssp             EECCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSS--TTCCEEECCCTTCB
T ss_pred             EEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCC--CCCCEEEeecCcce
Confidence            99999999999998654 5689999999999999999999999   999999999999998433  34579999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .......  .....||+.|+|||++.+..++.++||||||+++|+|++|+.||......+.            ......+
T Consensus       180 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~------------~~~i~~~  245 (362)
T 2bdw_A          180 EVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL------------YAQIKAG  245 (362)
T ss_dssp             CCTTCCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHHHT
T ss_pred             EecCCcc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH------------HHHHHhC
Confidence            7653322  2346799999999999999999999999999999999999999975432111            1111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ....      ...........+.+++.+||+.||++|||+.|++++
T Consensus       246 ~~~~------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          246 AYDY------PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             CCCC------CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             CCCC------CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            1100      000011224567889999999999999999999864

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=3.2e-39  Score=345.45  Aligned_cols=261  Identities=25%  Similarity=0.375  Sum_probs=211.1

Q ss_pred             HHhhcccccccccccceEEEEEEec---cCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      ...|.+.+.||+|+||.||+|....   ...+..||||.+.... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            4457778999999999999998742   2345789999987543 44567899999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccC-----------------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCC
Q 047157          563 LLVYELMPNGTLSNFLFHEG-----------------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKP  619 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~-----------------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp  619 (788)
                      ++||||+++++|.+++....                       ..+++..++.++.||+.||.|||++   +|+||||||
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp  178 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA  178 (314)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred             EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence            99999999999999997643                       2378999999999999999999999   999999999


Q ss_pred             CcEEeccCCCCCCCcEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCC
Q 047157          620 QNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHI  697 (788)
Q Consensus       620 ~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~  697 (788)
                      +||+++     .++.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||
T Consensus       179 ~NIli~-----~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~  253 (314)
T 2ivs_A          179 RNILVA-----EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY  253 (314)
T ss_dssp             GGEEEE-----TTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             heEEEc-----CCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence            999998     7889999999999876543322 2233457888999999999899999999999999999999 99999


Q ss_pred             CccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          698 ELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       698 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      .........            ........         ........+.+.+++.+||+.||++|||+.|+++.|+++..
T Consensus       254 ~~~~~~~~~------------~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  311 (314)
T 2ivs_A          254 PGIPPERLF------------NLLKTGHR---------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV  311 (314)
T ss_dssp             TTCCGGGHH------------HHHHTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCHHHHH------------HHhhcCCc---------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            765322110            11111110         01111234678899999999999999999999999987653

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=7.6e-40  Score=348.37  Aligned_cols=274  Identities=22%  Similarity=0.340  Sum_probs=211.1

Q ss_pred             HHHHHhhcccccccccccceEEEEEEe--ccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecC-
Q 047157          484 ELQEATKGFSKLVGTGSSGKVYRGILR--LKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE-  559 (788)
Q Consensus       484 ~l~~~t~~~~~~lg~G~~g~Vy~~~~~--~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-  559 (788)
                      .+....+.+.+.||+|+||.||+|.+.  ....+..||+|.+.... ....+.+.+|++++++++||||+++++++.+. 
T Consensus        17 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   96 (302)
T 4e5w_A           17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG   96 (302)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--
T ss_pred             hhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC
Confidence            344555778899999999999999853  23567899999987443 33457889999999999999999999999876 


Q ss_pred             -CeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEe
Q 047157          560 -DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS  638 (788)
Q Consensus       560 -~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~  638 (788)
                       +..++||||+++++|.+++......+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+
T Consensus        97 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~-----~~~~~kl~  168 (302)
T 4e5w_A           97 GNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVE-----SEHQVKIG  168 (302)
T ss_dssp             -CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE-----ETTEEEEC
T ss_pred             CceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEc-----CCCCEEEC
Confidence             678999999999999999977777899999999999999999999999   999999999999998     77899999


Q ss_pred             ecCCccccCCCCC--cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCcccccccc----ccchhh
Q 047157          639 DFGISKLLNKDQT--RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEES----EEVDIV  712 (788)
Q Consensus       639 Dfg~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~----~~~~~~  712 (788)
                      |||++........  .......+|..|+|||.+.+..++.++||||||+++|||++|+.|+.........    ......
T Consensus       169 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  248 (302)
T 4e5w_A          169 DFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMT  248 (302)
T ss_dssp             CCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGH
T ss_pred             cccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccC
Confidence            9999987755432  2233456788899999999999999999999999999999999987533111000    000000


Q ss_pred             hHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          713 LSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       713 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      . ..........         ..........+.+.+++.+||+.||++|||++|+++.|+.++
T Consensus       249 ~-~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          249 V-TRLVNTLKEG---------KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             H-HHHHHHHHTT---------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             H-HHHHHHHhcc---------CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            0 0011111111         111111223467889999999999999999999999998764

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=6.1e-39  Score=351.50  Aligned_cols=249  Identities=22%  Similarity=0.270  Sum_probs=199.6

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCC
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      .+.||+|+||.||+|...  .++..||+|.+........+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus        94 ~~~lG~G~~g~Vy~a~~~--~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~  171 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEET--ATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG  171 (373)
T ss_dssp             EEECC-----CEEEEEET--TTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             ceEEecCcCEEEEEEEEc--CCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence            468999999999999886  667799999998766666788999999999999999999999999999999999999999


Q ss_pred             CHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCc
Q 047157          573 TLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR  652 (788)
Q Consensus       573 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~  652 (788)
                      +|.+++......+++..+..++.||+.||.|||++   +|+||||||+|||++..   .++.+||+|||++........ 
T Consensus       172 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~---~~~~~kl~DFG~a~~~~~~~~-  244 (373)
T 2x4f_A          172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNR---DAKQIKIIDFGLARRYKPREK-  244 (373)
T ss_dssp             EEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEET---TTTEEEECCCSSCEECCTTCB-
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecC---CCCcEEEEeCCCceecCCccc-
Confidence            99999977767789999999999999999999999   99999999999999421   567899999999987654332 


Q ss_pred             ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccC
Q 047157          653 TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSH  732 (788)
Q Consensus       653 ~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  732 (788)
                       .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+.       +     ..+.....      
T Consensus       245 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-------~-----~~i~~~~~------  305 (373)
T 2x4f_A          245 -LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET-------L-----NNILACRW------  305 (373)
T ss_dssp             -CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------H-----HHHHHTCC------
T ss_pred             -cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH-------H-----HHHHhccC------
Confidence             2234689999999999999999999999999999999999999976532211       0     00111100      


Q ss_pred             CCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          733 DPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       733 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ...........+.+.+++.+||+.||++|||++|+++
T Consensus       306 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          306 DLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             CSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            0000001123467889999999999999999999987

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=8.9e-39  Score=339.33  Aligned_cols=267  Identities=17%  Similarity=0.203  Sum_probs=211.3

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ..|.+.+.||+|+||.||+|...  .++..||||.+....  ..+.+.+|+++++++ +|+|++++++++.+....++||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   85 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGTNL--LNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   85 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEET--TTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEEC--CCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence            34677899999999999999876  677899999886432  234678899999999 7999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+ +++|.+++...+..+++..+..++.||+.||.|||++   +|+||||||+|||++.++......+||+|||++...
T Consensus        86 e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~  161 (298)
T 1csn_A           86 DLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY  161 (298)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred             Eec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence            999 9999999987777899999999999999999999999   999999999999998443224455999999999876


Q ss_pred             CCCCCc------ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          647 NKDQTR------TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       647 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      ......      ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...........    . ......
T Consensus       162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~----~-~~~~~~  236 (298)
T 1csn_A          162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQK----Y-ERIGEK  236 (298)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHH----H-HHHHHH
T ss_pred             ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHH----H-HHHHhh
Confidence            543321      23346799999999999999999999999999999999999999986432211110    0 001010


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ........+.         ....+.+.+++.+||+.||++|||+++|++.|+++.+
T Consensus       237 ~~~~~~~~~~---------~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~  283 (298)
T 1csn_A          237 KQSTPLRELC---------AGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE  283 (298)
T ss_dssp             HHHSCHHHHT---------TTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             ccCccHHHHH---------hhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence            1011111110         0124578889999999999999999999999988754

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.8e-39  Score=339.00  Aligned_cols=256  Identities=25%  Similarity=0.416  Sum_probs=209.6

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      ..|.+.+.||+|+||.||++...   ++..||+|.+..... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWL---NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE   83 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET---TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred             hheeeeeEecCCCceeEEEEEec---CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence            45677899999999999999874   456899999976432 34678999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++++|.+++......+++..++.++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++....
T Consensus        84 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~-----~~~~~kl~dfg~~~~~~  155 (267)
T 3t9t_A           84 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVG-----ENQVIKVSDFGMTRFVL  155 (267)
T ss_dssp             CCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEEC-----GGGCEEECCTTGGGGBC
T ss_pred             CCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEC-----CCCCEEEcccccccccc
Confidence            9999999999987777889999999999999999999999   999999999999998     77899999999998764


Q ss_pred             CCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      ...........++..|+|||.+.+..++.++||||||+++|||++ |+.||......+.            ........ 
T Consensus       156 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~------------~~~i~~~~-  222 (267)
T 3t9t_A          156 DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV------------VEDISTGF-  222 (267)
T ss_dssp             CHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH------------HHHHHTTC-
T ss_pred             cccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHH------------HHHHhcCC-
Confidence            432222333456788999999998899999999999999999999 8999975432111            01111110 


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      .        ...+......+.+++.+||+.||++|||++|++++|+++.+
T Consensus       223 ~--------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          223 R--------LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             C--------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             c--------CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            0        00011224567889999999999999999999999988654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=1.7e-39  Score=365.49  Aligned_cols=261  Identities=25%  Similarity=0.407  Sum_probs=204.3

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ...+.+.+.||+|+||.||+|.+.   .+..||||.+.... ...++|.+|++++++++||||+++++++.+ +..++||
T Consensus       183 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~  257 (452)
T 1fmk_A          183 RESLRLEVKLGQGCFGEVWMGTWN---GTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT  257 (452)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET---TTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             hhHceeeeeecCCCCeEEEEEEEC---CCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence            345677899999999999999885   34579999997543 235689999999999999999999999876 6789999


Q ss_pred             ecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+++|+|.+++... +..+++..++.++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||+++.
T Consensus       258 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~-----~~~~~kl~DfG~a~~  329 (452)
T 1fmk_A          258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG-----ENLVCKVADFGLARL  329 (452)
T ss_dssp             CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC-----GGGCEEECCCCTTC-
T ss_pred             hhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEC-----CCCCEEECCCcccee
Confidence            999999999999753 35689999999999999999999999   999999999999998     778999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .............++..|+|||.+.+..++.++||||||+++|||++ |+.||......+.            ......+
T Consensus       330 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~------------~~~i~~~  397 (452)
T 1fmk_A          330 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV------------LDQVERG  397 (452)
T ss_dssp             -------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH------------HHHHHTT
T ss_pred             cCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHH------------HHHHHcC
Confidence            65433333333456789999999998899999999999999999999 9999975432111            1111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCCCCCC
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMPP  781 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~~~pp  781 (788)
                      .         ....+....+.+.+++.+||+.||++|||+++|++.|+.+.....|.
T Consensus       398 ~---------~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~  445 (452)
T 1fmk_A          398 Y---------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ  445 (452)
T ss_dssp             C---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCC
T ss_pred             C---------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcc
Confidence            0         00111123467888999999999999999999999999987654443

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=3.3e-39  Score=339.78  Aligned_cols=258  Identities=24%  Similarity=0.384  Sum_probs=205.3

Q ss_pred             HhhcccccccccccceEEEEEEec-cCcceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRL-KDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ..|.+.+.||+|+||+||+|.... ...+..||+|.+... .....+.+.+|++++++++||||+++++++.+ +..++|
T Consensus        12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v   90 (281)
T 3cc6_A           12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWII   90 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEE
T ss_pred             cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEE
Confidence            456678999999999999998763 234567999998754 34456789999999999999999999999865 456899


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++......+++..+..++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++..
T Consensus        91 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~-----~~~~~kl~Dfg~~~~  162 (281)
T 3cc6_A           91 MELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVA-----SPECVKLGDFGLSRY  162 (281)
T ss_dssp             EECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEE-----ETTEEEECCCCGGGC
T ss_pred             EecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEC-----CCCcEEeCccCCCcc
Confidence            999999999999987777799999999999999999999999   999999999999998     778999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .............+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+.        ...    ....
T Consensus       163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~--------~~~----~~~~  230 (281)
T 3cc6_A          163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV--------IGV----LEKG  230 (281)
T ss_dssp             C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH--------HHH----HHHT
T ss_pred             cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH--------HHH----HhcC
Confidence            65544333344567889999999998899999999999999999998 9999975432211        010    1111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ...         .......+.+.+++.+||+.||++|||+.|++++|+.+.
T Consensus       231 ~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~  272 (281)
T 3cc6_A          231 DRL---------PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY  272 (281)
T ss_dssp             CCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCC---------CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence            000         001112356888999999999999999999999998764

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=6.9e-39  Score=344.92  Aligned_cols=257  Identities=22%  Similarity=0.291  Sum_probs=204.6

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchH------HHHHHHHHHHHHhcCCCccccceEeeEEecCC
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE------KTNEEFMTELKIIGRTHHKNLVRLLGFCSEED  560 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  560 (788)
                      ...|.+.+.||+|+||.||++...  .++..||+|.+.....      ...+.+.+|++++++++||||+++++++.+.+
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   87 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREK--STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT   87 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEET--TTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             ccceEeceEEeeCCCeEEEEEEEC--CCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            356788899999999999999886  6677999998865432      13578899999999999999999999999999


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ..++||||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++..+. ....+||+||
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~-~~~~~kl~Df  162 (326)
T 2y0a_A           88 DVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNV-PKPRIKIIDF  162 (326)
T ss_dssp             EEEEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSS-SSCCEEECCC
T ss_pred             EEEEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCC-CCCCEEEEEC
Confidence            999999999999999999654 5689999999999999999999999   9999999999999983221 2238999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      |++........  .....||+.|+|||++.+..++.++||||||+++|+|++|+.||......+..            ..
T Consensus       163 g~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~------------~~  228 (326)
T 2y0a_A          163 GLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------------AN  228 (326)
T ss_dssp             TTCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH------------HH
T ss_pred             CCCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHH------------HH
Confidence            99987653322  23457899999999999999999999999999999999999999754321110            00


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .......      ............+.+++.+||+.||++|||++|++++
T Consensus       229 ~~~~~~~------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  272 (326)
T 2y0a_A          229 VSAVNYE------FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  272 (326)
T ss_dssp             HHHTCCC------CCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHhcCCC------cCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            0000000      0000001123567889999999999999999999874

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=4.4e-39  Score=342.23  Aligned_cols=261  Identities=21%  Similarity=0.319  Sum_probs=197.4

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcC--CCccccceEeeEEec----CC
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR--THHKNLVRLLGFCSE----ED  560 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~hpniv~~~~~~~~----~~  560 (788)
                      ...|.+.+.||+|+||+||+|..    ++..||||++....   .+.+..|.+++..  ++||||+++++++..    ..
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~----~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~   79 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW----QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSST   79 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE----TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE----CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence            34577789999999999999976    46689999986542   3444555555554  899999999998654    34


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhh--------hccCCceEecCCCCCcEEeccCCCCCC
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH--------EECETQIIHCDIKPQNVLLDLKTLDTN  632 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH--------~~~~~~ivH~dlkp~NIll~~~~~~~~  632 (788)
                      ..++||||+++++|.+++..  ..+++..++.++.||+.||.|||        +.   +|+||||||+|||++     .+
T Consensus        80 ~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~-----~~  149 (301)
T 3q4u_A           80 QLWLITHYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVK-----KN  149 (301)
T ss_dssp             EEEEEECCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEEC-----TT
T ss_pred             eeEEehhhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEc-----CC
Confidence            68999999999999999943  46899999999999999999999        76   999999999999998     78


Q ss_pred             CcEEEeecCCccccCCCCCcc---cccccCCccccCcccccCC------CCCccCcchhhHHHHHHHHhC----------
Q 047157          633 YMAKISDFGISKLLNKDQTRT---DTNMRGTMGYVAPEWLRNV------PVTTKVDVFSFGVMLLEIICG----------  693 (788)
Q Consensus       633 ~~~kL~Dfg~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~s~k~DVwSlGvil~elltg----------  693 (788)
                      +.+||+|||++..........   .....||+.|+|||.+.+.      .++.++||||||+++|||++|          
T Consensus       150 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~  229 (301)
T 3q4u_A          150 GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDY  229 (301)
T ss_dssp             SCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred             CCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccc
Confidence            899999999998664433221   2234789999999999876      566799999999999999999          


Q ss_pred             CCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          694 RRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       694 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                      +.||.........      ..... .........   ...+...........+.+++.+||+.||++|||++||++.|++
T Consensus       230 ~~pf~~~~~~~~~------~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~  299 (301)
T 3q4u_A          230 KPPFYDVVPNDPS------FEDMR-KVVCVDQQR---PNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK  299 (301)
T ss_dssp             CCTTTTTSCSSCC------HHHHH-HHHTTSCCC---CCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             cccccccCCCCcc------hhhhh-HHHhccCCC---CCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence            7777543221111      01111 111100000   0011111233567889999999999999999999999999986


Q ss_pred             C
Q 047157          774 T  774 (788)
Q Consensus       774 ~  774 (788)
                      +
T Consensus       300 i  300 (301)
T 3q4u_A          300 I  300 (301)
T ss_dssp             H
T ss_pred             c
Confidence            4

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=7.7e-39  Score=345.01  Aligned_cols=246  Identities=22%  Similarity=0.294  Sum_probs=201.4

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchH---HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||.||+|.+.  .++..||+|.+.....   ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus        10 ~Y~i~~~lG~G~~g~V~~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B           10 PYIIRETLGEGSFGKVKLATHY--KTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CEEEEEEEecCCCeEEEEEEEC--CCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            4677899999999999999886  6777999999875432   2245789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+ +|+|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++..
T Consensus        88 ~E~~-~g~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~-----~~~~~kl~DFG~s~~  157 (336)
T 3h4j_B           88 IEYA-GGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLD-----DNLNVKIADFGLSNI  157 (336)
T ss_dssp             ECCC-CEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEEC-----TTCCEEECCSSCTBT
T ss_pred             EECC-CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEc-----CCCCEEEEEecccee
Confidence            9999 78999988655 5689999999999999999999999   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCC-CccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ......  .....||+.|+|||.+.+..+ ++++||||||+++|+|++|+.||............               
T Consensus       158 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i---------------  220 (336)
T 3h4j_B          158 MTDGNF--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV---------------  220 (336)
T ss_dssp             TTTSBT--TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCC---------------
T ss_pred             ccCCcc--cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHH---------------
Confidence            654322  234579999999999988776 68999999999999999999999764322211110               


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                           .....  ..+......+.+++.+||+.||.+|||++|+++.
T Consensus       221 -----~~~~~--~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          221 -----NSCVY--VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             -----CSSCC--CCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             -----HcCCC--CCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence                 00000  0111224567889999999999999999999863

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=1.6e-39  Score=350.20  Aligned_cols=273  Identities=23%  Similarity=0.306  Sum_probs=214.3

Q ss_pred             HHhhcccccccccccceEEEEEEe--ccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEe--cCCeE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILR--LKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCS--EEDKR  562 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~--~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--~~~~~  562 (788)
                      ...|.+.+.||+|+||.||++.+.  ....+..||||++........+.+.+|++++++++||||+++++++.  +....
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  101 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL  101 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence            356778899999999999999853  23567799999998776777788999999999999999999999886  45678


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||+++++|.+++......+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~-----~~~~~kl~Dfg~  173 (327)
T 3lxl_A          102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVE-----SEAHVKIADFGL  173 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE-----ETTEEEECCGGG
T ss_pred             EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEEC-----CCCCEEEccccc
Confidence            999999999999999977666799999999999999999999999   999999999999998     778999999999


Q ss_pred             ccccCCCCCc--ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCcccccccccc---chhhhHHHH
Q 047157          643 SKLLNKDQTR--TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEE---VDIVLSDWV  717 (788)
Q Consensus       643 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~---~~~~~~~~~  717 (788)
                      +.........  ......++..|+|||.+.+..++.++||||||+++|+|++|+.||...........   .........
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  253 (327)
T 3lxl_A          174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL  253 (327)
T ss_dssp             CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHH
T ss_pred             ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHH
Confidence            9876543322  22335678889999999998999999999999999999999999875432211000   000000001


Q ss_pred             HHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       718 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ......         ...........+.+.+++.+||+.||++|||++|++++|+.+..
T Consensus       254 ~~~~~~---------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  303 (327)
T 3lxl_A          254 LELLEE---------GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS  303 (327)
T ss_dssp             HHHHHT---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred             HHHhhc---------ccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            111111         11111122335678899999999999999999999999988753

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.9e-39  Score=352.36  Aligned_cols=251  Identities=27%  Similarity=0.372  Sum_probs=199.9

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCC-CccccceEeeEEecCC
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEED  560 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~  560 (788)
                      +....|.+.++||+|+||+||+|..+  .++..||||.+.+..   ....+.+.+|.+++..+ +||||+++++++.+.+
T Consensus        20 ~~~~~y~~~~~lG~G~fg~V~~~~~~--~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~   97 (353)
T 3txo_A           20 LGIDNFEFIRVLGKGSFGKVMLARVK--ETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD   97 (353)
T ss_dssp             ---CCEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             CchhheEEEEEEeeCCCEEEEEEEEc--CCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC
Confidence            33445777899999999999999886  667799999997542   33456788999999988 7999999999999999


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ..++||||+++|+|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+||
T Consensus        98 ~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~-----~~g~ikL~DF  168 (353)
T 3txo_A           98 RLFFVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLD-----HEGHCKLADF  168 (353)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEEC-----TTSCEEECCC
T ss_pred             EEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEEC-----CCCCEEEccc
Confidence            999999999999999999655 5689999999999999999999999   999999999999998     7889999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      |+++...... ......+||+.|+|||++.+..++.++||||||+++|||++|+.||......+.            ...
T Consensus       169 G~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~------------~~~  235 (353)
T 3txo_A          169 GMCKEGICNG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL------------FEA  235 (353)
T ss_dssp             TTCBCSCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHH
T ss_pred             cceeecccCC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHH------------HHH
Confidence            9998643322 223346799999999999999999999999999999999999999976532211            111


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCH------HHHHH
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSM------KKVIH  769 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~------~evl~  769 (788)
                      +.....        ..  +......+.+++.+||+.||++||++      +|+++
T Consensus       236 i~~~~~--------~~--p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          236 ILNDEV--------VY--PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             HHHCCC--------CC--CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             HHcCCC--------CC--CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence            111111        00  11123567889999999999999998      77775

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=9.7e-39  Score=344.53  Aligned_cols=264  Identities=17%  Similarity=0.191  Sum_probs=206.0

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .|.+.+.||+|+||+||+|...  .++..||||.+....  ..+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A           10 NFRVGKKIGCGNFGELRLGKNL--YTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             TEEEEEECCC-CTTSEEEEEET--TTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             CeEEEEEeeccCCceEEEEEEC--CCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            4667799999999999999876  677899999986532  234678999999999 99999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+ +++|.+++......+++..++.++.||+.||.|||++   +|+||||||+|||++.........+||+|||++....
T Consensus        86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~  161 (330)
T 2izr_A           86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI  161 (330)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred             eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence            99 9999999987677899999999999999999999999   9999999999999983321122239999999998764


Q ss_pred             CCCCc------ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          648 KDQTR------TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       648 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      .....      ......||+.|+|||.+.+..++.++||||||+++|||++|+.||............    .. .....
T Consensus       162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~----~~-i~~~~  236 (330)
T 2izr_A          162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERY----QK-IGDTK  236 (330)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHH----HH-HHHHH
T ss_pred             cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHH----HH-HHhhh
Confidence            43321      123467999999999999999999999999999999999999999865322211100    00 00000


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      .......+.         ...+ ++.+++..||+.||.+||++++|++.|+++.
T Consensus       237 ~~~~~~~~~---------~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~  280 (330)
T 2izr_A          237 RATPIEVLC---------ENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF  280 (330)
T ss_dssp             HHSCHHHHT---------TTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             ccCCHHHHh---------ccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence            000000000         0012 7888999999999999999999999997553

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=1e-38  Score=341.31  Aligned_cols=254  Identities=22%  Similarity=0.231  Sum_probs=200.4

Q ss_pred             cCHHHHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCC-CccccceEeeEE
Q 047157          480 FTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRT-HHKNLVRLLGFC  556 (788)
Q Consensus       480 ~~~~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~  556 (788)
                      ....++....|.+.++||+|+||+||+|...  .++..||||++...  .......+..|+..+.++ +||||+++++++
T Consensus        49 ~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~  126 (311)
T 3p1a_A           49 SRPESFFQQSFQRLSRLGHGSYGEVFKVRSK--EDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAW  126 (311)
T ss_dssp             TSSSCHHHHHEEEEEEEEEETTEEEEEEEET--TTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CCccchhhhheeeeheeccCCCeEEEEEEEC--CCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEE
Confidence            3445666778888999999999999999886  56779999987543  233344556666666555 899999999999


Q ss_pred             ecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEE
Q 047157          557 SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAK  636 (788)
Q Consensus       557 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~k  636 (788)
                      .+++..++||||+ +++|.+++...+..+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+|
T Consensus       127 ~~~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~-----~~~~~k  197 (311)
T 3p1a_A          127 EEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLG-----PRGRCK  197 (311)
T ss_dssp             EETTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----GGGCEE
T ss_pred             EeCCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEC-----CCCCEE
Confidence            9999999999999 7799999988777899999999999999999999999   999999999999998     788999


Q ss_pred             EeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHH
Q 047157          637 ISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDW  716 (788)
Q Consensus       637 L~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~  716 (788)
                      |+|||++........  .....||+.|+|||++.+ .++.++||||||+++|||++|..|+......             
T Consensus       198 l~DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~-------------  261 (311)
T 3p1a_A          198 LGDFGLLVELGTAGA--GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGW-------------  261 (311)
T ss_dssp             ECCCTTCEECC--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHH-------------
T ss_pred             EccceeeeecccCCC--CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHH-------------
Confidence            999999987644322  234568999999999876 7999999999999999999998776543111             


Q ss_pred             HHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          717 VISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       717 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                        ..+........        ......+.+.+++.+||+.||++|||++|++++
T Consensus       262 --~~~~~~~~~~~--------~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  305 (311)
T 3p1a_A          262 --QQLRQGYLPPE--------FTAGLSSELRSVLVMMLEPDPKLRATAEALLAL  305 (311)
T ss_dssp             --HHHTTTCCCHH--------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             --HHHhccCCCcc--------cccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence              01111111000        011224678899999999999999999999863

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.8e-39  Score=352.30  Aligned_cols=263  Identities=27%  Similarity=0.404  Sum_probs=208.9

Q ss_pred             HHHhhcccccccccccceEEEEEEec---cCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecCC
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEED  560 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~  560 (788)
                      ....|.+.+.||+|+||.||+|.+..   ...+..||||.+.... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            34567788999999999999998742   3456789999987542 33456899999999999 8999999999999999


Q ss_pred             eEEEEEecCCCCCHhHhhhccCC----------------------CCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCC
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQ----------------------RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIK  618 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~----------------------~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlk  618 (788)
                      ..++||||+++++|.+++.....                      .+++..++.++.||+.||.|||++   +|+|||||
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik  199 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA  199 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence            99999999999999999976543                      368999999999999999999999   99999999


Q ss_pred             CCcEEeccCCCCCCCcEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCC
Q 047157          619 PQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRH  696 (788)
Q Consensus       619 p~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p  696 (788)
                      |+|||++     .++.+||+|||++......... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.|
T Consensus       200 p~NIll~-----~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p  274 (344)
T 1rjb_A          200 ARNVLVT-----HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP  274 (344)
T ss_dssp             GGGEEEE-----TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred             hhhEEEc-----CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCC
Confidence            9999998     7889999999999876543322 2233557889999999998899999999999999999998 9999


Q ss_pred             CCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          697 IELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      |........       ..    ...... .        ....+....+.+.+++.+||+.||++|||+.||+++|+.++.
T Consensus       275 ~~~~~~~~~-------~~----~~~~~~-~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          275 YPGIPVDAN-------FY----KLIQNG-F--------KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             STTCCCSHH-------HH----HHHHTT-C--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             cccCCcHHH-------HH----HHHhcC-C--------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            976432111       00    111111 0        001111224678889999999999999999999999988664

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=4.9e-39  Score=358.01  Aligned_cols=255  Identities=20%  Similarity=0.217  Sum_probs=205.7

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchH---HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .+.+.++||+|+||+||+|..+  .++..||+|++.+...   ...+.+.+|+.++..++||||+++++++.+.+..++|
T Consensus        75 ~y~~~~~LG~G~fG~V~~~~~~--~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV  152 (437)
T 4aw2_A           75 DFEILKVIGRGAFGEVAVVKLK--NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV  152 (437)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred             heEEEEEEEeCCCEEEEEEEEc--CCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence            4566789999999999999886  6678999999975322   1223488999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++|+|.+++.+....+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+++.
T Consensus       153 ~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~-----~~g~vkL~DFGla~~  224 (437)
T 4aw2_A          153 MDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMD-----MNGHIRLADFGSCLK  224 (437)
T ss_dssp             ECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----TTSCEEECCCTTCEE
T ss_pred             EecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEc-----CCCCEEEcchhhhhh
Confidence            999999999999987667899999999999999999999999   999999999999998     888999999999987


Q ss_pred             cCCCCCcccccccCCccccCccccc-----CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLR-----NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      .............||+.|+|||++.     ...++.++|||||||++|||++|+.||......+....        +...
T Consensus       225 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~--------i~~~  296 (437)
T 4aw2_A          225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK--------IMNH  296 (437)
T ss_dssp             CCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH--------HHTH
T ss_pred             cccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHh--------hhhc
Confidence            7655554445578999999999986     56789999999999999999999999976533221110        0000


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCC--CCCHHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNL--RPSMKKVIHM  770 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~  770 (788)
                      .....+       +...  ....+.+.+|+.+||+.+|++  ||+++|++++
T Consensus       297 ~~~~~~-------p~~~--~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          297 KERFQF-------PTQV--TDVSENAKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             HHHCCC-------CSSC--CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             cccccC-------Cccc--ccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence            000000       1100  012356778999999888888  9999999874

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=9.9e-39  Score=350.95  Aligned_cols=257  Identities=24%  Similarity=0.337  Sum_probs=201.2

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~  563 (788)
                      ..|.+.++||+|+||+||+++.+  .++..||+|++.+..   ....+.+.+|..++.++ +||||+++++++.+.+..+
T Consensus        52 ~~y~~~~~LG~G~fG~V~~~~~~--~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  129 (396)
T 4dc2_A           52 QDFDLLRVIGRGSYAKVLLVRLK--KTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF  129 (396)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             hHcEEEEEEeeCCCeEEEEEEEC--CCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence            34677899999999999999886  677899999997643   22334678899999876 8999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +||||+++|+|..++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++
T Consensus       130 lV~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~-----~~g~ikL~DFGla  200 (396)
T 4dc2_A          130 FVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLD-----SEGHIKLTDYGMC  200 (396)
T ss_dssp             EEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEEC-----TTSCEEECCCTTC
T ss_pred             EEEEcCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEC-----CCCCEEEeeccee
Confidence            999999999999999654 5689999999999999999999999   999999999999998     8889999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      +...... ......+||+.|+|||++.+..++.++||||||+++|||++|+.||......+.....   ...........
T Consensus       201 ~~~~~~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~---~~~~~~~~i~~  276 (396)
T 4dc2_A          201 KEGLRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN---TEDYLFQVILE  276 (396)
T ss_dssp             BCCCCTT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------C---CHHHHHHHHHH
T ss_pred             eecccCC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchh---hHHHHHHHHhc
Confidence            8633222 2234468999999999999999999999999999999999999999754322111100   11111111211


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCH------HHHHH
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSM------KKVIH  769 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~------~evl~  769 (788)
                      ...        ...  ......+.+++.+||+.||++||++      +||++
T Consensus       277 ~~~--------~~p--~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~  318 (396)
T 4dc2_A          277 KQI--------RIP--RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG  318 (396)
T ss_dssp             CCC--------CCC--TTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred             ccc--------CCC--CcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence            111        111  1124567889999999999999995      56665

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.5e-39  Score=339.97  Aligned_cols=258  Identities=26%  Similarity=0.388  Sum_probs=207.6

Q ss_pred             hhcccc-cccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSK-LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~-~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .+.+.+ .||+|+||.||+|.+.....+..||||.+.... ....+.+.+|++++++++||||+++++++ ..+..++||
T Consensus        10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~   88 (287)
T 1u59_A           10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM   88 (287)
T ss_dssp             GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred             HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence            344444 899999999999987655677889999997642 44567899999999999999999999999 556789999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++......+++..++.++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++...
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~-----~~~~~kl~Dfg~~~~~  160 (287)
T 1u59_A           89 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLV-----NRHYAKISDFGLSKAL  160 (287)
T ss_dssp             ECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEE-----ETTEEEECCCTTCEEC
T ss_pred             EeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEc-----CCCCEEECcccceeee
Confidence            99999999999987777899999999999999999999999   999999999999998     7789999999999877


Q ss_pred             CCCCCcc--cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          647 NKDQTRT--DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       647 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      .......  .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+.        .    .....
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--------~----~~i~~  228 (287)
T 1u59_A          161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV--------M----AFIEQ  228 (287)
T ss_dssp             TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH--------H----HHHHT
T ss_pred             ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH--------H----HHHhc
Confidence            5433221  223456889999999998899999999999999999998 9999975432111        0    11111


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ....         ..+......+.+++..||+.||++||++.|++++|+.+..
T Consensus       229 ~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  272 (287)
T 1u59_A          229 GKRM---------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  272 (287)
T ss_dssp             TCCC---------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCcC---------CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            1100         0111234678889999999999999999999999987653

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=2.9e-39  Score=338.24  Aligned_cols=258  Identities=30%  Similarity=0.436  Sum_probs=193.2

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchH----HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE----KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      ..|.+.+.||+|+||.||+|.+.    +..||||.+.....    ...+.+.+|+++++.++||||+++++++.+.+..+
T Consensus         7 ~~~~~~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (271)
T 3dtc_A            7 AELTLEEIIGIGGFGKVYRAFWI----GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLC   82 (271)
T ss_dssp             TSEEEEEEEEEETTEEEEEEEET----TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CE
T ss_pred             hheeeeeeeccCCCeEEEEEEEc----CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceE
Confidence            34667899999999999999863    56899999865432    23467899999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCC---CCCCcEEEeec
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL---DTNYMAKISDF  640 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~---~~~~~~kL~Df  640 (788)
                      +||||+++++|.+++.  ...+++..++.++.|++.||.|||++...+|+||||||+|||++....   ..++.+||+||
T Consensus        83 lv~e~~~~~~L~~~~~--~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df  160 (271)
T 3dtc_A           83 LVMEFARGGPLNRVLS--GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF  160 (271)
T ss_dssp             EEEECCTTEEHHHHHT--SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred             EEEEcCCCCCHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence            9999999999999984  357899999999999999999999982122999999999999984221   02678999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      |++........   ....|++.|+|||.+.+..++.++||||||+++|||++|+.||........           ... 
T Consensus       161 g~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-----------~~~-  225 (271)
T 3dtc_A          161 GLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV-----------AYG-  225 (271)
T ss_dssp             CC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH-----------HHH-
T ss_pred             Ccccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----------HHh-
Confidence            99986543322   234689999999999999999999999999999999999999975432111           000 


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      ......        .........+.+.+++.+||+.||++|||++|++++|+++
T Consensus       226 ~~~~~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          226 VAMNKL--------ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             HHTSCC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             hhcCCC--------CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            111110        1111122345788899999999999999999999999864

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1e-38  Score=339.15  Aligned_cols=248  Identities=25%  Similarity=0.319  Sum_probs=194.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchH--------------------------HHHHHHHHHHHHhc
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE--------------------------KTNEEFMTELKIIG  542 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~--------------------------~~~~~~~~E~~~l~  542 (788)
                      .|.+.+.||+|+||.||+|...  .++..||||.+.....                          ...+.+.+|+++++
T Consensus        14 ~y~~~~~lG~G~~g~Vy~a~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           14 QYTLKDEIGKGSYGVVKLAYNE--NDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             TEEEEEEEEC--CCEEEEEEET--TTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ceEEEeEEeecCCEEEEEEEEC--CCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            4677899999999999999876  6778999999865421                          12356889999999


Q ss_pred             CCCccccceEeeEEec--CCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCC
Q 047157          543 RTHHKNLVRLLGFCSE--EDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQ  620 (788)
Q Consensus       543 ~l~hpniv~~~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~  620 (788)
                      +++||||+++++++.+  .+..++||||+++++|.+++.  ...+++..+..++.||+.||.|||++   +|+||||||+
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~  166 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPS  166 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGG
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHH
Confidence            9999999999999986  568999999999999988763  35789999999999999999999999   9999999999


Q ss_pred             cEEeccCCCCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCC---CCccCcchhhHHHHHHHHhCCCCC
Q 047157          621 NVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP---VTTKVDVFSFGVMLLEIICGRRHI  697 (788)
Q Consensus       621 NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~s~k~DVwSlGvil~elltg~~p~  697 (788)
                      |||++     .++.+||+|||++........ ......||+.|+|||.+.+..   .+.++||||||+++|||++|+.||
T Consensus       167 Nil~~-----~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf  240 (298)
T 2zv2_A          167 NLLVG-----EDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF  240 (298)
T ss_dssp             GEEEC-----TTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSS
T ss_pred             HEEEC-----CCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCC
Confidence            99998     788999999999987654322 223457899999999997665   478899999999999999999999


Q ss_pred             CccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          698 ELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       698 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .......        .    ..........        ........+.+.+++.+||+.||++|||++|+++
T Consensus       241 ~~~~~~~--------~----~~~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          241 MDERIMC--------L----HSKIKSQALE--------FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             CCSSHHH--------H----HHHHHHCCCC--------CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCccHHH--------H----HHHHhcccCC--------CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            7542211        0    0111111110        0111122456788999999999999999999975

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5e-39  Score=347.13  Aligned_cols=260  Identities=27%  Similarity=0.484  Sum_probs=202.9

Q ss_pred             HHhhcccccccccccceEEEEEEeccC--cceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKD--TQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~--~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      ...+.+.+.||+|+||+||+|.....+  .+..||||.+.... ......+.+|++++++++||||+++++++.+.+..+
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  122 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM  122 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence            345566789999999999999886322  24569999987542 445568999999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +||||+++++|.+++......+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++
T Consensus       123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~-----~~~~~kl~Dfg~~  194 (333)
T 1mqb_A          123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVN-----SNLVCKVSDFGLS  194 (333)
T ss_dssp             EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC-----TTCCEEECCCCC-
T ss_pred             EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEEC-----CCCcEEECCCCcc
Confidence            99999999999999987777899999999999999999999999   999999999999998     7889999999999


Q ss_pred             cccCCCCCc--ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHH
Q 047157          644 KLLNKDQTR--TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       644 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      .........  ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+            ....
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~------------~~~~  262 (333)
T 1mqb_A          195 RVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE------------VMKA  262 (333)
T ss_dssp             ----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------------HHHH
T ss_pred             hhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH------------HHHH
Confidence            876543221  1222346788999999999999999999999999999999 999996542211            0111


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ...+.         ...........+.+++.+||+.||++||++.+++++|+++.
T Consensus       263 ~~~~~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~  308 (333)
T 1mqb_A          263 INDGF---------RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI  308 (333)
T ss_dssp             HHTTC---------CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HHCCC---------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            11110         00111123456888999999999999999999999998754

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=7.2e-39  Score=342.46  Aligned_cols=260  Identities=23%  Similarity=0.284  Sum_probs=199.4

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .|.+.+.||+|+||+||+|...   ++..||+|++....  ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus        22 ~y~~~~~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   98 (311)
T 3niz_A           22 KYQKLEKVGEGTYGVVYKAKDS---QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF   98 (311)
T ss_dssp             EEEEEEEEEECSSCEEEEEEET---TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred             hhHhhhhccCCCCeEEEEEEEC---CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence            4667799999999999999874   46799999986443  233567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||++ ++|.+++......+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++...
T Consensus        99 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~-----~~~~~kl~Dfg~a~~~  169 (311)
T 3niz_A           99 EFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLIN-----SDGALKLADFGLARAF  169 (311)
T ss_dssp             ECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC-----TTCCEEECCCTTCEET
T ss_pred             cCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEEC-----CCCCEEEccCcCceec
Confidence            9997 488888877777799999999999999999999999   999999999999998     7789999999999876


Q ss_pred             CCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ..... ......+|+.|+|||++.+ ..++.++||||||+++|||++|+.||......+....        .........
T Consensus       170 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~--------i~~~~~~~~  240 (311)
T 3niz_A          170 GIPVR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPK--------IFSILGTPN  240 (311)
T ss_dssp             TSCCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHH--------HHHHHCCCC
T ss_pred             CCCcc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHH--------HHHHHCCCC
Confidence            43322 2233568999999999876 5689999999999999999999999976543221110        111000000


Q ss_pred             c---c-------------ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          726 L---Q-------------VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       726 ~---~-------------~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .   .             ......+.........+++.+++.+||+.||++|||++|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          241 PREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             TTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            0   0             000000000000112357789999999999999999999987

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=6.4e-39  Score=344.63  Aligned_cols=252  Identities=25%  Similarity=0.321  Sum_probs=200.3

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .|.+.+.||+|+||+||+|...  .++..||||.+.... ....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus         8 ~y~i~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            8 DWDLVQTLGEGAYGEVQLAVNR--VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             CEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hceeeeEEecCCCEEEEEEEEC--CCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            4667899999999999999886  567799999986433 2334678899999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++..+.
T Consensus        86 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~-----~~~~~kl~Dfg~a~~~~  156 (323)
T 3tki_A           86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLD-----ERDNLKISDFGLATVFR  156 (323)
T ss_dssp             CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----TTCCEEECCCTTCEECE
T ss_pred             cCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEe-----CCCCEEEEEeeccceec
Confidence            99999999998543 5689999999999999999999999   999999999999998     77899999999998664


Q ss_pred             CCCC-cccccccCCccccCcccccCCCC-CccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          648 KDQT-RTDTNMRGTMGYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       648 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~-s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      .... .......||+.|+|||++.+..+ +.++||||||+++|||++|+.||........      ....+.     .. 
T Consensus       157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~------~~~~~~-----~~-  224 (323)
T 3tki_A          157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ------EYSDWK-----EK-  224 (323)
T ss_dssp             ETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH------HHHHHH-----TT-
T ss_pred             cCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH------HHHHHh-----cc-
Confidence            3222 22334679999999999987765 7899999999999999999999976432211      111110     00 


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                             .............+.+++.+||+.||++|||++|+++.
T Consensus       225 -------~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          225 -------KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             -------CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             -------cccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence                   00001111234567789999999999999999999875

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-38  Score=337.51  Aligned_cols=258  Identities=24%  Similarity=0.382  Sum_probs=203.9

Q ss_pred             hcccccccccccceEEEEEEecc-Ccceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE-EEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR-LLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~-~lV~  566 (788)
                      +...++||+|+||+||+|.+... .....+|+|.+.... ....+.+.+|++++++++||||+++++++.+.+.. ++||
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            34458899999999999987532 234479999987533 34567899999999999999999999999876655 9999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+.+++|.+++......+++..++.++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++...
T Consensus       103 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~-----~~~~~kl~Dfg~~~~~  174 (298)
T 3pls_A          103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLD-----ESFTVKVADFGLARDI  174 (298)
T ss_dssp             CCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC-----TTCCEEECCTTSSCTT
T ss_pred             ecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEc-----CCCcEEeCcCCCcccc
Confidence            99999999999988778889999999999999999999999   999999999999998     7889999999999865


Q ss_pred             CCCC---CcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          647 NKDQ---TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       647 ~~~~---~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ....   ........+++.|+|||.+.+..++.++||||||+++|||++|..|+.......       .....    ...
T Consensus       175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~-------~~~~~----~~~  243 (298)
T 3pls_A          175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF-------DLTHF----LAQ  243 (298)
T ss_dssp             TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG-------GHHHH----HHT
T ss_pred             cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH-------HHHHH----hhc
Confidence            4322   112233567889999999999999999999999999999999666653321111       01110    111


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ..         .........+.+.+++.+||+.||++|||++++++.|+++.
T Consensus       244 ~~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~  286 (298)
T 3pls_A          244 GR---------RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV  286 (298)
T ss_dssp             TC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CC---------CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            10         00111122456888999999999999999999999998765

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=5.1e-39  Score=343.74  Aligned_cols=263  Identities=27%  Similarity=0.441  Sum_probs=212.0

Q ss_pred             HHHhhcccccccccccceEEEEEEe---ccCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecCC
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEED  560 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~---~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~  560 (788)
                      ....|.+.+.||+|+||.||+|...   ....+..||||.+.... ....+.+.+|+++++++ +||||+++++++.+.+
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~  100 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence            3456778899999999999999863   23567799999987543 34457899999999999 9999999999999999


Q ss_pred             eEEEEEecCCCCCHhHhhhccCC-----------------CCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEE
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQ-----------------RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVL  623 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~-----------------~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIl  623 (788)
                      ..++||||+++++|.+++.....                 .+++..++.++.||+.||.|||++   +|+||||||+||+
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil  177 (313)
T 1t46_A          101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL  177 (313)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEE
Confidence            99999999999999999976543                 489999999999999999999999   9999999999999


Q ss_pred             eccCCCCCCCcEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccc
Q 047157          624 LDLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSR  701 (788)
Q Consensus       624 l~~~~~~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~  701 (788)
                      ++     .++.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus       178 ~~-----~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~  252 (313)
T 1t46_A          178 LT-----HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP  252 (313)
T ss_dssp             EE-----TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             Ec-----CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence            98     7889999999999877554332 2233457789999999999999999999999999999999 999997543


Q ss_pred             cccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          702 VEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ....       ....    .... ...        .........+.+++.+||+.||++|||++|++++|+++..
T Consensus       253 ~~~~-------~~~~----~~~~-~~~--------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  307 (313)
T 1t46_A          253 VDSK-------FYKM----IKEG-FRM--------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS  307 (313)
T ss_dssp             SSHH-------HHHH----HHHT-CCC--------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             chhH-------HHHH----hccC-CCC--------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            2111       1110    1110 010        0111234578889999999999999999999999987653

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-38  Score=340.09  Aligned_cols=244  Identities=27%  Similarity=0.320  Sum_probs=202.5

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||.||++...  .++..||+|.+.+..   ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         7 ~y~~~~~lG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            7 DFQILRTLGTGSFGRVHLIRSR--HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GEEEEEEEEECSSCEEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             HcEEEEEEeeCCCEEEEEEEEC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            4677899999999999999886  677899999997543   23456788999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++..
T Consensus        85 ~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~-----~~g~~kL~Dfg~a~~  155 (318)
T 1fot_A           85 MDYIEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLD-----KNGHIKITDFGFAKY  155 (318)
T ss_dssp             ECCCCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEEC-----TTSCEEECCCSSCEE
T ss_pred             EeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEc-----CCCCEEEeecCccee
Confidence            9999999999999654 5688999999999999999999999   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ....    .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+.            ........
T Consensus       156 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~------------~~~i~~~~  219 (318)
T 1fot_A          156 VPDV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT------------YEKILNAE  219 (318)
T ss_dssp             CSSC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH------------HHHHHHCC
T ss_pred             cCCc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH------------HHHHHhCC
Confidence            5432    2345799999999999999999999999999999999999999975432111            01111111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIH  769 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~  769 (788)
                      .        ..  +......+.+++.+||+.||++||     +++|+++
T Consensus       220 ~--------~~--p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          220 L--------RF--PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             C--------CC--CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             C--------CC--CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence            1        00  011235678899999999999999     8999985

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.3e-38  Score=338.27  Aligned_cols=264  Identities=18%  Similarity=0.227  Sum_probs=199.7

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ..|.+.+.||+|+||.||++...  .++..||+|.+....   ....+.+.+|+.++++++||||+++++++.+++..++
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l  111 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDT--VRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV  111 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEET--TTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEc--CCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence            35777899999999999999876  567899999987543   3345789999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++++|.+++... ..+++..++.++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++.
T Consensus       112 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~-----~~~~~kl~Dfg~~~  182 (309)
T 2h34_A          112 DMRLINGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVS-----ADDFAYLVDFGIAS  182 (309)
T ss_dssp             EEECCCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC-----TTSCEEECSCCC--
T ss_pred             EEEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEc-----CCCCEEEecCccCc
Confidence            99999999999999654 5689999999999999999999999   999999999999998     77899999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ..............+++.|+|||.+.+..++.++||||||+++|||++|+.||.......            ...... .
T Consensus       183 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------------~~~~~~-~  249 (309)
T 2h34_A          183 ATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV------------MGAHIN-Q  249 (309)
T ss_dssp             --------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH------------HHHHHH-S
T ss_pred             cccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH------------HHHHhc-c
Confidence            765543333344578999999999999999999999999999999999999997643210            000111 1


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-CHHHHHHHhhcCcCCCCCC
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-SMKKVIHMLEGTLEVGMPP  781 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~evl~~L~~~~~~~~pp  781 (788)
                      ......      .........+.+++.+||+.||++|| +++++++.|+..+....+.
T Consensus       250 ~~~~~~------~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~  301 (309)
T 2h34_A          250 AIPRPS------TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQD  301 (309)
T ss_dssp             CCCCGG------GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-----
T ss_pred             CCCCcc------ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhccc
Confidence            111000      00112234677899999999999999 9999999999887655443

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.7e-39  Score=353.97  Aligned_cols=255  Identities=21%  Similarity=0.197  Sum_probs=204.5

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ..+.+.++||+|+||.||++..+  .+++.||||++.+..   ....+.+.+|..++..++||||+++++++.+.+..++
T Consensus        61 ~~f~~~~~lG~G~fG~V~~~~~~--~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l  138 (412)
T 2vd5_A           61 DDFEILKVIGRGAFSEVAVVKMK--QTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYL  138 (412)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET--TTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred             hhEEEEEEEeeCCCeEEEEEEEC--CCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence            34566789999999999999886  677899999997532   2233458899999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++|+|.+++.+.+..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++++||+|||+++
T Consensus       139 VmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld-----~~g~vkL~DFGla~  210 (412)
T 2vd5_A          139 VMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLD-----RCGHIRLADFGSCL  210 (412)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----TTSCEEECCCTTCE
T ss_pred             EEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeec-----CCCCEEEeechhhe
Confidence            9999999999999987767899999999999999999999999   999999999999998     88899999999998


Q ss_pred             ccCCCCCcccccccCCccccCccccc-------CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHH
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLR-------NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV  717 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~  717 (788)
                      ..............||+.|+|||++.       ...++.++|||||||++|||++|+.||......+....        +
T Consensus       211 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~--------i  282 (412)
T 2vd5_A          211 KLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGK--------I  282 (412)
T ss_dssp             ECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH--------H
T ss_pred             eccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHH--------H
Confidence            77655443444568999999999987       45789999999999999999999999976532221100        0


Q ss_pred             HHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCC---CCHHHHHHH
Q 047157          718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLR---PSMKKVIHM  770 (788)
Q Consensus       718 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---Pt~~evl~~  770 (788)
                      .........       +.  .......++.+++.+||+ +|++|   |+++||+++
T Consensus       283 ~~~~~~~~~-------p~--~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          283 VHYKEHLSL-------PL--VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             HTHHHHCCC-------C------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred             HhcccCcCC-------Cc--cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence            000000000       00  011224577889999999 99998   699999864

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.6e-38  Score=332.31  Aligned_cols=248  Identities=25%  Similarity=0.353  Sum_probs=183.5

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchH---HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||.||+|...  .++..||+|.+.....   ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        12 ~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           12 DFKVGNLLGKGSFAGVYRAESI--HTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cceeeeeecCCCceEEEEEEEc--cCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            4667789999999999999876  5677999999865432   2346789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++......+++..++.++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++..
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~-----~~~~~kl~dfg~~~~  161 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLT-----RNMNIKIADFGLATQ  161 (278)
T ss_dssp             EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEEC-----TTCCEEECCCTTCEE
T ss_pred             EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEc-----CCCCEEEEeecceee
Confidence            999999999999987767889999999999999999999999   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ....... .....|++.|+|||.+.+..++.++||||||+++|||++|+.||......+....                 
T Consensus       162 ~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-----------------  223 (278)
T 3cok_A          162 LKMPHEK-HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNK-----------------  223 (278)
T ss_dssp             CC-----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------------------
T ss_pred             ccCCCCc-ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHH-----------------
Confidence            6433221 2235689999999999998999999999999999999999999976432211100                 


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                         .......  .+......+.+++.+||+.||++|||++++++
T Consensus       224 ---~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          224 ---VVLADYE--MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             ---CCSSCCC--CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ---HhhcccC--CccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence               0000000  11122456788999999999999999999986

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=7.3e-39  Score=344.33  Aligned_cols=261  Identities=25%  Similarity=0.383  Sum_probs=193.5

Q ss_pred             HHhhcccccccccccceEEEEEEeccCc-ceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE-
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDT-QIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR-  562 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~-~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~-  562 (788)
                      ...|.+.+.||+|+||+||+|.+...+. ...||||.+...  .....+.+.+|++++++++||||+++++++...... 
T Consensus        22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  101 (323)
T 3qup_A           22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG  101 (323)
T ss_dssp             ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred             hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence            3457788999999999999998763221 137999998754  244567899999999999999999999999887655 


Q ss_pred             -----EEEEecCCCCCHhHhhhccC-----CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCC
Q 047157          563 -----LLVYELMPNGTLSNFLFHEG-----QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTN  632 (788)
Q Consensus       563 -----~lV~e~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~  632 (788)
                           ++||||+++++|.+++....     ..+++..++.++.||+.||.|||++   +|+||||||+|||++     .+
T Consensus       102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~-----~~  173 (323)
T 3qup_A          102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLA-----ED  173 (323)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC-----TT
T ss_pred             CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEc-----CC
Confidence                 99999999999999995432     2589999999999999999999999   999999999999998     78


Q ss_pred             CcEEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccch
Q 047157          633 YMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVD  710 (788)
Q Consensus       633 ~~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~  710 (788)
                      +.+||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+..    
T Consensus       174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~----  249 (323)
T 3qup_A          174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIY----  249 (323)
T ss_dssp             SCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH----
T ss_pred             CCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHH----
Confidence            8999999999987644322 22223456788999999999999999999999999999999 89999764322210    


Q ss_pred             hhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          711 IVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       711 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                              .......         .........+.+.+++.+||+.||++|||+.++++.|++++.
T Consensus       250 --------~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~  298 (323)
T 3qup_A          250 --------NYLIGGN---------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG  298 (323)
T ss_dssp             --------HHHHTTC---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --------HHHhcCC---------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence                    0111111         001111234578899999999999999999999999998764

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=2.7e-38  Score=349.08  Aligned_cols=277  Identities=14%  Similarity=0.168  Sum_probs=205.6

Q ss_pred             Hhhccccccccc--ccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          488 ATKGFSKLVGTG--SSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       488 ~t~~~~~~lg~G--~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      ..|.+.++||+|  +||+||+|...  .++..||||++....  ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus        25 ~~y~~~~~lG~G~~~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  102 (389)
T 3gni_B           25 GCYELLTVIGKGFEDLMTVNLARYK--PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW  102 (389)
T ss_dssp             GGEEEEEEEEEETTTTEEEEEEEET--TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             CcEEEEecccCCcCCceEEEEEEEc--CCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence            357778999999  99999999986  677899999987543  445678889999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          564 LVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      +||||+++++|.+++... ...+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||.
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~-----~~~~~kl~dfg~  174 (389)
T 3gni_B          103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILIS-----VDGKVYLSGLRS  174 (389)
T ss_dssp             EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----TTCCEEECCGGG
T ss_pred             EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEc-----CCCCEEEccccc
Confidence            999999999999999654 35689999999999999999999999   999999999999998     788999999998


Q ss_pred             ccccCCCCC------cccccccCCccccCcccccC--CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh-h
Q 047157          643 SKLLNKDQT------RTDTNMRGTMGYVAPEWLRN--VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV-L  713 (788)
Q Consensus       643 a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~-~  713 (788)
                      +........      .......||+.|+|||++.+  ..++.++|||||||++|||++|+.||............... .
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  254 (389)
T 3gni_B          175 NLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTV  254 (389)
T ss_dssp             CEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----
T ss_pred             ceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC
Confidence            875432211      11223468899999999987  67999999999999999999999999764332211110000 0


Q ss_pred             HHHHHH------H--------hhcccccccccC---------CCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          714 SDWVIS------C--------MLSRNLQVLVSH---------DPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       714 ~~~~~~------~--------~~~~~~~~l~~~---------~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ......      .        .....+...+..         .+...........+.+|+.+||+.||++|||++|++++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          255 PCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  334 (389)
T ss_dssp             ---------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             CccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence            000000      0        000000000000         00000112234568899999999999999999999965


Q ss_pred             --hhcC
Q 047157          771 --LEGT  774 (788)
Q Consensus       771 --L~~~  774 (788)
                        ++++
T Consensus       335 p~f~~~  340 (389)
T 3gni_B          335 SFFKQI  340 (389)
T ss_dssp             GGGGGC
T ss_pred             HHHHHH
Confidence              4443

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=8.8e-39  Score=359.40  Aligned_cols=250  Identities=29%  Similarity=0.406  Sum_probs=202.8

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCC-eEEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED-KRLLVY  566 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~lV~  566 (788)
                      ..+.+.+.||+|+||.||+|.+.    +..||||.++...  ..+.|.+|++++++++||||+++++++.+.+ ..++||
T Consensus       193 ~~~~~~~~lG~G~fg~V~~~~~~----~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~  266 (450)
T 1k9a_A          193 KELKLLQTIGKGEFGDVMLGDYR----GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT  266 (450)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET----TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred             HHeEEEeeecCcCCeeEEEEEec----CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence            44667789999999999999873    4589999997643  4568999999999999999999999987665 799999


Q ss_pred             ecCCCCCHhHhhhccCC-CCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHEGQ-RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+++|+|.+++...+. .+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+++.
T Consensus       267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~-----~~~~~kl~DfG~a~~  338 (450)
T 1k9a_A          267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVS-----EDNVAKVSDFGLTKE  338 (450)
T ss_dssp             ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC-----TTSCEEECCCTTCEE
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEC-----CCCCEEEeeCCCccc
Confidence            99999999999987654 369999999999999999999999   999999999999998     788999999999985


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .....    ....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+..            .....+
T Consensus       339 ~~~~~----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~------------~~i~~~  402 (450)
T 1k9a_A          339 ASSTQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV------------PRVEKG  402 (450)
T ss_dssp             CC----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHH------------HHHHTT
T ss_pred             ccccc----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH------------HHHHcC
Confidence            43221    12356889999999999999999999999999999998 99999754322110            111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      .         ....+......+.+++.+||+.||++|||+.++++.|+.+..
T Consensus       403 ~---------~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~  445 (450)
T 1k9a_A          403 Y---------KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT  445 (450)
T ss_dssp             C---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             C---------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence            0         001111234678889999999999999999999999987653

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9.3e-39  Score=349.86  Aligned_cols=257  Identities=28%  Similarity=0.469  Sum_probs=196.0

Q ss_pred             hcccccccccccceEEEEEEecc-Ccceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEec-CCeEEEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSE-EDKRLLVY  566 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lV~  566 (788)
                      +.+.++||+|+||+||+|..... .....||+|.+.... ....+++.+|+.++++++||||+++++++.+ ++..++||
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            45668999999999999987633 234578999886532 3456789999999999999999999998754 56789999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++......+++..++.++.||++||.|||++   +|+||||||+|||++     .++.+||+|||+++..
T Consensus       171 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~-----~~~~~kL~DFG~a~~~  242 (373)
T 3c1x_A          171 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLD-----EKFTVKVADFGLARDM  242 (373)
T ss_dssp             ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC-----TTCCEEECCC------
T ss_pred             ECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEEC-----CCCCEEEeeccccccc
Confidence            99999999999987777889999999999999999999999   999999999999998     7889999999999866


Q ss_pred             CCCCCc---ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          647 NKDQTR---TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       647 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ......   ......+++.|+|||.+.+..++.++||||||+++|||++ |..||......+.        ...    ..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~--------~~~----~~  310 (373)
T 3c1x_A          243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI--------TVY----LL  310 (373)
T ss_dssp             ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH--------HHH----HH
T ss_pred             cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH--------HHH----HH
Confidence            433211   1223457788999999999999999999999999999999 6677754422111        000    11


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      .+..         ...+......+.+++.+||+.||++|||++|+++.|+.+.
T Consensus       311 ~~~~---------~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~  354 (373)
T 3c1x_A          311 QGRR---------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF  354 (373)
T ss_dssp             TTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCCC---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            1110         0011122456888999999999999999999999998765

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=3.4e-38  Score=341.76  Aligned_cols=256  Identities=24%  Similarity=0.342  Sum_probs=202.3

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~l  564 (788)
                      .|.+.+.||+|+||.||++..+  .++..||+|.+.+..   ....+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus        10 ~y~~~~~lG~G~fg~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   87 (345)
T 3a8x_A           10 DFDLLRVIGRGSYAKVLLVRLK--KTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF   87 (345)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             heEEEEEEEecCCeEEEEEEEC--CCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence            4677899999999999999886  677899999997542   34456788999999887 89999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+++
T Consensus        88 v~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~-----~~g~~kL~DFG~a~  158 (345)
T 3a8x_A           88 VIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLD-----SEGHIKLTDYGMCK  158 (345)
T ss_dssp             EECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEEC-----TTSCEEECCGGGCB
T ss_pred             EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEC-----CCCCEEEEeccccc
Confidence            99999999999999654 5689999999999999999999999   999999999999998     78899999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...........   .............
T Consensus       159 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~---~~~~~~~~~i~~~  234 (345)
T 3a8x_A          159 EGLRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ---NTEDYLFQVILEK  234 (345)
T ss_dssp             CSCCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC----------CHHHHHHHHHHC
T ss_pred             cccCCC-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccc---ccHHHHHHHHHcC
Confidence            643222 223346799999999999999999999999999999999999999975322111000   0011111111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCH------HHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSM------KKVIH  769 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~------~evl~  769 (788)
                      ..        ..  +......+.+++.+||+.||++||++      +|+++
T Consensus       235 ~~--------~~--p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~  275 (345)
T 3a8x_A          235 QI--------RI--PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG  275 (345)
T ss_dssp             CC--------CC--CTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred             CC--------CC--CCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence            11        11  11234567889999999999999995      67665

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=2.4e-38  Score=339.32  Aligned_cols=260  Identities=21%  Similarity=0.253  Sum_probs=204.1

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEe----cCCeEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCS----EEDKRL  563 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~----~~~~~~  563 (788)
                      ..|.+.+.||+|+||.||++...  .++..||||++........+.+.+|++++++++||||+++++++.    .....+
T Consensus        29 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  106 (317)
T 2buj_A           29 KHYLFIQKLGEGGFSYVDLVEGL--HDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW  106 (317)
T ss_dssp             EEEEEEEEEEC--CEEEEEEEET--TTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred             eEEEEEEEecCCCCeEEEEEEec--CCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence            34677899999999999999886  567799999987666667788999999999999999999999986    344789


Q ss_pred             EEEecCCCCCHhHhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          564 LVYELMPNGTLSNFLFH---EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      +||||+++++|.+++..   .+..+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+||
T Consensus       107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~-----~~~~~kl~df  178 (317)
T 2buj_A          107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLG-----DEGQPVLMDL  178 (317)
T ss_dssp             EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC-----TTSCEEECCC
T ss_pred             EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEc-----CCCCEEEEec
Confidence            99999999999999965   356789999999999999999999999   999999999999998     7889999999


Q ss_pred             CCccccCCCCCc--------ccccccCCccccCcccccCCC---CCccCcchhhHHHHHHHHhCCCCCCccccccccccc
Q 047157          641 GISKLLNKDQTR--------TDTNMRGTMGYVAPEWLRNVP---VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEV  709 (788)
Q Consensus       641 g~a~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~  709 (788)
                      |++.........        ......|++.|+|||.+....   ++.++||||||+++|||++|+.||.........   
T Consensus       179 g~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---  255 (317)
T 2buj_A          179 GSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS---  255 (317)
T ss_dssp             SSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC---
T ss_pred             CcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch---
Confidence            998765321111        011235789999999987543   789999999999999999999999643211100   


Q ss_pred             hhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          710 DIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       710 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                         ...    .... .        ............+.+++.+||+.||++|||++|+++.|+.+..
T Consensus       256 ---~~~----~~~~-~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          256 ---VAL----AVQN-Q--------LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             ---HHH----HHHC-C----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             ---hhH----Hhhc-c--------CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence               000    0000 0        0001111234578889999999999999999999999998754

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=4e-38  Score=344.50  Aligned_cols=272  Identities=15%  Similarity=0.171  Sum_probs=204.2

Q ss_pred             HHhhcccccccccccceEEEEEEeccC---cceeeeeeecccchHHH-----------HHHHHHHHHHhcCCCccccceE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKD---TQIEIAVKKLEKDIEKT-----------NEEFMTELKIIGRTHHKNLVRL  552 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~---~~~~vavK~l~~~~~~~-----------~~~~~~E~~~l~~l~hpniv~~  552 (788)
                      ...|.+.+.||+|+||.||+|.+....   .+..||||.+.......           ...+..|+..+..++||||+++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~  113 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY  113 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence            346778899999999999999886322   24689999986543211           1234556677888999999999


Q ss_pred             eeEEecC----CeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCC
Q 047157          553 LGFCSEE----DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKT  628 (788)
Q Consensus       553 ~~~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  628 (788)
                      ++++...    ...+|||||+ +++|.+++......+++..++.++.||+.||.|||++   +|+||||||+|||++.. 
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~-  188 (364)
T 3op5_A          114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYK-  188 (364)
T ss_dssp             EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESS-
T ss_pred             EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecC-
Confidence            9998764    4589999999 9999999988777899999999999999999999999   99999999999999732 


Q ss_pred             CCCCCcEEEeecCCccccCCCCCc------ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCcccc
Q 047157          629 LDTNYMAKISDFGISKLLNKDQTR------TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRV  702 (788)
Q Consensus       629 ~~~~~~~kL~Dfg~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~  702 (788)
                        .++.+||+|||+++.+......      ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.....
T Consensus       189 --~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~  266 (364)
T 3op5_A          189 --NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK  266 (364)
T ss_dssp             --CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred             --CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence              4678999999999876433211      11234599999999999999999999999999999999999999975322


Q ss_pred             ccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          703 EEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       703 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ...       ........ ....+..+++....   ....++++.+++..||+.||++||++++|++.|++++.
T Consensus       267 ~~~-------~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~  329 (364)
T 3op5_A          267 DPK-------YVRDSKIR-YRENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLK  329 (364)
T ss_dssp             CHH-------HHHHHHHH-HHHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred             CHH-------HHHHHHHH-hhhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence            111       00000000 01111111111000   01124567889999999999999999999999987653

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=2.2e-39  Score=348.75  Aligned_cols=257  Identities=24%  Similarity=0.382  Sum_probs=200.2

Q ss_pred             hhcccccccccccceEEEEEEeccCc--ceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDT--QIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||+||+|.+...+.  ...|++|.+.... ....+.+.+|+.++++++||||+++++++. ++..++|
T Consensus        14 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v   92 (325)
T 3kex_A           14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLV   92 (325)
T ss_dssp             TEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEE
T ss_pred             HceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEE
Confidence            46677899999999999999863222  2247778775432 223356778999999999999999999986 4668999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++......+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+++.
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~-----~~~~~kl~Dfg~a~~  164 (325)
T 3kex_A           93 TQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLK-----SPSQVQVADFGVADL  164 (325)
T ss_dssp             EECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEES-----SSSCEEECSCSGGGG
T ss_pred             EEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEEC-----CCCeEEECCCCcccc
Confidence            999999999999977666788999999999999999999999   999999999999998     788999999999997


Q ss_pred             cCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          646 LNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       646 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ....... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+.        ..    ....
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--------~~----~~~~  232 (325)
T 3kex_A          165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV--------PD----LLEK  232 (325)
T ss_dssp             SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH--------HH----HHHT
T ss_pred             cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH--------HH----HHHc
Confidence            7544322 2334567889999999998999999999999999999999 9999976432211        01    1111


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ....         .........+.+++.+||+.||++|||++|++++|+.+.
T Consensus       233 ~~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~  275 (325)
T 3kex_A          233 GERL---------AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA  275 (325)
T ss_dssp             TCBC---------CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred             CCCC---------CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            1000         000112234677899999999999999999999998764

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=2.8e-38  Score=346.18  Aligned_cols=250  Identities=26%  Similarity=0.343  Sum_probs=202.3

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ..|.+.+.||+|+||.||++...  .++..||+|.+....   ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~--~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l   92 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKN--DTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM   92 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEEC--CCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            45677899999999999999886  677799999986543   2345678899999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++|+|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++.
T Consensus        93 v~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~-----~~g~vkL~DFG~a~  163 (384)
T 4fr4_A           93 VVDLLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLD-----EHGHVHITDFNIAA  163 (384)
T ss_dssp             EECCCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----TTSCEEECCCTTCE
T ss_pred             EEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEC-----CCCCEEEeccceee
Confidence            99999999999999654 5689999999999999999999999   999999999999998     88899999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccC---CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRN---VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      ......  ......||+.|+|||++..   ..++.++||||||+++|||++|+.||.........        . .....
T Consensus       164 ~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~--------~-~~~~~  232 (384)
T 4fr4_A          164 MLPRET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK--------E-IVHTF  232 (384)
T ss_dssp             ECCTTC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHH--------H-HHHHH
T ss_pred             eccCCC--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHH--------H-HHHHH
Confidence            765332  2334679999999999864   45899999999999999999999999754322110        0 00111


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC-HHHHHH
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS-MKKVIH  769 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-~~evl~  769 (788)
                      .....        .  .+......+.+++.+||+.||++||+ +++|++
T Consensus       233 ~~~~~--------~--~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          233 ETTVV--------T--YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             HHCCC--------C--CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             hhccc--------C--CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            11100        0  01122457888999999999999998 777765

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=9e-39  Score=344.19  Aligned_cols=259  Identities=24%  Similarity=0.398  Sum_probs=199.9

Q ss_pred             HhhcccccccccccceEEEEEEeccCc--ceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDT--QIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ..|.+.++||+|+||+||+|.+...+.  ..+|++|.+... .....+.+.+|+.++++++||||+++++++.... .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~   93 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence            456778999999999999999863222  224577776433 2345678999999999999999999999998765 789


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |+|++++++|.+++......+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++.
T Consensus        94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~-----~~~~~kL~DfG~a~  165 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVK-----TPQHVKITDFGLAK  165 (327)
T ss_dssp             EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE-----ETTEEEECCTTC--
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEc-----CCCCEEEccCccee
Confidence            9999999999999988778899999999999999999999999   999999999999998     77899999999998


Q ss_pred             ccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          645 LLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       645 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+..        .    ...
T Consensus       166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~--------~----~~~  233 (327)
T 3lzb_A          166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS--------S----ILE  233 (327)
T ss_dssp             --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH--------H----HHH
T ss_pred             EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH--------H----HHH
Confidence            76443222 2223456788999999999999999999999999999999 99999765332210        1    011


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ..         ............+.+++.+||+.||++|||++|+++.|+++..
T Consensus       234 ~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          234 KG---------ERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             TT---------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             cC---------CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            11         0111111234567889999999999999999999999987754

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=5.9e-39  Score=354.64  Aligned_cols=252  Identities=23%  Similarity=0.245  Sum_probs=203.1

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchH---HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.++||+|+||+||+|..+  .++..||+|++.+...   ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        70 ~y~~~~~LG~G~fG~V~~~~~~--~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV  147 (410)
T 3v8s_A           70 DYEVVKVIGRGAFGEVQLVRHK--STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV  147 (410)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccEEEEEEEcCCCEEEEEEEEC--CCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence            4666789999999999999886  6678999999875321   2234578999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++|+|.+++..  ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+++.
T Consensus       148 ~E~~~gg~L~~~l~~--~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~-----~~g~ikL~DFG~a~~  217 (410)
T 3v8s_A          148 MEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLD-----KSGHLKLADFGTCMK  217 (410)
T ss_dssp             ECCCTTEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----TTSCEEECCCTTCEE
T ss_pred             EeCCCCCcHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeEC-----CCCCEEEeccceeEe
Confidence            999999999999965  3588999999999999999999999   999999999999998     888999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCC----CCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVP----VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      .............||+.|+|||++.+..    ++.++|||||||++|||++|+.||......+...            .+
T Consensus       218 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~------------~i  285 (410)
T 3v8s_A          218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS------------KI  285 (410)
T ss_dssp             CCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH------------HH
T ss_pred             eccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHH------------HH
Confidence            7655444444578999999999997665    7899999999999999999999997653222110            01


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCC--CCCHHHHHHH
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNL--RPSMKKVIHM  770 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~  770 (788)
                      ...... +.  .+.   .......+.+|+.+||+.+|.+  ||+++||+++
T Consensus       286 ~~~~~~-~~--~p~---~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          286 MNHKNS-LT--FPD---DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             HTHHHH-CC--CCT---TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             Hhcccc-cc--CCC---cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence            000000 00  000   0112356788999999999988  9999999975

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=4.3e-38  Score=330.52  Aligned_cols=254  Identities=22%  Similarity=0.297  Sum_probs=205.2

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ...|.+.+.||+|+||.||+|...  .++..+|+|++........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQK--GTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM   85 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeC--CCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence            345778899999999999999886  667789999997766566778999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++... ..+++..+..++.|++.||.|||++   +|+||||||+||++..+.  .++.+||+|||++...
T Consensus        86 e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~--~~~~~~l~Dfg~~~~~  159 (277)
T 3f3z_A           86 ELCTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDS--PDSPLKLIDFGLAARF  159 (277)
T ss_dssp             ECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSS--TTCCEEECCCTTCEEC
T ss_pred             eccCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCC--CCCcEEEEecccceec
Confidence            999999999998654 5689999999999999999999999   999999999999994222  7789999999999876


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      .....  .....+|+.|+|||.+.+. ++.++||||||+++|||++|+.||......+.            .........
T Consensus       160 ~~~~~--~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------------~~~~~~~~~  224 (277)
T 3f3z_A          160 KPGKM--MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV------------MLKIREGTF  224 (277)
T ss_dssp             CTTSC--BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHHHCCC
T ss_pred             cCccc--hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHH------------HHHHHhCCC
Confidence            54332  2335689999999998764 89999999999999999999999976432211            011111110


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ..      .........+.+.+++.+||+.||++|||+.|+++
T Consensus       225 ~~------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          225 TF------PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             CC------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CC------CchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            00      00000022467888999999999999999999985

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=2.9e-38  Score=340.65  Aligned_cols=250  Identities=22%  Similarity=0.352  Sum_probs=196.5

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCC------
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED------  560 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------  560 (788)
                      ..|.+.+.||+|+||.||+|.+.  .++..||||++.... ....+.+.+|++++++++||||+++++++.+..      
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~   83 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNK--VDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE   83 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEET--TTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEc--CCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence            45777899999999999999886  567799999986433 345678999999999999999999999986543      


Q ss_pred             ---------------------------------------------------eEEEEEecCCCCCHhHhhhccCC--CCCH
Q 047157          561 ---------------------------------------------------KRLLVYELMPNGTLSNFLFHEGQ--RPGW  587 (788)
Q Consensus       561 ---------------------------------------------------~~~lV~e~~~~gsL~~~l~~~~~--~~~~  587 (788)
                                                                         ..++||||+++++|.+++.....  ..++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~  163 (332)
T 3qd2_B           84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH  163 (332)
T ss_dssp             HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred             hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence                                                               37999999999999999976532  3466


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCC-----------ccccc
Q 047157          588 VQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT-----------RTDTN  656 (788)
Q Consensus       588 ~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~-----------~~~~~  656 (788)
                      ..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++........           .....
T Consensus       164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~-----~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~  235 (332)
T 3qd2_B          164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFT-----MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTG  235 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC-----TTCCEEECCCTTCEECSCC--------------CCCS
T ss_pred             HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEe-----CCCCEEEeecCcccccccchhhccccccccccccccc
Confidence            77899999999999999999   999999999999998     778999999999987754421           12233


Q ss_pred             ccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCC
Q 047157          657 MRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEV  736 (788)
Q Consensus       657 ~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  736 (788)
                      ..||+.|+|||.+.+..++.++||||||+++|||++|..|+....             . ...........         
T Consensus       236 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-------------~-~~~~~~~~~~~---------  292 (332)
T 3qd2_B          236 QVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-------------R-IITDVRNLKFP---------  292 (332)
T ss_dssp             CC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-------------H-HHHHHHTTCCC---------
T ss_pred             cCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-------------H-HHHHhhccCCC---------
Confidence            569999999999999999999999999999999999877643210             0 00001111100         


Q ss_pred             cccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          737 LSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       737 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .........+.+++.+||+.||++|||++|++++
T Consensus       293 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          293 LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIEN  326 (332)
T ss_dssp             HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred             cccccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence            1122344567889999999999999999999873

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=4.6e-39  Score=345.16  Aligned_cols=271  Identities=24%  Similarity=0.352  Sum_probs=207.4

Q ss_pred             hcccccccccccceEEEEEEe--ccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEec--CCeEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILR--LKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSE--EDKRLL  564 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~--~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~l  564 (788)
                      +.+.+.||+|+||+||++.+.  ...++..||||++.... ....+.+.+|++++++++||||+++++++.+  ....++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            367799999999999998764  22467799999997543 3456789999999999999999999999987  467899


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++++|.+++...  .+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++.
T Consensus       113 v~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~-----~~~~~kl~Dfg~a~  182 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLD-----NDRLVKIGDFGLAK  182 (318)
T ss_dssp             EECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----TTCCEEECCGGGCE
T ss_pred             EEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEc-----CCCCEEECCccccc
Confidence            99999999999999654  489999999999999999999999   999999999999998     78899999999998


Q ss_pred             ccCCCCCc--ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          645 LLNKDQTR--TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       645 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ........  ......++..|+|||.+.+..++.++||||||+++|||++|+.||........... ..........   
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~-~~~~~~~~~~---  258 (318)
T 3lxp_A          183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELI-GIAQGQMTVL---  258 (318)
T ss_dssp             ECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHH-CSCCHHHHHH---
T ss_pred             cccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhh-cccccchhHH---
Confidence            77544321  22335678889999999998999999999999999999999999875422110000 0000000000   


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                        .+...+...............+.+++.+||+.||++|||++|+++.|+++.+
T Consensus       259 --~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~  310 (318)
T 3lxp_A          259 --RLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE  310 (318)
T ss_dssp             --HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --HHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence              0011111111111122334678899999999999999999999999988764

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=7.3e-39  Score=346.49  Aligned_cols=249  Identities=25%  Similarity=0.324  Sum_probs=202.5

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~  562 (788)
                      ...|.+.+.||+|+||.||+|..+  .+++.||||.+.+..   ....+.+..|..++.++ +||||+++++++.+.+..
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFK--KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEET--TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEEC--CCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            345677899999999999999886  677899999997643   23456778899999876 899999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||+++|+|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+
T Consensus        94 ~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~-----~~g~vkL~DFG~  164 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLD-----KDGHIKIADFGM  164 (345)
T ss_dssp             EEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEEC-----TTSCEEECCCTT
T ss_pred             EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEEC-----CCCCEEEeEChh
Confidence            9999999999999999654 4688999999999999999999999   999999999999998     788999999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+.            ...+.
T Consensus       165 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~------------~~~i~  231 (345)
T 1xjd_A          165 CKENMLGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL------------FHSIR  231 (345)
T ss_dssp             CBCCCCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHH
T ss_pred             hhhcccCCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHH------------HHHHH
Confidence            986432222 23346799999999999999999999999999999999999999976432211            01111


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHH-HHHH
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMK-KVIH  769 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-evl~  769 (788)
                      ...        +..  +......+.+++.+||+.||++||++. ||++
T Consensus       232 ~~~--------~~~--p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~  269 (345)
T 1xjd_A          232 MDN--------PFY--PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  269 (345)
T ss_dssp             HCC--------CCC--CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             hCC--------CCC--CcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence            111        110  011235678899999999999999998 7653

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=6.8e-38  Score=331.75  Aligned_cols=263  Identities=20%  Similarity=0.245  Sum_probs=200.7

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .|.+.+.||+|+||+||+|...  .++..||+|++....  ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus         3 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   80 (292)
T 3o0g_A            3 KYEKLEKIGEGTYGTVFKAKNR--ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF   80 (292)
T ss_dssp             SEEEEEEEEECSSSEEEEEEET--TTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CceeeeEecCCCCeEEEEEEEC--CCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence            3667789999999999999886  667799999986432  344578889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++ +|.+++......+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++...
T Consensus        81 e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~-----~~~~~kl~Dfg~~~~~  151 (292)
T 3o0g_A           81 EFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLIN-----RNGELKLANFGLARAF  151 (292)
T ss_dssp             ECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----TTSCEEECCCTTCEEC
T ss_pred             ecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEc-----CCCCEEEeecccceec
Confidence            99975 67677766667899999999999999999999999   999999999999998     7889999999999876


Q ss_pred             CCCCCcccccccCCccccCcccccCCC-CCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc-
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR-  724 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  724 (788)
                      ..... ......+|+.|+|||.+.+.. ++.++||||||+++|||++|..|+........      .+ .......... 
T Consensus       152 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~------~~-~~i~~~~~~~~  223 (292)
T 3o0g_A          152 GIPVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD------QL-KRIFRLLGTPT  223 (292)
T ss_dssp             CSCCS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH------HH-HHHHHHHCCCC
T ss_pred             CCccc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH------HH-HHHHHHhCCCC
Confidence            43322 223457899999999997765 79999999999999999999988643321110      00 1111111000 


Q ss_pred             --cc---cccccCC---------CCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 --NL---QVLVSHD---------PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 --~~---~~l~~~~---------~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                        ..   .......         ............+.+++.+||+.||++|||++|++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  283 (292)
T 3o0g_A          224 EEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             TTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence              00   0000000         0000011234567889999999999999999999863

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=1.1e-38  Score=348.25  Aligned_cols=254  Identities=24%  Similarity=0.238  Sum_probs=192.0

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .|.+.+.||+|+||+||++...  .++..||||.+.... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus        21 ~y~~~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           21 RYDFVKDIGSGNFGVARLMRDK--LTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TEEEEEEESSSTTSSEEEEEET--TTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cEEEEEEeccCCCEEEEEEEEC--CCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            4777899999999999999886  677799999997543 2345688999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++..   ....+||+|||+++....
T Consensus        98 ~~~~~L~~~l~~~-~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~---~~~~~kl~Dfg~a~~~~~  170 (361)
T 3uc3_A           98 ASGGELYERICNA-GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGS---PAPRLKICDFGYSKSSVL  170 (361)
T ss_dssp             CCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSS---SSCCEEECCCCCC-----
T ss_pred             CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCC---CCceEEEeecCccccccc
Confidence            9999999999654 4689999999999999999999999   99999999999999721   233599999999975432


Q ss_pred             CCCcccccccCCccccCcccccCCCCCcc-CcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTK-VDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k-~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      ..  ......||+.|+|||++.+..++.+ +||||||+++|+|++|+.||..........       ... ......   
T Consensus       171 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~-------~~~-~~~~~~---  237 (361)
T 3uc3_A          171 HS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYR-------KTI-QRILSV---  237 (361)
T ss_dssp             ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHH-------HHH-HHHHTT---
T ss_pred             cC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHH-------HHH-HHHhcC---
Confidence            22  2233568999999999988887665 899999999999999999997643221110       000 111111   


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                           .............+.+++.+||+.||++|||++|++++
T Consensus       238 -----~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          238 -----KYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             -----CCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             -----CCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence                 11111111224567889999999999999999999974

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=1.9e-38  Score=344.43  Aligned_cols=250  Identities=27%  Similarity=0.327  Sum_probs=203.7

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~  562 (788)
                      ...|.+.+.||+|+||.||+|...  .++..||+|.+.+..   ....+.+..|..++..+ +||||+++++++.+.+..
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~--~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~   96 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERK--GTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL   96 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEET--TEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEEC--CCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence            345777899999999999999886  677899999997643   23456788999999988 899999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||+++|+|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+
T Consensus        97 ~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~-----~~g~vkL~DFG~  167 (353)
T 2i0e_A           97 YFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLD-----SEGHIKIADFGM  167 (353)
T ss_dssp             EEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEEC-----TTSCEEECCCTT
T ss_pred             EEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEc-----CCCcEEEEeCCc
Confidence            9999999999999999654 4689999999999999999999999   999999999999998     788999999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+.            ...+.
T Consensus       168 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~------------~~~i~  234 (353)
T 2i0e_A          168 CKENIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL------------FQSIM  234 (353)
T ss_dssp             CBCCCCTTC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHH
T ss_pred             ccccccCCc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHH------------HHHHH
Confidence            986432222 23346799999999999999999999999999999999999999976432111            11111


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHHH
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS-----MKKVIHM  770 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~  770 (788)
                      ....        ..  +......+.+++.+||+.||++||+     ++||+++
T Consensus       235 ~~~~--------~~--p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h  277 (353)
T 2i0e_A          235 EHNV--------AY--PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  277 (353)
T ss_dssp             HCCC--------CC--CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred             hCCC--------CC--CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            1111        11  1123456788999999999999995     5777754

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=5.1e-39  Score=343.65  Aligned_cols=259  Identities=20%  Similarity=0.266  Sum_probs=195.6

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCe---
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDK---  561 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~---  561 (788)
                      ..|.+.+.||+|+||.||++.+.  .++..||||.+....   ....+.+.+|++++++++||||+++++++.....   
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~   89 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDL--RDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   89 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred             CcEEEEEEEccCCCEEEEEEEEC--CCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence            35677899999999999999886  677899999986542   3445688999999999999999999999876543   


Q ss_pred             -EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          562 -RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       562 -~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                       .++||||+++++|.+++... ..+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+||
T Consensus        90 ~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~-----~~~~~kl~Df  160 (311)
T 3ork_A           90 LPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMIS-----ATNAVKVMDF  160 (311)
T ss_dssp             EEEEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-----TTSCEEECCC
T ss_pred             ccEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEc-----CCCCEEEeec
Confidence             49999999999999999655 4689999999999999999999999   999999999999998     7889999999


Q ss_pred             CCccccCCCCCc--ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHH
Q 047157          641 GISKLLNKDQTR--TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVI  718 (788)
Q Consensus       641 g~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  718 (788)
                      |++.........  ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+.           ..
T Consensus       161 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-----------~~  229 (311)
T 3ork_A          161 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-----------AY  229 (311)
T ss_dssp             SCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-----------HH
T ss_pred             cCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-----------HH
Confidence            999876543221  22335689999999999999999999999999999999999999976432211           11


Q ss_pred             HHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHH-HHhhcCc
Q 047157          719 SCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI-HMLEGTL  775 (788)
Q Consensus       719 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl-~~L~~~~  775 (788)
                      ..........       ..........+.+++.+||+.||++||++.+++ +.|....
T Consensus       230 ~~~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  280 (311)
T 3ork_A          230 QHVREDPIPP-------SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  280 (311)
T ss_dssp             HHHHCCCCCH-------HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HHhcCCCCCc-------ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence            1111110000       000111345678899999999999999665544 5555443

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=2.4e-38  Score=343.47  Aligned_cols=247  Identities=23%  Similarity=0.310  Sum_probs=201.5

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccc---hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD---IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ..|...+.||+|+||+||+|...  .++..||||++...   .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  131 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDV--RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL  131 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEc--cCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEE
Confidence            44677789999999999999876  67789999998643   24445689999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||++ |+|.+++......+++..+..++.||++||.|||++   +|+||||||+|||++     .++.+||+|||++.
T Consensus       132 v~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~-----~~~~~kL~DfG~a~  202 (348)
T 1u5q_A          132 VMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLS-----EPGLVKLGDFGSAS  202 (348)
T ss_dssp             EEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEE-----TTTEEEECCCTTCB
T ss_pred             EEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEC-----CCCCEEEeeccCce
Confidence            999997 688888876667899999999999999999999999   999999999999998     78899999999998


Q ss_pred             ccCCCCCcccccccCCccccCccccc---CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      .....     ....||+.|+|||++.   ...++.++||||||+++|||++|+.||........           ... .
T Consensus       203 ~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~-----------~~~-~  265 (348)
T 1u5q_A          203 IMAPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-----------LYH-I  265 (348)
T ss_dssp             SSSSB-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-----------HHH-H
T ss_pred             ecCCC-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-----------HHH-H
Confidence            65432     2356899999999984   56789999999999999999999999965422110           001 1


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ........        ......+.+.+++.+||+.||++|||+++++++
T Consensus       266 ~~~~~~~~--------~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          266 AQNESPAL--------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             HHSCCCCC--------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             HhcCCCCC--------CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            11111111        111224567889999999999999999999864

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=2.7e-38  Score=343.10  Aligned_cols=245  Identities=21%  Similarity=0.221  Sum_probs=203.4

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||.||++...  .++..||+|.+.+..   ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus        42 ~y~~~~~lG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  119 (350)
T 1rdq_E           42 QFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV  119 (350)
T ss_dssp             GEEEEEEEEECSSCEEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HCEEEEEeecCcCcEEEEEEEC--CCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence            4667799999999999999886  667799999986543   23456788999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++..
T Consensus       120 ~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~-----~~g~~kL~DFg~a~~  190 (350)
T 1rdq_E          120 MEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLID-----QQGYIQVTDFGFAKR  190 (350)
T ss_dssp             EECCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----TTSCEEECCCTTCEE
T ss_pred             EcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEEC-----CCCCEEEccccccee
Confidence            9999999999999765 4689999999999999999999999   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ....    .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+.            ...+..+.
T Consensus       191 ~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~------------~~~i~~~~  254 (350)
T 1rdq_E          191 VKGR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI------------YEKIVSGK  254 (350)
T ss_dssp             CSSC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHHHCC
T ss_pred             ccCC----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHH------------HHHHHcCC
Confidence            6432    2345789999999999999999999999999999999999999975432111            11111111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS-----MKKVIHM  770 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~  770 (788)
                      ..        .  +......+.+++.+||+.||++||+     ++||+++
T Consensus       255 ~~--------~--p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h  294 (350)
T 1rdq_E          255 VR--------F--PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             CC--------C--CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             CC--------C--CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence            10        0  1122456788999999999999998     8888763

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=3.2e-38  Score=333.80  Aligned_cols=263  Identities=24%  Similarity=0.417  Sum_probs=196.6

Q ss_pred             HHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCe
Q 047157          484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDK  561 (788)
Q Consensus       484 ~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  561 (788)
                      |+....|.+.+.||+|+||+||+|...    + .||+|.+...  .....+.+.+|++++++++||||+++++++ ....
T Consensus        20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~----~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~   93 (289)
T 3og7_A           20 EIPDGQITVGQRIGSGSFGTVYKGKWH----G-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQ   93 (289)
T ss_dssp             BCCTTSCEEEEEEEECSSEEEEEEESS----S-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSS
T ss_pred             ccCccceeeeeEecCCCCeEEEEEEEc----C-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCc
Confidence            445566788899999999999999753    2 4888887533  345567899999999999999999999965 5567


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      .++||||+++++|.+++......+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~-----~~~~~kl~Dfg  165 (289)
T 3og7_A           94 LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLH-----EDNTVKIGDFG  165 (289)
T ss_dssp             CEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE-----TTTEEEECCCC
T ss_pred             cEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEEC-----CCCCEEEccce
Confidence            8999999999999999987778899999999999999999999999   999999999999998     77899999999


Q ss_pred             CccccCCCC-CcccccccCCccccCccccc---CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHH
Q 047157          642 ISKLLNKDQ-TRTDTNMRGTMGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV  717 (788)
Q Consensus       642 ~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~  717 (788)
                      ++....... ........||+.|+|||.+.   +..++.++||||||+++|||++|+.||......+.           .
T Consensus       166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-----------~  234 (289)
T 3og7_A          166 LATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-----------I  234 (289)
T ss_dssp             ------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH-----------H
T ss_pred             eccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH-----------H
Confidence            998654322 22233456899999999986   66788999999999999999999999975422111           1


Q ss_pred             HHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       718 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ..............     .......+.+.+++.+||+.||++|||++|++++|+++.+
T Consensus       235 ~~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          235 IEMVGRGSLSPDLS-----KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HHHHHHTSCCCCTT-----SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHhcccccCcchh-----hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            11111111111100     0011234678899999999999999999999999998753

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=4.6e-39  Score=338.30  Aligned_cols=256  Identities=25%  Similarity=0.422  Sum_probs=206.6

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ...|.+.+.||+|+||.||+|...   .+..||+|.+.... ...+.+.+|++++++++||||+++++++.+ +..++||
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~   86 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYN---GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT   86 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET---TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             HHhhhheeeecCCCCeEEEEEEEc---CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEE
Confidence            346778899999999999999874   55689999986543 235688999999999999999999999864 5689999


Q ss_pred             ecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+++++|.+++.... ..+++..++.++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++..
T Consensus        87 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~-----~~~~~kl~Dfg~~~~  158 (279)
T 1qpc_A           87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVS-----DTLSCKIADFGLARL  158 (279)
T ss_dssp             ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----TTSCEEECCCTTCEE
T ss_pred             ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEc-----CCCCEEECCCccccc
Confidence            9999999999996542 3689999999999999999999999   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .............++..|+|||.+.+..++.++||||||+++|||++ |+.||......+.            .......
T Consensus       159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~------------~~~~~~~  226 (279)
T 1qpc_A          159 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV------------IQNLERG  226 (279)
T ss_dssp             CSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH------------HHHHHTT
T ss_pred             ccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHH------------HHHHhcc
Confidence            75544333334557789999999998899999999999999999999 8999975432111            0111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      .         .........+.+.+++.+||+.||++|||++++++.|+++..
T Consensus       227 ~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  269 (279)
T 1qpc_A          227 Y---------RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (279)
T ss_dssp             C---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             c---------CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence            0         000111234678889999999999999999999999987653

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.4e-38  Score=368.40  Aligned_cols=251  Identities=26%  Similarity=0.414  Sum_probs=202.7

Q ss_pred             cccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCCC
Q 047157          495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGT  573 (788)
Q Consensus       495 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~gs  573 (788)
                      .||+|+||.||+|.++....+..||||.++... ....+++.+|++++++++||||+++++++.. +..++||||+++|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            799999999999998766677789999997643 3456789999999999999999999999976 56899999999999


Q ss_pred             HhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCcc
Q 047157          574 LSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT  653 (788)
Q Consensus       574 L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~  653 (788)
                      |.+++......+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+++.........
T Consensus       422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~-----~~~~vkL~DFGla~~~~~~~~~~  493 (613)
T 2ozo_A          422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLV-----NRHYAKISDFGLSKALGADDSYY  493 (613)
T ss_dssp             HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEE-----ETTEEEECCCSTTTTCC------
T ss_pred             HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEc-----CCCcEEEeeccCcccccCCCcee
Confidence            9999987777899999999999999999999999   999999999999998     77899999999998765433221


Q ss_pred             --cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcccccccc
Q 047157          654 --DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLV  730 (788)
Q Consensus       654 --~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  730 (788)
                        .....+++.|+|||++.+..++.++||||||+++|||++ |+.||......+.            ...+..+.     
T Consensus       494 ~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~------------~~~i~~~~-----  556 (613)
T 2ozo_A          494 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV------------MAFIEQGK-----  556 (613)
T ss_dssp             --------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHH------------HHHHHTTC-----
T ss_pred             eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH------------HHHHHcCC-----
Confidence              122345688999999998999999999999999999998 9999976432211            11111111     


Q ss_pred             cCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          731 SHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       731 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                          ....+......+.+++..||+.||++||++++|++.|+.+.
T Consensus       557 ----~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~  597 (613)
T 2ozo_A          557 ----RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY  597 (613)
T ss_dssp             ----CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             ----CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence                01111223467889999999999999999999999998753

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=1.6e-38  Score=337.59  Aligned_cols=259  Identities=28%  Similarity=0.454  Sum_probs=201.9

Q ss_pred             hhcccccccccccceEEEEEEecc-Ccceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEe-cCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCS-EEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lV  565 (788)
                      .|.+.++||+|+||+||+|.+... .....+|+|.+.... ....+.+.+|+.++++++||||+++++++. .++..++|
T Consensus        26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  105 (298)
T 3f66_A           26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  105 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEE
Confidence            356678999999999999987532 334568999886533 445678999999999999999999999864 55688999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++......+++..++.++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++..
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~-----~~~~~kl~Dfg~a~~  177 (298)
T 3f66_A          106 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLD-----EKFTVKVADFGLARD  177 (298)
T ss_dssp             EECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC-----TTCCEEECSCGGGCC
T ss_pred             EeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEC-----CCCCEEECccccccc
Confidence            999999999999987777889999999999999999999999   999999999999998     788999999999987


Q ss_pred             cCCCCC---cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhC-CCCCCccccccccccchhhhHHHHHHHh
Q 047157          646 LNKDQT---RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICG-RRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       646 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      ......   .......+|+.|+|||.+.+..++.++||||||+++|||++| ..||......+.        ..    ..
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~--------~~----~~  245 (298)
T 3f66_A          178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI--------TV----YL  245 (298)
T ss_dssp             CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH--------HH----HH
T ss_pred             ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH--------HH----HH
Confidence            644322   122335577889999999999999999999999999999995 455543322111        00    01


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      .....         ..........+.+++.+||+.||++|||++|+++.|+++..
T Consensus       246 ~~~~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  291 (298)
T 3f66_A          246 LQGRR---------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  291 (298)
T ss_dssp             HTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hcCCC---------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            11100         00011123568889999999999999999999999988754

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.5e-38  Score=339.31  Aligned_cols=253  Identities=27%  Similarity=0.431  Sum_probs=194.2

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      ..+.+.+.||+|+||+||+|...    +..||||.+...  ...+.+.+|++++++++||||+++++++.+  ..++|||
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e   79 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR----AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVME   79 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET----TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEE
T ss_pred             hHeeeeeEeecCCCceEEEEEEC----CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEE
Confidence            45667899999999999999863    468999998753  345789999999999999999999998874  4799999


Q ss_pred             cCCCCCHhHhhhccCC--CCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCc-EEEeecCCcc
Q 047157          568 LMPNGTLSNFLFHEGQ--RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM-AKISDFGISK  644 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~-~kL~Dfg~a~  644 (788)
                      |+++++|.+++.....  .+++..++.++.||++||.|||+.+..+|+||||||+|||++     .++. +||+|||++.
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~-----~~~~~~kl~Dfg~~~  154 (307)
T 2eva_A           80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV-----AGGTVLKICDFGTAC  154 (307)
T ss_dssp             CCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEE-----TTTTEEEECCCCC--
T ss_pred             cCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEe-----CCCCEEEEccccccc
Confidence            9999999999976543  468899999999999999999993323999999999999998     5554 8999999997


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ......    ....||+.|+|||.+.+..++.++||||||+++|||++|+.||........         ..... ....
T Consensus       155 ~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---------~~~~~-~~~~  220 (307)
T 2eva_A          155 DIQTHM----TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF---------RIMWA-VHNG  220 (307)
T ss_dssp             --------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH---------HHHHH-HHTT
T ss_pred             cccccc----ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH---------HHHHH-HhcC
Confidence            654322    234689999999999999999999999999999999999999974321110         00000 1111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      .....         .......+.+++.+||+.||++|||++|++++|+.+..
T Consensus       221 ~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  263 (307)
T 2eva_A          221 TRPPL---------IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR  263 (307)
T ss_dssp             CCCCC---------BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred             CCCCc---------ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence            11111         11223567889999999999999999999999987653

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=1.2e-38  Score=344.27  Aligned_cols=264  Identities=28%  Similarity=0.419  Sum_probs=210.5

Q ss_pred             HHHHHhhcccccccccccceEEEEEEec-----cCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEE
Q 047157          484 ELQEATKGFSKLVGTGSSGKVYRGILRL-----KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFC  556 (788)
Q Consensus       484 ~l~~~t~~~~~~lg~G~~g~Vy~~~~~~-----~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~  556 (788)
                      ++....|.+.+.||+|+||.||+|....     ...+..||||.+.... ....+.+.+|+++++++ +||||+++++++
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  110 (334)
T 2pvf_A           31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC  110 (334)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence            3445677888999999999999998752     1345689999997543 44567899999999999 899999999999


Q ss_pred             ecCCeEEEEEecCCCCCHhHhhhccC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCc
Q 047157          557 SEEDKRLLVYELMPNGTLSNFLFHEG---------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQN  621 (788)
Q Consensus       557 ~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~N  621 (788)
                      .+.+..++||||+++++|.+++....               ..+++..++.++.||+.||.|||++   +|+||||||+|
T Consensus       111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N  187 (334)
T 2pvf_A          111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN  187 (334)
T ss_dssp             CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccce
Confidence            99999999999999999999997643               2478999999999999999999999   99999999999


Q ss_pred             EEeccCCCCCCCcEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCc
Q 047157          622 VLLDLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIEL  699 (788)
Q Consensus       622 Ill~~~~~~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~  699 (788)
                      ||++     .++.+||+|||++......... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||..
T Consensus       188 Ill~-----~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~  262 (334)
T 2pvf_A          188 VLVT-----ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG  262 (334)
T ss_dssp             EEEC-----TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             EEEc-----CCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCc
Confidence            9998     7889999999999876543322 2233456788999999988899999999999999999999 9999975


Q ss_pred             cccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          700 SRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ....+.            ...........         ........+.+++.+||+.||++|||++|+++.|+++..
T Consensus       263 ~~~~~~------------~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~  318 (334)
T 2pvf_A          263 IPVEEL------------FKLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  318 (334)
T ss_dssp             CCHHHH------------HHHHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCHHHH------------HHHHhcCCCCC---------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            432111            01111111000         111234568889999999999999999999999998764

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=2.4e-38  Score=340.49  Aligned_cols=261  Identities=21%  Similarity=0.244  Sum_probs=184.1

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC-ccccceEeeEEecCCeEEEEEecCCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      +.||+|+||+||++.+.  .++..||||.+...   ....+.+|+.+++++. ||||+++++++.+....++||||++++
T Consensus        17 ~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~   91 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHK--KSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG   91 (325)
T ss_dssp             CCSEEETTEEEEEEEET--TTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             CccccCCCeEEEEEEEC--CCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence            78999999999999886  66779999999754   3456778999999996 999999999999999999999999999


Q ss_pred             CHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCc
Q 047157          573 TLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR  652 (788)
Q Consensus       573 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~  652 (788)
                      +|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++.++  ....+||+|||++........ 
T Consensus        92 ~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~--~~~~~kl~Dfg~a~~~~~~~~-  164 (325)
T 3kn6_A           92 ELFERIKKK-KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDEN--DNLEIKIIDFGFARLKPPDNQ-  164 (325)
T ss_dssp             BHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC------CEEEECCCTTCEECCC----
T ss_pred             cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCC--CcccEEEeccccceecCCCCC-
Confidence            999999664 5789999999999999999999999   999999999999997332  344899999999986544322 


Q ss_pred             ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccC
Q 047157          653 TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSH  732 (788)
Q Consensus       653 ~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  732 (788)
                      ......+|+.|+|||++.+..++.++||||||+++|||++|+.||............     .........+...     
T Consensus       165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~-----~~~~~~i~~~~~~-----  234 (325)
T 3kn6_A          165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSA-----VEIMKKIKKGDFS-----  234 (325)
T ss_dssp             -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCH-----HHHHHHHTTTCCC-----
T ss_pred             cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccH-----HHHHHHHHcCCCC-----
Confidence            223456899999999999999999999999999999999999999765332111110     0111111111110     


Q ss_pred             CCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--hhcCcCC
Q 047157          733 DPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM--LEGTLEV  777 (788)
Q Consensus       733 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~~~~~  777 (788)
                       ..........+.+.+++.+||+.||++|||++|++++  +++....
T Consensus       235 -~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~~  280 (325)
T 3kn6_A          235 -FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQL  280 (325)
T ss_dssp             -CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCCC
T ss_pred             -CCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCccC
Confidence             0000011235678899999999999999999999854  4443333

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=9.2e-39  Score=337.76  Aligned_cols=261  Identities=23%  Similarity=0.291  Sum_probs=197.5

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .|.+.+.||+|+||+||+|..   ..+..||+|++....  ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus         3 ~y~~~~~lg~G~~g~V~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (288)
T 1ob3_A            3 KYHGLEKIGEGTYGVVYKAQN---NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF   79 (288)
T ss_dssp             SEEEEEEEEEETTEEEEEEEE---TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             cchhhhhcccCCCEEEEEEEc---CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence            366778999999999999987   356689999886432  223467889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++ +|.+++......+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++...
T Consensus        80 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~-----~~~~~kl~Dfg~~~~~  150 (288)
T 1ob3_A           80 EHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLIN-----REGELKIADFGLARAF  150 (288)
T ss_dssp             ECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC-----TTSCEEECCTTHHHHH
T ss_pred             EecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEc-----CCCCEEEeECcccccc
Confidence            99975 99999977767889999999999999999999999   999999999999998     7889999999999865


Q ss_pred             CCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc-
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR-  724 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  724 (788)
                      ..... ......+|+.|+|||++.+ ..++.++||||||+++|||++|+.||......+...       . ........ 
T Consensus       151 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~-------~-~~~~~~~~~  221 (288)
T 1ob3_A          151 GIPVR-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM-------R-IFRILGTPN  221 (288)
T ss_dssp             CC----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-------H-HHHHHCCCC
T ss_pred             Ccccc-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-------H-HHHHHCCCC
Confidence            43221 2233468999999999875 458999999999999999999999997643221110       0 00100000 


Q ss_pred             --c---ccccccCCCCC---------cccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 --N---LQVLVSHDPEV---------LSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 --~---~~~l~~~~~~~---------~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                        .   ...+....+..         .......+.+.+++.+||+.||++|||++|++++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  281 (288)
T 1ob3_A          222 SKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (288)
T ss_dssp             TTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence              0   00000000000         0001234567899999999999999999999863

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1e-37  Score=337.33  Aligned_cols=274  Identities=23%  Similarity=0.293  Sum_probs=203.5

Q ss_pred             HHHHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcC--CCccccceEeeEEecC
Q 047157          482 FQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR--THHKNLVRLLGFCSEE  559 (788)
Q Consensus       482 ~~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~hpniv~~~~~~~~~  559 (788)
                      ..+.....|.+.+.||+|+||.||+|...    +..||||++....   ...+..|.+++..  ++||||+++++++...
T Consensus        31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~  103 (337)
T 3mdy_A           31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR----GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKG  103 (337)
T ss_dssp             HHTTHHHHCEEEEEEEEETTEEEEEEEET----TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred             cccccccceEEEeEeecCCCeEEEEEEEC----CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence            34555678889999999999999999863    6789999986542   2334445555544  5999999999999877


Q ss_pred             ----CeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcc-----CCceEecCCCCCcEEeccCCCC
Q 047157          560 ----DKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC-----ETQIIHCDIKPQNVLLDLKTLD  630 (788)
Q Consensus       560 ----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-----~~~ivH~dlkp~NIll~~~~~~  630 (788)
                          ...++||||+++++|.+++...  .+++..++.++.|++.||.|||++.     ..+|+||||||+|||++     
T Consensus       104 ~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~-----  176 (337)
T 3mdy_A          104 TGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK-----  176 (337)
T ss_dssp             CGGGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEEC-----
T ss_pred             CCCCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEEC-----
Confidence                7899999999999999999543  6899999999999999999999752     34899999999999998     


Q ss_pred             CCCcEEEeecCCccccCCCCCcc---cccccCCccccCcccccCCCCCcc------CcchhhHHHHHHHHhC--------
Q 047157          631 TNYMAKISDFGISKLLNKDQTRT---DTNMRGTMGYVAPEWLRNVPVTTK------VDVFSFGVMLLEIICG--------  693 (788)
Q Consensus       631 ~~~~~kL~Dfg~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~k------~DVwSlGvil~elltg--------  693 (788)
                      .++.+||+|||++..........   .....||+.|+|||++.+...+.+      +||||||+++|||++|        
T Consensus       177 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~  256 (337)
T 3mdy_A          177 KNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVE  256 (337)
T ss_dssp             TTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred             CCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccc
Confidence            78899999999997664433221   224578999999999987766665      9999999999999999        


Q ss_pred             --CCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          694 --RRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       694 --~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                        +.||.........      ... .........   .....+.........+++.+++.+||+.||++|||+.||+++|
T Consensus       257 ~~~~p~~~~~~~~~~------~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L  326 (337)
T 3mdy_A          257 EYQLPYHDLVPSDPS------YED-MREIVCIKK---LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTL  326 (337)
T ss_dssp             CCCCTTTTTSCSSCC------HHH-HHHHHTTSC---CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred             cccccHhhhcCCCCc------hhh-hHHHHhhhc---cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHH
Confidence              5555432211110      000 111111111   1111112222346778899999999999999999999999999


Q ss_pred             hcCcCCCC
Q 047157          772 EGTLEVGM  779 (788)
Q Consensus       772 ~~~~~~~~  779 (788)
                      +++.+...
T Consensus       327 ~~l~~~~~  334 (337)
T 3mdy_A          327 AKMSESQD  334 (337)
T ss_dssp             HHHHHTTT
T ss_pred             HHHHhhcc
Confidence            98775443

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=2.6e-38  Score=340.69  Aligned_cols=258  Identities=28%  Similarity=0.431  Sum_probs=203.6

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ..|.+.+.||+|+||.||+|.....+....+++|.+.... ....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            4577889999999999999998744444456999886532 34456789999999999 899999999999999999999


Q ss_pred             EecCCCCCHhHhhhccC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCC
Q 047157          566 YELMPNGTLSNFLFHEG---------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD  630 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~  630 (788)
                      |||+++++|.+++....               ..+++..++.++.||+.||.|||++   +|+||||||+|||++     
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-----  176 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG-----  176 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEc-----
Confidence            99999999999996543               4689999999999999999999999   999999999999998     


Q ss_pred             CCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccc
Q 047157          631 TNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEV  709 (788)
Q Consensus       631 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~  709 (788)
                      .++.+||+|||++.......  ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+.    
T Consensus       177 ~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~----  250 (327)
T 1fvr_A          177 ENYVAKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL----  250 (327)
T ss_dssp             GGGCEEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH----
T ss_pred             CCCeEEEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHH----
Confidence            77899999999987433211  1223456789999999998889999999999999999998 9999975432111    


Q ss_pred             hhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          710 DIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       710 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                              ........         ...........+.+++.+||+.||++|||++|+++.|+.+.+
T Consensus       251 --------~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  300 (327)
T 1fvr_A          251 --------YEKLPQGY---------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  300 (327)
T ss_dssp             --------HHHGGGTC---------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --------HHHhhcCC---------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence                    11111110         001111234568889999999999999999999999987654

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=3.4e-38  Score=332.86  Aligned_cols=253  Identities=25%  Similarity=0.358  Sum_probs=198.8

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ..|.+.+.||+|+||+||++...  .++..+|+|.+.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   99 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEER--SSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM   99 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEET--TTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheeecceeccCCCeEEEEEEEc--cCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence            46788899999999999999876  667789999986543 234578899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhcc---CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          567 ELMPNGTLSNFLFHE---GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       567 e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      ||+++++|.+++...   +..+++..+..++.||+.||.|||++   +|+||||||+||+++...  .++.+||+|||++
T Consensus       100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~--~~~~~kl~Dfg~a  174 (285)
T 3is5_A          100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTS--PHSPIKIIDFGLA  174 (285)
T ss_dssp             CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSS--TTCCEEECCCCCC
T ss_pred             EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCC--CCCCEEEEeeecc
Confidence            999999999998543   46789999999999999999999999   999999999999996432  5678999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ........  .....+++.|+|||.+. ..++.++||||||+++|||++|+.||......+...        ..  ....
T Consensus       175 ~~~~~~~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~--------~~--~~~~  241 (285)
T 3is5_A          175 ELFKSDEH--STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQ--------KA--TYKE  241 (285)
T ss_dssp             CC------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--------HH--HHCC
T ss_pred             eecCCccc--CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHh--------hh--ccCC
Confidence            87644322  23456899999999886 478999999999999999999999997653221110        00  0000


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ....      ..   .....+.+.+++.+||+.||++|||++||++
T Consensus       242 ~~~~------~~---~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          242 PNYA------VE---CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             CCCC------C-----CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             cccc------cc---cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0000      00   0012356778999999999999999999986

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=1.8e-38  Score=341.13  Aligned_cols=261  Identities=24%  Similarity=0.420  Sum_probs=209.1

Q ss_pred             HHhhcccccccccccceEEEEEEec---cCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      ...|.+.+.||+|+||.||+|....   ...+..||+|.+.... ......+.+|++++++++||||+++++++.+.+..
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~  103 (322)
T 1p4o_A           24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT  103 (322)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence            4557788999999999999998752   2346789999986543 34456789999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccC---------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCC
Q 047157          563 LLVYELMPNGTLSNFLFHEG---------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNY  633 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~  633 (788)
                      ++||||+++++|.+++....         ..+++..++.++.||+.||.|||++   +|+||||||+||+++     .++
T Consensus       104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~-----~~~  175 (322)
T 1p4o_A          104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA-----EDF  175 (322)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEEC-----TTC
T ss_pred             EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEc-----CCC
Confidence            99999999999999996532         4568999999999999999999999   999999999999998     788


Q ss_pred             cEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchh
Q 047157          634 MAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDI  711 (788)
Q Consensus       634 ~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~  711 (788)
                      .+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+.      
T Consensus       176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~------  249 (322)
T 1p4o_A          176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV------  249 (322)
T ss_dssp             CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH------
T ss_pred             eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHH------
Confidence            9999999999865433221 2223456889999999998899999999999999999999 8899875432111      


Q ss_pred             hhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          712 VLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       712 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                            ...........         ........+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus       250 ------~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          250 ------LRFVMEGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             ------HHHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             ------HHHHHcCCcCC---------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence                  11111111111         011234567889999999999999999999999988754

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=3e-38  Score=334.33  Aligned_cols=257  Identities=26%  Similarity=0.391  Sum_probs=205.3

Q ss_pred             Hhhcccc-cccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          488 ATKGFSK-LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       488 ~t~~~~~-~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ..|.+.+ .||+|+||+||+|.+.....+..||||.+....  ....+++.+|++++++++||||+++++++ +.+..++
T Consensus        16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l   94 (291)
T 1xbb_A           16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML   94 (291)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred             hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence            3455666 899999999999987666777899999987543  33467899999999999999999999999 5677899


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++++|.+++... ..+++..++.++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++.
T Consensus        95 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~-----~~~~~kl~Dfg~~~  165 (291)
T 1xbb_A           95 VMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLV-----TQHYAKISDFGLSK  165 (291)
T ss_dssp             EEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE-----ETTEEEECCCTTCE
T ss_pred             EEEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEe-----CCCcEEEccCCcce
Confidence            99999999999999664 5689999999999999999999999   999999999999998     77899999999998


Q ss_pred             ccCCCCCcc--cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHh
Q 047157          645 LLNKDQTRT--DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       645 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      .........  .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+.            ....
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~------------~~~~  233 (291)
T 1xbb_A          166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV------------TAML  233 (291)
T ss_dssp             ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH------------HHHH
T ss_pred             eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH------------HHHH
Confidence            765443322  222346788999999998889999999999999999999 9999976432111            1111


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ......         .........+.+++.+||+.||++|||+.+|++.|+++.
T Consensus       234 ~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  278 (291)
T 1xbb_A          234 EKGERM---------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  278 (291)
T ss_dssp             HTTCCC---------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HcCCCC---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            111100         011123467888999999999999999999999998765

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=4.5e-39  Score=346.54  Aligned_cols=273  Identities=23%  Similarity=0.371  Sum_probs=212.2

Q ss_pred             HHHhhcccccccccccceEEEEEEe--ccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCC--e
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILR--LKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED--K  561 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~--~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~  561 (788)
                      ....+.+.+.||+|+||.||++...  ...++..||||++........+.+.+|++++++++||||+++++++...+  .
T Consensus        39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  118 (326)
T 2w1i_A           39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN  118 (326)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred             CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence            3455778899999999999999853  23567899999998766667788999999999999999999999987654  7


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      .++||||+++++|.+++......+++..++.++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||
T Consensus       119 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~-----~~~~~kL~Dfg  190 (326)
T 2w1i_A          119 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVE-----NENRVKIGDFG  190 (326)
T ss_dssp             CEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEE-----ETTEEEECCCT
T ss_pred             eEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEc-----CCCcEEEecCc
Confidence            8999999999999999988777799999999999999999999999   999999999999998     77899999999


Q ss_pred             CccccCCCCCc--ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCcccccccc----ccchhhhHH
Q 047157          642 ISKLLNKDQTR--TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEES----EEVDIVLSD  715 (788)
Q Consensus       642 ~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~----~~~~~~~~~  715 (788)
                      ++.........  ......++..|+|||.+.+..++.++||||||+++|||++|+.|+.........    .........
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (326)
T 2w1i_A          191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF  270 (326)
T ss_dssp             TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHH
T ss_pred             chhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHH
Confidence            99877544322  122345677899999999888999999999999999999999988643211000    000000000


Q ss_pred             HHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          716 WVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       716 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      .........         ...........++.+++.+||+.||++|||++||++.|+.+.
T Consensus       271 ~~~~~~~~~---------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~  321 (326)
T 2w1i_A          271 HLIELLKNN---------GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR  321 (326)
T ss_dssp             HHHHHHHTT---------CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHhhcC---------CCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            111111111         111111223467888999999999999999999999998764

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1.5e-38  Score=341.01  Aligned_cols=262  Identities=25%  Similarity=0.359  Sum_probs=189.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .|.+.+.||+|+||+||+|...  .++..||+|.+.... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            6 QFKQLEKLGNGTYATVYKGLNK--TTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             -------------CEEEEEECS--SSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ceeEeeEECCCCCEEEEEEEEC--CCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            4667789999999999999876  667899999986543 2234678899999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhcc-----CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          568 LMPNGTLSNFLFHE-----GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       568 ~~~~gsL~~~l~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      |++ ++|.+++...     ...+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~-----~~~~~kl~Dfg~  154 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLIN-----KRGQLKLGDFGL  154 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC-----TTCCEEECCCSS
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEc-----CCCCEEECcCcc
Confidence            997 5999988643     24588999999999999999999999   999999999999998     788999999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      +........ ......+|+.|+|||++.+ ..++.++||||||+++|||++|+.||......+...        ......
T Consensus       155 ~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~--------~i~~~~  225 (317)
T 2pmi_A          155 ARAFGIPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLK--------LIFDIM  225 (317)
T ss_dssp             CEETTSCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--------HHHHHH
T ss_pred             ceecCCCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH--------HHHHHh
Confidence            987643322 2233568999999999876 468999999999999999999999997653322110        011100


Q ss_pred             hcc---c---cccccc------CC-CCCc-------ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          722 LSR---N---LQVLVS------HD-PEVL-------SDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       722 ~~~---~---~~~l~~------~~-~~~~-------~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ...   .   ...+..      .. +...       ........+.+++.+||+.||++|||++|+++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  294 (317)
T 2pmi_A          226 GTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH  294 (317)
T ss_dssp             CSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             CCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence            000   0   000000      00 0000       000123578899999999999999999999863

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=4.3e-38  Score=353.73  Aligned_cols=247  Identities=26%  Similarity=0.299  Sum_probs=193.7

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||.||++...  .++..||||.+....   ......+.+|++++++++||||+++++++.+.+..++|
T Consensus       149 ~y~~~~~lG~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          149 EFEYLKLLGKGTFGKVILVKEK--ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             HcEEeEEEeeCcCEEEEEEEEc--CCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            4677899999999999999886  677899999997542   33446778999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhh-ccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE-ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |||+++++|.+++... ..+++..+..++.||+.||+|||+ +   +|+||||||+|||++     .++.+||+|||+++
T Consensus       227 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~-----~~~~~kl~DFG~a~  297 (446)
T 4ejn_A          227 MEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLD-----KDGHIKITDFGLCK  297 (446)
T ss_dssp             ECCCSSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEEC-----SSSCEEECCCCCCC
T ss_pred             EeeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEEC-----CCCCEEEccCCCce
Confidence            9999999999999654 578999999999999999999998 7   999999999999998     78899999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||........            .......
T Consensus       298 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~------------~~~i~~~  364 (446)
T 4ejn_A          298 EGIKDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL------------FELILME  364 (446)
T ss_dssp             TTCC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHHHC
T ss_pred             eccCCCc-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH------------HHHHHhC
Confidence            6433222 23346799999999999999999999999999999999999999975432211            0111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIH  769 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~  769 (788)
                      ...        .  +......+.+++.+||+.||++||     +++|+++
T Consensus       365 ~~~--------~--p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          365 EIR--------F--PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             CCC--------C--CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             CCC--------C--CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence            110        0  011235678899999999999999     9999986

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=3.2e-38  Score=337.23  Aligned_cols=261  Identities=21%  Similarity=0.323  Sum_probs=198.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc---hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD---IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||.||+|...  .++..||+|.+...   .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        33 ~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           33 NFRIEKKIGRGQFSEVYRAACL--LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GEEEEEEEECC--CEEEEEEET--TTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ceEEEEeecCCCCceEEEEEEc--CCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            5778899999999999999876  56779999988642   245567899999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          566 YELMPNGTLSNFLFH---EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      |||+++++|.+++..   ....+++..++.++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||+
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~-----~~~~~kl~Dfg~  182 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFIT-----ATGVVKLGDLGL  182 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC-----TTSCEEECCC--
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEc-----CCCCEEEEeccc
Confidence            999999999999864   356689999999999999999999999   999999999999998     788999999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      +........ ......+++.|+|||.+.+..++.++||||||+++|||++|+.||.......         .... ....
T Consensus       183 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---------~~~~-~~~~  251 (310)
T 2wqm_A          183 GRFFSSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL---------YSLC-KKIE  251 (310)
T ss_dssp             -----------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH---------HHHH-HHHH
T ss_pred             eeeecCCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH---------HHHH-HHhh
Confidence            986643322 1223568999999999999999999999999999999999999996542111         0000 1111


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCCC
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVG  778 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~~  778 (788)
                      .......        ......+.+.+++.+||+.||++|||+++|++.|+++.+..
T Consensus       252 ~~~~~~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~  299 (310)
T 2wqm_A          252 QCDYPPL--------PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT  299 (310)
T ss_dssp             TTCSCCC--------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             cccCCCC--------cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence            1111111        01123456888999999999999999999999999886543

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=7.3e-39  Score=367.49  Aligned_cols=262  Identities=25%  Similarity=0.409  Sum_probs=210.0

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      +....+.+.++||+|+||.||+|.+.   ....||||.+.... ...++|.+|+++|++++||||+++++++.+ +..+|
T Consensus       264 i~~~~~~~~~~lG~G~fg~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~l  338 (535)
T 2h8h_A          264 IPRESLRLEVKLGQGCFGEVWMGTWN---GTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI  338 (535)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET---TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred             cchhhhhhheecccCCCeEEEEEEEC---CCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceE
Confidence            33455677899999999999999885   34579999997543 235689999999999999999999999876 67899


Q ss_pred             EEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          565 VYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      ||||+++|+|.+++... +..+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++
T Consensus       339 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~-----~~~~~kl~DFG~a  410 (535)
T 2h8h_A          339 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG-----ENLVCKVADFGLA  410 (535)
T ss_dssp             EECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC-----GGGCEEECCTTST
T ss_pred             eeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEc-----CCCcEEEcccccc
Confidence            99999999999999753 35689999999999999999999999   999999999999998     7789999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      +..............++..|+|||.+....++.++||||||+++|||++ |+.||......+.            ...+.
T Consensus       411 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~------------~~~i~  478 (535)
T 2h8h_A          411 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV------------LDQVE  478 (535)
T ss_dssp             TTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHH------------HHHHH
T ss_pred             eecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH------------HHHHH
Confidence            8765332222233456788999999998899999999999999999999 8999975432111            11111


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCCCCC
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMP  780 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~~~p  780 (788)
                      .+.         .........+.+.+|+.+||+.||++|||+++|+++|+.+.....|
T Consensus       479 ~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~  527 (535)
T 2h8h_A          479 RGY---------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP  527 (535)
T ss_dssp             TTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSC
T ss_pred             cCC---------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCc
Confidence            110         0011112345788899999999999999999999999998765443

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=1.4e-37  Score=349.73  Aligned_cols=250  Identities=23%  Similarity=0.348  Sum_probs=204.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchH---HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||.||+|.+.  .++..||||.+.....   ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus        17 ~Y~l~~~LG~G~fg~V~~a~~~--~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           17 HYILGDTLGVGTFGKVKVGKHE--LTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             TEEEEEEEECCSSSCEEEEEET--TTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CEEEEEEEeeCCCeEEEEEEEC--CCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            4667899999999999999886  5778999999975432   2356789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++..
T Consensus        95 ~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~-----~~~~vkL~DFG~a~~  165 (476)
T 2y94_A           95 MEYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLD-----AHMNAKIADFGLSNM  165 (476)
T ss_dssp             EECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEC-----TTCCEEECCCSSCEE
T ss_pred             EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEe-----cCCCeEEEeccchhh
Confidence            9999999999999654 5689999999999999999999999   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCC-CccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ......  .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||........            ......+
T Consensus       166 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~------------~~~i~~~  231 (476)
T 2y94_A          166 MSDGEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL------------FKKICDG  231 (476)
T ss_dssp             CCTTCC--BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH------------HHHHHTT
T ss_pred             cccccc--ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH------------HHHHhcC
Confidence            654322  234579999999999988765 6899999999999999999999975432111            1111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH--Hhhc
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH--MLEG  773 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~--~L~~  773 (788)
                      ...     .+.     .....+.+++.+||+.||++|||++|+++  .+.+
T Consensus       232 ~~~-----~p~-----~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~  272 (476)
T 2y94_A          232 IFY-----TPQ-----YLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ  272 (476)
T ss_dssp             CCC-----CCT-----TCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred             CcC-----CCc-----cCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhh
Confidence            110     011     12346788999999999999999999997  4544

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=4.3e-38  Score=329.00  Aligned_cols=251  Identities=24%  Similarity=0.335  Sum_probs=201.6

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecC--CeEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE--DKRL  563 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~~~  563 (788)
                      ..|.+.+.||+|+||.||+|.+.    +..||||.+...  .....+.+.+|+.++++++||||+++++++.+.  +..+
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   85 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ----GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT   85 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET----TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCE
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC----CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeE
Confidence            35677899999999999999873    568999988643  245567899999999999999999999999887  7889


Q ss_pred             EEEecCCCCCHhHhhhccCC-CCCHHHHHHHHHHHHHHHHHhhhccCCc--eEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          564 LVYELMPNGTLSNFLFHEGQ-RPGWVQRVEIALGVARGLLYLHEECETQ--IIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      +||||+++++|.+++..... .+++..++.++.||+.||.|||++   +  |+||||||+||+++     .++.++|+||
T Consensus        86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~-----~~~~~~l~~~  157 (271)
T 3kmu_A           86 LITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMID-----EDMTARISMA  157 (271)
T ss_dssp             EEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEEC-----TTSCEEEEGG
T ss_pred             eeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEc-----CCcceeEEec
Confidence            99999999999999976543 589999999999999999999998   7  99999999999998     7888999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccCCCCCc---cCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTT---KVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV  717 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~---k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~  717 (788)
                      |++.....      ....+|+.|+|||.+.+...+.   ++||||||+++|||++|+.||........           .
T Consensus       158 ~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-----------~  220 (271)
T 3kmu_A          158 DVKFSFQS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-----------G  220 (271)
T ss_dssp             GSCCTTSC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-----------H
T ss_pred             cceeeecc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-----------H
Confidence            88764322      2346789999999998765554   79999999999999999999975432111           0


Q ss_pred             HHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       718 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ........ .        ..........+.+++..||+.||++|||++|+++.|+++.+
T Consensus       221 ~~~~~~~~-~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          221 MKVALEGL-R--------PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             HHHHHSCC-C--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             HHHHhcCC-C--------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            01111110 0        01111234568889999999999999999999999987653

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=3.1e-38  Score=334.70  Aligned_cols=265  Identities=20%  Similarity=0.294  Sum_probs=204.7

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEE-ecCCeEEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFC-SEEDKRLLVY  566 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-~~~~~~~lV~  566 (788)
                      ..|.+.+.||+|+||+||+|...  .++..||||.+....  ..+.+.+|++++++++|++++..+..+ .+.+..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGTDI--AAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEEET--TTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CceEEeeeecCCCCeEEEEEEEc--CCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            45778899999999999999876  677899999865432  234678899999999888877666655 6778889999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+ +++|.+++......+++..+..++.||+.||.|||++   +|+||||||+|||++...  .++.+||+|||++...
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~--~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A           85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGK--KGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGG--GTTCEEECCCTTCEEC
T ss_pred             Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccC--CCCeEEEecCccceec
Confidence            999 9999999987677899999999999999999999999   999999999999993211  6788999999999876


Q ss_pred             CCCCC------cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          647 NKDQT------RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       647 ~~~~~------~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      .....      .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.............    . ....
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~----~-~~~~  233 (296)
T 4hgt_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYE----R-ISEK  233 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHH----H-HHHH
T ss_pred             cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhh----h-hhcc
Confidence            54332      12234678999999999999999999999999999999999999997653322211111    0 0000


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ........+.         ....+.+.+++.+||+.||++|||+++|++.|+++..
T Consensus       234 ~~~~~~~~~~---------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~  280 (296)
T 4hgt_A          234 KMSTPIEVLC---------KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  280 (296)
T ss_dssp             HHHSCHHHHT---------TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred             cccchhhhhh---------ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence            0000000000         0123578899999999999999999999999987654

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=3.2e-38  Score=338.14  Aligned_cols=265  Identities=21%  Similarity=0.269  Sum_probs=197.5

Q ss_pred             hcc-cccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEEe
Q 047157          490 KGF-SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~-~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      |.+ .+.||+|+||+||+|...  .++..||||.+........+.+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus        14 y~i~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           14 YQLQEDVLGEGAHARVQTCINL--ITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             CEECCCCCCCCSSEEEEEEECS--SSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             EEecCceecCCceEEEEEEEEc--CCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            445 368999999999999875  56779999999766555677899999999885 79999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++..+  ....+||+|||++....
T Consensus        92 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~--~~~~~kl~Dfg~~~~~~  165 (316)
T 2ac3_A           92 KMRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPN--QVSPVKICDFDLGSGIK  165 (316)
T ss_dssp             CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSS--SSCSEEECCTTCCC---
T ss_pred             cCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCC--CcCceEEEEccCccccc
Confidence            99999999999665 5688999999999999999999999   999999999999998332  23359999999998654


Q ss_pred             CCCC------cccccccCCccccCcccccC-----CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchh---hh
Q 047157          648 KDQT------RTDTNMRGTMGYVAPEWLRN-----VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI---VL  713 (788)
Q Consensus       648 ~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~---~~  713 (788)
                      ....      .......||+.|+|||++.+     ..++.++||||||+++|||++|+.||......+.......   ..
T Consensus       166 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  245 (316)
T 2ac3_A          166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC  245 (316)
T ss_dssp             ----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHH
T ss_pred             cCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhH
Confidence            2211      11223468999999999865     5688999999999999999999999976533221100000   00


Q ss_pred             HHHHHHHhhcccccccccCCCCCccc--HHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          714 SDWVISCMLSRNLQVLVSHDPEVLSD--LERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       714 ~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .............        .....  ......+.+++.+||+.||++|||++|++++
T Consensus       246 ~~~~~~~i~~~~~--------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          246 QNMLFESIQEGKY--------EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             HHHHHHHHHHCCC--------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHHHhccCc--------ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            0001111111111        10000  1124568899999999999999999999984

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=9.6e-38  Score=329.03  Aligned_cols=253  Identities=21%  Similarity=0.304  Sum_probs=203.9

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .|.+.+.||+|+||.||+|...  .++..||+|.+....  ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            7 NYDVKEELGKGAFSVVRRCVHK--TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhcCcCCeEEEEEEEc--CCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            4677899999999999999886  667799999986542  345578889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+||+++.+.  ....+||+|||++...
T Consensus        85 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~--~~~~~kl~Dfg~~~~~  158 (284)
T 3kk8_A           85 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKA--KGAAVKLADFGLAIEV  158 (284)
T ss_dssp             CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSS--TTCCEEECCCTTCEEC
T ss_pred             ecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCC--CCCcEEEeeceeeEEc
Confidence            999999999988655 5689999999999999999999999   999999999999998433  3456999999999876


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      .....  .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||........            .........
T Consensus       159 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~------------~~~~~~~~~  224 (284)
T 3kk8_A          159 NDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL------------YAQIKAGAY  224 (284)
T ss_dssp             CSSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHHHTCC
T ss_pred             ccCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHH------------HHHHHhccc
Confidence            54322  2345789999999999999999999999999999999999999975432211            011111111


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ...   .+   ......+.+.+++.+||+.||++|||++|+++
T Consensus       225 ~~~---~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          225 DYP---SP---EWDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             CCC---TT---TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cCC---ch---hhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            100   00   00122356788999999999999999999987

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=6.2e-38  Score=329.72  Aligned_cols=246  Identities=25%  Similarity=0.366  Sum_probs=199.4

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||+||+|...  .++..||+|.+....   ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A           10 DFEIGRPLGKGKFGNVYLAREK--QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cEEEeeEEecCCCeEEEEEEEc--cCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            4667799999999999999886  667789999986533   22356789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++..
T Consensus        88 ~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~-----~~~~~~l~Dfg~~~~  158 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLG-----SAGELKIADFGWSVH  158 (279)
T ss_dssp             ECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEEC-----TTSCEEECSCCEESC
T ss_pred             EecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEc-----CCCCEEEEecccccc
Confidence            9999999999999655 5688999999999999999999998   999999999999998     788999999999865


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      .....   .....+++.|+|||.+.+..++.++||||||+++|+|++|+.||......+..            .......
T Consensus       159 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------------~~~~~~~  223 (279)
T 3fdn_A          159 APSSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY------------KRISRVE  223 (279)
T ss_dssp             C-----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH------------HHHHHTC
T ss_pred             CCccc---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHH------------HHHHhCC
Confidence            43322   23356899999999999999999999999999999999999999754322110            0011100


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .        .  .+....+.+.+++.+||+.||++|||++|++++
T Consensus       224 ~--------~--~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          224 F--------T--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             C--------C--CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             C--------C--CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            0        0  011123567789999999999999999999974

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=1e-37  Score=338.69  Aligned_cols=270  Identities=16%  Similarity=0.211  Sum_probs=198.9

Q ss_pred             HHHHhhcccccccccccceEEEEEEec-cCcceeeeeeecccchHH-----------HHHHHHHHHHHhcCCCccccceE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRL-KDTQIEIAVKKLEKDIEK-----------TNEEFMTELKIIGRTHHKNLVRL  552 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~l~~~~~~-----------~~~~~~~E~~~l~~l~hpniv~~  552 (788)
                      +....|.+.+.||+|+||.||+|.... ...+..+|+|........           ..+.+.+|+..++.++||||+++
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~  113 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF  113 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence            334557788999999999999999862 125678999988654211           12346788899999999999999


Q ss_pred             eeEEec----CCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCC
Q 047157          553 LGFCSE----EDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKT  628 (788)
Q Consensus       553 ~~~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~  628 (788)
                      ++++..    ....++||||+ +++|.+++...+ .+++..++.++.||+.||.|||++   +|+||||||+|||++   
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~---  185 (345)
T 2v62_A          114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLG---  185 (345)
T ss_dssp             EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE---
T ss_pred             ecccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEc---
Confidence            999987    77899999999 999999997654 789999999999999999999999   999999999999998   


Q ss_pred             CCCCC--cEEEeecCCccccCCCCC------cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCcc
Q 047157          629 LDTNY--MAKISDFGISKLLNKDQT------RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELS  700 (788)
Q Consensus       629 ~~~~~--~~kL~Dfg~a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~  700 (788)
                        .++  .+||+|||+++.+.....      .......||+.|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus       186 --~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~  263 (345)
T 2v62_A          186 --YKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQN  263 (345)
T ss_dssp             --SSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGG
T ss_pred             --cCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence              444  999999999987643221      1123457899999999999999999999999999999999999999643


Q ss_pred             ccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          701 RVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       701 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ......      ... ....... .+...+..   ........+.+.+++.+||+.||++|||+++|++.|+.+.
T Consensus       264 ~~~~~~------~~~-~~~~~~~-~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          264 LKDPVA------VQT-AKTNLLD-ELPQSVLK---WAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             TTCHHH------HHH-HHHHHHH-TTTHHHHH---HSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             ccccHH------HHH-HHHhhcc-cccHHHHh---hccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            111100      000 0000000 00000000   0000023457888999999999999999999999998754

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=3e-38  Score=343.11  Aligned_cols=253  Identities=25%  Similarity=0.334  Sum_probs=188.7

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .|.+.+.||+|+||+||+|...  .++..||||.+....  ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus        54 ~y~~~~~lG~G~~g~Vy~~~~~--~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  129 (349)
T 2w4o_A           54 FFEVESELGRGATSIVYRCKQK--GTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL  129 (349)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cEEEeeEEeeCCCEEEEEEEEC--CCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence            4667799999999999999886  567789999997543  346788999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++...  .++.+||+|||++.....
T Consensus       130 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~--~~~~~kl~Dfg~a~~~~~  203 (349)
T 2w4o_A          130 VTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPA--PDAPLKIADFGLSKIVEH  203 (349)
T ss_dssp             CCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSS--TTCCEEECCCC-------
T ss_pred             CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCC--CCCCEEEccCccccccCc
Confidence            9999999999654 5689999999999999999999999   999999999999997322  478999999999986643


Q ss_pred             CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      ..  ......||+.|+|||++.+..++.++||||||+++|||++|+.||.......           .............
T Consensus       204 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----------~~~~~i~~~~~~~  270 (349)
T 2w4o_A          204 QV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ-----------FMFRRILNCEYYF  270 (349)
T ss_dssp             -----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH-----------HHHHHHHTTCCCC
T ss_pred             cc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH-----------HHHHHHHhCCCcc
Confidence            22  2234578999999999999999999999999999999999999996542211           0111111111110


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                       ..     .........+.+++.+||+.||++|||+.|++++
T Consensus       271 -~~-----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  306 (349)
T 2w4o_A          271 -IS-----PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH  306 (349)
T ss_dssp             -CT-----TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             -CC-----chhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence             00     0011234567889999999999999999999874

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=8.6e-38  Score=329.51  Aligned_cols=259  Identities=24%  Similarity=0.333  Sum_probs=208.8

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ..|.+.+.||+|+||.||+|...  .++..||+|.+....   ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   91 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREK--QNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL   91 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEc--CCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence            45777899999999999999886  667799999986542   2234678999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++.
T Consensus        92 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~-----~~~~~kl~Dfg~~~  162 (284)
T 2vgo_A           92 MLEFAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMG-----YKGELKIADFGWSV  162 (284)
T ss_dssp             EECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEEC-----TTCCEEECCCTTCE
T ss_pred             EEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEc-----CCCCEEEecccccc
Confidence            99999999999999665 4688999999999999999999999   999999999999998     77899999999987


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ......   .....|++.|+|||.+.+..++.++||||||+++|||++|+.||......+.            .......
T Consensus       163 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------------~~~~~~~  227 (284)
T 2vgo_A          163 HAPSLR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET------------HRRIVNV  227 (284)
T ss_dssp             ECSSSC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH------------HHHHHTT
T ss_pred             cCcccc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH------------HHHHhcc
Confidence            654322   2335689999999999999999999999999999999999999975432111            0111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH--HhhcCcCCCCCCC
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH--MLEGTLEVGMPPL  782 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~--~L~~~~~~~~pp~  782 (788)
                      .        ...  +......+.+++.+||+.||++|||++|+++  .+........||.
T Consensus       228 ~--------~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~~~~p~~  277 (284)
T 2vgo_A          228 D--------LKF--PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPV  277 (284)
T ss_dssp             C--------CCC--CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCCCCCCCC
T ss_pred             c--------cCC--CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhccccCCCc
Confidence            1        000  1112356788999999999999999999996  4554444444443

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5.6e-38  Score=340.66  Aligned_cols=258  Identities=26%  Similarity=0.253  Sum_probs=198.1

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccch-----HHHHHHHHHHHHHhcCCCccccceEeeEEecCCe
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-----EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDK  561 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  561 (788)
                      ...|.+.+.||+|+||+||+|...  .++..||+|.+....     ....+.+.+|++++++++||||+++++++.+.+.
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  102 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIEN--QTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQY  102 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEET--TTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hhheeecceeeecCCeEEEEEEEC--CCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCe
Confidence            356788899999999999999876  667799999886542     3455789999999999999999999999999999


Q ss_pred             EEEEEecCCCCCHhHhhhcc---------------------------------------CCCCCHHHHHHHHHHHHHHHH
Q 047157          562 RLLVYELMPNGTLSNFLFHE---------------------------------------GQRPGWVQRVEIALGVARGLL  602 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~---------------------------------------~~~~~~~~~~~i~~qi~~aL~  602 (788)
                      .++||||+++++|.+++...                                       ...+++..+..++.||+.||.
T Consensus       103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~  182 (345)
T 3hko_A          103 ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALH  182 (345)
T ss_dssp             EEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHH
Confidence            99999999999999998421                                       111256778889999999999


Q ss_pred             HhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCC---CcccccccCCccccCcccccC--CCCCcc
Q 047157          603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ---TRTDTNMRGTMGYVAPEWLRN--VPVTTK  677 (788)
Q Consensus       603 ~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~--~~~s~k  677 (788)
                      |||++   +|+||||||+|||++.+   ....+||+|||++..+....   ........||+.|+|||.+.+  ..++.+
T Consensus       183 ~LH~~---~ivH~Dlkp~NIll~~~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  256 (345)
T 3hko_A          183 YLHNQ---GICHRDIKPENFLFSTN---KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK  256 (345)
T ss_dssp             HHHHT---TEECCCCCGGGEEESCS---SSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred             HHHHC---CccccCCChhhEEEecC---CCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence            99999   99999999999999721   23489999999998654322   122344678999999999865  678999


Q ss_pred             CcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCC
Q 047157          678 VDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPD  757 (788)
Q Consensus       678 ~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~d  757 (788)
                      +||||||+++|||++|+.||......+..            .........      ............+.+++.+||+.|
T Consensus       257 ~DiwslG~il~el~~g~~pf~~~~~~~~~------------~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~  318 (345)
T 3hko_A          257 CDAWSAGVLLHLLLMGAVPFPGVNDADTI------------SQVLNKKLC------FENPNYNVLSPLARDLLSNLLNRN  318 (345)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHH------------HHHHHCCCC------TTSGGGGGSCHHHHHHHHHHSCSC
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCChHHHH------------HHHHhcccc------cCCcccccCCHHHHHHHHHHcCCC
Confidence            99999999999999999999754322110            011111100      000111123457888999999999


Q ss_pred             CCCCCCHHHHHHH
Q 047157          758 PNLRPSMKKVIHM  770 (788)
Q Consensus       758 P~~RPt~~evl~~  770 (788)
                      |++|||+.|+++.
T Consensus       319 p~~Rps~~~~l~h  331 (345)
T 3hko_A          319 VDERFDAMRALQH  331 (345)
T ss_dssp             TTTSCCHHHHHHS
T ss_pred             hhHCCCHHHHhcC
Confidence            9999999999873

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=1.1e-38  Score=344.52  Aligned_cols=263  Identities=27%  Similarity=0.406  Sum_probs=208.0

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccC---cceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecC
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKD---TQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEE  559 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~---~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~  559 (788)
                      +....+.+.+.||+|+||.||+|.....+   ....||+|.+.... ....+.+.+|+++++++ +||||+++++++.+.
T Consensus        43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  122 (333)
T 2i1m_A           43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG  122 (333)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence            33456777899999999999999876321   22479999986543 34567899999999999 899999999999999


Q ss_pred             CeEEEEEecCCCCCHhHhhhcc-------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEecc
Q 047157          560 DKRLLVYELMPNGTLSNFLFHE-------------GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDL  626 (788)
Q Consensus       560 ~~~~lV~e~~~~gsL~~~l~~~-------------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  626 (788)
                      +..++||||+++++|.+++...             ...+++..++.++.||+.||.|||++   +|+||||||+|||++ 
T Consensus       123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~-  198 (333)
T 2i1m_A          123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT-  198 (333)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEE-
T ss_pred             CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEEC-
Confidence            9999999999999999999653             24578999999999999999999999   999999999999998 


Q ss_pred             CCCCCCCcEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCcccccc
Q 047157          627 KTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEE  704 (788)
Q Consensus       627 ~~~~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~  704 (788)
                          .++.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||.......
T Consensus       199 ----~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  274 (333)
T 2i1m_A          199 ----NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS  274 (333)
T ss_dssp             ----GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH
T ss_pred             ----CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH
Confidence                7889999999999866443322 2233456789999999998899999999999999999998 899997542211


Q ss_pred             ccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          705 ESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       705 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      .       ....    .... ..        ...+....+.+.+++.+||+.||++|||++||+++|+.+.
T Consensus       275 ~-------~~~~----~~~~-~~--------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~  325 (333)
T 2i1m_A          275 K-------FYKL----VKDG-YQ--------MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA  325 (333)
T ss_dssp             H-------HHHH----HHHT-CC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             H-------HHHH----HhcC-CC--------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence            0       1111    1111 00        0001112456788999999999999999999999998653

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=5.8e-38  Score=338.90  Aligned_cols=243  Identities=22%  Similarity=0.321  Sum_probs=200.9

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchH--------HHHHHHHHHHHHhcCCCccccceEeeEEec
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE--------KTNEEFMTELKIIGRTHHKNLVRLLGFCSE  558 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~hpniv~~~~~~~~  558 (788)
                      ...|.+.+.||+|+||+||+|...  .++..||||.+.....        ...+.+.+|++++++++||||+++++++.+
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~  100 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDK--EKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN  100 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEET--TTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             ccceEEEeEEEecCCEEEEEEEEC--CCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence            456778899999999999999876  6778999999865421        133467789999999999999999999999


Q ss_pred             CCeEEEEEecCCCC-CHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          559 EDKRLLVYELMPNG-TLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       559 ~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                      .+..++||||+.+| +|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||
T Consensus       101 ~~~~~lv~e~~~~g~~l~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~-----~~~~~kL  171 (335)
T 3dls_A          101 QGFFQLVMEKHGSGLDLFAFIDRH-PRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIA-----EDFTIKL  171 (335)
T ss_dssp             SSEEEEEEECCTTSCBHHHHHHTC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----TTSCEEE
T ss_pred             CCEEEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEc-----CCCcEEE
Confidence            99999999999777 999998654 5689999999999999999999999   999999999999998     7889999


Q ss_pred             eecCCccccCCCCCcccccccCCccccCcccccCCCC-CccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHH
Q 047157          638 SDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDW  716 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~  716 (788)
                      +|||++........  .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.......            
T Consensus       172 ~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~------------  237 (335)
T 3dls_A          172 IDFGSAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV------------  237 (335)
T ss_dssp             CCCTTCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT------------
T ss_pred             eecccceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH------------
Confidence            99999987654332  233568999999999988777 789999999999999999999996431100            


Q ss_pred             HHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          717 VISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       717 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                                ..... .+     ....+.+.+++.+||+.||++|||++|+++.
T Consensus       238 ----------~~~~~-~~-----~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          238 ----------EAAIH-PP-----YLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             ----------TTCCC-CS-----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             ----------hhccC-CC-----cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                      00000 01     1123567889999999999999999999985

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=7.9e-38  Score=336.01  Aligned_cols=257  Identities=22%  Similarity=0.291  Sum_probs=204.2

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHH------HHHHHHHHHHHhcCCCccccceEeeEEecCC
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK------TNEEFMTELKIIGRTHHKNLVRLLGFCSEED  560 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  560 (788)
                      ...|.+.+.||+|+||.||++...  .++..||+|.+......      ..+.+.+|+.++++++||||+++++++.+.+
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   88 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREK--STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT   88 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hccEEEeeEeeecCCEEEEEEEEC--CCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence            456888899999999999999886  66779999998654321      3578999999999999999999999999999


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ..++||||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+||+++..+. ....+||+||
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~-~~~~~kl~Df  163 (321)
T 2a2a_A           89 DVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNI-PIPHIKLIDF  163 (321)
T ss_dssp             EEEEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTS-SSCCEEECCC
T ss_pred             EEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCC-CcCCEEEccC
Confidence            999999999999999999653 5688999999999999999999999   9999999999999982210 1127999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      |++........  .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||......+..            ..
T Consensus       164 g~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~------------~~  229 (321)
T 2a2a_A          164 GLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------------AN  229 (321)
T ss_dssp             TTCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH------------HH
T ss_pred             ccceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHH------------HH
Confidence            99987654322  23456899999999999999999999999999999999999999754321110            00


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ......      ...........+.+.+++.+||+.||++|||++|++++
T Consensus       230 i~~~~~------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h  273 (321)
T 2a2a_A          230 ITSVSY------DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH  273 (321)
T ss_dssp             HHTTCC------CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred             HHhccc------ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            111000      00000001123567889999999999999999999873

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=7.2e-38  Score=334.24  Aligned_cols=266  Identities=23%  Similarity=0.268  Sum_probs=197.6

Q ss_pred             HHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccch-----HHHHHHHHHHHHHhcCC---CccccceEeeE
Q 047157          484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-----EKTNEEFMTELKIIGRT---HHKNLVRLLGF  555 (788)
Q Consensus       484 ~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l---~hpniv~~~~~  555 (788)
                      ++....|.+.+.||+|+||+||+|...  .++..||||.+....     ......+.+|+++++++   +||||++++++
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~   82 (308)
T 3g33_A            5 SMATSRYEPVAEIGVGAYGTVYKARDP--HSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDV   82 (308)
T ss_dssp             -----CCEEEEEECCSSSCCEEEEECT--TTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEE
T ss_pred             cccccceEEEEEEecCCCeEEEEEEEC--CCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeee
Confidence            344567888899999999999999875  667799999986432     11224556777777666   49999999999


Q ss_pred             EecCC-----eEEEEEecCCCCCHhHhhhccCC-CCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCC
Q 047157          556 CSEED-----KRLLVYELMPNGTLSNFLFHEGQ-RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL  629 (788)
Q Consensus       556 ~~~~~-----~~~lV~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~  629 (788)
                      +....     ..++||||+. ++|.+++..... .+++..+..++.||+.||+|||++   +|+||||||+|||++    
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~----  154 (308)
T 3g33_A           83 CATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVT----  154 (308)
T ss_dssp             EEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEEC----
T ss_pred             eeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEc----
Confidence            97765     5799999996 599999976543 489999999999999999999999   999999999999998    


Q ss_pred             CCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccc
Q 047157          630 DTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEV  709 (788)
Q Consensus       630 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~  709 (788)
                       .++.+||+|||++........  .....||+.|+|||.+.+..++.++||||||+++|||++|+.||......+...  
T Consensus       155 -~~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~--  229 (308)
T 3g33_A          155 -SGGTVKLADFGLARIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG--  229 (308)
T ss_dssp             -TTSCEEECSCSCTTTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHH--
T ss_pred             -CCCCEEEeeCccccccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--
Confidence             788999999999987643322  234578999999999999999999999999999999999999997653322111  


Q ss_pred             hhhhHHHHHHHhhc---cccccccc-----CCCCCccc-----HHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          710 DIVLSDWVISCMLS---RNLQVLVS-----HDPEVLSD-----LERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       710 ~~~~~~~~~~~~~~---~~~~~l~~-----~~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                            ........   ........     ........     .+..+.+.+++.+||+.||++|||+.|++++
T Consensus       230 ------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  297 (308)
T 3g33_A          230 ------KIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH  297 (308)
T ss_dssp             ------HHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ------HHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence                  01111100   00000000     00000000     1234678899999999999999999999864

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=5e-38  Score=343.51  Aligned_cols=245  Identities=27%  Similarity=0.316  Sum_probs=190.7

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHH-hcCCCccccceEeeEEecCCeEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKI-IGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~-l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      ..|.+.+.||+|+||.||++..+  .++..||||.+.+..   ....+.+.+|..+ ++.++||||+++++++.+.+..+
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~--~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~  115 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHK--AEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY  115 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEET--TTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEc--CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence            35677899999999999999886  677799999997543   2334566778776 57789999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +||||+++|+|.+++.+. ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++
T Consensus       116 lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~-----~~g~ikL~DFG~a  186 (373)
T 2r5t_A          116 FVLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLD-----SQGHIVLTDFGLC  186 (373)
T ss_dssp             EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC-----TTSCEEECCCCBC
T ss_pred             EEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEC-----CCCCEEEeeCccc
Confidence            999999999999999654 5678889999999999999999999   999999999999998     7889999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      +...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+.            ...+..
T Consensus       187 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~------------~~~i~~  253 (373)
T 2r5t_A          187 KENIEHN-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM------------YDNILN  253 (373)
T ss_dssp             GGGBCCC-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHH------------HHHHHH
T ss_pred             cccccCC-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH------------HHHHHh
Confidence            8643222 223346799999999999999999999999999999999999999976432211            111111


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHH
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKK  766 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e  766 (788)
                      ..+        ...  ......+.+++.+||+.||++||++.+
T Consensus       254 ~~~--------~~~--~~~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          254 KPL--------QLK--PNITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             SCC--------CCC--SSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             ccc--------CCC--CCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence            111        110  112356788999999999999999853

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=6e-38  Score=335.26  Aligned_cols=270  Identities=21%  Similarity=0.259  Sum_probs=199.4

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .|.+.+.||+|+||+||+|...  .++..||+|++....  ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus         4 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (311)
T 4agu_A            4 KYEKIGKIGEGSYGVVFKCRNR--DTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF   81 (311)
T ss_dssp             CEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEeeEEeecCCeEEEEEEeC--CCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence            4667799999999999999886  667799999875432  344577889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++... ..+++..+..++.|++.||.|||++   +|+||||||+||+++     .++.+||+|||++...
T Consensus        82 e~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~-----~~~~~kl~Dfg~~~~~  152 (311)
T 4agu_A           82 EYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILIT-----KHSVIKLCDFGFARLL  152 (311)
T ss_dssp             ECCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----TTSCEEECCCTTCEEC
T ss_pred             EeCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEc-----CCCCEEEeeCCCchhc
Confidence            999999999887543 5689999999999999999999999   999999999999998     7889999999999876


Q ss_pred             CCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh----hHHHHHHHh
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV----LSDWVISCM  721 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~----~~~~~~~~~  721 (788)
                      ...... .....+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||......+........    .........
T Consensus       153 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (311)
T 4agu_A          153 TGPSDY-YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFS  231 (311)
T ss_dssp             C-------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred             cCcccc-cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccc
Confidence            533222 233568999999999875 67899999999999999999999999765433221110000    000000000


Q ss_pred             hcccccccccCCCCCccc-----HHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          722 LSRNLQVLVSHDPEVLSD-----LERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ..........+.+.....     ......+.+++.+||+.||++|||++|++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          232 TNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             TCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             cccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            000001111111111111     1234568899999999999999999999864

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=9.6e-38  Score=334.03  Aligned_cols=262  Identities=26%  Similarity=0.408  Sum_probs=198.6

Q ss_pred             HHHhhcccccccccccceEEEEEEecc-Ccceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCC--
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED--  560 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--  560 (788)
                      ....|.+.+.||+|+||.||+|..... ..+..||+|.+...  .....+.+.+|+.++++++||||+++++++.+.+  
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~  111 (313)
T 3brb_A           32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ  111 (313)
T ss_dssp             CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred             CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence            345677789999999999999987632 35668999998643  2445578999999999999999999999997755  


Q ss_pred             ---eEEEEEecCCCCCHhHhhhc-----cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCC
Q 047157          561 ---KRLLVYELMPNGTLSNFLFH-----EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTN  632 (788)
Q Consensus       561 ---~~~lV~e~~~~gsL~~~l~~-----~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~  632 (788)
                         ..++||||+++++|.+++..     ....+++..++.++.||+.||.|||++   +|+||||||+||+++     .+
T Consensus       112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~-----~~  183 (313)
T 3brb_A          112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLR-----DD  183 (313)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEEC-----TT
T ss_pred             CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEc-----CC
Confidence               35999999999999999843     345689999999999999999999999   999999999999998     78


Q ss_pred             CcEEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccch
Q 047157          633 YMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVD  710 (788)
Q Consensus       633 ~~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~  710 (788)
                      +.+||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+.     
T Consensus       184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-----  258 (313)
T 3brb_A          184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM-----  258 (313)
T ss_dssp             SCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH-----
T ss_pred             CcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH-----
Confidence            8999999999987644322 12233457889999999999999999999999999999999 8889875432211     


Q ss_pred             hhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          711 IVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       711 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                         ..    ........         .........+.+++.+||+.||++|||+++++++|+++.+
T Consensus       259 ---~~----~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~  308 (313)
T 3brb_A          259 ---YD----YLLHGHRL---------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE  308 (313)
T ss_dssp             ---HH----HHHTTCCC---------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---HH----HHHcCCCC---------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence               01    11111100         1111234578889999999999999999999999987653

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=2.4e-38  Score=339.06  Aligned_cols=262  Identities=27%  Similarity=0.404  Sum_probs=208.4

Q ss_pred             HHhhcccccccccccceEEEEEEec---cCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecCC-
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEED-  560 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~-  560 (788)
                      ...|.+.+.||+|+||+||+|....   ..++..||||.+.... ....+.+.+|++++.++ +||||+++++++...+ 
T Consensus        26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  105 (316)
T 2xir_A           26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  105 (316)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred             hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence            4567778999999999999998642   3466799999987543 34456899999999999 7999999999987755 


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCC---------------CCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQR---------------PGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLD  625 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~---------------~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  625 (788)
                      ..++||||+++++|.+++......               +++..++.++.||+.||.|||++   +|+||||||+||+++
T Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~  182 (316)
T 2xir_A          106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLS  182 (316)
T ss_dssp             CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred             ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEEC
Confidence            589999999999999999765432               78999999999999999999999   999999999999998


Q ss_pred             cCCCCCCCcEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccc
Q 047157          626 LKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVE  703 (788)
Q Consensus       626 ~~~~~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~  703 (788)
                           .++.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......
T Consensus       183 -----~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~  257 (316)
T 2xir_A          183 -----EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID  257 (316)
T ss_dssp             -----GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS
T ss_pred             -----CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh
Confidence                 7789999999999876543322 2234567889999999999999999999999999999998 99999754321


Q ss_pred             cccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          704 EESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       704 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ..       .    ...........         ........+.+++.+||+.||++|||++||+++|+.+++
T Consensus       258 ~~-------~----~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  310 (316)
T 2xir_A          258 EE-------F----CRRLKEGTRMR---------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  310 (316)
T ss_dssp             HH-------H----HHHHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HH-------H----HHHhccCccCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            11       0    01111111000         011123567889999999999999999999999987653

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=3.4e-38  Score=344.57  Aligned_cols=274  Identities=22%  Similarity=0.268  Sum_probs=203.7

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC-----ccccceEeeEEecC
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-----HKNLVRLLGFCSEE  559 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----hpniv~~~~~~~~~  559 (788)
                      +....|.+.++||+|+||+||+|...  .++..||||.+... ....+.+..|+++++.++     ||||+++++++...
T Consensus        32 ~~~~~y~~~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~  108 (360)
T 3llt_A           32 LLNNAFLVIRKMGDGTFGRVLLCQHI--DNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYY  108 (360)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEET
T ss_pred             EecCEEEEEEEEcccCCeEEEEEEEC--CCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeEC
Confidence            44456777899999999999999886  56779999998753 344556778998888875     99999999999999


Q ss_pred             CeEEEEEecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCC---------
Q 047157          560 DKRLLVYELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL---------  629 (788)
Q Consensus       560 ~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~---------  629 (788)
                      +..++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++   +|+||||||+|||++....         
T Consensus       109 ~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~  184 (360)
T 3llt_A          109 DHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRR  184 (360)
T ss_dssp             TEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEEC
T ss_pred             CeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhc
Confidence            9999999999 999999997653 4589999999999999999999999   9999999999999973110         


Q ss_pred             -----------CCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCC
Q 047157          630 -----------DTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIE  698 (788)
Q Consensus       630 -----------~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~  698 (788)
                                 ..++.+||+|||++.......    ....||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus       185 ~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~  260 (360)
T 3llt_A          185 VTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR  260 (360)
T ss_dssp             TTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCC
Confidence                       036789999999998654322    34578999999999999999999999999999999999999997


Q ss_pred             ccccccccccchhh---hHHHHHHHhhcccccccccC------CCCCcccHH---------------HHHHHHHHHhHcc
Q 047157          699 LSRVEEESEEVDIV---LSDWVISCMLSRNLQVLVSH------DPEVLSDLE---------------RFERMAMVGLWCN  754 (788)
Q Consensus       699 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~---------------~~~~l~~l~~~cl  754 (788)
                      .....+........   .................+..      -+.......               ..+.+.+++.+||
T Consensus       261 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L  340 (360)
T 3llt_A          261 THEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSIL  340 (360)
T ss_dssp             CSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHC
T ss_pred             CCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHh
Confidence            65332211100000   00000000000000000000      011111110               1256789999999


Q ss_pred             CCCCCCCCCHHHHHH
Q 047157          755 HPDPNLRPSMKKVIH  769 (788)
Q Consensus       755 ~~dP~~RPt~~evl~  769 (788)
                      +.||++|||++|+++
T Consensus       341 ~~dP~~Rpta~elL~  355 (360)
T 3llt_A          341 QIDPTLRPSPAELLK  355 (360)
T ss_dssp             CSSGGGSCCHHHHTT
T ss_pred             cCChhhCCCHHHHhc
Confidence            999999999999975

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=4.6e-38  Score=366.94  Aligned_cols=250  Identities=27%  Similarity=0.412  Sum_probs=200.7

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPN  571 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~  571 (788)
                      ++||+|+||.||+|.+.....+..||||+++...  ....+++.+|++++++++||||+++++++.. +..++||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            5799999999999988766777899999997543  3446789999999999999999999999965 568899999999


Q ss_pred             CCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCC
Q 047157          572 GTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT  651 (788)
Q Consensus       572 gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~  651 (788)
                      |+|.+++... ..+++..++.|+.||+.||+|||++   +|+||||||+|||++     .++.+||+|||+++.+.....
T Consensus       454 g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~-----~~~~~kL~DFGla~~~~~~~~  524 (635)
T 4fl3_A          454 GPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLV-----TQHYAKISDFGLSKALRADEN  524 (635)
T ss_dssp             EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEE-----ETTEEEECCTTHHHHTTC---
T ss_pred             CCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEe-----CCCCEEEEEcCCccccccCcc
Confidence            9999999644 6789999999999999999999999   999999999999998     778999999999987654332


Q ss_pred             c--ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          652 R--TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       652 ~--~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      .  ......+++.|+|||++.+..++.++||||||+++|||++ |+.||......+.            ...+..+..  
T Consensus       525 ~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~------------~~~i~~~~~--  590 (635)
T 4fl3_A          525 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV------------TAMLEKGER--  590 (635)
T ss_dssp             ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH------------HHHHHTTCC--
T ss_pred             ccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH------------HHHHHcCCC--
Confidence            1  2223456788999999999999999999999999999998 9999976532211            111111110  


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                             ...+......+.+++..||+.||++|||+++|++.|+..
T Consensus       591 -------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  629 (635)
T 4fl3_A          591 -------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  629 (635)
T ss_dssp             -------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             -------CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence                   011112346788999999999999999999999999864

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=6.7e-38  Score=332.26  Aligned_cols=264  Identities=19%  Similarity=0.290  Sum_probs=205.8

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEE-ecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFC-SEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-~~~~~~~lV~e  567 (788)
                      .|.+.+.||+|+||.||+|...  .++..||||.+....  ..+.+.+|++++++++|++++..+.++ .+.+..++|||
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A           10 RYRLGRKIGSGSFGDIYLGTDI--AAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET--TTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             EEEEEEEEccCCCeEEEEEEEc--CCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            4667799999999999999876  677899999886543  234688999999999988876666555 66778899999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+ +++|.+++......+++..++.++.||+.||.|||++   +|+||||||+|||++...  .++.+||+|||++....
T Consensus        86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~--~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A           86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGK--KGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGG--GTTCEEECCCTTCEECB
T ss_pred             ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCC--CCCeEEEeeCCCccccc
Confidence            99 9999999986677899999999999999999999999   999999999999994222  66789999999998765


Q ss_pred             CCCCc------ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          648 KDQTR------TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       648 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      .....      ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.............    . .....
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~----~-~~~~~  234 (296)
T 3uzp_A          160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYE----R-ISEKK  234 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHH----H-HHHHH
T ss_pred             ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhh----h-hcccc
Confidence            43321      1234678999999999999999999999999999999999999998643322111110    0 00100


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      .......+.         ....+.+.+++.+||+.||++|||+++|++.|+.+..
T Consensus       235 ~~~~~~~~~---------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  280 (296)
T 3uzp_A          235 MSTPIEVLC---------KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  280 (296)
T ss_dssp             HHSCHHHHT---------TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred             cCCchHHHH---------hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHH
Confidence            000000000         1123568889999999999999999999999987654

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.1e-37  Score=344.87  Aligned_cols=277  Identities=21%  Similarity=0.262  Sum_probs=210.4

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCC--eEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED--KRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lV  565 (788)
                      .|.+.++||+|+||+||+|.+.  .++..||||.+.... ....+.+.+|++++++++||||+++++++.+.+  ..++|
T Consensus        10 ~y~i~~~LG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A           10 LWLLSDILGQGATANVFRGRHK--KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             EEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             ceEEEEEEEcCCCeEEEEEEEC--CCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            4667899999999999999886  667799999987543 334567889999999999999999999998755  78999


Q ss_pred             EecCCCCCHhHhhhccC--CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          566 YELMPNGTLSNFLFHEG--QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      |||+++++|.+++....  ..+++..++.++.||+.||.|||++   +|+||||||+|||+.... ..++.+||+|||++
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~-~~~~~~kL~DFG~a  163 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGE-DGQSVYKLTDFGAA  163 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECT-TSCEEEEECCGGGC
T ss_pred             EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecC-CCceeEEEecCCCc
Confidence            99999999999997543  2389999999999999999999999   999999999999982111 16678999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccC--------CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHH
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRN--------VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSD  715 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~  715 (788)
                      .......  ......||+.|+|||++.+        ..++.++||||||+++|||++|+.||...........   .+..
T Consensus       164 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~---~~~~  238 (396)
T 4eut_A          164 RELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKE---VMYK  238 (396)
T ss_dssp             EECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHH---HHHH
T ss_pred             eEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHH---HHHH
Confidence            8764432  2234578999999999865        5778899999999999999999999975432211110   0100


Q ss_pred             HHHHHhhcccccccc-----------cCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCC
Q 047157          716 WVISCMLSRNLQVLV-----------SHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEV  777 (788)
Q Consensus       716 ~~~~~~~~~~~~~l~-----------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~  777 (788)
                       ..............           ...............+.+++.+||+.||++||++.|+++.++.+++.
T Consensus       239 -~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          239 -IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             -HHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             -HhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence             00000000000000           00111122356677888999999999999999999999999887654

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=4.1e-38  Score=333.00  Aligned_cols=260  Identities=24%  Similarity=0.341  Sum_probs=199.4

Q ss_pred             HhhcccccccccccceEEEEEEecc-Ccceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      ..|.+.+.||+|+||+||+|.+... +....||||.+....   ....+.+.+|++++++++||||+++++++.+.. .+
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~   96 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK   96 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence            4577789999999999999987532 344579999986542   345678999999999999999999999998765 88


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +|+||+++++|.+++......+++..+..++.||+.||.|||++   +|+|+||||+||+++     .++.+||+|||++
T Consensus        97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~-----~~~~~kl~Dfg~~  168 (291)
T 1u46_A           97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLA-----TRDLVKIGDFGLM  168 (291)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEE-----ETTEEEECCCTTC
T ss_pred             eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEc-----CCCCEEEcccccc
Confidence            99999999999999987667789999999999999999999999   999999999999998     7789999999999


Q ss_pred             cccCCCCCc--ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHH
Q 047157          644 KLLNKDQTR--TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       644 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      .........  ......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+.           . ..
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-----------~-~~  236 (291)
T 1u46_A          169 RALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI-----------L-HK  236 (291)
T ss_dssp             EECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-----------H-HH
T ss_pred             ccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHH-----------H-HH
Confidence            876543322  1223457788999999998889999999999999999999 9999975432111           0 01


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      .....        ..........+.+.+++.+||+.||++|||+.++++.|+++..
T Consensus       237 ~~~~~--------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          237 IDKEG--------ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             HHTSC--------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             HHccC--------CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence            11110        0011112234678899999999999999999999999987654

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=8.2e-38  Score=336.68  Aligned_cols=252  Identities=23%  Similarity=0.244  Sum_probs=193.7

Q ss_pred             HHhhcccccccccccceEEEEEEec-cCcceeeeeeecccch----HHHHHHHHHHHHHhcCCCccccceEeeEEecCCe
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRL-KDTQIEIAVKKLEKDI----EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDK  561 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  561 (788)
                      ...|.+.+.||+|+||.||++.... ..++..||+|.+.+..    ......+.+|++++++++||||+++++++.+.+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            3457788999999999999998742 2467799999987542    2334568899999999999999999999999999


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      .++||||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~-----~~~~~kl~Dfg  166 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLERE-GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLN-----HQGHVKLTDFG  166 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEEC-----TTSCEEECCCS
T ss_pred             EEEEEeCCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEEC-----CCCcEEEEeCC
Confidence            99999999999999999654 4678899999999999999999999   999999999999998     78899999999


Q ss_pred             CccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      ++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+.            ....
T Consensus       167 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~------------~~~i  233 (327)
T 3a62_A          167 LCKESIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT------------IDKI  233 (327)
T ss_dssp             CC-----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH------------HHHH
T ss_pred             cccccccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH------------HHHH
Confidence            9976433222 22345789999999999999999999999999999999999999976432111            0111


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIHM  770 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~  770 (788)
                      .....        ..  +......+.+++.+||+.||++||     +++|++++
T Consensus       234 ~~~~~--------~~--p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h  277 (327)
T 3a62_A          234 LKCKL--------NL--PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH  277 (327)
T ss_dssp             HHTCC--------CC--CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred             HhCCC--------CC--CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence            11110        00  011245678899999999999999     78888763

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=2.3e-37  Score=324.67  Aligned_cols=253  Identities=25%  Similarity=0.319  Sum_probs=203.1

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ..|.+.+.||+|+||.||+|...  .++..||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   84 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNR--VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   84 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEET--TTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEEeecCCCcEEEEEEEC--CCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence            45778899999999999999886  567799999986433 344578899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+|+||||+||+++     .++.+||+|||.+...
T Consensus        85 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~-----~~~~~kl~dfg~~~~~  155 (276)
T 2yex_A           85 EYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLD-----ERDNLKISDFGLATVF  155 (276)
T ss_dssp             ECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----TTCCEEECCCTTCEEC
T ss_pred             EecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEc-----cCCCEEEeeCCCcccc
Confidence            999999999998543 5689999999999999999999999   999999999999998     7789999999999865


Q ss_pred             CCCCC-cccccccCCccccCcccccCCCC-CccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          647 NKDQT-RTDTNMRGTMGYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       647 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~-s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ..... .......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||........      ....+     ...
T Consensus       156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~~-----~~~  224 (276)
T 2yex_A          156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ------EYSDW-----KEK  224 (276)
T ss_dssp             EETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH------HHHHH-----HTT
T ss_pred             CCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH------HHHHh-----hhc
Confidence            43221 12234578999999999987765 7899999999999999999999976432111      11111     000


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .        ............+.+++.+||+.||++|||++|++++
T Consensus       225 ~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (276)
T 2yex_A          225 K--------TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (276)
T ss_dssp             C--------TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             c--------cccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence            0        0000111234567889999999999999999999863

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=3e-37  Score=327.13  Aligned_cols=248  Identities=23%  Similarity=0.322  Sum_probs=203.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||.||++...  .++..+|+|.+....   ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        16 ~y~~~~~lg~G~~g~Vy~~~~~--~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           16 RYVRGRFLGKGGFAKCFEISDA--DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             EEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ceEEEEEEeecCCEEEEEEEEC--CCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            4667799999999999999886  667789999886542   34567889999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++..
T Consensus        94 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~-----~~~~~kl~dfg~~~~  164 (294)
T 2rku_A           94 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLN-----EDLEVKIGDFGLATK  164 (294)
T ss_dssp             EECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC-----TTCCEEECCCTTCEE
T ss_pred             EecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEc-----CCCCEEEEeccCcee
Confidence            9999999999988654 5689999999999999999999999   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ....... .....|++.|+|||.+.+..++.++||||||+++|||++|+.||......+.            ........
T Consensus       165 ~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------------~~~~~~~~  231 (294)
T 2rku_A          165 VEYDGER-KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------------YLRIKKNE  231 (294)
T ss_dssp             CCSTTCC-BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------------HHHHHTTC
T ss_pred             cccCccc-cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------------HHHHhhcc
Confidence            6533222 2335689999999999998999999999999999999999999976432111            00111111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .        .  ........+.+++.+||+.||++|||++|+++.
T Consensus       232 ~--------~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          232 Y--------S--IPKHINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             C--------C--CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             C--------C--CccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            0        0  011123567889999999999999999999974

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=2.7e-38  Score=340.55  Aligned_cols=265  Identities=26%  Similarity=0.383  Sum_probs=204.7

Q ss_pred             HHHHhhcccccccccccceEEEEEEe---ccCcceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecCC
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILR---LKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED  560 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~---~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  560 (788)
                      +....|.+.+.||+|+||.||+|...   ....+..||||.+... ......++.+|+.++++++||||+++++++.+..
T Consensus        27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  106 (327)
T 2yfx_A           27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL  106 (327)
T ss_dssp             CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence            34556788899999999999999853   1245668999998643 3445668899999999999999999999999999


Q ss_pred             eEEEEEecCCCCCHhHhhhccC------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCc
Q 047157          561 KRLLVYELMPNGTLSNFLFHEG------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM  634 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~  634 (788)
                      ..++||||+++++|.+++....      ..+++..++.++.||+.||.|||++   +|+||||||+|||++..+  ....
T Consensus       107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~--~~~~  181 (327)
T 2yfx_A          107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG--PGRV  181 (327)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSS--TTCC
T ss_pred             CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCC--Ccce
Confidence            9999999999999999997653      3478999999999999999999999   999999999999998443  4557


Q ss_pred             EEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhh
Q 047157          635 AKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIV  712 (788)
Q Consensus       635 ~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~  712 (788)
                      +||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+        
T Consensus       182 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--------  253 (327)
T 2yfx_A          182 AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--------  253 (327)
T ss_dssp             EEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--------
T ss_pred             EEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH--------
Confidence            99999999975533221 22233567889999999998899999999999999999998 999997542211        


Q ss_pred             hHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          713 LSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       713 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      .    ...........         ........+.+++.+||+.||++|||+.||+++|+.+.
T Consensus       254 ~----~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~  303 (327)
T 2yfx_A          254 V----LEFVTSGGRMD---------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  303 (327)
T ss_dssp             H----HHHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             H----HHHHhcCCCCC---------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence            0    11111111000         01122456788999999999999999999999998654

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=5.2e-38  Score=339.89  Aligned_cols=256  Identities=22%  Similarity=0.283  Sum_probs=200.4

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ...|.+.+.||+|+||.||++..+  .++..||||.+.+...    ...+|++++.++ +||||+++++++.+.+..++|
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~--~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv   94 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHK--ATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV   94 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEEEEEeeCCCEEEEEEEEC--CCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence            346778899999999999999886  6778999999976432    234688888877 799999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++|+|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||+.... .....+||+|||++..
T Consensus        95 ~E~~~gg~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~-~~~~~~kl~Dfg~a~~  169 (342)
T 2qr7_A           95 TELMKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDES-GNPESIRICDFGFAKQ  169 (342)
T ss_dssp             ECCCCSCBHHHHHHTC-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSS-CSGGGEEECCCTTCEE
T ss_pred             EeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCC-CCcCeEEEEECCCccc
Confidence            9999999999999654 5689999999999999999999999   999999999999985321 1234699999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||........         ......+..+.
T Consensus       170 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~---------~~~~~~i~~~~  239 (342)
T 2qr7_A          170 LRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP---------EEILARIGSGK  239 (342)
T ss_dssp             CBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCH---------HHHHHHHHHCC
T ss_pred             CcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCH---------HHHHHHHccCC
Confidence            654332 22345789999999999888899999999999999999999999975321110         00111111121


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ...      .........+.+.+++.+||+.||++|||+.|+++
T Consensus       240 ~~~------~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          240 FSL------SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             CCC------CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ccc------CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            110      00001123456788999999999999999999986

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.1e-37  Score=341.82  Aligned_cols=204  Identities=27%  Similarity=0.407  Sum_probs=164.0

Q ss_pred             HHHhhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCC-ccccceEeeEEecCC--
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEED--  560 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~--  560 (788)
                      ....|.+.+.||+|+||.||+|.+.  .++..||||++...  .....+.+.+|+.++.++. ||||+++++++...+  
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~   84 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDR--RTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR   84 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEET--TTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEEC--CCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence            3456778899999999999999886  66779999988543  2445567889999999997 999999999997544  


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ..++||||++ ++|.+++..  ..+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+||
T Consensus        85 ~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~-----~~~~~kl~DF  153 (388)
T 3oz6_A           85 DVYLVFDYME-TDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLN-----AECHVKVADF  153 (388)
T ss_dssp             CEEEEEECCS-EEHHHHHHH--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC-----TTCCEEECCC
T ss_pred             EEEEEecccC-cCHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEc-----CCCCEEecCC
Confidence            7899999997 689998865  4688999999999999999999999   999999999999998     7889999999


Q ss_pred             CCccccCCCC--------------------CcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCc
Q 047157          641 GISKLLNKDQ--------------------TRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIEL  699 (788)
Q Consensus       641 g~a~~~~~~~--------------------~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~  699 (788)
                      |+++......                    ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus       154 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  233 (388)
T 3oz6_A          154 GLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG  233 (388)
T ss_dssp             TTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence            9998653211                    112234579999999999876 6789999999999999999999999986


Q ss_pred             ccc
Q 047157          700 SRV  702 (788)
Q Consensus       700 ~~~  702 (788)
                      .+.
T Consensus       234 ~~~  236 (388)
T 3oz6_A          234 SST  236 (388)
T ss_dssp             SSH
T ss_pred             CCH
Confidence            543

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=6.3e-38  Score=338.73  Aligned_cols=254  Identities=21%  Similarity=0.292  Sum_probs=188.1

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC-ccccceEeeEEe--------c
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVRLLGFCS--------E  558 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~--------~  558 (788)
                      ..|.+.++||+|+||.||+|.+.  .++..||||++........+.+.+|+.++.++. ||||+++++++.        .
T Consensus        28 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~  105 (337)
T 3ll6_A           28 LRLRVRRVLAEGGFAFVYEAQDV--GSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG  105 (337)
T ss_dssp             EEEEEEEEEECCSSEEEEEEEET--TTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred             ceEEEEEEEccCCceEEEEEEEC--CCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence            35677899999999999999886  567799999987766667788999999999996 999999999983        3


Q ss_pred             CCeEEEEEecCCCCCHhHhhhc--cCCCCCHHHHHHHHHHHHHHHHHhhhccCCc--eEecCCCCCcEEeccCCCCCCCc
Q 047157          559 EDKRLLVYELMPNGTLSNFLFH--EGQRPGWVQRVEIALGVARGLLYLHEECETQ--IIHCDIKPQNVLLDLKTLDTNYM  634 (788)
Q Consensus       559 ~~~~~lV~e~~~~gsL~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivH~dlkp~NIll~~~~~~~~~~  634 (788)
                      ....++||||+. |+|.+++..  ....+++..++.++.||+.||.|||++   +  |+||||||+|||++     .++.
T Consensus       106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~-----~~~~  176 (337)
T 3ll6_A          106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLS-----NQGT  176 (337)
T ss_dssp             SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEEC-----TTSC
T ss_pred             CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEEC-----CCCC
Confidence            446899999995 799998864  345689999999999999999999998   7  99999999999998     7789


Q ss_pred             EEEeecCCccccCCCCCcc-----------cccccCCccccCcccc---cCCCCCccCcchhhHHHHHHHHhCCCCCCcc
Q 047157          635 AKISDFGISKLLNKDQTRT-----------DTNMRGTMGYVAPEWL---RNVPVTTKVDVFSFGVMLLEIICGRRHIELS  700 (788)
Q Consensus       635 ~kL~Dfg~a~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~s~k~DVwSlGvil~elltg~~p~~~~  700 (788)
                      +||+|||++..........           .....+|+.|+|||++   .+..++.++||||||+++|||++|+.||...
T Consensus       177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~  256 (337)
T 3ll6_A          177 IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG  256 (337)
T ss_dssp             EEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             EEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcch
Confidence            9999999998765432211           1134589999999998   5677899999999999999999999999653


Q ss_pred             ccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          701 RVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       701 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ......                .....        ..........+.+++.+||+.||++|||++|+++.|+.+..
T Consensus       257 ~~~~~~----------------~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~  308 (337)
T 3ll6_A          257 AKLRIV----------------NGKYS--------IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA  308 (337)
T ss_dssp             -------------------------CC--------CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hHHHhh----------------cCccc--------CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            221100                00000        00001112346779999999999999999999999987754

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=1.3e-37  Score=354.67  Aligned_cols=253  Identities=28%  Similarity=0.322  Sum_probs=205.0

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ..+.+.++||+|+||.||+|...  .++..||+|.+.+..   ......+.+|++++++++||||+++++++.+.+..++
T Consensus       184 ~~f~~~~~LG~G~fG~Vy~a~~~--~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          184 NTFRQYRVLGKGGFGEVCACQVR--ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cceEEEEEEeeCCCEEEEEEEEC--CCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence            34666789999999999999886  677899999996542   2334678899999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          565 VYELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      ||||+++|+|.+++...+ ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++
T Consensus       262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld-----~~g~vKL~DFGla  333 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLD-----DHGHIRISDLGLA  333 (576)
T ss_dssp             EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC-----TTSCEEECCCTTC
T ss_pred             EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEe-----CCCCeEEEecccc
Confidence            999999999999997653 3589999999999999999999999   999999999999998     7889999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ........  .....||+.|+|||++.+..++.++|||||||++|||++|+.||..........    .+    ......
T Consensus       334 ~~~~~~~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~----~i----~~~i~~  403 (576)
T 2acx_A          334 VHVPEGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE----EV----ERLVKE  403 (576)
T ss_dssp             EECCTTCC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHH----HH----HHHHHH
T ss_pred             eecccCcc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHH----HH----HHHhhc
Confidence            87654322  234579999999999999999999999999999999999999997643211110    01    111111


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIHM  770 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~  770 (788)
                      ..        ...  .......+.+++.+||+.||++||     +++||+++
T Consensus       404 ~~--------~~~--p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          404 VP--------EEY--SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             CC--------CCC--CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             cc--------ccC--CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence            10        000  112245778899999999999999     78999863

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=4.9e-37  Score=332.75  Aligned_cols=273  Identities=21%  Similarity=0.291  Sum_probs=210.3

Q ss_pred             CcccCHHHHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcC--CCccccceEee
Q 047157          477 FREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR--THHKNLVRLLG  554 (788)
Q Consensus       477 ~~~~~~~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~hpniv~~~~  554 (788)
                      ...+...+.....|.+.+.||+|+||.||+|..    .+..||||.+...   ..+.+.+|.+++..  ++||||+++++
T Consensus        31 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~  103 (342)
T 1b6c_B           31 GLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW----RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIA  103 (342)
T ss_dssp             SSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE----TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEE
T ss_pred             CCceeecccccccEEEEeeecCCCCcEEEEEEE----cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEe
Confidence            344555667778899999999999999999986    3668999998654   24567788888876  79999999999


Q ss_pred             EEecCC----eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhh--------hccCCceEecCCCCCcE
Q 047157          555 FCSEED----KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH--------EECETQIIHCDIKPQNV  622 (788)
Q Consensus       555 ~~~~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH--------~~~~~~ivH~dlkp~NI  622 (788)
                      ++....    ..++||||+++++|.+++.+  ..+++..++.++.||+.||.|||        +.   +|+||||||+||
T Consensus       104 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NI  178 (342)
T 1b6c_B          104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNI  178 (342)
T ss_dssp             EEECCCSSCCCEEEEECCCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGE
T ss_pred             eecccCCccceeEEEEeecCCCcHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHE
Confidence            998876    78999999999999999965  36899999999999999999999        66   999999999999


Q ss_pred             EeccCCCCCCCcEEEeecCCccccCCCCCc---ccccccCCccccCcccccCC------CCCccCcchhhHHHHHHHHhC
Q 047157          623 LLDLKTLDTNYMAKISDFGISKLLNKDQTR---TDTNMRGTMGYVAPEWLRNV------PVTTKVDVFSFGVMLLEIICG  693 (788)
Q Consensus       623 ll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~s~k~DVwSlGvil~elltg  693 (788)
                      |++     .++.+||+|||++.........   ......||+.|+|||++.+.      .++.++||||||+++|||++|
T Consensus       179 ll~-----~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg  253 (342)
T 1b6c_B          179 LVK-----KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR  253 (342)
T ss_dssp             EEC-----TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEC-----CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhc
Confidence            998     7789999999999876543322   22345789999999998765      344789999999999999999


Q ss_pred             ----------CCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC
Q 047157          694 ----------RRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS  763 (788)
Q Consensus       694 ----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt  763 (788)
                                +.||.........      ... .............   .+......+..+.+.+++.+||+.||++|||
T Consensus       254 ~~~~~~~~~~~~p~~~~~~~~~~------~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps  323 (342)
T 1b6c_B          254 CSIGGIHEDYQLPYYDLVPSDPS------VEE-MRKVVCEQKLRPN---IPNRWQSCEALRVMAKIMRECWYANGAARLT  323 (342)
T ss_dssp             BCBTTBCCCCCCTTTTTSCSSCC------HHH-HHHHHTTSCCCCC---CCGGGGTSHHHHHHHHHHHHHCCSSGGGSCC
T ss_pred             cCcCCcccccccCccccCcCccc------HHH-HHHHHHHHHhCCC---CcccccchhHHHHHHHHHHHHhccChhhCCC
Confidence                      6677543221110      011 1111111111100   1111123466778999999999999999999


Q ss_pred             HHHHHHHhhcCcC
Q 047157          764 MKKVIHMLEGTLE  776 (788)
Q Consensus       764 ~~evl~~L~~~~~  776 (788)
                      ++||+++|+.+.+
T Consensus       324 ~~~i~~~L~~i~~  336 (342)
T 1b6c_B          324 ALRIKKTLSQLSQ  336 (342)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999987654

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.3e-37  Score=350.47  Aligned_cols=266  Identities=21%  Similarity=0.246  Sum_probs=194.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecC------C
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE------D  560 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------~  560 (788)
                      .|.+.+.||+|+||+||+|...  .++..||||++...  .....+++.+|+.+++.++||||+++++++...      .
T Consensus        63 ~y~~~~~lG~G~~g~V~~a~~~--~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           63 RYQNLKPIGSGAQGIVCAAYDA--VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             TEEEEEEEEECSSCEEEEEEET--TTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             CeEEEEEeecCCCeEEEEEEEC--CCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            3667789999999999999886  66789999999754  344567889999999999999999999999654      4


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ..++||||+++ +|.+.+.   ..+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+||
T Consensus       141 ~~~lv~E~~~~-~l~~~~~---~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~-----~~~~~kl~DF  208 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVK-----SDCTLKILDF  208 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC-----TTSCEEECCC
T ss_pred             eEEEEEeCCCC-CHHHHHh---hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEe-----CCCCEEEEEE
Confidence            67999999976 4666653   3488999999999999999999999   999999999999998     7889999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh----H--
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL----S--  714 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~----~--  714 (788)
                      |+++......  ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+........+    .  
T Consensus       209 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~  286 (464)
T 3ttj_A          209 GLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF  286 (464)
T ss_dssp             CCC-----CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred             EeeeecCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence            9998764432  2334678999999999999999999999999999999999999998754322211100000    0  


Q ss_pred             -----HHHHHHhhcc-c-----ccccccC---CCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          715 -----DWVISCMLSR-N-----LQVLVSH---DPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       715 -----~~~~~~~~~~-~-----~~~l~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                           .......... .     +...+..   .............+.+|+.+||+.||++|||++|++++
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          287 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             HTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                 0000000000 0     0000000   00000111235678999999999999999999999974

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=1.8e-37  Score=326.74  Aligned_cols=253  Identities=21%  Similarity=0.319  Sum_probs=205.5

Q ss_pred             HHHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEec----
Q 047157          483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE----  558 (788)
Q Consensus       483 ~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----  558 (788)
                      .......|.+.+.||+|+||.||+|...  .++..||+|.+....    +.+.+|++++++++||||+++++++..    
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   79 (284)
T 2a19_B            6 DKRFGMDFKEIELIGSGGFGQVFKAKHR--IDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYD   79 (284)
T ss_dssp             CHHHHHHEEEEEEEECSSSCCEEEEEET--TTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC
T ss_pred             cchhccccceeeeeccCCceEEEEEEEc--CCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccC
Confidence            3455667888899999999999999886  567799999987543    346689999999999999999998854    


Q ss_pred             ------------CCeEEEEEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEec
Q 047157          559 ------------EDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLD  625 (788)
Q Consensus       559 ------------~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  625 (788)
                                  ....++||||+++++|.+++... ...+++..++.++.||+.||.|||++   +|+|+||||+||+++
T Consensus        80 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~  156 (284)
T 2a19_B           80 PETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLV  156 (284)
T ss_dssp             ---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred             cccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEc
Confidence                        44589999999999999999654 45789999999999999999999999   999999999999998


Q ss_pred             cCCCCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccc
Q 047157          626 LKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEE  705 (788)
Q Consensus       626 ~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~  705 (788)
                           .++.+||+|||++........  .....+++.|+|||.+.+..++.++||||||+++|||++|..|+....    
T Consensus       157 -----~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----  225 (284)
T 2a19_B          157 -----DTKQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS----  225 (284)
T ss_dssp             -----ETTEEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH----
T ss_pred             -----CCCCEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH----
Confidence                 778999999999987654332  233568999999999999999999999999999999999998874211    


Q ss_pred             cccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCC
Q 047157          706 SEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEV  777 (788)
Q Consensus       706 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~  777 (788)
                               . .........+..            .....+.+++.+||+.||++|||+.|++++|+.+...
T Consensus       226 ---------~-~~~~~~~~~~~~------------~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~  275 (284)
T 2a19_B          226 ---------K-FFTDLRDGIISD------------IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS  275 (284)
T ss_dssp             ---------H-HHHHHHTTCCCT------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred             ---------H-HHHHhhcccccc------------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence                     0 011111111111            1234577899999999999999999999999876543

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=5e-38  Score=343.22  Aligned_cols=270  Identities=21%  Similarity=0.329  Sum_probs=203.2

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ...|.+.+.||+|+||+||++...  .++..||+|.+... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  109 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHK--PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC  109 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cccceeeeeecCCCCeEEEEEEEC--CCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence            345677789999999999999886  66779999998754 344567899999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++... ..+++..+..++.||+.||.|||++  .+|+||||||+|||++     .++.+||+|||++..
T Consensus       110 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~-----~~~~~kl~Dfg~~~~  181 (360)
T 3eqc_A          110 MEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVN-----SRGEIKLCDFGVSGQ  181 (360)
T ss_dssp             ECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEEC-----TTCCEEECCCCCCHH
T ss_pred             EECCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEEC-----CCCCEEEEECCCCcc
Confidence            9999999999999655 4688999999999999999999983  1799999999999998     778999999999875


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh------------
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL------------  713 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~------------  713 (788)
                      ....   ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+.........            
T Consensus       182 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (360)
T 3eqc_A          182 LIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPR  258 (360)
T ss_dssp             HHHH---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------
T ss_pred             cccc---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcc
Confidence            4321   1223578999999999999999999999999999999999999997653322110000000            


Q ss_pred             ------HHHHHHHhhc----ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          714 ------SDWVISCMLS----RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       714 ------~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                            ..+.......    ..+...................+.+++.+||+.||++|||++|+++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          259 TPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             ---------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             cCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence                  0000000000    0000000011111111123456889999999999999999999986

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.8e-37  Score=330.50  Aligned_cols=260  Identities=25%  Similarity=0.312  Sum_probs=204.8

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ...|.+.+.||+|+||.||++...  .++..||+|.+........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQR--LTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM   85 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccceeeeeccCCCCceEEEEEEC--CCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence            456788899999999999999886  567799999997665555667899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+||++....  .++.+||+|||++...
T Consensus        86 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~--~~~~~kl~Dfg~~~~~  159 (304)
T 2jam_A           86 QLVSGGELFDRILER-GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPE--ENSKIMITDFGLSKME  159 (304)
T ss_dssp             CCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSS--TTCCEEBCSCSTTCCC
T ss_pred             EcCCCccHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCC--CCCCEEEccCCcceec
Confidence            999999999998654 4688999999999999999999999   999999999999994222  6789999999999764


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      ...   ......|++.|+|||.+.+..++.++||||||+++|||++|+.||........            .........
T Consensus       160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------------~~~i~~~~~  224 (304)
T 2jam_A          160 QNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKL------------FEKIKEGYY  224 (304)
T ss_dssp             CCB---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------------HHHHHHCCC
T ss_pred             CCC---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH------------HHHHHcCCC
Confidence            332   12234689999999999999999999999999999999999999975422110            111111111


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH--HhhcCc
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH--MLEGTL  775 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~--~L~~~~  775 (788)
                      . .     ...........+.+++.+||+.||++|||++|+++  .+++..
T Consensus       225 ~-~-----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (304)
T 2jam_A          225 E-F-----ESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNT  269 (304)
T ss_dssp             C-C-----CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSC
T ss_pred             C-C-----CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCCC
Confidence            0 0     00001123456888999999999999999999996  455443

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=2.8e-37  Score=333.80  Aligned_cols=247  Identities=23%  Similarity=0.334  Sum_probs=203.4

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||.||++...  .++..+|+|.+....   ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        42 ~y~~~~~lg~G~~g~Vy~~~~~--~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           42 RYVRGRFLGKGGFAKCFEISDA--DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             EEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ceEEEEEEeeCCCeEEEEEEEC--CCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            4667799999999999999886  667789999986542   34567889999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++... ..+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++..
T Consensus       120 ~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-----~~~~~kl~Dfg~~~~  190 (335)
T 2owb_A          120 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLN-----EDLEVKIGDFGLATK  190 (335)
T ss_dssp             ECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC-----TTCCEEECCCTTCEE
T ss_pred             EecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEc-----CCCCEEEeeccCcee
Confidence            9999999999988654 5689999999999999999999999   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ....... .....|++.|+|||++.+..++.++||||||+++|||++|+.||......+.            ........
T Consensus       191 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------------~~~~~~~~  257 (335)
T 2owb_A          191 VEYDGER-KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------------YLRIKKNE  257 (335)
T ss_dssp             CCSTTCC-BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------------HHHHHHTC
T ss_pred             cccCccc-ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH------------HHHHhcCC
Confidence            6533222 2335689999999999999999999999999999999999999975432111            00011111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ..        .  .......+.+++.+||+.||++|||++|+++
T Consensus       258 ~~--------~--~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          258 YS--------I--PKHINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             CC--------C--CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             CC--------C--CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            00        0  0112346778999999999999999999997

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=1.6e-37  Score=335.69  Aligned_cols=274  Identities=24%  Similarity=0.316  Sum_probs=196.3

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEec-----CCeE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE-----EDKR  562 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~~  562 (788)
                      ..|.+.+.||+|+||.||+|..    .+..||||++...... ......|+..+..++||||+++++.+..     ....
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~~-~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           13 DNLKLLELIGRGRYGAVYKGSL----DERPVAVKVFSFANRQ-NFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEE----TTEEEEEEEEEGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             HHhheeeecccCCCeEEEEEEE----CCeEEEEEEeeccchh-hHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            3466779999999999999965    4579999998754322 1222344445566899999999985532     3367


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcc------CCceEecCCCCCcEEeccCCCCCCCcEE
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC------ETQIIHCDIKPQNVLLDLKTLDTNYMAK  636 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~------~~~ivH~dlkp~NIll~~~~~~~~~~~k  636 (788)
                      ++||||+++|+|.+++...  ..++..++.++.||+.||.|||+.+      .++|+||||||+|||++     .++.+|
T Consensus        88 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~-----~~~~~k  160 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLH--TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVK-----NDGTCV  160 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEEC-----TTSCEE
T ss_pred             EEEEecCCCCcHHHHHhhc--ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEc-----CCCcEE
Confidence            8999999999999999654  3488999999999999999999863      33899999999999998     778999


Q ss_pred             EeecCCccccCCCCC-------cccccccCCccccCcccccC-------CCCCccCcchhhHHHHHHHHhCCCCCCcccc
Q 047157          637 ISDFGISKLLNKDQT-------RTDTNMRGTMGYVAPEWLRN-------VPVTTKVDVFSFGVMLLEIICGRRHIELSRV  702 (788)
Q Consensus       637 L~Dfg~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~s~k~DVwSlGvil~elltg~~p~~~~~~  702 (788)
                      |+|||++..+.....       .......||+.|+|||++.+       ..++.++||||||+++|||++|..||.....
T Consensus       161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~  240 (336)
T 3g2f_A          161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES  240 (336)
T ss_dssp             ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred             EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence            999999987643221       12224569999999999976       4677899999999999999999877654322


Q ss_pred             ccccccch-------hhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          703 EEESEEVD-------IVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       703 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ........       ...... ............+  .............+.+++.+||+.||++|||++||++.|++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll  317 (336)
T 3g2f_A          241 VPEYQMAFQTEVGNHPTFEDM-QVLVSREKQRPKF--PEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM  317 (336)
T ss_dssp             CCCCCCTTHHHHCSSCCHHHH-HHHHTTSCCCCCC--CTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhHHHHhhhcccCCCchHHHH-HhhhcccccCCCC--CcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence            21111000       000010 0111111111110  1111223345678999999999999999999999999998876


Q ss_pred             C
Q 047157          776 E  776 (788)
Q Consensus       776 ~  776 (788)
                      .
T Consensus       318 ~  318 (336)
T 3g2f_A          318 M  318 (336)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=4.3e-37  Score=325.23  Aligned_cols=248  Identities=24%  Similarity=0.335  Sum_probs=196.8

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEec----CCeEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSE----EDKRL  563 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----~~~~~  563 (788)
                      +.+.+.||+|+||+||+|...  .++..||+|.+....  ....+.+.+|+.++++++||||+++++++..    ....+
T Consensus        28 ~~~~~~lg~G~~g~Vy~~~~~--~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           28 LKFDIEIGRGSFKTVYKGLDT--ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             EEeeeeccCCCCeEEEEeEec--CCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence            456788999999999999886  677789999886432  4456789999999999999999999998865    45689


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCc--eEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ--IIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      +||||+++++|.+++... ..+++..++.++.||+.||.|||++   +  |+||||||+|||++.    .++.+||+|||
T Consensus       106 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~----~~~~~kl~Dfg  177 (290)
T 1t4h_A          106 LVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITG----PTGSVKIGDLG  177 (290)
T ss_dssp             EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESS----TTSCEEECCTT
T ss_pred             EEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEEC----CCCCEEEeeCC
Confidence            999999999999999654 5688999999999999999999998   7  999999999999962    56789999999


Q ss_pred             CccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      ++.......   .....|++.|+|||.+.+ .++.++||||||+++|+|++|+.||........           .....
T Consensus       178 ~~~~~~~~~---~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-----------~~~~~  242 (290)
T 1t4h_A          178 LATLKRASF---AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-----------IYRRV  242 (290)
T ss_dssp             GGGGCCTTS---BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-----------HHHHH
T ss_pred             Ccccccccc---cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH-----------HHHHH
Confidence            997654332   223568999999998874 589999999999999999999999965322110           01111


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ........        ........+.+++.+||+.||++|||++|++++
T Consensus       243 ~~~~~~~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  283 (290)
T 1t4h_A          243 TSGVKPAS--------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             TTTCCCGG--------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hccCCccc--------cCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            11111100        111123568889999999999999999999863

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=8.3e-38  Score=337.02  Aligned_cols=266  Identities=19%  Similarity=0.235  Sum_probs=193.3

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ..|.+.++||+|+||+||+|...  .++..||||++....  ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        34 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           34 DRYRRITKLGEGTYGEVYKAIDT--VTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET--TTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhEEEEEEEEecCCeEEEEEEEC--CCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            35777899999999999999876  677899999986443  23345788999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||++ ++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++..+....+.+||+|||++..
T Consensus       112 ~e~~~-~~L~~~~~~~-~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~  186 (329)
T 3gbz_A          112 FEYAE-NDLKKYMDKN-PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA  186 (329)
T ss_dssp             EECCS-EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred             EecCC-CCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence            99997 5999998655 4689999999999999999999999   99999999999999643323566799999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ...... ......+|+.|+|||++.+. .++.++||||||+++|||++|+.||......+...       . ........
T Consensus       187 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-------~-~~~~~~~~  257 (329)
T 3gbz_A          187 FGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF-------K-IFEVLGLP  257 (329)
T ss_dssp             HC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-------H-HHHHHCCC
T ss_pred             cCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHH-------H-HHHHhCCC
Confidence            643322 22335679999999999774 58999999999999999999999997653221110       0 00000000


Q ss_pred             ---cc------cccccCCCCCc-ccH------HHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          725 ---NL------QVLVSHDPEVL-SDL------ERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       725 ---~~------~~l~~~~~~~~-~~~------~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                         ..      .......+... ...      ...+.+.+++.+||+.||++|||++|+++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          258 DDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             CTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             chhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence               00      00000000000 000      12367789999999999999999999986

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.8e-37  Score=330.59  Aligned_cols=253  Identities=22%  Similarity=0.326  Sum_probs=200.9

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      .....|.+.+.||+|+||.||+|...  .++..||+|.+....  ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHK--ETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI  101 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEET--TTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEEC--CCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence            34456777899999999999999886  567799999987532  34678899999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++++|.+++......+++..+..++.||+.||.|||+.   +|+|+||||+||+++     .++.+||+|||++.
T Consensus       102 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~-----~~~~~kl~dfg~~~  173 (314)
T 3com_A          102 VMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLN-----TEGHAKLADFGVAG  173 (314)
T ss_dssp             EEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----TTCCEEECCCTTCE
T ss_pred             EeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEEC-----CCCCEEEeecccch
Confidence            9999999999999976677899999999999999999999999   999999999999998     77899999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ....... ......+++.|+|||.+.+..++.++||||||+++|+|++|+.||........           ... ....
T Consensus       174 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----------~~~-~~~~  240 (314)
T 3com_A          174 QLTDTMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA-----------IFM-IPTN  240 (314)
T ss_dssp             ECBTTBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-----------HHH-HHHS
T ss_pred             hhhhhcc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH-----------HHH-HhcC
Confidence            7644322 22335689999999999999999999999999999999999999975422110           000 0000


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .       .+...........+.+++.+||+.||++|||+.++++
T Consensus       241 ~-------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          241 P-------PPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             C-------CCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             C-------CcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            0       0111111223457888999999999999999999986

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=2.1e-37  Score=326.18  Aligned_cols=256  Identities=24%  Similarity=0.309  Sum_probs=201.3

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchH------HHHHHHHHHHHHhcCCCccccceEeeEEecCC
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE------KTNEEFMTELKIIGRTHHKNLVRLLGFCSEED  560 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  560 (788)
                      ...|.+.+.||+|+||.||++...  .++..||+|.+.....      ...+.+.+|++++++++||||+++++++.+.+
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   81 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQK--GTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT   81 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhhhhhHHhhcccCceEEEEEEEc--CCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC
Confidence            456888899999999999999886  5677999998865321      13578899999999999999999999999999


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ..++||||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+||+++.... ....+||+||
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~-~~~~~kl~df  156 (283)
T 3bhy_A           82 DVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNV-PNPRIKLIDF  156 (283)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSS-SSCCEEECCC
T ss_pred             eEEEEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCC-CCCceEEEec
Confidence            999999999999999999654 5689999999999999999999999   9999999999999983221 2348999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      |++........  .....+++.|+|||.+.+..++.++||||||+++|+|++|+.||......+..            ..
T Consensus       157 g~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------------~~  222 (283)
T 3bhy_A          157 GIAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETL------------TN  222 (283)
T ss_dssp             TTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH------------HH
T ss_pred             ccceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHH------------HH
Confidence            99987644322  23356899999999999999999999999999999999999999764321110            00


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ......      ...........+.+.+++.+||+.||++|||+.|+++
T Consensus       223 ~~~~~~------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          223 ISAVNY------DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             HHTTCC------CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             hHhccc------CCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence            000000      0000000122456888999999999999999999997

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=3e-37  Score=341.37  Aligned_cols=249  Identities=24%  Similarity=0.310  Sum_probs=189.0

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhc-CCCccccceEeeEEec----CCeEEEEEec
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIG-RTHHKNLVRLLGFCSE----EDKRLLVYEL  568 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~-~l~hpniv~~~~~~~~----~~~~~lV~e~  568 (788)
                      ++||+|+||+||++.+.  .++..||||++...     ..+.+|++++. ..+||||+++++++..    ....+|||||
T Consensus        68 ~~LG~G~~g~V~~~~~~--~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~  140 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNK--RTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC  140 (400)
T ss_dssp             EEEEEETTEEEEEEEET--TTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred             ceeeeccCeEEEEEEEC--CCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEe
Confidence            68999999999999886  67789999998643     34567888764 4589999999998865    5678999999


Q ss_pred             CCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          569 MPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       569 ~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      +++|+|.+++.... ..+++..+..++.||+.||.|||++   +|+||||||+|||++...  .++.+||+|||+++...
T Consensus       141 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~--~~~~~kl~DFG~a~~~~  215 (400)
T 1nxk_A          141 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKR--PNAILKLTDFGFAKETT  215 (400)
T ss_dssp             CCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSS--TTCCEEECCCTTCEECC
T ss_pred             CCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCC--CCccEEEEecccccccC
Confidence            99999999997653 4689999999999999999999999   999999999999998432  37899999999998654


Q ss_pred             CCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      ...  ......||+.|+|||++.+..++.++|||||||++|||++|+.||............    ..    ....+...
T Consensus       216 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~----~~----~i~~~~~~  285 (400)
T 1nxk_A          216 SHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM----KT----RIRMGQYE  285 (400)
T ss_dssp             -------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSH----HH----HHHHTCCC
T ss_pred             CCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHH----HH----HHHcCccc
Confidence            322  223457899999999999999999999999999999999999999765332211110    00    01111110


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .   ..+   ......+.+.+|+.+||+.||++|||++|++++
T Consensus       286 ~---~~~---~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          286 F---PNP---EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             C---CTT---TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             C---CCc---ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            0   000   001234568889999999999999999999975

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.1e-37  Score=338.04  Aligned_cols=249  Identities=21%  Similarity=0.340  Sum_probs=191.2

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCc--cccceEeeEEecCCeEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHH--KNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~h--pniv~~~~~~~~~~~~~l  564 (788)
                      .|.+.+.||+|+||.||++..   .++..||||++...  .....+.+.+|++++.+++|  |||+++++++.+++..++
T Consensus        10 ~y~i~~~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l   86 (343)
T 3dbq_A           10 IYSILKQIGSGGSSKVFQVLN---EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM   86 (343)
T ss_dssp             EEEEEEEESCCSSEEEEEEEC---TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEEEEecCCCeEEEEEEe---CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence            466789999999999999976   35668999988643  34455789999999999976  999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||| +.+++|.+++... ..+++.++..++.||+.||.|||++   +|+||||||+|||++      ++.+||+|||++.
T Consensus        87 v~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~------~~~~kl~DFG~a~  155 (343)
T 3dbq_A           87 VME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV------DGMLKLIDFGIAN  155 (343)
T ss_dssp             EEC-CCSEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE------TTEEEECCCSSSC
T ss_pred             EEe-CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE------CCcEEEeeccccc
Confidence            999 5688999999764 5788999999999999999999999   999999999999995      3579999999998


Q ss_pred             ccCCCCCc-ccccccCCccccCcccccC-----------CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh
Q 047157          645 LLNKDQTR-TDTNMRGTMGYVAPEWLRN-----------VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV  712 (788)
Q Consensus       645 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~  712 (788)
                      ........ ......||+.|+|||++.+           ..++.++||||||+++|||++|+.||.......        
T Consensus       156 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--------  227 (343)
T 3dbq_A          156 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--------  227 (343)
T ss_dssp             CC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH--------
T ss_pred             ccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH--------
Confidence            76543322 2234679999999999864           678999999999999999999999996431110        


Q ss_pred             hHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          713 LSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       713 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                        ..... ....        ......+......+.+++.+||+.||++|||+.|++++
T Consensus       228 --~~~~~-~~~~--------~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          228 --SKLHA-IIDP--------NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             --HHHHH-HHCT--------TSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             --HHHHH-HhcC--------CcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence              00000 1111        11111111113467889999999999999999999865

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=4.2e-37  Score=336.58  Aligned_cols=257  Identities=19%  Similarity=0.151  Sum_probs=198.8

Q ss_pred             HhhcccccccccccceEEEEEEe---ccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC---ccccceEeeEEecCCe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILR---LKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH---HKNLVRLLGFCSEEDK  561 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~---~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~  561 (788)
                      ..|.+.++||+|+||+||+|...   ....+..||||.+....   ..++..|++++.+++   |+||+++++++...+.
T Consensus        65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~  141 (365)
T 3e7e_A           65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG  141 (365)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred             EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence            45667789999999999999531   12567799999997653   345666666666665   9999999999999999


Q ss_pred             EEEEEecCCCCCHhHhhhc----cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCC------CCC
Q 047157          562 RLLVYELMPNGTLSNFLFH----EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKT------LDT  631 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~------~~~  631 (788)
                      .++||||+++|+|.+++..    ....+++..++.++.||+.||+|||++   +|+||||||+|||++...      ...
T Consensus       142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~  218 (365)
T 3e7e_A          142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDL  218 (365)
T ss_dssp             EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------
T ss_pred             cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccc
Confidence            9999999999999999964    346789999999999999999999999   999999999999998310      012


Q ss_pred             CCcEEEeecCCccccCCC-CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccch
Q 047157          632 NYMAKISDFGISKLLNKD-QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVD  710 (788)
Q Consensus       632 ~~~~kL~Dfg~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~  710 (788)
                      ++.+||+|||+++.+... .........||+.|+|||++.+..++.++||||||+++|||++|+.||.........    
T Consensus       219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~----  294 (365)
T 3e7e_A          219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK----  294 (365)
T ss_dssp             CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE----
T ss_pred             cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee----
Confidence            789999999999765322 222334567999999999999999999999999999999999999999644221110    


Q ss_pred             hhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCC-CCHHHHHHHhhcCcC
Q 047157          711 IVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLR-PSMKKVIHMLEGTLE  776 (788)
Q Consensus       711 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R-Pt~~evl~~L~~~~~  776 (788)
                                     +...+.    ..   ...+.+.+++..|++.+|.+| |+++++.+.|++.++
T Consensus       295 ---------------~~~~~~----~~---~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~  339 (365)
T 3e7e_A          295 ---------------PEGLFR----RL---PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ  339 (365)
T ss_dssp             ---------------ECSCCT----TC---SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred             ---------------echhcc----cc---CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence                           001110    11   123456678888999999999 688888888876543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=3.8e-37  Score=350.62  Aligned_cols=255  Identities=25%  Similarity=0.343  Sum_probs=200.4

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ...|.+.+.||+|+||+||+|...  .++..||+|.+....  ......+.+|+.++++++||||+++++++.+....++
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  113 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDK--VTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL  113 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEET--TTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEEC--CCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            456888899999999999999886  667799999987543  2335678999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++|+|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++...  .+..+||+|||++.
T Consensus       114 v~e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~--~~~~~kl~DfG~a~  187 (494)
T 3lij_A          114 VMECYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKE--KDALIKIVDFGLSA  187 (494)
T ss_dssp             EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSS--TTCCEEECCCTTCE
T ss_pred             EEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCC--CCCcEEEEECCCCe
Confidence            99999999999988655 5688999999999999999999999   999999999999997433  45679999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .......  .....||+.|+|||++. ..++.++||||||+++|+|++|+.||......+.            .......
T Consensus       188 ~~~~~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~------------~~~i~~~  252 (494)
T 3lij_A          188 VFENQKK--MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI------------LRKVEKG  252 (494)
T ss_dssp             ECBTTBC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHHHT
T ss_pred             ECCCCcc--ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHH------------HHHHHhC
Confidence            7654322  23457999999999986 4699999999999999999999999976532211            1111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ....      ...........+.+++.+||+.||++|||++|++++
T Consensus       253 ~~~~------~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  292 (494)
T 3lij_A          253 KYTF------DSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH  292 (494)
T ss_dssp             CCCC------CSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             CCCC------CchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence            1100      000001224567889999999999999999999853

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=4.2e-37  Score=349.60  Aligned_cols=256  Identities=25%  Similarity=0.328  Sum_probs=205.3

Q ss_pred             HHHhhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      ....|.+.++||+|+||+||++...  .++..||||.+....  ......+.+|++++++++||||+++++++.+....+
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   97 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDR--ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY   97 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEET--TTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhcceEEeEEEeecCCEEEEEEEEC--CCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEE
Confidence            3467888999999999999999886  667799999986432  234568899999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +||||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++...  .++.+||+|||++
T Consensus        98 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~--~~~~~kl~Dfg~a  171 (486)
T 3mwu_A           98 IVGELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKE--KDCDIKIIDFGLS  171 (486)
T ss_dssp             EEECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSS--TTCCEEECSCSCT
T ss_pred             EEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCC--CCCCEEEEECCcC
Confidence            999999999999988655 5689999999999999999999999   999999999999997433  5678999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ........  .....||+.|+|||++.+ .++.++||||||+++|+|++|+.||......+.            ......
T Consensus       172 ~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~------------~~~i~~  236 (486)
T 3mwu_A          172 TCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI------------LKRVET  236 (486)
T ss_dssp             TTBCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHHH
T ss_pred             eECCCCCc--cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------------HHHHHh
Confidence            87644322  234578999999999976 599999999999999999999999976532211            011111


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      +...      ............+.+++.+||+.||++|||+.|++++
T Consensus       237 ~~~~------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          237 GKYA------FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             TCCC------SCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             CCCC------CCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            1110      0001111234567899999999999999999999974

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=3.2e-37  Score=343.41  Aligned_cols=258  Identities=26%  Similarity=0.353  Sum_probs=194.1

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccch--------HHHHHHHHHHHHHhcCCCccccceEeeEE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--------EKTNEEFMTELKIIGRTHHKNLVRLLGFC  556 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~hpniv~~~~~~  556 (788)
                      .....|.+.+.||+|+||+||+|...  .++..||||.+....        ......+.+|++++++++||||+++++++
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~  209 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFER--KTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF  209 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEET--TTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEE
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEEC--CCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            34556888899999999999999886  667799999986532        11223578999999999999999999998


Q ss_pred             ecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEE
Q 047157          557 SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAK  636 (788)
Q Consensus       557 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~k  636 (788)
                      .. +..++||||+++++|.+++... ..+++..+..++.||+.||+|||++   +|+||||||+|||++..+  .+..+|
T Consensus       210 ~~-~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~--~~~~~k  282 (419)
T 3i6u_A          210 DA-EDYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQE--EDCLIK  282 (419)
T ss_dssp             ES-SEEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSS--SSCCEE
T ss_pred             ec-CceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCC--CcceEE
Confidence            54 5689999999999999998654 5689999999999999999999999   999999999999997433  456799


Q ss_pred             EeecCCccccCCCCCcccccccCCccccCccccc---CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh
Q 047157          637 ISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL  713 (788)
Q Consensus       637 L~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~  713 (788)
                      |+|||+++......  ......||+.|+|||++.   ...++.++||||||+++|||++|+.||........       +
T Consensus       283 l~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-------~  353 (419)
T 3i6u_A          283 ITDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-------L  353 (419)
T ss_dssp             ECCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-------H
T ss_pred             EeecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-------H
Confidence            99999998765332  223467899999999985   36788999999999999999999999975422211       0


Q ss_pred             HHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          714 SDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       714 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ..    ..........    +  .......+.+.+++.+||+.||++|||++|++++
T Consensus       354 ~~----~i~~~~~~~~----~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  400 (419)
T 3i6u_A          354 KD----QITSGKYNFI----P--EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  400 (419)
T ss_dssp             HH----HHHTTCCCCC----H--HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HH----HHhcCCCCCC----c--hhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            00    0111110000    0  0001224678899999999999999999999874

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=2.1e-37  Score=341.60  Aligned_cols=249  Identities=21%  Similarity=0.335  Sum_probs=192.7

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCC--ccccceEeeEEecCCeEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTH--HKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~~~~l  564 (788)
                      .|.+.+.||+|+||.||++...   .+..||||.+...  .....+.+.+|++++.+++  ||||+++++++...+..++
T Consensus        57 ~y~~~~~LG~G~fg~Vy~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l  133 (390)
T 2zmd_A           57 IYSILKQIGSGGSSKVFQVLNE---KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM  133 (390)
T ss_dssp             EEEEEEEEECCSSEEEEEEECT---TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             ceEEEEEEccCCCeEEEEEEcC---CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence            3677799999999999999864   3678999988643  3455678999999999996  5999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||| +.+++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++      ++.+||+|||++.
T Consensus       134 v~E-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~------~~~~kl~DFG~a~  202 (390)
T 2zmd_A          134 VME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV------DGMLKLIDFGIAN  202 (390)
T ss_dssp             EEE-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES------SSCEEECCCSSSC
T ss_pred             EEe-cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE------CCeEEEEecCccc
Confidence            999 5688999999765 4778889999999999999999999   999999999999995      3689999999998


Q ss_pred             ccCCCCCc-ccccccCCccccCcccccC-----------CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh
Q 047157          645 LLNKDQTR-TDTNMRGTMGYVAPEWLRN-----------VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV  712 (788)
Q Consensus       645 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~  712 (788)
                      .+...... ......||+.|+|||++.+           ..++.++|||||||++|||++|+.||.......        
T Consensus       203 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~--------  274 (390)
T 2zmd_A          203 QMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--------  274 (390)
T ss_dssp             CC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--------
T ss_pred             cccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH--------
Confidence            76543322 2334679999999999865           468899999999999999999999996432110        


Q ss_pred             hHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          713 LSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       713 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                        ... ........        ....+......+.+++.+||+.||++|||+.|++++
T Consensus       275 --~~~-~~~~~~~~--------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          275 --SKL-HAIIDPNH--------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             --HHH-HHHHCTTS--------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             --HHH-HHHhCccc--------cCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence              000 01111110        000011113567889999999999999999999864

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=3.8e-37  Score=326.31  Aligned_cols=248  Identities=28%  Similarity=0.404  Sum_probs=195.1

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCCC
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      ..+||+|+||.||+|...  .++..||||.+........+.+.+|+.++++++||||+++++++.+.+..++||||++++
T Consensus        27 ~~~lg~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  104 (295)
T 2clq_A           27 RVVLGKGTYGIVYAGRDL--SNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGG  104 (295)
T ss_dssp             BCEEEECSSSEEEEEEET--TTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred             cEEEeecCcEEEEEEEEC--CCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCC
Confidence            358999999999999886  667799999997765666778999999999999999999999999999999999999999


Q ss_pred             CHhHhhhccC--CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCC
Q 047157          573 TLSNFLFHEG--QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ  650 (788)
Q Consensus       573 sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~  650 (788)
                      +|.+++....  ...++..+..++.||+.||.|||++   +|+|+||||+||+++.    .++.+||+|||++.......
T Consensus       105 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~----~~~~~kl~Dfg~~~~~~~~~  177 (295)
T 2clq_A          105 SLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINT----YSGVLKISDFGTSKRLAGIN  177 (295)
T ss_dssp             EHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEET----TTCCEEECCTTTCEESCC--
T ss_pred             CHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEEC----CCCCEEEeecccccccCCCC
Confidence            9999997653  3457888999999999999999999   9999999999999982    27899999999998764322


Q ss_pred             CcccccccCCccccCcccccCCC--CCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          651 TRTDTNMRGTMGYVAPEWLRNVP--VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       651 ~~~~~~~~gt~~y~aPE~~~~~~--~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      . ......|++.|+|||.+.+..  ++.++||||||+++|||++|+.||........      ....   ... ..    
T Consensus       178 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~~---~~~-~~----  242 (295)
T 2clq_A          178 P-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA------AMFK---VGM-FK----  242 (295)
T ss_dssp             ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH------HHHH---HHH-HC----
T ss_pred             C-cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH------HHHh---hcc-cc----
Confidence            1 123456899999999987643  88999999999999999999999964321110      0000   000 00    


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                         ..+..  .......+.+++.+||+.||++|||++|+++
T Consensus       243 ---~~~~~--~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          243 ---VHPEI--PESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             ---CCCCC--CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             ---ccccc--cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence               00111  1123456788999999999999999999986

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.5e-37  Score=334.33  Aligned_cols=266  Identities=22%  Similarity=0.276  Sum_probs=197.2

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHH-HHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK-TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .|.+.+.||+|+||+||+|...  .++..||+|.+...... ....+.+|++++++++||||+++++++.+.+..++|||
T Consensus         3 ~y~~~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (324)
T 3mtl_A            3 TYIKLDKLGEGTYATVYKGKSK--LTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE   80 (324)
T ss_dssp             SEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             ceEEEEEEcCCCCEEEEEEEEC--CCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence            4667789999999999999886  56779999998654322 12245679999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |++ ++|.+++...+..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++....
T Consensus        81 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~-----~~~~~kl~Dfg~a~~~~  151 (324)
T 3mtl_A           81 YLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLIN-----ERGELKLADFGLARAKS  151 (324)
T ss_dssp             CCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEEC-----TTCCEEECSSSEEECC-
T ss_pred             ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEEC-----CCCCEEEccCccccccc
Confidence            997 599999988777899999999999999999999999   999999999999998     77899999999998654


Q ss_pred             CCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc--
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR--  724 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  724 (788)
                      .... ......+|+.|+|||++.+ ..++.++||||||+++|||++|+.||......+...        .........  
T Consensus       152 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~--------~i~~~~~~~~~  222 (324)
T 3mtl_A          152 IPTK-TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLH--------FIFRILGTPTE  222 (324)
T ss_dssp             ------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--------HHHHHHCCCCT
T ss_pred             CCcc-ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--------HHHHHhCCCCh
Confidence            3222 2233567999999999876 578999999999999999999999997654322111        011100000  


Q ss_pred             -ccccccc---------CCCCCc----ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH--HhhcC
Q 047157          725 -NLQVLVS---------HDPEVL----SDLERFERMAMVGLWCNHPDPNLRPSMKKVIH--MLEGT  774 (788)
Q Consensus       725 -~~~~l~~---------~~~~~~----~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~--~L~~~  774 (788)
                       .......         ......    ........+.+++.+||+.||++|||++|+++  .+.++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  288 (324)
T 3mtl_A          223 ETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL  288 (324)
T ss_dssp             TTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             HhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhc
Confidence             0000000         000000    00122356789999999999999999999987  34444

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=1.1e-37  Score=327.53  Aligned_cols=249  Identities=29%  Similarity=0.408  Sum_probs=194.9

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecC-CeEEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE-DKRLLVY  566 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-~~~~lV~  566 (788)
                      ..|.+.+.||+|+||+||++..    .+..||||.+....  ..+.+.+|++++++++||||+++++++.+. +..++||
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~----~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~   94 (278)
T 1byg_A           21 KELKLLQTIGKGEFGDVMLGDY----RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   94 (278)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEE----TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred             hhceEEeEEecCCCceEEEEEE----cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence            4567789999999999999976    35689999987543  456789999999999999999999987554 4789999


Q ss_pred             ecCCCCCHhHhhhccCC-CCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHEGQ-RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+++++|.+++..... .+++..++.++.|++.||.|||++   +|+||||||+||+++     .++.+||+|||++..
T Consensus        95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~-----~~~~~~l~Dfg~~~~  166 (278)
T 1byg_A           95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVS-----EDNVAKVSDFGLTKE  166 (278)
T ss_dssp             CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC-----TTSCEEECCCCC---
T ss_pred             ecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEe-----CCCcEEEeecccccc
Confidence            99999999999965532 378899999999999999999999   999999999999998     788999999999886


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .....    ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+..            ......
T Consensus       167 ~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~------------~~~~~~  230 (278)
T 1byg_A          167 ASSTQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV------------PRVEKG  230 (278)
T ss_dssp             -------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH------------HHHTTT
T ss_pred             ccccc----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH------------HHHhcC
Confidence            54322    22356889999999998899999999999999999998 99999754322110            111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      .         ...........+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus       231 ~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~  272 (278)
T 1byg_A          231 Y---------KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK  272 (278)
T ss_dssp             C---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             C---------CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence            0         00111123467888999999999999999999999998764

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=3.1e-38  Score=347.05  Aligned_cols=239  Identities=15%  Similarity=0.126  Sum_probs=186.4

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc---hHHHHHHHHHHH---HHhcCCCccccceEe-------eE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD---IEKTNEEFMTEL---KIIGRTHHKNLVRLL-------GF  555 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~---~~~~~~~~~~E~---~~l~~l~hpniv~~~-------~~  555 (788)
                      .|.+.+.||+|+||+||+|...  .++..||||++...   .....+.+.+|+   +++++++||||++++       ++
T Consensus        74 ~y~~~~~lG~G~~g~V~~a~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           74 TLVRGTVLGQEDPYAYLEATDQ--ETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             EEEEEEEEEEETTEEEEEEEC---CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             eEEEcceeecCCCEEEEEEEEC--CCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            3556789999999999999875  56779999998632   344567889999   566667899999998       66


Q ss_pred             EecCCe-----------------EEEEEecCCCCCHhHhhhccCCC------CCHHHHHHHHHHHHHHHHHhhhccCCce
Q 047157          556 CSEEDK-----------------RLLVYELMPNGTLSNFLFHEGQR------PGWVQRVEIALGVARGLLYLHEECETQI  612 (788)
Q Consensus       556 ~~~~~~-----------------~~lV~e~~~~gsL~~~l~~~~~~------~~~~~~~~i~~qi~~aL~~LH~~~~~~i  612 (788)
                      +.+.+.                 .++||||+ +|+|.+++...+..      +++..++.|+.||+.||+|||++   +|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence            665532                 78999999 68999999754322      23688889999999999999999   99


Q ss_pred             EecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCC-----------CCCccCcch
Q 047157          613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV-----------PVTTKVDVF  681 (788)
Q Consensus       613 vH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~s~k~DVw  681 (788)
                      +||||||+|||++     .++.+||+|||+++....    ......| +.|+|||++.+.           .++.++|||
T Consensus       228 vHrDikp~NIll~-----~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Dvw  297 (377)
T 3byv_A          228 VHTYLRPVDIVLD-----QRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAW  297 (377)
T ss_dssp             ECSCCCGGGEEEC-----TTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHH
T ss_pred             ecCCCCHHHEEEc-----CCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHH
Confidence            9999999999998     778999999999986432    2234567 999999999887           899999999


Q ss_pred             hhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCC
Q 047157          682 SFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLR  761 (788)
Q Consensus       682 SlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R  761 (788)
                      |||+++|||++|+.||..........                    .+.....      ...+.+.+++.+||+.||++|
T Consensus       298 SlG~il~elltg~~Pf~~~~~~~~~~--------------------~~~~~~~------~~~~~~~~li~~~L~~dp~~R  351 (377)
T 3byv_A          298 ALGLVIYWIWCADLPITKDAALGGSE--------------------WIFRSCK------NIPQPVRALLEGFLRYPKEDR  351 (377)
T ss_dssp             HHHHHHHHHHHSSCCC------CCSG--------------------GGGSSCC------CCCHHHHHHHHHHTCSSGGGC
T ss_pred             HHHHHHHHHHHCCCCCcccccccchh--------------------hhhhhcc------CCCHHHHHHHHHHcCCCchhC
Confidence            99999999999999997543222111                    1111000      123567889999999999999


Q ss_pred             CCHHHHHH
Q 047157          762 PSMKKVIH  769 (788)
Q Consensus       762 Pt~~evl~  769 (788)
                      ||+.|+++
T Consensus       352 pt~~e~l~  359 (377)
T 3byv_A          352 LLPLQAME  359 (377)
T ss_dssp             CCHHHHHT
T ss_pred             CCHHHHhh
Confidence            99999986

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=6.8e-38  Score=333.30  Aligned_cols=252  Identities=23%  Similarity=0.351  Sum_probs=199.2

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      ..|.+.+.||+|+||.||+|...  .++..||+|.+........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNK--ETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEET--TTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             cceeecceeccCCCeEEEEEEEc--CCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            35677899999999999999886  5677999999877666667889999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++++|.+++......+++..+..++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||++....
T Consensus        97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~-----~~~~~kl~Dfg~~~~~~  168 (302)
T 2j7t_A           97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMT-----LEGDIRLADFGVSAKNL  168 (302)
T ss_dssp             CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEC-----TTSCEEECCCHHHHHHH
T ss_pred             eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEC-----CCCCEEEEECCCCcccc
Confidence            9999999999987677899999999999999999999999   999999999999998     77899999999875432


Q ss_pred             CCCCcccccccCCccccCcccc-----cCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWL-----RNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~-----~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      ... .......|++.|+|||++     ....++.++||||||+++|||++|+.||........           ... ..
T Consensus       169 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----------~~~-~~  235 (302)
T 2j7t_A          169 KTL-QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-----------LLK-IA  235 (302)
T ss_dssp             HHH-HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-----------HHH-HH
T ss_pred             ccc-cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH-----------HHH-Hh
Confidence            111 111234689999999998     466789999999999999999999999975432110           000 11


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ...       .+...........+.+++.+||+.||++|||++|+++
T Consensus       236 ~~~-------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          236 KSD-------PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             HSC-------CCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             ccC-------CcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            111       1111112233456888999999999999999999976

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=1.2e-37  Score=331.38  Aligned_cols=261  Identities=21%  Similarity=0.340  Sum_probs=183.5

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ...|.+.+.||+|+||.||+|...  .++..||||.+.... ....+++.+|++++++++||||+++++++...+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (303)
T 2vwi_A           14 RDDYELQEVIGSGATAVVQAAYCA--PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV   91 (303)
T ss_dssp             CCCCEEEEECC---CCCEEEEEC------CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred             hhhhhhhheeccccceEEEEEEEC--CCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence            345667899999999999999875  566799999986543 33456788999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhc-------cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEe
Q 047157          566 YELMPNGTLSNFLFH-------EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS  638 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~-------~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~  638 (788)
                      |||+++++|.+++..       ....+++..++.++.||+.||.|||++   +|+||||||+||+++     .++.+||+
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~-----~~~~~kl~  163 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLG-----EDGSVQIA  163 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEC-----TTCCEEEC
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEc-----CCCCEEEE
Confidence            999999999999864       245689999999999999999999999   999999999999998     78899999


Q ss_pred             ecCCccccCCCCC----cccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh
Q 047157          639 DFGISKLLNKDQT----RTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL  713 (788)
Q Consensus       639 Dfg~a~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~  713 (788)
                      |||++........    .......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||.........       
T Consensus       164 dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-------  236 (303)
T 2vwi_A          164 DFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL-------  236 (303)
T ss_dssp             CCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH-------
T ss_pred             eccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHH-------
Confidence            9999876643221    11233568999999999875 56899999999999999999999999764322110       


Q ss_pred             HHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          714 SDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       714 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                          .. .........................+.+++.+||+.||++|||++|+++
T Consensus       237 ----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          237 ----ML-TLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             ----HH-HHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ----HH-HhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence                00 0011100000000000001122356788999999999999999999987

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=5.8e-37  Score=345.97  Aligned_cols=193  Identities=24%  Similarity=0.372  Sum_probs=153.4

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEec-----CCe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE-----EDK  561 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~  561 (788)
                      .|.+.++||+|+||+||+|.+.  .++..||||++...  .....+++.+|++++++++||||+++++++..     ...
T Consensus        54 ~y~~~~~lG~G~~g~V~~~~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           54 RYEIRHLIGTGSYGHVCEAYDK--LEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             TEEECCC-------CEEEEEEC--C--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CeEEeeEeeecCCeEEEEEEEC--CCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            4677899999999999999887  66779999988653  23455789999999999999999999999843     357


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      .|+||||+ +++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||
T Consensus       132 ~~lv~e~~-~~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~-----~~~~~kl~DFG  201 (458)
T 3rp9_A          132 LYVVLEIA-DSDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVN-----QDCSVKVCDFG  201 (458)
T ss_dssp             EEEEECCC-SEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEEC-----TTCCEEECCCT
T ss_pred             EEEEEecc-ccchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEEC-----CCCCEeecccc
Confidence            89999998 57899988544 6789999999999999999999999   999999999999998     78899999999


Q ss_pred             CccccCCCCC--------------------------cccccccCCccccCcccc-cCCCCCccCcchhhHHHHHHHHhC
Q 047157          642 ISKLLNKDQT--------------------------RTDTNMRGTMGYVAPEWL-RNVPVTTKVDVFSFGVMLLEIICG  693 (788)
Q Consensus       642 ~a~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~s~k~DVwSlGvil~elltg  693 (788)
                      +++.......                          .......||+.|+|||++ ....++.++|||||||++|||++|
T Consensus       202 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          202 LARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             TCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             cchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence            9987643221                          122345789999999976 566799999999999999999993

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=2.9e-37  Score=332.53  Aligned_cols=261  Identities=21%  Similarity=0.259  Sum_probs=202.8

Q ss_pred             HHHHHHhhccc-ccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCC-CccccceEeeEEec
Q 047157          483 QELQEATKGFS-KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSE  558 (788)
Q Consensus       483 ~~l~~~t~~~~-~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~  558 (788)
                      .+.....|.+. +.||+|+||.||+|...  .++..||+|.+....  ......+.+|+.++.++ +||||+++++++.+
T Consensus        23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~  100 (327)
T 3lm5_A           23 MENFNNFYILTSKELGRGKFAVVRQCISK--STGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN  100 (327)
T ss_dssp             HHHHHHHEEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             HHhhhhEEeeccceeCCCCCeEEEEEEEC--CCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe
Confidence            34444556665 89999999999999886  667799999986543  23457889999999998 57999999999999


Q ss_pred             CCeEEEEEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          559 EDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       559 ~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                      .+..++||||+++++|.+++... ...+++..++.++.||+.||.|||++   +|+||||||+|||++...  .++.+||
T Consensus       101 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~--~~~~~kL  175 (327)
T 3lm5_A          101 TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIY--PLGDIKI  175 (327)
T ss_dssp             SSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBT--TBCCEEE
T ss_pred             CCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCC--CCCcEEE
Confidence            99999999999999999998643 46789999999999999999999999   999999999999998322  3689999


Q ss_pred             eecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHH
Q 047157          638 SDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV  717 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~  717 (788)
                      +|||++........  .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+...          
T Consensus       176 ~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~----------  243 (327)
T 3lm5_A          176 VDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYL----------  243 (327)
T ss_dssp             CCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH----------
T ss_pred             eeCccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHH----------
Confidence            99999987653322  233578999999999999999999999999999999999999997643221100          


Q ss_pred             HHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       718 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                        ........      ..........+.+.+++.+||+.||++|||++|++++
T Consensus       244 --~i~~~~~~------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          244 --NISQVNVD------YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             --HHHHTCCC------CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             --HHHhcccc------cCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence              00000000      0001111234567889999999999999999999874

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=5.7e-38  Score=329.85  Aligned_cols=253  Identities=20%  Similarity=0.279  Sum_probs=201.7

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEe--cCCeEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCS--EEDKRLL  564 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--~~~~~~l  564 (788)
                      .|.+.+.||+|+||.||++...  .++..||+|.+...  .....+.+.+|++++++++||||+++++++.  .....++
T Consensus         7 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            7 DYEVLYTIGTGSYGRCQKIRRK--SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GEEEEEEEEECSSSEEEEEEET--TTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             heeeehhccCCCCcEEEEEEEC--CCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            4667799999999999999886  56779999998643  2445678999999999999999999999874  4678999


Q ss_pred             EEecCCCCCHhHhhhcc---CCCCCHHHHHHHHHHHHHHHHHhhhccCCc-----eEecCCCCCcEEeccCCCCCCCcEE
Q 047157          565 VYELMPNGTLSNFLFHE---GQRPGWVQRVEIALGVARGLLYLHEECETQ-----IIHCDIKPQNVLLDLKTLDTNYMAK  636 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~-----ivH~dlkp~NIll~~~~~~~~~~~k  636 (788)
                      ||||+++++|.+++...   ...+++..++.++.||+.||.|||++   +     |+||||||+||+++     .++.+|
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~-----~~~~~k  156 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLD-----GKQNVK  156 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEEC-----SSSCEE
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEc-----CCCCEE
Confidence            99999999999999653   34589999999999999999999998   7     99999999999998     788999


Q ss_pred             EeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHH
Q 047157          637 ISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDW  716 (788)
Q Consensus       637 L~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~  716 (788)
                      |+|||++......... .....+++.|+|||.+.+..++.++||||||+++|||++|+.||......+            
T Consensus       157 l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------------  223 (279)
T 2w5a_A          157 LGDFGLARILNHDTSF-AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE------------  223 (279)
T ss_dssp             ECCCCHHHHC---CHH-HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------------
T ss_pred             EecCchheeecccccc-ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH------------
Confidence            9999999876443221 223468999999999999899999999999999999999999997643211            


Q ss_pred             HHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          717 VISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       717 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                      .......+....+         .......+.+++.+||+.||++|||++||++.+..
T Consensus       224 ~~~~i~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          224 LAGKIREGKFRRI---------PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  271 (279)
T ss_dssp             HHHHHHHTCCCCC---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HHHHHhhcccccC---------CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence            0111111111111         11234578889999999999999999999987744

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=1.3e-37  Score=335.92  Aligned_cols=269  Identities=23%  Similarity=0.322  Sum_probs=198.5

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .|.+.+.||+|+||.||+|...  .++..||||++....  ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  103 (331)
T 4aaa_A           26 KYENLGLVGEGSYGMVMKCRNK--DTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF  103 (331)
T ss_dssp             GEEEEEEGGGGTTSSEEEEEET--TTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeEEeecCCEEEEEEEEC--CCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence            4677799999999999999886  667799999885432  344567889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++++|.+++.. ...+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++...
T Consensus       104 e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~-----~~~~~kl~Dfg~~~~~  174 (331)
T 4aaa_A          104 EFVDHTILDDLELF-PNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVS-----QSGVVKLCDFGFARTL  174 (331)
T ss_dssp             ECCSEEHHHHHHHS-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC-----TTSCEEECCCTTC---
T ss_pred             ecCCcchHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEc-----CCCcEEEEeCCCceee
Confidence            99999999887644 35689999999999999999999999   999999999999998     7789999999999866


Q ss_pred             CCCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh---HHHHHHHh-
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL---SDWVISCM-  721 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~-  721 (788)
                      ..... ......+++.|+|||.+.+. .++.++||||||+++|||++|+.||......+.........   ........ 
T Consensus       175 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (331)
T 4aaa_A          175 AAPGE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFN  253 (331)
T ss_dssp             ----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred             cCCcc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhh
Confidence            44322 22335689999999999775 78999999999999999999999997654322111000000   00000000 


Q ss_pred             hcccccccccCCCCCccc-----HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          722 LSRNLQVLVSHDPEVLSD-----LERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ..........+.......     ....+.+.+++.+||+.||++|||++|+++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          254 KNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             HCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             hccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            000011110011111111     123567889999999999999999999886

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=2.5e-37  Score=336.42  Aligned_cols=264  Identities=20%  Similarity=0.248  Sum_probs=200.2

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEec-------
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSE-------  558 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------  558 (788)
                      ..|.+.+.||+|+||+||+|...  .++..||||++....  ......+.+|++++++++||||+++++++..       
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   94 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHR--KTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR   94 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEET--TTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred             cceeEEEEEecCCCcEEEEEEEC--CCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence            35777899999999999999886  667799999885432  2234577899999999999999999999877       


Q ss_pred             -CCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          559 -EDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       559 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                       .+..++||||+++ +|.+.+......+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||
T Consensus        95 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~-----~~~~~kl  165 (351)
T 3mi9_A           95 CKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLIT-----RDGVLKL  165 (351)
T ss_dssp             --CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----TTSCEEE
T ss_pred             CCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEc-----CCCCEEE
Confidence             4568999999975 88888877767899999999999999999999999   999999999999998     7889999


Q ss_pred             eecCCccccCCCC---CcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh
Q 047157          638 SDFGISKLLNKDQ---TRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL  713 (788)
Q Consensus       638 ~Dfg~a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~  713 (788)
                      +|||++.......   ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||..........      
T Consensus       166 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~------  239 (351)
T 3mi9_A          166 ADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA------  239 (351)
T ss_dssp             CCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH------
T ss_pred             ccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHH------
Confidence            9999998764322   222334578999999998876 468999999999999999999999998653322111      


Q ss_pred             HHHHHHHhhc---ccccc--------cccC-CCCCcccHH------HHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          714 SDWVISCMLS---RNLQV--------LVSH-DPEVLSDLE------RFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       714 ~~~~~~~~~~---~~~~~--------l~~~-~~~~~~~~~------~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                        ........   .....        .+.. .........      ....+.+|+.+||+.||++|||++|++++
T Consensus       240 --~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          240 --LISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             --HHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             --HHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence              00000000   00000        0000 000000111      13457899999999999999999999874

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=7.4e-38  Score=340.78  Aligned_cols=264  Identities=14%  Similarity=0.163  Sum_probs=202.6

Q ss_pred             HhhcccccccccccceEEEEEEeccC------cceeeeeeecccchHHHHHHHHHHHHHhcCCCccccce----------
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKD------TQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR----------  551 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~------~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~----------  551 (788)
                      ..|.+.+.||+|+||.||+|......      .+..||+|.+...     +.+.+|++++++++||||++          
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            35677899999999999999986321      3679999998754     46779999999999999987          


Q ss_pred             -----EeeEEec-CCeEEEEEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEe
Q 047157          552 -----LLGFCSE-EDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLL  624 (788)
Q Consensus       552 -----~~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll  624 (788)
                           +++++.. +...++||||+ +++|.+++... ...+++..++.++.||+.||.|||++   +|+||||||+|||+
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~  192 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFV  192 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEE
T ss_pred             cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEE
Confidence                 6677765 77899999999 99999999764 46789999999999999999999999   99999999999999


Q ss_pred             ccCCCCCCC--cEEEeecCCccccCCCCCc------ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCC
Q 047157          625 DLKTLDTNY--MAKISDFGISKLLNKDQTR------TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRH  696 (788)
Q Consensus       625 ~~~~~~~~~--~~kL~Dfg~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p  696 (788)
                      +     .++  .+||+|||++..+......      ......||+.|+|||.+.+..++.++||||||+++|||++|+.|
T Consensus       193 ~-----~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p  267 (352)
T 2jii_A          193 D-----PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP  267 (352)
T ss_dssp             E-----TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred             c-----CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            8     666  8999999999876533211      12335789999999999999999999999999999999999999


Q ss_pred             CCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          697 IELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       697 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      |........      ....... .. ......+......   .....+.+.+++.+||+.||++|||+++|+++|+++..
T Consensus       268 f~~~~~~~~------~~~~~~~-~~-~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  336 (352)
T 2jii_A          268 WTNCLPNTE------DIMKQKQ-KF-VDKPGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQ  336 (352)
T ss_dssp             TGGGTTCHH------HHHHHHH-HH-HHSCCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred             cccCCcCHH------HHHHHHH-hc-cCChhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHH
Confidence            976431110      0111110 01 1111111111100   01123678889999999999999999999999987753

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=5.7e-37  Score=348.71  Aligned_cols=252  Identities=25%  Similarity=0.301  Sum_probs=202.5

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchH---HHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE---KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .+.+.++||+|+||.||++..+  .++..||+|++.+...   ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus       186 ~f~~~~~LG~G~fG~Vy~a~~~--~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          186 WFLDFRVLGRGGFGEVFACQMK--ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GEEEEEEEEECSSSEEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             heEEEEEEeeCCCeEEEEEEEC--CCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            4555688999999999999886  6778999999975432   2346788999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhcc---CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          566 YELMPNGTLSNFLFHE---GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      |||+++|+|.+++...   ...+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~-----~~g~vkL~DFGl  335 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLD-----DDGNVRISDLGL  335 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC-----TTSCEEECCCTT
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEe-----CCCCEEEeecce
Confidence            9999999999998654   34689999999999999999999999   999999999999998     888999999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      +..+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..........       . ......
T Consensus       336 a~~~~~~~~~-~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~-------~-~~~~i~  406 (543)
T 3c4z_A          336 AVELKAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENK-------E-LKQRVL  406 (543)
T ss_dssp             CEECCTTCCC-BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHH-------H-HHHHHH
T ss_pred             eeeccCCCcc-cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHH-------H-HHHHHh
Confidence            9876543322 233579999999999999999999999999999999999999997643211100       0 111111


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCH-----HHHHH
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSM-----KKVIH  769 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~  769 (788)
                      ....        ..  +......+.+++.+||+.||++||++     ++|++
T Consensus       407 ~~~~--------~~--p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          407 EQAV--------TY--PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             HCCC--------CC--CTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             hccc--------CC--CcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence            1111        00  11224567889999999999999975     66664

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=2.4e-37  Score=351.64  Aligned_cols=255  Identities=25%  Similarity=0.320  Sum_probs=206.4

Q ss_pred             HHHhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      ....|.+.++||+|+||.||++...  .++..||||.+....   ....+.+.+|++++++++||||+++++++.+.+..
T Consensus        24 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  101 (484)
T 3nyv_A           24 FSDRYKGQRVLGKGSFGEVILCKDK--ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYF  101 (484)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             ccCceEEeeEEecCCCEEEEEEEEC--CCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            3457888899999999999999886  677799999986432   33467889999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||+.+++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++...  .++.+||+|||+
T Consensus       102 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~--~~~~~kl~Dfg~  175 (484)
T 3nyv_A          102 YLVGEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKS--KDANIRIIDFGL  175 (484)
T ss_dssp             EEEECCCCSCBHHHHHHTC-SCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSS--TTCCEEECCTTH
T ss_pred             EEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCC--CCCcEEEEeeee
Confidence            9999999999999998654 5689999999999999999999999   999999999999996433  678999999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      +........  .....||+.|+|||++.+ .++.++||||||+++|+|++|+.||......+.            ...+.
T Consensus       176 a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~------------~~~i~  240 (484)
T 3nyv_A          176 STHFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDI------------LKKVE  240 (484)
T ss_dssp             HHHBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHH
T ss_pred             eEEcccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH------------HHHHH
Confidence            987654332  233568999999999876 699999999999999999999999976532211            01111


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .+...      ..........+.+.+++.+||+.||++|||++|+++
T Consensus       241 ~~~~~------~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          241 KGKYT------FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             HCCCC------CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cCCCC------CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence            11111      001111123466888999999999999999999986

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=4.5e-37  Score=324.22  Aligned_cols=250  Identities=21%  Similarity=0.293  Sum_probs=198.5

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~  563 (788)
                      ...|.+.+.||+|+||+||+|...  .++..||+|.+...  ......++.+|+..+.++ +||||+++++++.+.+..+
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~   87 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKR--LDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML   87 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEc--CCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence            456778899999999999999886  56779999998753  234456788999999998 9999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhcc---CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCC-----------
Q 047157          564 LVYELMPNGTLSNFLFHE---GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL-----------  629 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~-----------  629 (788)
                      +||||+++++|.+++...   ...+++..++.++.||+.||.|||++   +|+||||||+|||++..+.           
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~  164 (289)
T 1x8b_A           88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDED  164 (289)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------------
T ss_pred             EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccc
Confidence            999999999999999654   25689999999999999999999999   9999999999999974321           


Q ss_pred             ---CCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccc
Q 047157          630 ---DTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEE  705 (788)
Q Consensus       630 ---~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~  705 (788)
                         .....+||+|||.+.......     ...|++.|+|||.+.+. .+++++||||||+++|||++|..++.....   
T Consensus       165 ~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---  236 (289)
T 1x8b_A          165 DWASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---  236 (289)
T ss_dssp             -----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH---
T ss_pred             cccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH---
Confidence               034579999999998765432     23589999999999765 667899999999999999999987643311   


Q ss_pred             cccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          706 SEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       706 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                                  ...........+    +     ......+.+++.+||+.||++|||+.|++++
T Consensus       237 ------------~~~~~~~~~~~~----~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  280 (289)
T 1x8b_A          237 ------------WHEIRQGRLPRI----P-----QVLSQEFTELLKVMIHPDPERRPSAMALVKH  280 (289)
T ss_dssp             ------------HHHHHTTCCCCC----S-----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             ------------HHHHHcCCCCCC----C-----cccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence                        011111111111    0     1123567889999999999999999999864

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=1.2e-37  Score=341.50  Aligned_cols=251  Identities=11%  Similarity=0.026  Sum_probs=180.5

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHH---HHhcCCCccccceEe-------eEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTEL---KIIGRTHHKNLVRLL-------GFC  556 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~---~~l~~l~hpniv~~~-------~~~  556 (788)
                      |.+.+.||+|+||+||+|.+.  .++..||||++....   ....+.+.+|+   +.++. +||||++++       +++
T Consensus        64 y~~~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           64 LKLVEPLRVGDRSVVFLVRDV--ERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEECSSEEEEEEEET--TTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred             eeeeeeccCCCCEEEEEEEEC--CCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence            556789999999999999886  667899999997643   34456777885   45555 799988755       444


Q ss_pred             ecC-----------------CeEEEEEecCCCCCHhHhhhccCCCCCHHHH------HHHHHHHHHHHHHhhhccCCceE
Q 047157          557 SEE-----------------DKRLLVYELMPNGTLSNFLFHEGQRPGWVQR------VEIALGVARGLLYLHEECETQII  613 (788)
Q Consensus       557 ~~~-----------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~------~~i~~qi~~aL~~LH~~~~~~iv  613 (788)
                      ...                 ...++||||++ ++|.+++...+..+++..+      +.++.||+.||+|||++   +|+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~iv  216 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLV  216 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCc
Confidence            332                 34799999998 8999999765455565666      78889999999999999   999


Q ss_pred             ecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccC--CCCCccCcchhhHHHHHHHH
Q 047157          614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN--VPVTTKVDVFSFGVMLLEII  691 (788)
Q Consensus       614 H~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~k~DVwSlGvil~ell  691 (788)
                      ||||||+|||++     .++.+||+|||+++......    ....+++.|+|||++.+  ..++.++||||||+++|||+
T Consensus       217 HrDikp~NIll~-----~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ell  287 (371)
T 3q60_A          217 HGHFTPDNLFIM-----PDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVW  287 (371)
T ss_dssp             ETTCSGGGEEEC-----TTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHH
T ss_pred             cCcCCHHHEEEC-----CCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHH
Confidence            999999999998     78899999999998654221    13456799999999987  78999999999999999999


Q ss_pred             hCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          692 CGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       692 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      +|+.||.............             ....................+.+.+++.+||+.||++|||+.|+++
T Consensus       288 tg~~Pf~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          288 CLFLPFGLVTPGIKGSWKR-------------PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             HSSCSTTBCCTTCTTCCCB-------------CCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             hCCCCCCCcCcccccchhh-------------hhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            9999997653221110000             0000000001111111123467888999999999999999999975

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=5e-37  Score=360.62  Aligned_cols=250  Identities=27%  Similarity=0.327  Sum_probs=204.4

Q ss_pred             HHHhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCe
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDK  561 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~  561 (788)
                      ....|.+.++||+|+||.||+|...  .++..||||++.+..   ....+.+..|..++..+ +||+|+++++++.+.+.
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~--~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~  416 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERK--GTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR  416 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEES--SSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE
T ss_pred             cccceEEEEEEccCCCEEEEEEEEC--CCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE
Confidence            3345677799999999999999887  677789999997542   23446788899999987 79999999999999999


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      .||||||+++|+|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+||||+     .++.+||+|||
T Consensus       417 ~~lV~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~-----~~g~ikL~DFG  487 (674)
T 3pfq_A          417 LYFVMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLD-----SEGHIKIADFG  487 (674)
T ss_dssp             EEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEEC-----SSSCEEECCCT
T ss_pred             EEEEEeCcCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEc-----CCCcEEEeecc
Confidence            99999999999999999765 4689999999999999999999999   999999999999998     88899999999


Q ss_pred             CccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      +++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...+..+.            ...+
T Consensus       488 la~~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~------------~~~i  554 (674)
T 3pfq_A          488 MCKENIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL------------FQSI  554 (674)
T ss_dssp             TCEECCCTTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHH
T ss_pred             eeeccccCCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH------------HHHH
Confidence            9986433222 23456899999999999999999999999999999999999999976532211            1111


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCH-----HHHHH
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSM-----KKVIH  769 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~  769 (788)
                      ....        +..  +.....++.+|+..||+.||++||++     +||++
T Consensus       555 ~~~~--------~~~--p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          555 MEHN--------VAY--PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             HSSC--------CCC--CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             HhCC--------CCC--CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence            1111        111  11234578889999999999999997     77765

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=1.9e-37  Score=363.04  Aligned_cols=261  Identities=23%  Similarity=0.356  Sum_probs=206.9

Q ss_pred             HHHHhhcccccccccccceEEEEEEecc-Ccceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      +....+.+.+.||+|+||.||+|.+... .....||||.+... .....+.+.+|+.++++++||||+++++++. ++..
T Consensus       387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~  465 (656)
T 2j0j_A          387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV  465 (656)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred             cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence            3345677889999999999999988632 34568999988653 3445578999999999999999999999985 4568


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||+++|+|.+++......+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+
T Consensus       466 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~-----~~~~vkL~DFG~  537 (656)
T 2j0j_A          466 WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVS-----SNDCVKLGDFGL  537 (656)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEE-----ETTEEEECCCCC
T ss_pred             EEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEe-----CCCCEEEEecCC
Confidence            999999999999999987767789999999999999999999999   999999999999998     778999999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      +...............+++.|+|||.+.+..++.++||||||+++|||++ |..||......+.            ....
T Consensus       538 a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~------------~~~i  605 (656)
T 2j0j_A          538 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV------------IGRI  605 (656)
T ss_dssp             CCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH------------HHHH
T ss_pred             CeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH------------HHHH
Confidence            98775544333334557789999999998899999999999999999997 9999975432211            0111


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ..+....         ........+.+++.+||+.||++|||+.||++.|+.++
T Consensus       606 ~~~~~~~---------~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          606 ENGERLP---------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  650 (656)
T ss_dssp             HHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HcCCCCC---------CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            1111000         11123457888999999999999999999999998764

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.4e-37  Score=336.22  Aligned_cols=270  Identities=23%  Similarity=0.284  Sum_probs=196.5

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCC------
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED------  560 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------  560 (788)
                      .|.+.+.||+|+||.||+|...  .++..||||++...  .....+++.+|+++++.++||||+++++++...+      
T Consensus        26 ~y~~~~~lG~G~~g~V~~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           26 VYRDLQPVGSGAYGAVCSAVDG--RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             SEEEEEEC------CEEEEEET--TTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             eEEEeEEeeecCCeEEEEEEEC--CCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            4667789999999999999886  67779999998543  2445678899999999999999999999997653      


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ..++||||+ +++|.+++..  ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+||
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~-----~~~~~kl~Df  172 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVN-----EDCELKILDF  172 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC-----TTCCEEECCC
T ss_pred             eEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEc-----CCCCEEEEee
Confidence            469999999 8899999865  4688999999999999999999999   999999999999998     7889999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh---HHH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL---SDW  716 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~  716 (788)
                      |+++.....    .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+.........   ...
T Consensus       173 g~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~  248 (367)
T 1cm8_A          173 GLARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAE  248 (367)
T ss_dssp             TTCEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred             ecccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence            999875432    234578999999999877 689999999999999999999999998654322111100000   000


Q ss_pred             HHHHhhcccccccccCCC----CC--cccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--hhcCc
Q 047157          717 VISCMLSRNLQVLVSHDP----EV--LSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM--LEGTL  775 (788)
Q Consensus       717 ~~~~~~~~~~~~l~~~~~----~~--~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~~~  775 (788)
                      ....+........+...+    ..  .........+.+++.+||+.||++|||++|++++  +++..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          249 FVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             HHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             HHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence            000000000000000000    00  0011224568889999999999999999999984  55543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=5.1e-37  Score=326.81  Aligned_cols=248  Identities=24%  Similarity=0.352  Sum_probs=202.9

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .|.+.+.||+|+||.||+|...  .++..||||.+.... ....+.+.+|+.++++++||||+++++++.+....++|||
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           23 LFTKLEKIGKGSFGEVFKGIDN--RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             TEEEEEEEEECSSSEEEEEEET--TTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHhhhhcccCCeEEEEEEEC--CCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            3666789999999999999876  567799999986443 3446789999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++++|.+++..  ..+++..+..++.||+.||.|||++   +|+|+||||+||+++     .++.+||+|||++....
T Consensus       101 ~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~-----~~~~~kl~Dfg~~~~~~  170 (303)
T 3a7i_A          101 YLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLS-----EHGEVKLADFGVAGQLT  170 (303)
T ss_dssp             CCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----TTSCEEECCCTTCEECB
T ss_pred             eCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEEC-----CCCCEEEeecccceecC
Confidence            9999999999854  4689999999999999999999999   999999999999998     77899999999998765


Q ss_pred             CCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      .... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||........        .    .........
T Consensus       171 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------~----~~~~~~~~~  237 (303)
T 3a7i_A          171 DTQI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV--------L----FLIPKNNPP  237 (303)
T ss_dssp             TTBC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--------H----HHHHHSCCC
T ss_pred             cccc-ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHH--------H----HHhhcCCCC
Confidence            4322 22345789999999999999999999999999999999999999975422110        0    011111111


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .+         .......+.+++..||+.||++|||++|++++
T Consensus       238 ~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          238 TL---------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             CC---------CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             CC---------ccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            00         11123567889999999999999999999874

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=6.2e-37  Score=321.40  Aligned_cols=247  Identities=23%  Similarity=0.347  Sum_probs=193.8

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||.||+|...  .++..||||.+....   ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        12 ~y~i~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           12 HYVLGDTLGVGTFGKVKIGEHQ--LTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cEEEEeeecCCCCeEEEEEEEC--CCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            4667799999999999999886  567799999986543   23356889999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+|+||||+||+++     .++.+||+|||++..
T Consensus        90 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~-----~~~~~~l~dfg~~~~  160 (276)
T 2h6d_A           90 MEYVSGGELFDYICKH-GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLD-----AHMNAKIADFGLSNM  160 (276)
T ss_dssp             EECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEEC-----TTSCEEECCCCGGGC
T ss_pred             EeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEEC-----CCCCEEEeecccccc
Confidence            9999999999999655 4688999999999999999999999   999999999999998     778999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCC-CccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ......  .....+++.|+|||.+.+..+ +.++||||||+++|+|++|+.||........            .......
T Consensus       161 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------------~~~~~~~  226 (276)
T 2h6d_A          161 MSDGEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL------------FKKIRGG  226 (276)
T ss_dssp             CCC---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHHHC
T ss_pred             cCCCcc--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH------------HHHhhcC
Confidence            654322  223468899999999987765 6899999999999999999999975422110            1111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ...     .+     ......+.+++.+||+.||++|||++|++++
T Consensus       227 ~~~-----~~-----~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          227 VFY-----IP-----EYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             CCC-----CC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             ccc-----Cc-----hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            100     01     1123567889999999999999999999974

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=9.5e-37  Score=343.69  Aligned_cols=263  Identities=19%  Similarity=0.281  Sum_probs=205.9

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCc-cccceEeeEEecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHH-KNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~~lV~e  567 (788)
                      .|.+.++||+|+||.||+|.+.  .++..||||++....  ...++.+|+++++.++| ++|..+..++.+.+..+||||
T Consensus         8 ~y~i~~~LG~G~fG~Vy~a~~~--~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            8 KFRLGRKIGSGSFGEIYLGTNI--QTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TEECCCCCEECSSCEEEEEEET--TTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             cEEEEEEEeeCCCEEEEEEEEC--CCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            4667899999999999999876  567799999876432  23457889999999976 566667777788889999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+ +++|.+++......+++..++.|+.||+.||.|||++   +|+||||||+||||+...  .++.+||+|||+++...
T Consensus        84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~--~~~~vkL~DFGla~~~~  157 (483)
T 3sv0_A           84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGR--RANQVYIIDFGLAKKYR  157 (483)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGG--GTTCEEECCCTTCEECB
T ss_pred             CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCC--CCCeEEEEeCCcceecc
Confidence            99 9999999987777899999999999999999999999   999999999999994221  67899999999998765


Q ss_pred             CCCCc------ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          648 KDQTR------TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       648 ~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      .....      ......||+.|+|||.+.+..++.++||||||++||||++|+.||............     .......
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~-----~~i~~~~  232 (483)
T 3sv0_A          158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKY-----EKISEKK  232 (483)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHH-----HHHHHHH
T ss_pred             CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHH-----HHHhhcc
Confidence            43321      122567999999999999999999999999999999999999999765332211111     0011111


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ....+..+..         ...+++.+++..||+.||++||++++|+++|+.+.
T Consensus       233 ~~~~~~~l~~---------~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~  277 (483)
T 3sv0_A          233 VATSIEALCR---------GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF  277 (483)
T ss_dssp             HHSCHHHHHT---------TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred             ccccHHHHhc---------CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            1111111111         12457889999999999999999999999998763

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-37  Score=338.84  Aligned_cols=257  Identities=26%  Similarity=0.296  Sum_probs=202.1

Q ss_pred             HhhcccccccccccceEEEEEEec-cCcceeeeeeecccch----HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRL-KDTQIEIAVKKLEKDI----EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDK  561 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~  561 (788)
                      ..|.+.+.||+|+||.||++.... ..++..||||++....    ....+.+.+|+++++++ +||||+++++++...+.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            357778999999999999998742 2467799999986432    22345677899999999 69999999999999999


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      .++||||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~-----~~~~~kl~DfG  204 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLD-----SNGHVVLTDFG  204 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC-----TTSCEEESCSS
T ss_pred             EEEEeecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEC-----CCCcEEEeeCC
Confidence            99999999999999999655 4688999999999999999999999   999999999999998     78899999999


Q ss_pred             CccccCCCCCcccccccCCccccCcccccC--CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHH
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLRN--VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVIS  719 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  719 (788)
                      +++..............||+.|+|||++.+  ..++.++||||||+++|||++|+.||..........       ... .
T Consensus       205 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~-------~~~-~  276 (355)
T 1vzo_A          205 LSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA-------EIS-R  276 (355)
T ss_dssp             EEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHH-------HHH-H
T ss_pred             CCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHH-------HHH-H
Confidence            998765444444445679999999999975  457899999999999999999999997543221110       000 0


Q ss_pred             HhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHHh
Q 047157          720 CMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIHML  771 (788)
Q Consensus       720 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~L  771 (788)
                      .....        .+..  .......+.+++.+||+.||++||     +++|++++.
T Consensus       277 ~~~~~--------~~~~--~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~  323 (355)
T 1vzo_A          277 RILKS--------EPPY--PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL  323 (355)
T ss_dssp             HHHHC--------CCCC--CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred             HHhcc--------CCCC--CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence            01000        1111  112235677899999999999999     999998765

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=8.6e-37  Score=348.55  Aligned_cols=254  Identities=24%  Similarity=0.331  Sum_probs=200.5

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchH-------------HHHHHHHHHHHHhcCCCccccceEee
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE-------------KTNEEFMTELKIIGRTHHKNLVRLLG  554 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~-------------~~~~~~~~E~~~l~~l~hpniv~~~~  554 (788)
                      ..|.+.++||+|+||+||+|...  .++..||+|.+.....             ...+.+.+|++++++++||||+++++
T Consensus        36 ~~Y~~~~~lG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           36 ESYFKVRKLGSGAYGEVLLCKEK--NGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GTEEEEEEEEC--CEEEEEEEET--TTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cceEEEeEecccCCeEEEEEEEC--CCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            45777899999999999999886  6677999999865321             33567899999999999999999999


Q ss_pred             EEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCc
Q 047157          555 FCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM  634 (788)
Q Consensus       555 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~  634 (788)
                      ++.+....++||||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++..+  ....
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~--~~~~  187 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKN--SLLN  187 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTT--CCSS
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCC--CCcc
Confidence            999999999999999999999998655 5689999999999999999999999   999999999999998432  3347


Q ss_pred             EEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhH
Q 047157          635 AKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS  714 (788)
Q Consensus       635 ~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~  714 (788)
                      +||+|||++........  .....||+.|+|||++.+ .++.++||||||+++|+|++|+.||......+..        
T Consensus       188 ~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~--------  256 (504)
T 3q5i_A          188 IKIVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDII--------  256 (504)
T ss_dssp             EEECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--------
T ss_pred             EEEEECCCCEEcCCCCc--cccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHH--------
Confidence            99999999987654322  234579999999999874 6899999999999999999999999765322111        


Q ss_pred             HHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          715 DWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       715 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                          .....+....      ...........+.+++.+||+.||.+|||++|++++
T Consensus       257 ----~~i~~~~~~~------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          257 ----KKVEKGKYYF------DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             ----HHHHHCCCCC------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ----HHHHcCCCCC------CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence                1111111100      000001124568899999999999999999999863

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.6e-37  Score=332.40  Aligned_cols=264  Identities=21%  Similarity=0.254  Sum_probs=199.0

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHH-----HHHHHHHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK-----TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      ..|.+.+.||+|+||.||+|...  .++..||||.+......     ..+.+.+|++++++++||||+++++++.+.+..
T Consensus        10 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (346)
T 1ua2_A           10 KRYEKLDFLGEGQFATVYKARDK--NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI   87 (346)
T ss_dssp             ---CEEEEEEEETTEEEEEEECS--SCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred             cccEEEeEEeecCCEEEEEEEEC--CCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence            45677899999999999999876  56779999998643221     124688999999999999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||+++ +|.+++......+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+
T Consensus        88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~-----~~~~~kl~Dfg~  158 (346)
T 1ua2_A           88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLD-----ENGVLKLADFGL  158 (346)
T ss_dssp             EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC-----TTCCEEECCCGG
T ss_pred             EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEc-----CCCCEEEEeccc
Confidence            999999976 89999877767788999999999999999999999   999999999999998     788999999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      +........ ......+|+.|+|||.+.+. .++.++||||||+++|||++|..||......+..       .. .....
T Consensus       159 a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~-------~~-i~~~~  229 (346)
T 1ua2_A          159 AKSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL-------TR-IFETL  229 (346)
T ss_dssp             GSTTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-------HH-HHHHH
T ss_pred             ceeccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHH-------HH-HHHHc
Confidence            987643322 22345789999999998654 5889999999999999999999998765322111       01 11111


Q ss_pred             hcc---cccc------cccCCCCCccc-----HHHHHHHHHHHhHccCCCCCCCCCHHHHHHHh
Q 047157          722 LSR---NLQV------LVSHDPEVLSD-----LERFERMAMVGLWCNHPDPNLRPSMKKVIHML  771 (788)
Q Consensus       722 ~~~---~~~~------l~~~~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L  771 (788)
                      ...   ....      .+.........     ......+.+++.+||+.||++|||++|++++-
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~  293 (346)
T 1ua2_A          230 GTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK  293 (346)
T ss_dssp             CCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred             CCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence            000   0000      00000000000     12236788999999999999999999999753

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=1.4e-36  Score=327.58  Aligned_cols=264  Identities=17%  Similarity=0.204  Sum_probs=198.1

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC-ccccceEeeEEec--CCeEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVRLLGFCSE--EDKRLL  564 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~--~~~~~l  564 (788)
                      ..|.+.+.||+|+||+||+|...  .++..||||.+...   ..+.+.+|++++++++ ||||+++++++.+  ....++
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l  110 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINI--TNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL  110 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred             CceEEEEEecccCCeEEEEEEEC--CCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence            45777899999999999999886  66779999998743   2467889999999997 9999999999987  668899


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCC-cEEEeecCCc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNY-MAKISDFGIS  643 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~-~~kL~Dfg~a  643 (788)
                      ||||+++++|.+++.    .+++..+..++.||+.||.|||++   +|+||||||+|||++     .++ .+||+|||++
T Consensus       111 v~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~-----~~~~~~kl~Dfg~a  178 (330)
T 3nsz_A          111 VFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMID-----HEHRKLRLIDWGLA  178 (330)
T ss_dssp             EEECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEE-----TTTTEEEECCCTTC
T ss_pred             EEeccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEc-----CCCCEEEEEeCCCc
Confidence            999999999999983    478899999999999999999999   999999999999998     444 8999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCcccccccc-ccchhhh-HHHHHHH
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEES-EEVDIVL-SDWVISC  720 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~-~~~~~~~-~~~~~~~  720 (788)
                      ........  .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||......... ......+ .......
T Consensus       179 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~  256 (330)
T 3nsz_A          179 EFYHPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY  256 (330)
T ss_dssp             EECCTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHH
T ss_pred             eEcCCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhH
Confidence            87654332  233568999999999876 67899999999999999999999999543221100 0000000 0000000


Q ss_pred             hhccc------ccccccC--------CCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          721 MLSRN------LQVLVSH--------DPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       721 ~~~~~------~~~l~~~--------~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .....      .......        .............+.+++.+||+.||++|||++|++++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          257 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  320 (330)
T ss_dssp             HHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            00000      0000000        00001111235678899999999999999999999873

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=9.2e-37  Score=340.62  Aligned_cols=198  Identities=23%  Similarity=0.342  Sum_probs=169.5

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC------CccccceEeeEEecCCeE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT------HHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l------~hpniv~~~~~~~~~~~~  562 (788)
                      .|.+.++||+|+||+||+|...  .++..||||++... ....+.+.+|+++++.+      +|+||+++++++...+..
T Consensus        98 ry~~~~~LG~G~fg~V~~a~~~--~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           98 RYEVLKVIGKGSFGQVVKAYDH--KVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             TEEEEEEEEESSSEEEEEEEET--TTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             cEEEEEEcccCccEEEEEEEEC--CCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            4677899999999999999886  66789999999764 33445667777777665      678999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCc--EEEee
Q 047157          563 LLVYELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM--AKISD  639 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~--~kL~D  639 (788)
                      ++||||+. ++|.+++.... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.  +||+|
T Consensus       175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~-----~~~~~~vkL~D  245 (429)
T 3kvw_A          175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLK-----QQGRSGIKVID  245 (429)
T ss_dssp             EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEES-----STTSCCEEECC
T ss_pred             EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEc-----cCCCcceEEee
Confidence            99999995 69999987654 4589999999999999999999999   999999999999998     5544  99999


Q ss_pred             cCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCcccc
Q 047157          640 FGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRV  702 (788)
Q Consensus       640 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~  702 (788)
                      ||++......    .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       246 FG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~  304 (429)
T 3kvw_A          246 FGSSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE  304 (429)
T ss_dssp             CTTCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             cccceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence            9999764332    2235789999999999999999999999999999999999999976543

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=5.7e-36  Score=327.28  Aligned_cols=253  Identities=25%  Similarity=0.355  Sum_probs=201.6

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccch--------HHHHHHHHHHHHHhcCC-CccccceEeeEEe
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--------EKTNEEFMTELKIIGRT-HHKNLVRLLGFCS  557 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~  557 (788)
                      ...|.+.+.||+|+||.||+|.+.  .++..||||.+....        ....+.+.+|+.+++++ +||||+++++++.
T Consensus        93 ~~~y~~~~~lg~G~~g~Vy~a~~~--~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  170 (365)
T 2y7j_A           93 YQKYDPKDVIGRGVSSVVRRCVHR--ATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE  170 (365)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhcccceEEecCCCEEEEEEEEC--CCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence            355777799999999999999886  567799999875432        23356788999999998 7999999999999


Q ss_pred             cCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          558 EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       558 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                      .....++||||+++++|.+++... ..+++..+..++.||+.||.|||+.   +|+|+||||+|||++     .++.+||
T Consensus       171 ~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~-----~~~~ikl  241 (365)
T 2y7j_A          171 SSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLD-----DNMQIRL  241 (365)
T ss_dssp             BSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----TTCCEEE
T ss_pred             eCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC-----CCCCEEE
Confidence            999999999999999999999654 5689999999999999999999999   999999999999998     7889999


Q ss_pred             eecCCccccCCCCCcccccccCCccccCcccccC------CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchh
Q 047157          638 SDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN------VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI  711 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~  711 (788)
                      +|||++..+.....  .....||+.|+|||++.+      ..++.++||||||+++|||++|+.||.......       
T Consensus       242 ~DfG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-------  312 (365)
T 2y7j_A          242 SDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL-------  312 (365)
T ss_dssp             CCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-------
T ss_pred             EecCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH-------
Confidence            99999987654322  234678999999999853      368899999999999999999999996542111       


Q ss_pred             hhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          712 VLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       712 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                       ...    ..........      ..........+.+++.+||+.||++|||++|++++
T Consensus       313 -~~~----~i~~~~~~~~------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  360 (365)
T 2y7j_A          313 -MLR----MIMEGQYQFS------SPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH  360 (365)
T ss_dssp             -HHH----HHHHTCCCCC------HHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             -HHH----HHHhCCCCCC------CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence             000    1111111000      00000123567889999999999999999999873

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=5.7e-37  Score=324.05  Aligned_cols=252  Identities=22%  Similarity=0.249  Sum_probs=185.6

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ...|.+.+.||+|+||+||++...  .++..||+|++....  ....+.+.++...++.++||||+++++++.+++..++
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l   83 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHV--PSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI   83 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEec--CCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence            345677899999999999999886  677899999986542  2333445555566888999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          565 VYELMPNGTLSNFLFH---EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      ||||++ ++|.+++..   ....+++..+..++.||+.||.|||++  .+|+||||||+||+++     .++.+||+|||
T Consensus        84 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~-----~~~~~kl~Dfg  155 (290)
T 3fme_A           84 CMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLIN-----ALGQVKMCDFG  155 (290)
T ss_dssp             EEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEEC-----TTCCEEBCCC-
T ss_pred             EEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEEC-----CCCCEEEeecC
Confidence            999997 588887754   456789999999999999999999984  3899999999999998     77899999999


Q ss_pred             CccccCCCCCcccccccCCccccCcccc----cCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHH
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWL----RNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV  717 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~  717 (788)
                      ++........  .....||+.|+|||.+    .+..++.++||||||+++|||++|+.||........      ..    
T Consensus       156 ~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~----  223 (290)
T 3fme_A          156 ISGYLVDDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ------QL----  223 (290)
T ss_dssp             ----------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH------HH----
T ss_pred             Cccccccccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHH------HH----
Confidence            9987644322  2234689999999996    566789999999999999999999999974321110      00    


Q ss_pred             HHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       718 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ..... ...        ...........+.+++.+||+.||++|||++|+++
T Consensus       224 ~~~~~-~~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          224 KQVVE-EPS--------PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             HHHHH-SCC--------CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHhc-cCC--------CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            00111 110        11111123456888999999999999999999987

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=2.8e-36  Score=321.25  Aligned_cols=249  Identities=26%  Similarity=0.302  Sum_probs=195.8

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch----HHHHHHHHHHHHHhcCCCccccceEeeEE--ecCCeE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI----EKTNEEFMTELKIIGRTHHKNLVRLLGFC--SEEDKR  562 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~--~~~~~~  562 (788)
                      .|.+.+.||+|+||.||++...  .++..||+|.+....    ....+.+.+|++++++++||||+++++++  .+....
T Consensus         6 ~y~i~~~lg~G~~g~V~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            6 KYLMGDLLGEGSYGKVKEVLDS--ETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             CBCCCCEEEECSSCEEEEEEBT--TTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ceeEeeEEecCCCeEEEEEEEC--CCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            4677899999999999999875  667799999987543    23457899999999999999999999998  445688


Q ss_pred             EEEEecCCCCCHhHhhhc-cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          563 LLVYELMPNGTLSNFLFH-EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      ++||||++++ |.+++.. ....+++..+..++.||+.||.|||++   +|+||||||+||+++     .++.+||+|||
T Consensus        84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~-----~~~~~kl~dfg  154 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLT-----TGGTLKISALG  154 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----TTCCEEECCCT
T ss_pred             EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEc-----CCCcEEeeccc
Confidence            9999999876 7777654 345789999999999999999999999   999999999999998     78899999999


Q ss_pred             CccccCCCC-CcccccccCCccccCcccccCCC--CCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHH
Q 047157          642 ISKLLNKDQ-TRTDTNMRGTMGYVAPEWLRNVP--VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVI  718 (788)
Q Consensus       642 ~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  718 (788)
                      ++....... ........|++.|+|||.+.+..  .+.++||||||+++|||++|+.||......+.            .
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------------~  222 (305)
T 2wtk_C          155 VAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKL------------F  222 (305)
T ss_dssp             TCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH------------H
T ss_pred             cccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHH------------H
Confidence            998765322 22223456899999999987644  47899999999999999999999975432111            0


Q ss_pred             HHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          719 SCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       719 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .........        .  .......+.+++.+||+.||++|||++|++++
T Consensus       223 ~~i~~~~~~--------~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          223 ENIGKGSYA--------I--PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             HHHHHCCCC--------C--CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             HHHhcCCCC--------C--CCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            111111110        0  01123567789999999999999999999964

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.1e-36  Score=338.12  Aligned_cols=205  Identities=20%  Similarity=0.308  Sum_probs=156.2

Q ss_pred             hcc-cccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEe--cCCeEEEEE
Q 047157          490 KGF-SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCS--EEDKRLLVY  566 (788)
Q Consensus       490 ~~~-~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--~~~~~~lV~  566 (788)
                      |.+ .++||+|+||+||+|..+....+..||||++....  ..+.+.+|++++++++||||+++++++.  .....++||
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~   99 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF   99 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence            444 46899999999999998654567799999997542  2346789999999999999999999994  477899999


Q ss_pred             ecCCCCCHhHhhhcc--------CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEe
Q 047157          567 ELMPNGTLSNFLFHE--------GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS  638 (788)
Q Consensus       567 e~~~~gsL~~~l~~~--------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~  638 (788)
                      ||++ ++|.+++...        ...+++..+..++.||+.||.|||++   +|+||||||+|||+.... ..++.+||+
T Consensus       100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~-~~~~~~kl~  174 (405)
T 3rgf_A          100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEG-PERGRVKIA  174 (405)
T ss_dssp             ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSS-TTTTCEEEC
T ss_pred             eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCC-CCCCcEEEE
Confidence            9996 5888777422        22489999999999999999999999   999999999999994221 167899999


Q ss_pred             ecCCccccCCCCC--cccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccc
Q 047157          639 DFGISKLLNKDQT--RTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSR  701 (788)
Q Consensus       639 Dfg~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~  701 (788)
                      |||++........  .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus       175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  240 (405)
T 3rgf_A          175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  240 (405)
T ss_dssp             CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred             ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCcc
Confidence            9999987654321  22234678999999999877 458999999999999999999999997653

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=3.3e-36  Score=336.73  Aligned_cols=198  Identities=25%  Similarity=0.364  Sum_probs=166.3

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecC-----Ce
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE-----DK  561 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~  561 (788)
                      .|.+.+.||+|+||.||+|...  .++..||||++...  .....+.+.+|++++++++||||+++++++...     ..
T Consensus        27 ~y~~~~~lG~G~~g~V~~a~~~--~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           27 NYIIKHLIGRGSYGYVYLAYDK--NTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET--TTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CEEEEEEEeecCCEEEEEEEEC--CCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            5777899999999999999886  67789999998653  234557899999999999999999999999766     57


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      .++||||++ ++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~-----~~~~~kL~DFG  174 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLN-----QDCSVKVCDFG  174 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC-----TTCCEEECCCT
T ss_pred             EEEEEecCC-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEEC-----CCCCEEEccCC
Confidence            899999986 5999998543 5689999999999999999999999   999999999999998     78899999999


Q ss_pred             CccccCCCCCc---------------------ccccccCCccccCcccc-cCCCCCccCcchhhHHHHHHHHhCCCCCC
Q 047157          642 ISKLLNKDQTR---------------------TDTNMRGTMGYVAPEWL-RNVPVTTKVDVFSFGVMLLEIICGRRHIE  698 (788)
Q Consensus       642 ~a~~~~~~~~~---------------------~~~~~~gt~~y~aPE~~-~~~~~s~k~DVwSlGvil~elltg~~p~~  698 (788)
                      +++........                     ......||+.|+|||++ ....++.++|||||||++|||++|..||.
T Consensus       175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence            99876543211                     22456789999999986 56679999999999999999998655553

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=2.2e-36  Score=326.76  Aligned_cols=273  Identities=21%  Similarity=0.281  Sum_probs=202.9

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccc------cceEeeEEecCCe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKN------LVRLLGFCSEEDK  561 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpn------iv~~~~~~~~~~~  561 (788)
                      ..|.+.+.||+|+||+||+|.... .++..||||.+... ....+.+.+|+++++.++|++      ++++++++.+.+.
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHK-AGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETT-TTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             CceEEEEEEecCCCeEEEEEEecC-CCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            467788999999999999998732 45679999999754 344567889999998887665      9999999999999


Q ss_pred             EEEEEecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCC----------
Q 047157          562 RLLVYELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLD----------  630 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~----------  630 (788)
                      .++||||+ +++|.+++...+ ..+++..+..++.||+.||+|||++   +|+||||||+|||++.....          
T Consensus        92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~  167 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRD  167 (339)
T ss_dssp             EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred             EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccc
Confidence            99999999 899999997654 3678999999999999999999999   99999999999999832100          


Q ss_pred             ----CCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCcccccccc
Q 047157          631 ----TNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEES  706 (788)
Q Consensus       631 ----~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~  706 (788)
                          .++.+||+|||++......    .....||+.|+|||.+.+..++.++||||||+++|||++|+.||......+..
T Consensus       168 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~  243 (339)
T 1z57_A          168 ERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL  243 (339)
T ss_dssp             EEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHH
T ss_pred             cccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence                0568999999999865432    22357899999999999999999999999999999999999999765432211


Q ss_pred             ccchhhh---HHHHHHHhhccccc------------------ccccC-CCCCcccHHHHHHHHHHHhHccCCCCCCCCCH
Q 047157          707 EEVDIVL---SDWVISCMLSRNLQ------------------VLVSH-DPEVLSDLERFERMAMVGLWCNHPDPNLRPSM  764 (788)
Q Consensus       707 ~~~~~~~---~~~~~~~~~~~~~~------------------~l~~~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~  764 (788)
                      .......   ..............                  ..... ...........+.+.+++.+||+.||++|||+
T Consensus       244 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~  323 (339)
T 1z57_A          244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITL  323 (339)
T ss_dssp             HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred             HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCH
Confidence            1000000   00000000000000                  00000 00011123456788999999999999999999


Q ss_pred             HHHHHH
Q 047157          765 KKVIHM  770 (788)
Q Consensus       765 ~evl~~  770 (788)
                      +|++++
T Consensus       324 ~ell~h  329 (339)
T 1z57_A          324 REALKH  329 (339)
T ss_dssp             HHHTTS
T ss_pred             HHHhcC
Confidence            999864

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=8.1e-37  Score=338.02  Aligned_cols=279  Identities=22%  Similarity=0.253  Sum_probs=205.1

Q ss_pred             cCHHHHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC--------ccccce
Q 047157          480 FTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH--------HKNLVR  551 (788)
Q Consensus       480 ~~~~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~--------hpniv~  551 (788)
                      +...++....|.+.++||+|+||+||+|...  .++..||||++... ....+.+.+|++++++++        |+||++
T Consensus        29 ~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~  105 (397)
T 1wak_A           29 VKIGDLFNGRYHVIRKLGWGHFSTVWLSWDI--QGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQ  105 (397)
T ss_dssp             SCTTCEETTTEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCC
T ss_pred             EehhhhcCCeEEEEEEeeecCCeeEEEEEec--CCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeee
Confidence            3334444567888899999999999999876  67789999999754 445677889999999885        888999


Q ss_pred             EeeEEe----cCCeEEEEEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEecc
Q 047157          552 LLGFCS----EEDKRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDL  626 (788)
Q Consensus       552 ~~~~~~----~~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~  626 (788)
                      +++++.    .....++||||+ +++|.+.+... ...+++..+..++.||+.||.|||+++  +|+||||||+|||++.
T Consensus       106 ~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~  182 (397)
T 1wak_A          106 LLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSV  182 (397)
T ss_dssp             EEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECC
T ss_pred             eecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEec
Confidence            999987    566899999999 55666665443 467899999999999999999999852  7999999999999983


Q ss_pred             CC--------------------------------------------CCCCCcEEEeecCCccccCCCCCcccccccCCcc
Q 047157          627 KT--------------------------------------------LDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG  662 (788)
Q Consensus       627 ~~--------------------------------------------~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~  662 (788)
                      .+                                            ......+||+|||++......    .....||+.
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~  258 (397)
T 1wak_A          183 NEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQ  258 (397)
T ss_dssp             CHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGG
T ss_pred             cchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCc
Confidence            21                                            001137999999999876533    233568999


Q ss_pred             ccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh--------ccc---------
Q 047157          663 YVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML--------SRN---------  725 (788)
Q Consensus       663 y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~---------  725 (788)
                      |+|||++.+..++.++|||||||++|||++|+.||......+.......  .........        ...         
T Consensus       259 y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  336 (397)
T 1wak_A          259 YRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDH--IALIIELLGKVPRKLIVAGKYSKEFFTKK  336 (397)
T ss_dssp             GCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHH--HHHHHHHHCSCCHHHHHHCTTGGGTBCTT
T ss_pred             ccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHH--HHHHHHhcCCCChHHhhcccccccccCCc
Confidence            9999999999999999999999999999999999986543322111110  000000000        000         


Q ss_pred             --ccccccCCC---------CCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          726 --LQVLVSHDP---------EVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       726 --~~~l~~~~~---------~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                        +..+....+         ...........+.+|+.+||+.||++|||++|++++
T Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  392 (397)
T 1wak_A          337 GDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH  392 (397)
T ss_dssp             SSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred             cccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence              000000000         011234566789999999999999999999999863

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.6e-36  Score=332.55  Aligned_cols=266  Identities=21%  Similarity=0.240  Sum_probs=191.7

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCC------
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED------  560 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------  560 (788)
                      .|.+.+.||+|+||.||+|...  .++..||||++...  .....+.+.+|+.+++.++||||+++++++...+      
T Consensus        26 ~y~~~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           26 RYQNLKPIGSGAQGIVCAAYDA--ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             heeEeeeeEecCCEEEEEEEEC--CCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            4667789999999999999876  66789999998653  2445578889999999999999999999997655      


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ..++||||++ ++|.+++.   ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+||
T Consensus       104 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~-----~~~~~kl~Df  171 (371)
T 2xrw_A          104 DVYIVMELMD-ANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVK-----SDCTLKILDF  171 (371)
T ss_dssp             EEEEEEECCS-EEHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC-----TTSCEEECCC
T ss_pred             ceEEEEEcCC-CCHHHHHh---hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEc-----CCCCEEEEEe
Confidence            7899999997 47888874   3588999999999999999999999   999999999999998     7889999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchh---------
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI---------  711 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~---------  711 (788)
                      |++.......  ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+.......         
T Consensus       172 g~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  249 (371)
T 2xrw_A          172 GLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF  249 (371)
T ss_dssp             CC------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHH
T ss_pred             eccccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence            9998654322  22345789999999999999999999999999999999999999976543221100000         


Q ss_pred             --hhHHHHHHHhhc-cc-----ccccccC---CCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          712 --VLSDWVISCMLS-RN-----LQVLVSH---DPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       712 --~~~~~~~~~~~~-~~-----~~~l~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                        .+.......... ..     +......   .............+.+|+.+||+.||++|||++|++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          250 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             HTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence              000000000000 00     0000000   00001112335678999999999999999999999974

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=8.4e-37  Score=328.14  Aligned_cols=257  Identities=28%  Similarity=0.371  Sum_probs=197.7

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccch--------HHHHHHHHHHHHHhcCCCccccceEeeEE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--------EKTNEEFMTELKIIGRTHHKNLVRLLGFC  556 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~hpniv~~~~~~  556 (788)
                      .....|.+.+.||+|+||.||+|...  .++..||||.+....        ......+.+|++++++++||||+++++++
T Consensus         7 ~l~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   84 (322)
T 2ycf_A            7 ALRDEYIMSKTLGSGACGEVKLAFER--KTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF   84 (322)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             hhhhceeEeeEEecCCCEEEEEEEEc--CCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEE
Confidence            34567888999999999999999886  667899999986432        12234688999999999999999999998


Q ss_pred             ecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEE
Q 047157          557 SEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAK  636 (788)
Q Consensus       557 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~k  636 (788)
                      ..++ .++||||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++..+  .+..+|
T Consensus        85 ~~~~-~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~--~~~~~k  157 (322)
T 2ycf_A           85 DAED-YYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQE--EDCLIK  157 (322)
T ss_dssp             ESSS-EEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSS--SSCCEE
T ss_pred             cCCc-eEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCC--CCCeEE
Confidence            7665 89999999999999998643 5789999999999999999999999   999999999999998432  345699


Q ss_pred             EeecCCccccCCCCCcccccccCCccccCccccc---CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh
Q 047157          637 ISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL  713 (788)
Q Consensus       637 L~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~  713 (788)
                      |+|||++.......  ......|++.|+|||++.   ...++.++||||||+++|||++|+.||........       +
T Consensus       158 l~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-------~  228 (322)
T 2ycf_A          158 ITDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-------L  228 (322)
T ss_dssp             ECCCTTCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC-------H
T ss_pred             EccCccceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH-------H
Confidence            99999998764322  122356899999999973   56789999999999999999999999975432211       1


Q ss_pred             HHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          714 SDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       714 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ...    ...+.....    +.  ......+.+.+++.+||+.||++|||++|+++
T Consensus       229 ~~~----~~~~~~~~~----~~--~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          229 KDQ----ITSGKYNFI----PE--VWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             HHH----HHHTCCCCC----HH--HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHH----HHhCccccC----ch--hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            010    111110000    00  00122467889999999999999999999985

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=2.6e-36  Score=320.42  Aligned_cols=250  Identities=24%  Similarity=0.318  Sum_probs=201.3

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---------HHHHHHHHHHHHHhcCCC-ccccceEeeEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---------EKTNEEFMTELKIIGRTH-HKNLVRLLGFCSE  558 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---------~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~  558 (788)
                      .|.+.+.||+|+||.||+|...  .++..||||.+....         ....+.+.+|+++++++. ||||+++++++.+
T Consensus        18 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           18 NYEPKEILGRGVSSVVRRCIHK--PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             ccceeeeecCCCceEEEEEEEc--CcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            4667789999999999999886  677899999986432         234567889999999995 9999999999999


Q ss_pred             CCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEe
Q 047157          559 EDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS  638 (788)
Q Consensus       559 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~  638 (788)
                      .+..++||||+++++|.+++... ..+++..+..++.||+.||.|||++   +|+|+||||+||+++     .++.+||+
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~-----~~~~~kl~  166 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLD-----DDMNIKLT  166 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----TTCCEEEC
T ss_pred             CCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEc-----CCCcEEEe
Confidence            99999999999999999999654 5689999999999999999999999   999999999999998     78899999


Q ss_pred             ecCCccccCCCCCcccccccCCccccCccccc------CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh
Q 047157          639 DFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR------NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV  712 (788)
Q Consensus       639 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~  712 (788)
                      |||++........  .....+++.|+|||.+.      ...++.++||||||+++|||++|+.||........       
T Consensus       167 dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-------  237 (298)
T 1phk_A          167 DFGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM-------  237 (298)
T ss_dssp             CCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------
T ss_pred             cccchhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHH-------
Confidence            9999987654322  23356899999999885      45688999999999999999999999965422110       


Q ss_pred             hHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          713 LSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       713 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                           ...........      ...........+.+++.+||+.||++|||+.|+++
T Consensus       238 -----~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          238 -----LRMIMSGNYQF------GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             -----HHHHHHTCCCC------CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             -----HHHHhcCCccc------CcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence                 01111111110      00111123467889999999999999999999986

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=2.6e-36  Score=320.82  Aligned_cols=252  Identities=23%  Similarity=0.340  Sum_probs=192.9

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEec---------
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE---------  558 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---------  558 (788)
                      ..|.+.+.||+|+||.||+|...  .++..||||.+... ....+.+.+|++++++++||||+++++++.+         
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNA--LDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT   82 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred             ccchhhheeccCCcEEEEEEEEc--CCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence            45777899999999999999876  56779999999654 4456789999999999999999999998755         


Q ss_pred             ----CCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCc
Q 047157          559 ----EDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM  634 (788)
Q Consensus       559 ----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~  634 (788)
                          .+..++||||+++++|.+++......+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~-----~~~~  154 (303)
T 1zy4_A           83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFID-----ESRN  154 (303)
T ss_dssp             ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC-----TTSC
T ss_pred             ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEc-----CCCC
Confidence                3578999999999999999987767788899999999999999999999   999999999999998     7889


Q ss_pred             EEEeecCCccccCCCC-------------CcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCcc
Q 047157          635 AKISDFGISKLLNKDQ-------------TRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELS  700 (788)
Q Consensus       635 ~kL~Dfg~a~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~  700 (788)
                      +||+|||++.......             ........|++.|+|||.+.+. .++.++||||||+++|||++   ||...
T Consensus       155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~  231 (303)
T 1zy4_A          155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG  231 (303)
T ss_dssp             EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred             EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc
Confidence            9999999998764321             1122345689999999999764 78999999999999999998   55322


Q ss_pred             ccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          701 RVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       701 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ....          . ..........      .............+.+++.+||+.||++|||++|++++
T Consensus       232 ~~~~----------~-~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  284 (303)
T 1zy4_A          232 MERV----------N-ILKKLRSVSI------EFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS  284 (303)
T ss_dssp             HHHH----------H-HHHHHHSTTC------CCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             hhHH----------H-HHHhcccccc------ccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence            1000          0 0011111100      00011112334567889999999999999999999874

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=2.7e-36  Score=318.61  Aligned_cols=258  Identities=25%  Similarity=0.333  Sum_probs=205.3

Q ss_pred             HHHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCC
Q 047157          483 QELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED  560 (788)
Q Consensus       483 ~~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  560 (788)
                      +......|.+.+.||+|+||.||+|...  .++..||+|.+....  ....+.+.+|++++++++||||+++++++.+.+
T Consensus        17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~--~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   94 (287)
T 2wei_A           17 QGTFAERYNIVCMLGKGSFGEVLKCKDR--ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS   94 (287)
T ss_dssp             THHHHHHEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             HHHHhhcceeeEEEcCCCCEEEEEEEEc--CCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC
Confidence            4455667888999999999999999886  567799999986432  234678899999999999999999999999999


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ..++|+||+++++|.+++... ..+++..++.++.||+.||.|||++   +|+|+||||+||+++..+  .+..+||+||
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~--~~~~~kL~Df  168 (287)
T 2wei_A           95 SFYIVGELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKE--KDCDIKIIDF  168 (287)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSS--TTCCEEECST
T ss_pred             eEEEEEEccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCC--CcccEEEecc
Confidence            999999999999999988654 4689999999999999999999999   999999999999997433  4568999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      |++........  .....+++.|+|||.+.+ .++.++||||||+++|+|++|+.||......+.            ...
T Consensus       169 g~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~------------~~~  233 (287)
T 2wei_A          169 GLSTCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI------------LKR  233 (287)
T ss_dssp             TGGGTBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHH
T ss_pred             CcceeecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHH------------HHH
Confidence            99987644322  123457889999999876 489999999999999999999999976432111            111


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ...+....      ...........+.+++.+||+.||++|||++|+++
T Consensus       234 ~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          234 VETGKYAF------DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             HHHCCCCC------CSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHcCCCCC------CchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            11111110      00001122456888999999999999999999997

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=2e-36  Score=328.91  Aligned_cols=255  Identities=22%  Similarity=0.284  Sum_probs=200.5

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHH-----------------HHHHHHHHHHhcCCCccccce
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKT-----------------NEEFMTELKIIGRTHHKNLVR  551 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~-----------------~~~~~~E~~~l~~l~hpniv~  551 (788)
                      .|.+.+.||+|+||.||+|..    ++..||||.+.......                 .+.+.+|++++++++||||++
T Consensus        32 ~y~~~~~lg~G~~g~V~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~  107 (348)
T 2pml_X           32 DYRIIRTLNQGKFNKIILCEK----DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT  107 (348)
T ss_dssp             TEEEEEEEECCSSCCEEEEEE----TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             ceEEEEEEcCCCCeEEEEEEc----CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence            467789999999999999987    56799999987543221                 178999999999999999999


Q ss_pred             EeeEEecCCeEEEEEecCCCCCHhHh------hhcc-CCCCCHHHHHHHHHHHHHHHHHhhh-ccCCceEecCCCCCcEE
Q 047157          552 LLGFCSEEDKRLLVYELMPNGTLSNF------LFHE-GQRPGWVQRVEIALGVARGLLYLHE-ECETQIIHCDIKPQNVL  623 (788)
Q Consensus       552 ~~~~~~~~~~~~lV~e~~~~gsL~~~------l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIl  623 (788)
                      +++++.+.+..++||||+++++|.++      +... ...+++..++.++.||+.||.|||+ +   +|+||||||+||+
T Consensus       108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil  184 (348)
T 2pml_X          108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL  184 (348)
T ss_dssp             CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred             EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence            99999999999999999999999998      5442 5678999999999999999999998 8   9999999999999


Q ss_pred             eccCCCCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCC-CCCc-cCcchhhHHHHHHHHhCCCCCCccc
Q 047157          624 LDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV-PVTT-KVDVFSFGVMLLEIICGRRHIELSR  701 (788)
Q Consensus       624 l~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~-k~DVwSlGvil~elltg~~p~~~~~  701 (788)
                      ++     .++.+||+|||.+......   ......++..|+|||.+.+. .++. ++||||||+++|||++|+.||....
T Consensus       185 ~~-----~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  256 (348)
T 2pml_X          185 MD-----KNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI  256 (348)
T ss_dssp             EC-----TTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             Ec-----CCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            98     7889999999999876443   23345789999999999877 6666 9999999999999999999997643


Q ss_pred             cccccccchhhhHHHHHHHhhccccccccc------CC---CCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          702 VEEESEEVDIVLSDWVISCMLSRNLQVLVS------HD---PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~---~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ....           ...............      ..   ............+.+++.+||+.||++|||++|+++
T Consensus       257 ~~~~-----------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          257 SLVE-----------LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             CSHH-----------HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             cHHH-----------HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            2110           011111111110000      00   000001223467889999999999999999999987

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=1.1e-36  Score=332.89  Aligned_cols=265  Identities=22%  Similarity=0.281  Sum_probs=182.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecC------C
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE------D  560 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------~  560 (788)
                      .|.+.+.||+|+||.||+|...  .++..||||++...  .....+.+.+|+++++.++||||+++++++...      .
T Consensus        30 ~y~~~~~lG~G~~g~V~~a~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           30 RYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             TEEEEEECC----CCEEEEEET--TTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             ceEEeeEEeecCCeEEEEEEEC--CCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            4667789999999999999876  67789999998653  234567888999999999999999999998654      5


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ..++|+|++ +++|.+++..  ..+++..+..++.||++||.|||++   +|+||||||+|||++     .++.+||+||
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~-----~~~~~kL~DF  176 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVN-----EDCELKILDF  176 (367)
T ss_dssp             CCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC-----TTCCEEECC-
T ss_pred             eEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEEC-----CCCCEEEeec
Confidence            679999999 7899998854  5689999999999999999999999   999999999999998     7889999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhH---HH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS---DW  716 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~---~~  716 (788)
                      |+++.....    .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||......+........+.   .-
T Consensus       177 G~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~  252 (367)
T 2fst_X          177 GLARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE  252 (367)
T ss_dssp             ------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHH
T ss_pred             ccccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence            999865432    234578999999999876 6889999999999999999999999976543221111000000   00


Q ss_pred             HHHHhhcccccccccCCCCCc-ccH-----HHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          717 VISCMLSRNLQVLVSHDPEVL-SDL-----ERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       717 ~~~~~~~~~~~~l~~~~~~~~-~~~-----~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .............+...+... ...     .....+.+|+.+||+.||++|||++|++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             HHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence            000000000000000000000 000     123567899999999999999999999974

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=7.3e-37  Score=336.83  Aligned_cols=264  Identities=21%  Similarity=0.233  Sum_probs=193.7

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEec---------
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE---------  558 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---------  558 (788)
                      ..|.+.+.||+|+||+||+|...  .++..||||++.....    ...+|+++++.++||||+++++++..         
T Consensus         7 ~~y~~~~~lG~G~fg~V~~a~~~--~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~   80 (383)
T 3eb0_A            7 KKYSLGKTLGTGSFGIVCEVFDI--ESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPP   80 (383)
T ss_dssp             TTEEEEEEEECC-CEEEEEEEET--TTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC--------
T ss_pred             ceEEEEEEEEeccCEEEEEEEEC--CCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccccc
Confidence            45777899999999999999886  6778999999865432    23479999999999999999999843         


Q ss_pred             -----------------------------CCeEEEEEecCCCCCHhHhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhh
Q 047157          559 -----------------------------EDKRLLVYELMPNGTLSNFLFH---EGQRPGWVQRVEIALGVARGLLYLHE  606 (788)
Q Consensus       559 -----------------------------~~~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~  606 (788)
                                                   ....++||||++ ++|.+.+..   .+..+++..+..++.||++||.|||+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  159 (383)
T 3eb0_A           81 QPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS  159 (383)
T ss_dssp             -----------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence                                         334889999998 588877753   45678999999999999999999999


Q ss_pred             ccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCC-CCCccCcchhhHH
Q 047157          607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGV  685 (788)
Q Consensus       607 ~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGv  685 (788)
                      +   +|+||||||+|||++.    .++.+||+|||++........  .....+|+.|+|||.+.+. .++.++||||+|+
T Consensus       160 ~---gi~H~Dikp~Nil~~~----~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~  230 (383)
T 3eb0_A          160 L---GICHRDIKPQNLLVNS----KDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGC  230 (383)
T ss_dssp             T---TEECSCCCGGGEEEET----TTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHH
T ss_pred             C---cCccCccCHHHEEEcC----CCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHH
Confidence            9   9999999999999972    467899999999987644332  2335689999999998765 5899999999999


Q ss_pred             HHHHHHhCCCCCCccccccccccchhhh----HHHHHHHhhcccccccccCCCCCc-----ccHHHHHHHHHHHhHccCC
Q 047157          686 MLLEIICGRRHIELSRVEEESEEVDIVL----SDWVISCMLSRNLQVLVSHDPEVL-----SDLERFERMAMVGLWCNHP  756 (788)
Q Consensus       686 il~elltg~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~l~~l~~~cl~~  756 (788)
                      ++|||++|+.||......+........+    .+... .. ........-+.....     ........+.+|+.+||+.
T Consensus       231 il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  308 (383)
T 3eb0_A          231 VFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMI-RM-NPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRY  308 (383)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH-HH-CTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH-Hh-CcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccC
Confidence            9999999999998654322111100000    00000 00 000000000000000     0112345688999999999


Q ss_pred             CCCCCCCHHHHHH
Q 047157          757 DPNLRPSMKKVIH  769 (788)
Q Consensus       757 dP~~RPt~~evl~  769 (788)
                      ||++|||+.|+++
T Consensus       309 dP~~R~t~~e~l~  321 (383)
T 3eb0_A          309 EPDLRINPYEAMA  321 (383)
T ss_dssp             SGGGSCCHHHHHT
T ss_pred             ChhhCCCHHHHhc
Confidence            9999999999985

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=3.6e-37  Score=330.40  Aligned_cols=256  Identities=25%  Similarity=0.361  Sum_probs=197.0

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ..|.+.+.||+|+||.||+|...   .  .+++|.+....  ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        33 ~~~~~~~~lg~G~~g~V~~~~~~---~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv  107 (319)
T 2y4i_B           33 EQLEIGELIGKGRFGQVYHGRWH---G--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII  107 (319)
T ss_dssp             SCEECCCBCCCSSSSEEEEEEES---S--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred             HHeEEeeEeccCCceEEEEEEEc---C--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence            34667799999999999999874   2  48888875432  23345678899999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|.+++...+..+++..++.++.||+.||.|||++   +|+||||||+||+++      ++.+||+|||++..
T Consensus       108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~------~~~~~l~Dfg~~~~  178 (319)
T 2y4i_B          108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD------NGKVVITDFGLFSI  178 (319)
T ss_dssp             CBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC--------CCEECCCSCCC-
T ss_pred             eecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe------CCCEEEeecCCccc
Confidence            999999999999987767789999999999999999999999   999999999999996      35899999999876


Q ss_pred             cCCCC----CcccccccCCccccCcccccC---------CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh
Q 047157          646 LNKDQ----TRTDTNMRGTMGYVAPEWLRN---------VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV  712 (788)
Q Consensus       646 ~~~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~  712 (788)
                      .....    ........|++.|+|||.+..         ..++.++||||||+++|||++|+.||........       
T Consensus       179 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-------  251 (319)
T 2y4i_B          179 SGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI-------  251 (319)
T ss_dssp             ---------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH-------
T ss_pred             cccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-------
Confidence            53211    112223458899999999864         4578899999999999999999999975432211       


Q ss_pred             hHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCC
Q 047157          713 LSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEV  777 (788)
Q Consensus       713 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~  777 (788)
                           .............        .......+.+++.+||+.||++|||+++++++|+.+...
T Consensus       252 -----~~~~~~~~~~~~~--------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          252 -----IWQMGTGMKPNLS--------QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             -----HHHHHTTCCCCCC--------CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred             -----HHHhccCCCCCCC--------cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence                 0111111111110        011234577899999999999999999999999988754

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=6e-36  Score=320.72  Aligned_cols=269  Identities=20%  Similarity=0.262  Sum_probs=193.3

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEe-----------
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCS-----------  557 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----------  557 (788)
                      .|.+.+.||+|+||.||+|...  .++..||+|.+........+.+.+|++++++++||||+++++++.           
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           12 RYMDLKPLGCGGNGLVFSAVDN--DCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TEEEEEECC-----CEEEEEET--TTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             ceeEEEEeccCCCeEEEEEEEC--CCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            4667789999999999999886  667899999987766667788999999999999999999999873           


Q ss_pred             ---cCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCc
Q 047157          558 ---EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM  634 (788)
Q Consensus       558 ---~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~  634 (788)
                         +....++||||++ ++|.+++..  ..+++..+..++.||+.||+|||++   +|+||||||+|||++.    .++.
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~----~~~~  159 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINT----EDLV  159 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEET----TTTE
T ss_pred             cccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcC----CCCe
Confidence               4468899999997 699999853  4688999999999999999999999   9999999999999972    4568


Q ss_pred             EEEeecCCccccCCCCC--cccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchh
Q 047157          635 AKISDFGISKLLNKDQT--RTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI  711 (788)
Q Consensus       635 ~kL~Dfg~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~  711 (788)
                      +||+|||++........  .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+.......
T Consensus       160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  239 (320)
T 2i6l_A          160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILE  239 (320)
T ss_dssp             EEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             EEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            99999999987643221  12233457889999998865 6789999999999999999999999976543221110000


Q ss_pred             hh---HHHHHHHhhcccccccccC---CCCCc---ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          712 VL---SDWVISCMLSRNLQVLVSH---DPEVL---SDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       712 ~~---~~~~~~~~~~~~~~~l~~~---~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ..   .......... .+...+..   .+...   ........+.+++.+||+.||++|||++|++++
T Consensus       240 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          240 SIPVVHEEDRQELLS-VIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH  306 (320)
T ss_dssp             HSCCCCHHHHHHHHT-TSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             hcCCCchhhhhhhhh-cCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence            00   0000000000 00000000   00000   001234678899999999999999999999873

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=2.1e-36  Score=330.86  Aligned_cols=269  Identities=21%  Similarity=0.280  Sum_probs=199.8

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecC-----CeE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE-----DKR  562 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~~  562 (788)
                      .|.+.+.||+|+||.||+|...  .++..||||++.... ....+.+.+|++++++++||||+++++++...     ...
T Consensus        28 ~y~~~~~lG~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           28 RYTNLSYIGEGAYGMVCSAYDN--LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cEEEEEEeecCCCeEEEEEEEC--CCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            4677899999999999999876  677899999986433 44457889999999999999999999998654     468


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||++ ++|.+++..  ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+
T Consensus       106 ~iv~e~~~-~~L~~~l~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~-----~~~~~kl~Dfg~  174 (364)
T 3qyz_A          106 YIVQDLME-TDLYKLLKT--QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLN-----TTCDLKICDFGL  174 (364)
T ss_dssp             EEEEECCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC-----TTCCEEECCCTT
T ss_pred             EEEEcccC-cCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEEC-----CCCCEEEEeCcc
Confidence            99999997 599998854  3689999999999999999999999   999999999999998     788999999999


Q ss_pred             ccccCCCCCc--ccccccCCccccCccccc-CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhH---HH
Q 047157          643 SKLLNKDQTR--TDTNMRGTMGYVAPEWLR-NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS---DW  716 (788)
Q Consensus       643 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~---~~  716 (788)
                      +.........  ......||+.|+|||++. ...++.++||||||+++|||++|+.||......+........+.   ..
T Consensus       175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  254 (364)
T 3qyz_A          175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE  254 (364)
T ss_dssp             CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHH
T ss_pred             eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence            9876543222  123457899999999865 44589999999999999999999999976543322111100000   00


Q ss_pred             HHHHhhcccccccccCCC-CCccc-----HHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          717 VISCMLSRNLQVLVSHDP-EVLSD-----LERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       717 ~~~~~~~~~~~~l~~~~~-~~~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .................+ .....     ......+.+++.+||+.||++|||++|++++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  314 (364)
T ss_dssp             HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            000000000000000000 00000     1123568899999999999999999999973

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.7e-36  Score=326.27  Aligned_cols=249  Identities=25%  Similarity=0.365  Sum_probs=191.8

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEec------CCe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSE------EDK  561 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~------~~~  561 (788)
                      .|.+.+.||+|+||.||+|...  .++..||||.+.... ...+.+.+|+.+++++ +||||+++++++..      .+.
T Consensus        25 ~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~  101 (326)
T 2x7f_A           25 IFELVELVGNGTYGQVYKGRHV--KTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ  101 (326)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred             cEEEEEEeccCCCEEEEEEEEC--CCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence            4566799999999999999886  567799999986542 3346788999999998 79999999999976      568


Q ss_pred             EEEEEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          562 RLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      .++||||+++++|.+++... ...+++..+..++.||+.||.|||++   +|+|+||||+||+++     .++.+||+||
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~-----~~~~~kl~Df  173 (326)
T 2x7f_A          102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLT-----ENAEVKLVDF  173 (326)
T ss_dssp             EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEC-----TTCCEEECCC
T ss_pred             EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEc-----CCCCEEEeeC
Confidence            89999999999999999754 35688999999999999999999999   999999999999998     7889999999


Q ss_pred             CCccccCCCCCcccccccCCccccCccccc-----CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLR-----NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSD  715 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~  715 (788)
                      |++........ ......|++.|+|||++.     +..++.++||||||+++|+|++|+.||........          
T Consensus       174 g~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----------  242 (326)
T 2x7f_A          174 GVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA----------  242 (326)
T ss_dssp             TTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH----------
T ss_pred             cCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH----------
Confidence            99987643221 122356899999999986     56789999999999999999999999965422110          


Q ss_pred             HHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          716 WVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       716 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                       .. .........+        ........+.+++.+||+.||++|||++|+++
T Consensus       243 -~~-~~~~~~~~~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          243 -LF-LIPRNPAPRL--------KSKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             -HH-HHHHSCCCCC--------SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             -HH-HhhcCccccC--------CccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence             00 0111111111        01122456788999999999999999999987

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=1e-36  Score=339.43  Aligned_cols=265  Identities=26%  Similarity=0.256  Sum_probs=192.0

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecC------CeE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE------DKR  562 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------~~~  562 (788)
                      .|.+.++||+|+||.||+|.+.  .++..||||++.....    ...+|++++++++||||+++++++...      ...
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~--~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~  128 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLC--DSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL  128 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEEC--CCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence            3566789999999999999886  5677999999865422    234799999999999999999988432      236


Q ss_pred             EEEEecCCCCCHhHhhh---ccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEee
Q 047157          563 LLVYELMPNGTLSNFLF---HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD  639 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~D  639 (788)
                      ++||||+++ +|.+.+.   .....+++..+..++.||++||.|||++   +|+||||||+|||++.    +...+||+|
T Consensus       129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~----~~~~~kl~D  200 (420)
T 1j1b_A          129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDP----DTAVLKLCD  200 (420)
T ss_dssp             EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEET----TTTEEEECC
T ss_pred             Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeC----CCCeEEecc
Confidence            799999975 6666554   3456789999999999999999999999   9999999999999982    335789999


Q ss_pred             cCCccccCCCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHH---
Q 047157          640 FGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSD---  715 (788)
Q Consensus       640 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~---  715 (788)
                      ||+++.+.....  .....+|+.|+|||++.+. .++.++|||||||++|||++|+.||......+........+..   
T Consensus       201 FG~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~  278 (420)
T 1j1b_A          201 FGSAKQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR  278 (420)
T ss_dssp             CTTCEECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCH
T ss_pred             chhhhhcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence            999987644322  2335789999999998764 7999999999999999999999999865432211110000000   


Q ss_pred             HHHHHhhcccccccccCCCCCc-----ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          716 WVISCMLSRNLQVLVSHDPEVL-----SDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       716 ~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      -.+... ........-+.....     .......++.+|+.+||+.||++|||+.|++++
T Consensus       279 ~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          279 EQIREM-NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             HHHHHH-CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHhh-ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence            000000 111111100000000     011224678899999999999999999999863

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=1.2e-35  Score=326.95  Aligned_cols=202  Identities=26%  Similarity=0.361  Sum_probs=170.2

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC-cc-----ccceEeeEEecCCe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HK-----NLVRLLGFCSEEDK  561 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-hp-----niv~~~~~~~~~~~  561 (788)
                      ..|.+.+.||+|+||+||+|...  .++..||||++... ....+++..|+++++.++ |+     +|+++++++...+.
T Consensus        54 ~~y~~~~~lG~G~~g~V~~~~~~--~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  130 (382)
T 2vx3_A           54 DRYEIDSLIGKGSFGQVVKAYDR--VEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH  130 (382)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEET--TTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred             eeEEEEEEEeecCCEEEEEEEEc--CCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence            45677899999999999999886  66789999999754 334566778888887774 44     59999999999999


Q ss_pred             EEEEEecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          562 RLLVYELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      .++||||++ ++|.+++.... ..+++..+..++.||+.||.|||.+ ..+|+||||||+|||++..   .++.+||+||
T Consensus       131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~---~~~~~kL~DF  205 (382)
T 2vx3_A          131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNP---KRSAIKIVDF  205 (382)
T ss_dssp             EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESST---TSCCEEECCC
T ss_pred             eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecC---CCCcEEEEec
Confidence            999999996 59999997654 5689999999999999999999952 2389999999999999521   4678999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccc
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSR  701 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~  701 (788)
                      |++......    .....+|+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       206 G~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  262 (382)
T 2vx3_A          206 GSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN  262 (382)
T ss_dssp             TTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            999876432    223578999999999999999999999999999999999999998654

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=7.1e-36  Score=325.12  Aligned_cols=271  Identities=20%  Similarity=0.262  Sum_probs=200.7

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccc------cceEeeEEecCC
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKN------LVRLLGFCSEED  560 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpn------iv~~~~~~~~~~  560 (788)
                      ...|.+.+.||+|+||+||+|.... .++..||+|.+... ....+.+.+|++++++++|++      ++.+++++...+
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~   95 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHA-RGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG   95 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETT-TTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred             cccEEEEEEeeccCCeEEEEEEecC-CCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence            3467788999999999999998752 23368999999754 345567889999999987766      899999999999


Q ss_pred             eEEEEEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCC----------
Q 047157          561 KRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL----------  629 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~----------  629 (788)
                      ..++||||+ +++|.+++... ...+++..+..++.||+.||.|||++   +|+||||||+|||++....          
T Consensus        96 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~  171 (355)
T 2eu9_A           96 HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSC  171 (355)
T ss_dssp             EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred             eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccc
Confidence            999999999 66777776554 35689999999999999999999999   9999999999999942210          


Q ss_pred             ----CCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccc
Q 047157          630 ----DTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEE  705 (788)
Q Consensus       630 ----~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~  705 (788)
                          ..++.+||+|||++.......    ....||+.|+|||++.+..++.++||||||+++|||++|+.||......+.
T Consensus       172 ~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  247 (355)
T 2eu9_A          172 EEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH  247 (355)
T ss_dssp             CEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             cccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                157889999999998644322    335789999999999999999999999999999999999999976533221


Q ss_pred             cccchhhh---HHHHHHHhhcccccccccC---------------------CCCCcccHHHHHHHHHHHhHccCCCCCCC
Q 047157          706 SEEVDIVL---SDWVISCMLSRNLQVLVSH---------------------DPEVLSDLERFERMAMVGLWCNHPDPNLR  761 (788)
Q Consensus       706 ~~~~~~~~---~~~~~~~~~~~~~~~l~~~---------------------~~~~~~~~~~~~~l~~l~~~cl~~dP~~R  761 (788)
                      ........   ...........  ......                     .............+.+|+.+||+.||++|
T Consensus       248 ~~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R  325 (355)
T 2eu9_A          248 LVMMEKILGPIPSHMIHRTRKQ--KYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR  325 (355)
T ss_dssp             HHHHHHHHCCCCHHHHHHCSCG--GGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred             HHHHHHHcCCCcHHHhhhccch--hhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence            11000000   00000000000  000000                     00011122445678899999999999999


Q ss_pred             CCHHHHHH
Q 047157          762 PSMKKVIH  769 (788)
Q Consensus       762 Pt~~evl~  769 (788)
                      ||++|+++
T Consensus       326 pt~~e~l~  333 (355)
T 2eu9_A          326 ITLAEALL  333 (355)
T ss_dssp             CCHHHHTT
T ss_pred             cCHHHHhc
Confidence            99999985

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=1.1e-36  Score=332.86  Aligned_cols=268  Identities=21%  Similarity=0.238  Sum_probs=191.7

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch-----------HHHHHHHHHHHHHhcCCCccccceEeeEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-----------EKTNEEFMTELKIIGRTHHKNLVRLLGFC  556 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-----------~~~~~~~~~E~~~l~~l~hpniv~~~~~~  556 (788)
                      ..|.+.+.||+|+||.||+|...   .+..||||++....           ....+.+.+|++++++++||||+++++++
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   98 (362)
T 3pg1_A           22 SPYTVQRFISSGSYGAVCAGVDS---EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIF   98 (362)
T ss_dssp             CSCEEEEEEEEETTEEEEEEECT---TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred             cceEEeEEeccCCCEEEEEEECC---CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeE
Confidence            34556799999999999999874   47799999885422           22347899999999999999999999998


Q ss_pred             ec-----CCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCC
Q 047157          557 SE-----EDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDT  631 (788)
Q Consensus       557 ~~-----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~  631 (788)
                      ..     ....++||||++ ++|.+++......+++..+..++.||+.||.|||++   +|+||||||+|||++     .
T Consensus        99 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~-----~  169 (362)
T 3pg1_A           99 VHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLA-----D  169 (362)
T ss_dssp             EECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC-----T
T ss_pred             EeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEc-----C
Confidence            43     346899999997 689998877777899999999999999999999999   999999999999998     7


Q ss_pred             CCcEEEeecCCccccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccch
Q 047157          632 NYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVD  710 (788)
Q Consensus       632 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~  710 (788)
                      ++.+||+|||++........  .....+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||......+......
T Consensus       170 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~  247 (362)
T 3pg1_A          170 NNDITICDFNLAREDTADAN--KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV  247 (362)
T ss_dssp             TCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CCCEEEEecCcccccccccc--cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            88999999999985443222  233568899999999876 678999999999999999999999997654322111000


Q ss_pred             hhh----HHHHHHHhhcccc----cccccCCCCCc---ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          711 IVL----SDWVISCMLSRNL----QVLVSHDPEVL---SDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       711 ~~~----~~~~~~~~~~~~~----~~l~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      ...    .... ........    .......+...   ........+.+++.+||+.||++|||++|++++
T Consensus       248 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          248 EVVGTPKIEDV-VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             HHHCCCCHHHH-HHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHcCCCChHHh-hhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence            000    0000 00000000    00000000000   011224568899999999999999999999974

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=6.5e-36  Score=323.13  Aligned_cols=262  Identities=23%  Similarity=0.263  Sum_probs=175.6

Q ss_pred             hhccc-ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEec----CCeEE
Q 047157          489 TKGFS-KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE----EDKRL  563 (788)
Q Consensus       489 t~~~~-~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----~~~~~  563 (788)
                      .|.+. ++||+|+||+||+|...  .++..||||++.... ...+++   ...++.++||||+++++++..    ....+
T Consensus        29 ~y~i~~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~-~~~~e~---~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~  102 (336)
T 3fhr_A           29 DYQLSKQVLGLGVNGKVLECFHR--RTGQKCALKLLYDSP-KARQEV---DHHWQASGGPHIVCILDVYENMHHGKRCLL  102 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEESSH-HHHHHH---HHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             eeEecceeeeeCCCeEEEEEEEC--CCCCEEEEEEecCcH-HHHHHH---HHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence            35553 57999999999999886  667799999986542 222222   233456699999999999876    45689


Q ss_pred             EEEecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          564 LVYELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      +||||+++++|.+++.... ..+++..++.++.||+.||.|||++   +|+||||||+|||++..+  .++.+||+|||+
T Consensus       103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~--~~~~~kl~Dfg~  177 (336)
T 3fhr_A          103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKE--KDAVLKLTDFGF  177 (336)
T ss_dssp             EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSS--TTCCEEECCCTT
T ss_pred             EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecC--CCceEEEecccc
Confidence            9999999999999997654 4689999999999999999999999   999999999999998433  456799999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      +.......   .....+|+.|+|||.+.+..++.++||||||+++|+|++|+.||.............        ....
T Consensus       178 ~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--------~~~~  246 (336)
T 3fhr_A          178 AKETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMK--------RRIR  246 (336)
T ss_dssp             CEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------
T ss_pred             ceeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHH--------Hhhh
Confidence            98654322   223567999999999998899999999999999999999999997543222111000        0000


Q ss_pred             cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH--HhhcCcCCC
Q 047157          723 SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH--MLEGTLEVG  778 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~--~L~~~~~~~  778 (788)
                      ....      .............+.+++.+||+.||++|||++|+++  .+.+....+
T Consensus       247 ~~~~------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~  298 (336)
T 3fhr_A          247 LGQY------GFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVP  298 (336)
T ss_dssp             ----------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGGSC
T ss_pred             cccc------ccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccccCC
Confidence            0000      0000001123456788999999999999999999997  445443333

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=1.4e-35  Score=325.33  Aligned_cols=279  Identities=21%  Similarity=0.282  Sum_probs=203.9

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC-----------ccccceEeeE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-----------HKNLVRLLGF  555 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----------hpniv~~~~~  555 (788)
                      ...|.+.+.||+|+||+||+|...  .++..||||.+... ....+.+.+|++++++++           ||||++++++
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~   94 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDM--VNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH   94 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEec--CCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence            456778899999999999999876  66789999999754 334567888999988876           8999999999


Q ss_pred             EecCC----eEEEEEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCC-
Q 047157          556 CSEED----KRLLVYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL-  629 (788)
Q Consensus       556 ~~~~~----~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~-  629 (788)
                      +...+    ..++|||++ +++|.+++... ...+++..+..++.||+.||.|||++  .+|+||||||+|||++..+. 
T Consensus        95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~--~~ivH~Dikp~NIll~~~~~~  171 (373)
T 1q8y_A           95 FNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDSP  171 (373)
T ss_dssp             EEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEETT
T ss_pred             hhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChHHeEEeccCCC
Confidence            87654    789999999 89999999764 34589999999999999999999984  28999999999999963221 


Q ss_pred             CCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccc
Q 047157          630 DTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEV  709 (788)
Q Consensus       630 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~  709 (788)
                      ...+.+||+|||++......    .....+|+.|+|||++.+..++.++||||||+++|||++|+.||............
T Consensus       172 ~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~  247 (373)
T 1q8y_A          172 ENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD  247 (373)
T ss_dssp             TTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred             cCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence            14558999999999876432    22346899999999999999999999999999999999999999865422211111


Q ss_pred             hhhhHHHHHHHhh------------------cc-cccccccCC---------CCCcccHHHHHHHHHHHhHccCCCCCCC
Q 047157          710 DIVLSDWVISCML------------------SR-NLQVLVSHD---------PEVLSDLERFERMAMVGLWCNHPDPNLR  761 (788)
Q Consensus       710 ~~~~~~~~~~~~~------------------~~-~~~~l~~~~---------~~~~~~~~~~~~l~~l~~~cl~~dP~~R  761 (788)
                      . .+.... ....                  .. .........         ..........+.+.+|+.+||+.||++|
T Consensus       248 ~-~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  325 (373)
T 1q8y_A          248 D-HIAQII-ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKR  325 (373)
T ss_dssp             H-HHHHHH-HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTC
T ss_pred             H-HHHHHH-HhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCcccc
Confidence            0 000000 0000                  00 000000000         0011234567789999999999999999


Q ss_pred             CCHHHHHH--HhhcCcCC
Q 047157          762 PSMKKVIH--MLEGTLEV  777 (788)
Q Consensus       762 Pt~~evl~--~L~~~~~~  777 (788)
                      ||++|+++  .+.+....
T Consensus       326 pt~~ell~hp~f~~~~~~  343 (373)
T 1q8y_A          326 ADAGGLVNHPWLKDTLGM  343 (373)
T ss_dssp             BCHHHHHTCGGGTTCTTC
T ss_pred             CCHHHHhhChhhhcccCc
Confidence            99999997  45554443

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=2.9e-35  Score=322.54  Aligned_cols=264  Identities=20%  Similarity=0.262  Sum_probs=194.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeE----
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKR----  562 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~----  562 (788)
                      .|.+.+.||+|+||+||+|...  .++..||||++...  .....+.+.+|+.++++++||||+++++++...+..    
T Consensus        43 ~y~~~~~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           43 TYVSPTHVGSGAYGSVCSAIDK--RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cEEEEeEEecCCCeEEEEEEEC--CCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            4666789999999999999886  67789999998653  244467889999999999999999999999877655    


Q ss_pred             --EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          563 --LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       563 --~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                        ++||||+. ++|.+++.   ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+||
T Consensus       121 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~-----~~~~~kL~Df  188 (371)
T 4exu_A          121 DFYLVMPFMQ-TDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVN-----EDCELKILDF  188 (371)
T ss_dssp             CCEEEEECCC-EEHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC-----TTCCEEECST
T ss_pred             eEEEEEcccc-ccHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEEC-----CCCCEEEEec
Confidence              99999997 68888773   4489999999999999999999999   999999999999998     7889999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh---HHH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL---SDW  716 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~  716 (788)
                      |++......    .....+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||......+.........   ...
T Consensus       189 g~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  264 (371)
T 4exu_A          189 GLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE  264 (371)
T ss_dssp             TCC------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHH
T ss_pred             CcccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHH
Confidence            999865432    233568999999999877 789999999999999999999999997653222111000000   000


Q ss_pred             HHHHhhccc----ccccccCCCCCcc--cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          717 VISCMLSRN----LQVLVSHDPEVLS--DLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       717 ~~~~~~~~~----~~~l~~~~~~~~~--~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .........    ...+.........  .......+.+|+.+||+.||++|||++|++++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          265 FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             HHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence            000000000    0000000000000  01224678899999999999999999999875

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=1.3e-35  Score=324.02  Aligned_cols=276  Identities=21%  Similarity=0.238  Sum_probs=187.2

Q ss_pred             HHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCe----
Q 047157          486 QEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDK----  561 (788)
Q Consensus       486 ~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~----  561 (788)
                      ....|.+.+.||+|+||+||+|...  .++..||||++.... .....+.+|++.+..++||||+++++++.....    
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~   97 (360)
T 3e3p_A           21 EMDRFQVERMAGQGTFGTVQLGKEK--STGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRR   97 (360)
T ss_dssp             HHTTEEEC----------CEEEEET--TTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTT
T ss_pred             hccceEEEEEEecCCCeEEEEEEEC--CCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccc
Confidence            3345777899999999999999886  567799999886542 233456678888888999999999999865333    


Q ss_pred             ---EEEEEecCCCCCHhHhhh---ccCCCCCHHHHHHHHHHHHHHHHHhh--hccCCceEecCCCCCcEEeccCCCCCCC
Q 047157          562 ---RLLVYELMPNGTLSNFLF---HEGQRPGWVQRVEIALGVARGLLYLH--EECETQIIHCDIKPQNVLLDLKTLDTNY  633 (788)
Q Consensus       562 ---~~lV~e~~~~gsL~~~l~---~~~~~~~~~~~~~i~~qi~~aL~~LH--~~~~~~ivH~dlkp~NIll~~~~~~~~~  633 (788)
                         .++||||+++ +|.+.+.   .....+++..+..++.||+.||.|||  ++   +|+||||||+|||++.    .++
T Consensus        98 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~----~~~  169 (360)
T 3e3p_A           98 DIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNE----ADG  169 (360)
T ss_dssp             CEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEET----TTT
T ss_pred             ceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeC----CCC
Confidence               7899999976 5544443   24567889999999999999999999  77   9999999999999981    278


Q ss_pred             cEEEeecCCccccCCCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh
Q 047157          634 MAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV  712 (788)
Q Consensus       634 ~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~  712 (788)
                      .+||+|||++........  .....||+.|+|||++.+. .++.++||||||+++|||++|+.||...............
T Consensus       170 ~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~  247 (360)
T 3e3p_A          170 TLKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV  247 (360)
T ss_dssp             EEEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             cEEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHH
Confidence            999999999987654332  2345689999999998654 4899999999999999999999999765432211110000


Q ss_pred             h---HHHHHHHhhcccc-cccccCCCC------CcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--hhcC
Q 047157          713 L---SDWVISCMLSRNL-QVLVSHDPE------VLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM--LEGT  774 (788)
Q Consensus       713 ~---~~~~~~~~~~~~~-~~l~~~~~~------~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~~  774 (788)
                      .   ............. .........      ..........+.+|+.+||+.||++|||+.|++++  +++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  321 (360)
T 3e3p_A          248 LGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDEL  321 (360)
T ss_dssp             HCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             cCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcccccc
Confidence            0   0000000000000 000000000      00011235678999999999999999999999974  4444

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=8.2e-36  Score=329.37  Aligned_cols=269  Identities=24%  Similarity=0.239  Sum_probs=191.8

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCC------eE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED------KR  562 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------~~  562 (788)
                      .|.+.++||+|+||+||+|.+.  .++ .+|+|++.....    ...+|+++++.++||||+++++++....      ..
T Consensus        41 ~Y~~~~~lG~G~~g~V~~a~~~--~~~-~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~  113 (394)
T 4e7w_A           41 AYTNCKVIGNGSFGVVFQAKLV--ESD-EVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL  113 (394)
T ss_dssp             EEEEEEEEEEETTEEEEEEEET--TTE-EEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred             eEEEeEEEeeCCCeEEEEEEEC--CCC-eEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence            4677899999999999999885  344 588888754322    2236999999999999999999985433      37


Q ss_pred             EEEEecCCCCCHhHhhh--ccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          563 LLVYELMPNGTLSNFLF--HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~--~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ++||||++++.+.....  .....+++..+..++.||++||+|||++   +|+||||||+|||++.    .++.+||+||
T Consensus       114 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~----~~~~~kL~DF  186 (394)
T 4e7w_A          114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDP----PSGVLKLIDF  186 (394)
T ss_dssp             EEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEET----TTTEEEECCC
T ss_pred             EEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcC----CCCcEEEeeC
Confidence            89999998754443332  2356789999999999999999999999   9999999999999972    4678999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhH---HH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS---DW  716 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~---~~  716 (788)
                      |+++.......  .....+|+.|+|||++.+. .++.++|||||||++|||++|+.||......+........+.   ..
T Consensus       187 G~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~  264 (394)
T 4e7w_A          187 GSAKILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSRE  264 (394)
T ss_dssp             TTCEECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred             CCcccccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence            99987644332  2345689999999998664 589999999999999999999999986543221111000000   00


Q ss_pred             HHHHhhcccccccccCCCCCc-----ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--hhcC
Q 047157          717 VISCMLSRNLQVLVSHDPEVL-----SDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM--LEGT  774 (788)
Q Consensus       717 ~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~~  774 (788)
                      ...... .......-+.....     ........+.+|+.+||+.||++|||+.|++++  ++++
T Consensus       265 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (394)
T 4e7w_A          265 QIKTMN-PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL  328 (394)
T ss_dssp             HHHHHC-GGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred             HHHhhC-hhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence            000000 00000000000000     011134578899999999999999999999975  4444

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=2.6e-35  Score=320.76  Aligned_cols=261  Identities=20%  Similarity=0.248  Sum_probs=197.0

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecC-----CeE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE-----DKR  562 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~~  562 (788)
                      .|.+.+.||+|+||.||+|...  .++..||||.+... .......+.+|++++++++||||+++++++...     ...
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           12 DFQLKSLLGEGAYGVVCSATHK--PTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ceEEeeEEcCCCCeEEEEEEEC--CCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            4667799999999999999886  66789999998643 244556788999999999999999999987654     678


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||+. ++|.+++..  ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+
T Consensus        90 ~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~-----~~~~~kl~Dfg~  158 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLIN-----SNCDLKVCDFGL  158 (353)
T ss_dssp             EEEECCCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC-----TTCCEEECCCTT
T ss_pred             EEEEeccC-ccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEc-----CCCcEEEEeccc
Confidence            99999996 689998865  4689999999999999999999999   999999999999998     788999999999


Q ss_pred             ccccCCCCCc---------ccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh
Q 047157          643 SKLLNKDQTR---------TDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV  712 (788)
Q Consensus       643 a~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~  712 (788)
                      +.........         ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||..........     
T Consensus       159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-----  233 (353)
T 2b9h_A          159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL-----  233 (353)
T ss_dssp             CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-----
T ss_pred             ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH-----
Confidence            9876532211         1223568999999998754 778999999999999999999999997653221100     


Q ss_pred             hHHHHHHHhhccc------------ccccccCCCCCc-c-----cHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          713 LSDWVISCMLSRN------------LQVLVSHDPEVL-S-----DLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       713 ~~~~~~~~~~~~~------------~~~l~~~~~~~~-~-----~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                         ..........            ....+...+... .     .......+.+++.+||+.||++|||++|++++
T Consensus       234 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (353)
T 2b9h_A          234 ---LIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH  306 (353)
T ss_dssp             ---HHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ---HHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence               0000000000            000000000000 0     01234567899999999999999999999973

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=1.6e-35  Score=322.53  Aligned_cols=263  Identities=21%  Similarity=0.276  Sum_probs=194.3

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCe-----
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDK-----  561 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~-----  561 (788)
                      .|.+.+.||+|+||.||+|...  .++..||||.+...  .....+.+.+|+.++++++||||+++++++.....     
T Consensus        25 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           25 TYVSPTHVGSGAYGSVCSAIDK--RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             eEEEeeeEecCCCeEEEEEEEC--CCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            4666789999999999999886  67789999998653  23445788999999999999999999999987654     


Q ss_pred             -EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          562 -RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       562 -~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                       .++||||+. ++|.+++.   ..+++..+..++.||+.||.|||++   +|+||||||+||+++     .++.+||+||
T Consensus       103 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~-----~~~~~kl~Df  170 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMG---LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVN-----EDCELKILDF  170 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEEC-----TTCCEEECST
T ss_pred             eEEEEecccc-CCHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeEC-----CCCcEEEeec
Confidence             499999997 68888773   3589999999999999999999999   999999999999998     7889999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh----HH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL----SD  715 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~----~~  715 (788)
                      |++......    .....+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||......+.........    ..
T Consensus       171 g~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  246 (353)
T 3coi_A          171 GLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE  246 (353)
T ss_dssp             TCTTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHH
T ss_pred             ccccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence            999865432    223568999999999876 678999999999999999999999997654321110000000    00


Q ss_pred             HHHHHhhccc----ccccccC-CCCC-cccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          716 WVISCMLSRN----LQVLVSH-DPEV-LSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       716 ~~~~~~~~~~----~~~l~~~-~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      + ........    +..+... .... .........+.+++.+||+.||++|||++|++++
T Consensus       247 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          247 F-VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             H-HTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             H-HHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            0 00000000    0000000 0000 0011235678899999999999999999999864

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=2.7e-35  Score=317.05  Aligned_cols=250  Identities=26%  Similarity=0.338  Sum_probs=176.0

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHH-HhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELK-IIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .|.+.+.||+|+||.||+|...  .++..||||.+.... .....++..|+. +++.++||||+++++++.+.+..++||
T Consensus        23 ~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           23 DLKDLGEIGRGAYGSVNKMVHK--PSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SEEC-CEEEECSSEEEEEEEET--TTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhhehheeccCCCEEEEEEEEc--CCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            3556789999999999999886  567899999986542 334455666666 778889999999999999999999999


Q ss_pred             ecCCCCCHhHhhhc----cCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          567 ELMPNGTLSNFLFH----EGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       567 e~~~~gsL~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ||+++ +|.+++..    ....+++..+..++.|++.||.|||+.  .+|+||||||+|||++     .++.+||+|||+
T Consensus       101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~-----~~~~~kl~Dfg~  172 (327)
T 3aln_A          101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLD-----RSGNIKLCDFGI  172 (327)
T ss_dssp             CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEE-----TTTEEEECCCSS
T ss_pred             eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEc-----CCCCEEEccCCC
Confidence            99975 88877753    256789999999999999999999984  3899999999999998     788999999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccc----cCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHH
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWL----RNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVI  718 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  718 (788)
                      +........  .....|++.|+|||.+    .+..++.++||||||+++|||++|+.||.........            
T Consensus       173 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~------------  238 (327)
T 3aln_A          173 SGQLVDSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ------------  238 (327)
T ss_dssp             SCC--------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------------
T ss_pred             ceecccccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH------------
Confidence            987643322  2234689999999998    4667899999999999999999999999753211000            


Q ss_pred             HHhhcccccccccCC-C--CCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          719 SCMLSRNLQVLVSHD-P--EVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       719 ~~~~~~~~~~l~~~~-~--~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                             +....... +  ...........+.+++.+||+.||++|||+.||++
T Consensus       239 -------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          239 -------LTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             --------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             -------HHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence                   00011100 0  00011123457888999999999999999999975

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=6.8e-36  Score=321.51  Aligned_cols=263  Identities=22%  Similarity=0.287  Sum_probs=196.4

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchH--HHHHHHHHHHHHhcCC---CccccceEeeEEe-----
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE--KTNEEFMTELKIIGRT---HHKNLVRLLGFCS-----  557 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~E~~~l~~l---~hpniv~~~~~~~-----  557 (788)
                      ..|.+.+.||+|+||.||+|.... .++..||+|.+.....  .....+.+|+.+++.+   +||||+++++++.     
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~   89 (326)
T 1blx_A           11 QQYECVAEIGEGAYGKVFKARDLK-NGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   89 (326)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT-TTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             hceeeeeeecccccEEEEEEEecC-CCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence            346778999999999999998742 3567899998864321  1223456777776655   8999999999987     


Q ss_pred             cCCeEEEEEecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEE
Q 047157          558 EEDKRLLVYELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAK  636 (788)
Q Consensus       558 ~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~k  636 (788)
                      .....++||||++ ++|.+++.... ..+++..+..++.||+.||.|||++   +|+||||||+||+++     .++.+|
T Consensus        90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~-----~~~~~k  160 (326)
T 1blx_A           90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVT-----SSGQIK  160 (326)
T ss_dssp             SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC-----TTCCEE
T ss_pred             CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEc-----CCCCEE
Confidence            5668899999997 69999997653 4589999999999999999999999   999999999999998     788999


Q ss_pred             EeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHH
Q 047157          637 ISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDW  716 (788)
Q Consensus       637 L~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~  716 (788)
                      |+|||++.......  ......+++.|+|||.+.+..++.++||||||+++|||++|+.||.........        ..
T Consensus       161 l~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--------~~  230 (326)
T 1blx_A          161 LADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL--------GK  230 (326)
T ss_dssp             ECSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH--------HH
T ss_pred             EecCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHH--------HH
Confidence            99999998654322  223457899999999999999999999999999999999999999765322111        00


Q ss_pred             HHHHhhc---ccccc-------cccC---CCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          717 VISCMLS---RNLQV-------LVSH---DPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       717 ~~~~~~~---~~~~~-------l~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .......   .....       ....   .+.........+.+.+++.+||+.||++|||+.|++++
T Consensus       231 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  297 (326)
T 1blx_A          231 ILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  297 (326)
T ss_dssp             HHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            1110000   00000       0000   00000011234567889999999999999999999963

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=1.9e-35  Score=316.20  Aligned_cols=250  Identities=22%  Similarity=0.331  Sum_probs=190.8

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCC--ccccceEeeEEecCCeEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTH--HKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~~~~  563 (788)
                      ..|.+.+.||+|+||.||++...   .+..||||.+...  .....+.+.+|++++.+++  ||||+++++++.+.+..+
T Consensus        28 ~~y~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~  104 (313)
T 3cek_A           28 RIYSILKQIGSGGSSKVFQVLNE---KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY  104 (313)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECT---TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred             ceEEEEEEecCCCCEEEEEEEcC---CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence            34667799999999999999874   4668999998543  3445678999999999997  599999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +||| +.+++|.+++... ..+++..+..++.||++||.|||++   +|+||||||+|||++     + +.+||+|||++
T Consensus       105 lv~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-----~-~~~kL~Dfg~~  173 (313)
T 3cek_A          105 MVME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-----D-GMLKLIDFGIA  173 (313)
T ss_dssp             EEEC-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-----T-TEEEECCCSSS
T ss_pred             EEEe-cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-----C-CeEEEeecccc
Confidence            9999 5688999999754 5688999999999999999999999   999999999999996     3 68999999999


Q ss_pred             cccCCCCCc-ccccccCCccccCcccccC-----------CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchh
Q 047157          644 KLLNKDQTR-TDTNMRGTMGYVAPEWLRN-----------VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI  711 (788)
Q Consensus       644 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~  711 (788)
                      ......... ......|++.|+|||.+.+           ..++.++||||||+++|||++|+.||.......       
T Consensus       174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-------  246 (313)
T 3cek_A          174 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-------  246 (313)
T ss_dssp             CC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-------
T ss_pred             ccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH-------
Confidence            876543322 2233568999999999865           478889999999999999999999996432110       


Q ss_pred             hhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          712 VLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       712 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                         ..... ......        .........+.+.+++.+||+.||++|||++|+++.
T Consensus       247 ---~~~~~-~~~~~~--------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          247 ---SKLHA-IIDPNH--------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             ---HHHHH-HHCTTS--------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ---HHHHH-HHhccc--------ccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence               00000 111110        000011113567889999999999999999999864

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=2.6e-35  Score=315.67  Aligned_cols=250  Identities=22%  Similarity=0.318  Sum_probs=178.7

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .|.+.+.||+|+||.||+|...  .++..||||.+....  ....+.+.++..+++.++||||+++++++.+.+..++||
T Consensus        26 ~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           26 DLENLGEMGSGTCGQVWKMRFR--KTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GEEEEEEC------CEEEEEET--TTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccccceeeecCCeeEEEEEEe--cCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            4566789999999999999886  567799999986542  223334455556788889999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhh-ccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE-ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+ ++.+..+.......+++..+..++.||+.||.|||+ .   +|+|+||||+||+++     .++.+||+|||++..
T Consensus       104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~-----~~~~~kl~dfg~~~~  174 (318)
T 2dyl_A          104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLD-----ERGQIKLCDFGISGR  174 (318)
T ss_dssp             CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEEC-----TTSCEEECCCTTC--
T ss_pred             ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEEC-----CCCCEEEEECCCchh
Confidence            999 566666665556778999999999999999999998 5   899999999999998     788999999999976


Q ss_pred             cCCCCCcccccccCCccccCccccc-----CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLR-----NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      ......  .....+++.|+|||.+.     ...++.++||||||+++|||++|+.||.......       ..   . ..
T Consensus       175 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------~~---~-~~  241 (318)
T 2dyl_A          175 LVDDKA--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF-------EV---L-TK  241 (318)
T ss_dssp             --------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH-------HH---H-HH
T ss_pred             ccCCcc--ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH-------HH---H-HH
Confidence            543322  22346899999999984     5578899999999999999999999997532110       00   0 11


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .......       ...........+.+++.+||+.||++|||++|+++
T Consensus       242 ~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          242 VLQEEPP-------LLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             HHHSCCC-------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HhccCCC-------CCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            1111100       01111123456788999999999999999999986

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.4e-35  Score=330.92  Aligned_cols=252  Identities=23%  Similarity=0.301  Sum_probs=186.7

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .+.+.++||+|+||+|+....   .++..||||++.....   ..+.+|+++++++ +||||+++++++.+....++|||
T Consensus        25 ~y~~~~~LG~G~~G~V~~~~~---~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E   98 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVYRGM---FDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE   98 (432)
T ss_dssp             EEEEEEEEEECGGGCEEEEEE---SSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             EEecCCeeecCcCEEEEEEEE---eCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence            355568999999999664333   4567899999864322   2356899999988 79999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+. ++|.+++...........++.++.||+.||.|||++   +|+||||||+|||++..+......+||+|||++....
T Consensus        99 ~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~  174 (432)
T 3p23_A           99 LCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA  174 (432)
T ss_dssp             CCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred             CCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence            996 699999977665566666788999999999999999   9999999999999964332245678999999998765


Q ss_pred             CCCC--cccccccCCccccCccccc---CCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHh
Q 047157          648 KDQT--RTDTNMRGTMGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       648 ~~~~--~~~~~~~gt~~y~aPE~~~---~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      ....  .......||+.|+|||++.   ...++.++|||||||++|||++ |..||........            ....
T Consensus       175 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~------------~~~~  242 (432)
T 3p23_A          175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA------------NILL  242 (432)
T ss_dssp             -----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH------------HHHT
T ss_pred             CCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH------------HHHh
Confidence            4321  2233467999999999997   4577889999999999999999 8899854321110            0000


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .....       ............+.+++.+||+.||++|||++||++
T Consensus       243 ~~~~~-------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          243 GACSL-------DCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             TCCCC-------TTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccCCc-------cccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            00000       011112234456788999999999999999999984

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=4e-35  Score=327.99  Aligned_cols=251  Identities=27%  Similarity=0.355  Sum_probs=185.0

Q ss_pred             ccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEEecCC
Q 047157          492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVYELMP  570 (788)
Q Consensus       492 ~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~e~~~  570 (788)
                      ..++||+|+||+||.+..   .++..||||++....   .+.+.+|++++.++ +||||+++++++.+.+..++||||+.
T Consensus        19 ~~~~LG~G~~g~V~~~~~---~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~   92 (434)
T 2rio_A           19 SEKILGYGSSGTVVFQGS---FQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN   92 (434)
T ss_dssp             EEEEEEECSTTCEEEEEE---SSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred             ccCeEeeCCCeEEEEEEE---ECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence            457899999999986543   457799999986542   34678899999876 89999999999999999999999995


Q ss_pred             CCCHhHhhhccCCCC------CHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCC--------CCCCCcEE
Q 047157          571 NGTLSNFLFHEGQRP------GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKT--------LDTNYMAK  636 (788)
Q Consensus       571 ~gsL~~~l~~~~~~~------~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~--------~~~~~~~k  636 (788)
                       |+|.+++.......      .+..++.++.||+.||.|||++   +|+||||||+|||++..+        ...+..+|
T Consensus        93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k  168 (434)
T 2rio_A           93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL  168 (434)
T ss_dssp             -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred             -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEE
Confidence             69999996543221      2334578999999999999999   999999999999997321        01456899


Q ss_pred             EeecCCccccCCCCCc---ccccccCCccccCcccccC-------CCCCccCcchhhHHHHHHHHh-CCCCCCccccccc
Q 047157          637 ISDFGISKLLNKDQTR---TDTNMRGTMGYVAPEWLRN-------VPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEE  705 (788)
Q Consensus       637 L~Dfg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~  705 (788)
                      |+|||++.........   ......||+.|+|||++.+       ..++.++|||||||++|||++ |+.||......+ 
T Consensus       169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-  247 (434)
T 2rio_A          169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE-  247 (434)
T ss_dssp             ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-
T ss_pred             EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-
Confidence            9999999977543322   1234579999999999865       678999999999999999999 999996432111 


Q ss_pred             cccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          706 SEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       706 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                              ..     ....... .  .............++.+++.+||+.||++|||+.||++
T Consensus       248 --------~~-----i~~~~~~-~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          248 --------SN-----IIRGIFS-L--DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             --------HH-----HHHTCCC-C--CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --------HH-----HhcCCCC-c--ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence                    00     0001000 0  11122234456678999999999999999999999986

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=9.7e-36  Score=319.56  Aligned_cols=243  Identities=24%  Similarity=0.403  Sum_probs=196.7

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchH------HHHHHHHHHHHHhcCCC--ccccceEeeEEec
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE------KTNEEFMTELKIIGRTH--HKNLVRLLGFCSE  558 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~  558 (788)
                      ...|.+.+.||+|+||.||+|...  .++..||||.+.....      ...+.+.+|+.++++++  ||||+++++++.+
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~  119 (320)
T 3a99_A           42 ESQYQVGPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER  119 (320)
T ss_dssp             TTTEEEEEECSSSSSCEEEEEEET--TTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred             cCceEEEEEEeeCCCeEEEEEEEC--CCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence            345777899999999999999876  6678999999865432      12245678999999885  5999999999999


Q ss_pred             CCeEEEEEecCCC-CCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          559 EDKRLLVYELMPN-GTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       559 ~~~~~lV~e~~~~-gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                      .+..++|+|++.+ ++|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++.    .++.+||
T Consensus       120 ~~~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~----~~~~~kL  191 (320)
T 3a99_A          120 PDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDL----NRGELKL  191 (320)
T ss_dssp             SSEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEET----TTTEEEE
T ss_pred             CCcEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeC----CCCCEEE
Confidence            9999999999976 8999999654 5688999999999999999999999   9999999999999972    4578999


Q ss_pred             eecCCccccCCCCCcccccccCCccccCcccccCCCC-CccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHH
Q 047157          638 SDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDW  716 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~  716 (788)
                      +|||++.......   .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||......             
T Consensus       192 ~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-------------  255 (320)
T 3a99_A          192 IDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-------------  255 (320)
T ss_dssp             CCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-------------
T ss_pred             eeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh-------------
Confidence            9999998765332   233568999999999977665 68899999999999999999999643110             


Q ss_pred             HHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          717 VISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       717 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                           .....  ..        .....+.+.+++.+||+.||++|||++||++.
T Consensus       256 -----~~~~~--~~--------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          256 -----IRGQV--FF--------RQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             -----HHCCC--CC--------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             -----hcccc--cc--------cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                 00000  00        01123567889999999999999999999874

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.4e-35  Score=317.02  Aligned_cols=246  Identities=25%  Similarity=0.410  Sum_probs=189.8

Q ss_pred             HHHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchH------HHHHHHHHHHHHhcCC----CccccceEe
Q 047157          484 ELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE------KTNEEFMTELKIIGRT----HHKNLVRLL  553 (788)
Q Consensus       484 ~l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~------~~~~~~~~E~~~l~~l----~hpniv~~~  553 (788)
                      +.....|.+.+.||+|+||.||+|...  .++..||||.+.....      .....+.+|+.++.++    +||||++++
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~  104 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRL--TDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL  104 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECT--TTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEc--cCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence            344567888899999999999999775  5677999999865432      1233456788888887    899999999


Q ss_pred             eEEecCCeEEEEEec-CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCC
Q 047157          554 GFCSEEDKRLLVYEL-MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTN  632 (788)
Q Consensus       554 ~~~~~~~~~~lV~e~-~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~  632 (788)
                      +++.+.+..++|+|+ +.+++|.+++... ..+++..++.++.||+.||.|||++   +|+||||||+||+++.    .+
T Consensus       105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~----~~  176 (312)
T 2iwi_A          105 DWFETQEGFMLVLERPLPAQDLFDYITEK-GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDL----RR  176 (312)
T ss_dssp             EEC-----CEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEET----TT
T ss_pred             EEEecCCeEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeC----CC
Confidence            999999999999999 7899999999764 4689999999999999999999999   9999999999999972    46


Q ss_pred             CcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCC-ccCcchhhHHHHHHHHhCCCCCCccccccccccchh
Q 047157          633 YMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVT-TKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI  711 (788)
Q Consensus       633 ~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~  711 (788)
                      +.+||+|||++.......   .....|+..|+|||++.+..+. .++||||||+++|||++|+.||......        
T Consensus       177 ~~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------  245 (312)
T 2iwi_A          177 GCAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI--------  245 (312)
T ss_dssp             TEEEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH--------
T ss_pred             CeEEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH--------
Confidence            789999999998765432   2345689999999998776664 5899999999999999999999643110        


Q ss_pred             hhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          712 VLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       712 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                                .....        .  ........+.+++.+||+.||++|||++|++++
T Consensus       246 ----------~~~~~--------~--~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          246 ----------LEAEL--------H--FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             ----------HHTCC--------C--CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             ----------hhhcc--------C--CcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                      00000        0  001123567889999999999999999999983

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=2.8e-35  Score=338.56  Aligned_cols=278  Identities=24%  Similarity=0.267  Sum_probs=202.0

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEec------CC
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE------ED  560 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~  560 (788)
                      ..|.+.+.||+|+||+||+|.+.  .++..||||.+... .....+.+.+|++++++++||||+++++++..      .+
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~--~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~   91 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQ--DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND   91 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCT--TTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred             CCeEEEEEEeeCCCeEEEEEEEC--CCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence            45778899999999999999875  66779999998654 34556789999999999999999999998765      67


Q ss_pred             eEEEEEecCCCCCHhHhhhccC--CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEe
Q 047157          561 KRLLVYELMPNGTLSNFLFHEG--QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS  638 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~  638 (788)
                      ..++||||+++++|.+++....  ..+++..++.++.||+.||.|||+.   +|+||||||+||+++..+  ....+||+
T Consensus        92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g--~~~~vKL~  166 (676)
T 3qa8_A           92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGP--QRLIHKII  166 (676)
T ss_dssp             SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCS--SSCEEEEC
T ss_pred             eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCC--CceeEEEc
Confidence            7899999999999999997643  2578889999999999999999999   999999999999998433  34459999


Q ss_pred             ecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHH
Q 047157          639 DFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVI  718 (788)
Q Consensus       639 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  718 (788)
                      |||++........  .....|++.|+|||.+.+..++.++||||||+++|||++|+.||...............  ....
T Consensus       167 DFG~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~--~~~~  242 (676)
T 3qa8_A          167 DLGYAKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE--KSNE  242 (676)
T ss_dssp             SCCCCCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC-------
T ss_pred             ccccccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhc--ccch
Confidence            9999987654332  23457899999999999999999999999999999999999999754211100000000  0000


Q ss_pred             HHhhcccccccc--cCC--CCCcccHHHHHHHHHHHhHccCCCCCCCCCHHH-----HHHHhhcCcC
Q 047157          719 SCMLSRNLQVLV--SHD--PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKK-----VIHMLEGTLE  776 (788)
Q Consensus       719 ~~~~~~~~~~l~--~~~--~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e-----vl~~L~~~~~  776 (788)
                      ...........+  ...  ............+.+++.+||+.||++|||++|     ..+.++.++.
T Consensus       243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~  309 (676)
T 3qa8_A          243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS  309 (676)
T ss_dssp             -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred             hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence            000000000000  000  001112235678899999999999999999977     3445544443

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.2e-34  Score=340.30  Aligned_cols=240  Identities=21%  Similarity=0.312  Sum_probs=192.0

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCe-----
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDK-----  561 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~-----  561 (788)
                      ..|.+.+.||+|+||.||+|.+.. .++..||||.+... .....+.+.+|++++++++||||+++++++.+.+.     
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRN-VNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGG-GTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcC-CCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            457788999999999999998852 14678999988543 34556788999999999999999999999987665     


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      .+|||||+++++|.+++..   .+++.+++.++.||+.||.|||++   +|+||||||+|||++     .+ .+||+|||
T Consensus       159 ~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~-----~~-~~kl~DFG  226 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLT-----EE-QLKLIDLG  226 (681)
T ss_dssp             EEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----SS-CEEECCCT
T ss_pred             eEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEe-----CC-cEEEEecc
Confidence            7999999999999987743   689999999999999999999999   999999999999997     43 89999999


Q ss_pred             CccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      ++......     ....||+.|+|||++.+.. +.++||||||+++|+|++|..||........                
T Consensus       227 ~a~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----------------  284 (681)
T 2pzi_A          227 AVSRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------------  284 (681)
T ss_dssp             TCEETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------------
T ss_pred             cchhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc----------------
Confidence            99876443     3456899999999987654 8899999999999999999888764311100                


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-CHHHHHHHhhcC
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-SMKKVIHMLEGT  774 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~evl~~L~~~  774 (788)
                                  +...........+.+++.+||+.||++|| +++++.+.|.+.
T Consensus       285 ------------~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          285 ------------PEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             ------------CTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             ------------cccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence                        01111122345688899999999999999 566676766554

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=4.5e-34  Score=301.16  Aligned_cols=231  Identities=12%  Similarity=0.125  Sum_probs=183.4

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      ...|.+.+.||+|+||.||+|...  ..+..||||.+....   ....+.+.+|+.++.+++||||+++++++.+.+..+
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~  107 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDT--ALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGL  107 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEET--TTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             cCcEEEEEEEcccCCeEEEEEEec--CCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEE
Confidence            345778899999999999999886  667899999997542   344578999999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +||||+++++|.+++...   ....++..++.||+.||.|||++   +|+||||||+|||++     .++.+||++++  
T Consensus       108 lv~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~-----~~g~~kl~~~~--  174 (286)
T 3uqc_A          108 VVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVS-----IDGDVVLAYPA--  174 (286)
T ss_dssp             EEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEE-----TTSCEEECSCC--
T ss_pred             EEEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEc-----CCCCEEEEecc--
Confidence            999999999999999432   45567889999999999999999   999999999999998     78889997443  


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                                         |++       +++.++||||||+++|||++|+.||.............             
T Consensus       175 -------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~-------------  215 (286)
T 3uqc_A          175 -------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE-------------  215 (286)
T ss_dssp             -------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC-------------
T ss_pred             -------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH-------------
Confidence                               333       36889999999999999999999998654322110000             


Q ss_pred             ccccccccCCCCC--cccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          724 RNLQVLVSHDPEV--LSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       724 ~~~~~l~~~~~~~--~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                          ..+...+..  .......+.+.+++.+||+.||++| |+.|+++.|+.+..
T Consensus       216 ----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~  265 (286)
T 3uqc_A          216 ----RDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA  265 (286)
T ss_dssp             ----BCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred             ----HHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence                000000000  0001224568889999999999999 99999999987654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=2.7e-33  Score=297.54  Aligned_cols=241  Identities=22%  Similarity=0.301  Sum_probs=181.9

Q ss_pred             hccc-ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHh-cCCCccccceEeeEEec----CCeEE
Q 047157          490 KGFS-KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKII-GRTHHKNLVRLLGFCSE----EDKRL  563 (788)
Q Consensus       490 ~~~~-~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l-~~l~hpniv~~~~~~~~----~~~~~  563 (788)
                      |.+. +.||+|+||.||++...  .++..||+|.+...     ..+.+|++++ +.++||||+++++++..    ....+
T Consensus        19 y~~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           19 YKVTSQVLGLGINGKVLQIFNK--RTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             EEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             hhhcCcccccCCCeEEEEEEEc--CCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            4444 78999999999999886  66779999998653     3456788887 55699999999999876    67889


Q ss_pred             EEEecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          564 LVYELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      +||||+++++|.+++.... ..+++..++.++.||+.||.|||++   +|+||||||+|||++...  .++.+||+|||+
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~--~~~~~kl~Dfg~  166 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKR--PNAILKLTDFGF  166 (299)
T ss_dssp             EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSS--TTCCEEECCCTT
T ss_pred             EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCC--CCCcEEEecccc
Confidence            9999999999999997653 4689999999999999999999999   999999999999998432  378899999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML  722 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  722 (788)
                      +....                       +..++.++||||||+++|||++|+.||...........              
T Consensus       167 a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~--------------  209 (299)
T 3m2w_A          167 AKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--------------  209 (299)
T ss_dssp             CEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC--------------
T ss_pred             ccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH--------------
Confidence            86432                       23567899999999999999999999975432211100              


Q ss_pred             cccccccccCCCCCccc--HHHHHHHHHHHhHccCCCCCCCCCHHHHHH--HhhcCcCCCCCC
Q 047157          723 SRNLQVLVSHDPEVLSD--LERFERMAMVGLWCNHPDPNLRPSMKKVIH--MLEGTLEVGMPP  781 (788)
Q Consensus       723 ~~~~~~l~~~~~~~~~~--~~~~~~l~~l~~~cl~~dP~~RPt~~evl~--~L~~~~~~~~pp  781 (788)
                        ...............  ......+.+++.+||+.||++|||++|+++  .+.+....+.+|
T Consensus       210 --~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~~~~~~  270 (299)
T 3m2w_A          210 --MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP  270 (299)
T ss_dssp             --SCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGGSCCCB
T ss_pred             --HHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccccCCCCC
Confidence              000000000110000  123567889999999999999999999997  344444433333

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=9.5e-34  Score=314.76  Aligned_cols=237  Identities=15%  Similarity=0.095  Sum_probs=176.4

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCc-cccce---------Ee----
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHH-KNLVR---------LL----  553 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~h-pniv~---------~~----  553 (788)
                      ...++||+|+||+||+|.+.  .++..||||++....   ....+.+.+|+.+++.++| +|...         ..    
T Consensus        81 ~~~~~LG~G~fG~Vy~a~~~--~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  158 (413)
T 3dzo_A           81 VRGTVLGQEDPYAYLEATDQ--ETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK  158 (413)
T ss_dssp             EEEEEEEEETTEEEEEEEET--TTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred             EEecccccCCCEEEEEEEec--CCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence            34578999999999999986  667799999887332   2235678999999999977 32111         11    


Q ss_pred             --------eEEec-----CCeEEEEEecCCCCCHhHhhh------ccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEe
Q 047157          554 --------GFCSE-----EDKRLLVYELMPNGTLSNFLF------HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIH  614 (788)
Q Consensus       554 --------~~~~~-----~~~~~lV~e~~~~gsL~~~l~------~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH  614 (788)
                              .++..     ....+++|+++ +++|.+++.      ..+..+++..++.++.||++||+|||++   +|+|
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiH  234 (413)
T 3dzo_A          159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVH  234 (413)
T ss_dssp             CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred             cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cccc
Confidence                    11111     12456777765 689999884      2244567889999999999999999999   9999


Q ss_pred             cCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccc----------cCCCCCccCcchhhH
Q 047157          615 CDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL----------RNVPVTTKVDVFSFG  684 (788)
Q Consensus       615 ~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~s~k~DVwSlG  684 (788)
                      |||||+|||++     .++.+||+|||+++.....    .....| +.|+|||++          ....++.++||||||
T Consensus       235 rDiKp~NILl~-----~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlG  304 (413)
T 3dzo_A          235 TYLRPVDIVLD-----QRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLG  304 (413)
T ss_dssp             SCCCGGGEEEC-----TTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHH
T ss_pred             CCcccceEEEe-----cCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHH
Confidence            99999999998     7788999999998865432    334567 999999999          666788999999999


Q ss_pred             HHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCH
Q 047157          685 VMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSM  764 (788)
Q Consensus       685 vil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~  764 (788)
                      |++|||++|+.||......+...                    ..+....      ...+.+.+++.+||+.||++|||+
T Consensus       305 vil~elltg~~Pf~~~~~~~~~~--------------------~~~~~~~------~~~~~~~~li~~~l~~dP~~Rpt~  358 (413)
T 3dzo_A          305 LAIYWIWCADLPNTDDAALGGSE--------------------WIFRSCK------NIPQPVRALLEGFLRYPKEDRLLP  358 (413)
T ss_dssp             HHHHHHHHSSCCCCTTGGGSCSG--------------------GGGSSCC------CCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred             HHHHHHHHCCCCCCCcchhhhHH--------------------HHHhhcc------cCCHHHHHHHHHHccCChhhCcCH
Confidence            99999999999997653322111                    1111111      113568889999999999999997


Q ss_pred             HHHHH
Q 047157          765 KKVIH  769 (788)
Q Consensus       765 ~evl~  769 (788)
                      .|+++
T Consensus       359 ~~~l~  363 (413)
T 3dzo_A          359 LQAME  363 (413)
T ss_dssp             HHHTT
T ss_pred             HHHHh
Confidence            77643

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.98  E-value=1.7e-33  Score=304.19  Aligned_cols=249  Identities=14%  Similarity=0.110  Sum_probs=181.2

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccch--------HHHHHHHHHHHHHhcCCC---------cc
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--------EKTNEEFMTELKIIGRTH---------HK  547 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~---------hp  547 (788)
                      +....|.+.+.||+|+||+||+|+.    ++..||||++....        ....+.+.+|+++++.++         ||
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~   92 (336)
T 2vuw_A           17 LPTEKLQRCEKIGEGVFGEVFQTIA----DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTE   92 (336)
T ss_dssp             SCHHHHHTCEEEEEETTEEEEEEEE----TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCC
T ss_pred             cccccchheeeecccCceEEEEEEe----CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCC
Confidence            3356678889999999999999986    45799999997542        223367788888887775         66


Q ss_pred             ccceEeeE-----------------Eec-------------CCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHH
Q 047157          548 NLVRLLGF-----------------CSE-------------EDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGV  597 (788)
Q Consensus       548 niv~~~~~-----------------~~~-------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi  597 (788)
                      ||+++.++                 +.+             .+..++||||+++|++.+.+.+  ..+++..+..++.||
T Consensus        93 niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi  170 (336)
T 2vuw_A           93 GFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQL  170 (336)
T ss_dssp             CBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHH
T ss_pred             chhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHH
Confidence            66666554                 333             6789999999999977766633  567999999999999


Q ss_pred             HHHHHHhh-hccCCceEecCCCCCcEEeccCCC---------------CCCCcEEEeecCCccccCCCCCcccccccCCc
Q 047157          598 ARGLLYLH-EECETQIIHCDIKPQNVLLDLKTL---------------DTNYMAKISDFGISKLLNKDQTRTDTNMRGTM  661 (788)
Q Consensus       598 ~~aL~~LH-~~~~~~ivH~dlkp~NIll~~~~~---------------~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~  661 (788)
                      +.||.||| ++   +|+||||||+|||++..+.               .....+||+|||+++.....      ...||+
T Consensus       171 ~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~  241 (336)
T 2vuw_A          171 TASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCD  241 (336)
T ss_dssp             HHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCC
T ss_pred             HHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEee
Confidence            99999999 88   9999999999999983210               01128999999999876432      347899


Q ss_pred             cccCcccccCCCCCccCcchhhHHH-HHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccH
Q 047157          662 GYVAPEWLRNVPVTTKVDVFSFGVM-LLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDL  740 (788)
Q Consensus       662 ~y~aPE~~~~~~~s~k~DVwSlGvi-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  740 (788)
                      .|+|||++.+.. +.++||||++++ .+++++|..||.....           ............   ............
T Consensus       242 ~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~-----------~~~~~~~~~~~~---~~~~~~~~~~~~  306 (336)
T 2vuw_A          242 VSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW-----------LHYLTDKMLKQM---TFKTKCNTPAMK  306 (336)
T ss_dssp             CTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH-----------HHHHHHHHHHTC---CCSSCCCSHHHH
T ss_pred             cccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhh-----------hhHHHHhhhhhh---ccCcccchhhhh
Confidence            999999998766 899999998776 7888899998843100           000111111000   000111111233


Q ss_pred             HHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 047157          741 ERFERMAMVGLWCNHPDPNLRPSMKKVI  768 (788)
Q Consensus       741 ~~~~~l~~l~~~cl~~dP~~RPt~~evl  768 (788)
                      ...+++.+|+.+||+.|     |++|++
T Consensus       307 ~~s~~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          307 QIKRKIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred             hcCHHHHHHHHHHhccC-----CHHHHH
Confidence            56778999999999866     999988

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=99.97  E-value=1.8e-31  Score=271.42  Aligned_cols=206  Identities=19%  Similarity=0.249  Sum_probs=147.9

Q ss_pred             cCCCccCCCCceecCCCCeeecCCCeEEEeeeecCCCceEEEEEeCCCCCCeEEEEecCCCCCCCCcEEEEecCCceEEE
Q 047157           23 QTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLT  102 (788)
Q Consensus        23 ~~~~~i~~~~~l~~~~~~~~vS~~g~F~lGFf~~~~~~~y~giw~~~~~~~tvVWvANr~~p~~~~s~l~l~~~G~L~l~  102 (788)
                      +..++|++|++|+++  ++|  ++|.|+|||+.+++.    . +|..   +|+||+|||+.|  .++.|+|..||||||.
T Consensus         6 ~~~~~i~~g~~L~~g--~~l--~~g~f~l~f~~~gnl----~-ly~~---~~~vW~an~~~~--~~~~l~l~~dGnLvl~   71 (236)
T 1dlp_A            6 GLSHEGSHPQTLHAA--QSL--ELSSFRFTMQSDCNL----V-LFDS---DVRVWASNTAGA--TGCRAVLQSDGLLVIL   71 (236)
T ss_dssp             CSSSSSCSCSCCCTT--CEE--CSTTEEEEECTTSCE----E-EEES---SSEEECCCCCSC--SCCBCCBCSSSCBCCB
T ss_pred             eccceeCCCCEECCC--CEE--EcCCEEEEECCCCcE----E-EEEC---CEEEEECCCCCC--CCeEEEEcCCCcEEEE
Confidence            566899999999975  577  599999999865442    2 3432   799999999998  6678999999999999


Q ss_pred             eCCCcEEEEeccc------ccccccCCCCcEEEEecCCceeecccCCCCCcc----------cCCccccCCC-eEEeecC
Q 047157          103 YFNGSVQQIYSGA------ASLALMQNDGNFVLKNANSAVVWDSFDFPTDTI----------LPGQVLLTGK-KLYSNSR  165 (788)
Q Consensus       103 ~~~~~~~~~~s~~------~~~a~LldsGNlVl~~~~~~~lWqSFD~PtDtl----------lpg~~l~~g~-~l~s~~~  165 (788)
                      |.+|++  +|+++      ...|+|+|+|||||+++   ++||||||||||+          +|||+++.+. .|    .
T Consensus        72 d~~~~~--vW~s~~~~~~~~~~~~l~d~Gnlvl~~~---~~W~S~~~p~~t~~lp~~g~d~L~~gq~~~~~~~~L----~  142 (236)
T 1dlp_A           72 TAQNTI--RWSSGTKGSIGNYVLVLQPDRTVTIYGP---GLWDSGTSNKGSVVVANNGNSILYSTQGNDNHPQTL----H  142 (236)
T ss_dssp             CTTTCC--SCCCCCCCCSSCCEEEECSSSCEEEECS---EEEECSCCCSSCCCCSSCCCEECCCC--CCCCCCEE----C
T ss_pred             cCCCcE--EEeCCccccCCcEEEEEeCCCCEEEecC---CEEECCCCCCcccccCCccceEEecCCcCCCccceE----E
Confidence            988876  34432      13689999999999964   8999999998766          5555554432 23    2


Q ss_pred             CCCCCCCCceEEeeccCCcceeeecccCCCCCcccCccccc-ceeeeeccceeEEEEecCCcceEEEEeeccCCCCceEE
Q 047157          166 GTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTLN-NVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYH  244 (788)
Q Consensus       166 ~~~dps~G~~~~~~~~~g~~~~~~~~~~~~~yw~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (788)
                      +..||++|.|++.++++|++.  ++... ..||+++++... .....+...+.++++..+++.++... ..  ... ..+
T Consensus       143 s~~d~s~G~~~l~l~~dG~Lv--L~~~~-~~~W~s~~~~~~~~~~~~L~~~Gnl~ly~~~~~~vw~s~-~~--~~~-~~~  215 (236)
T 1dlp_A          143 ATQSLQLSPYRLSMETDCNLV--LFDRD-DRVWSTNTAGKGTGCRAVLQPNGRMDVLTNQNIAVWTSG-NS--RSA-GRY  215 (236)
T ss_dssp             SSCCCBCSSCEEEEETTTEEE--EEBTT-BCCSCCCCCSSCSSCEEEEETTTEEEEEETTTEEEEECC-CC--CSS-SCC
T ss_pred             cCcEeecCcEEEEECCCCcEE--EEcCC-EeEEeCCCcCCCCceEEEECCCCcEEEEeCCCcEEEEeC-CC--CCC-CCE
Confidence            478999999999999999654  34433 479999987532 12234555666666665544333222 11  112 357


Q ss_pred             EEEEeCCccEEEEE
Q 047157          245 RATIDGHGNFQQFA  258 (788)
Q Consensus       245 rl~ld~~G~l~~~~  258 (788)
                      |++||.||++++|.
T Consensus       216 rl~Ld~dG~l~ly~  229 (236)
T 1dlp_A          216 VFVLQPDRNLAIYG  229 (236)
T ss_dssp             EEEECSSSCEEEEC
T ss_pred             EEEEcCCCcEEEeC
Confidence            99999999999984

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.94  E-value=2.3e-28  Score=280.89  Aligned_cols=186  Identities=19%  Similarity=0.137  Sum_probs=129.3

Q ss_pred             cccccccceEEEEEEeccCcceeeeeeecccc----------hHHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEE
Q 047157          495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD----------IEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       495 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~----------~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~  563 (788)
                      ..+.|++|.+..++..  -.+..+++|.+.+.          .+...++|.+|+++|+++ +|+||+++++++++++..|
T Consensus       241 ~~~~~~~~~h~~~rr~--~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~y  318 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRY--FFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGW  318 (569)
T ss_dssp             C-C--------CCEEE--EECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEE
T ss_pred             ccccCCcccccccccc--cccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEE
Confidence            3455666655554433  34567888887543          234456899999999999 7999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      |||||++|++|.++|... ..++..   +|+.||+.||+|||++   +||||||||+|||++     .++.+||+|||++
T Consensus       319 LVMEyv~G~~L~d~i~~~-~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~-----~dg~vKL~DFGlA  386 (569)
T 4azs_A          319 LVMEKLPGRLLSDMLAAG-EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVD-----ARQHARLIDFGSI  386 (569)
T ss_dssp             EEEECCCSEEHHHHHHTT-CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEEC-----TTSCEEECCCTTE
T ss_pred             EEEecCCCCcHHHHHHhC-CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEEC-----CCCCEEEeecccC
Confidence            999999999999999765 445543   5889999999999999   999999999999998     8889999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCC
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRH  696 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p  696 (788)
                      +........ ....+||+.|+|||++.+ .+..++|+||+|++++++.++..+
T Consensus       387 r~~~~~~~~-~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          387 VTTPQDCSW-PTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             ESCC---CC-SHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             eeCCCCCcc-ccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence            876544332 234679999999999976 467789999999999888765443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.90  E-value=1.3e-24  Score=248.40  Aligned_cols=182  Identities=16%  Similarity=0.231  Sum_probs=143.1

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccch--------HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--------EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      .++||+|+||.||++..    .+..+++|+.....        ....+++.+|++++++++||||+++..++...+..+|
T Consensus       341 ~~~LG~G~fg~Vy~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l  416 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSY----LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI  416 (540)
T ss_dssp             -------CCEEEEEEEC----SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred             CCEEeeCCCEEEEEEEE----CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence            46899999999999943    34567777643211        1224568999999999999999966666667778899


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++++|.+++..         +..++.||++||.|||++   +|+||||||+|||++     .  .+||+|||+++
T Consensus       417 VmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~-----~--~~kL~DFGla~  477 (540)
T 3en9_A          417 MMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFD-----K--DLYIIDFGLGK  477 (540)
T ss_dssp             EEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEES-----S--SEEECCCTTCE
T ss_pred             EEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEEC-----C--eEEEEECccCE
Confidence            9999999999999955         568999999999999999   999999999999997     4  89999999999


Q ss_pred             ccCCCCCcc------cccccCCccccCcccccC--CCCCccCcchhhHHHHHHHHhCCCCC
Q 047157          645 LLNKDQTRT------DTNMRGTMGYVAPEWLRN--VPVTTKVDVFSFGVMLLEIICGRRHI  697 (788)
Q Consensus       645 ~~~~~~~~~------~~~~~gt~~y~aPE~~~~--~~~s~k~DVwSlGvil~elltg~~p~  697 (788)
                      .........      .....||+.|+|||++..  ..|+.+.|+|+..+-..+-+.++.++
T Consensus       478 ~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          478 ISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             ECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             ECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            875432211      234679999999999976  57888999999999998888877665

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.81  E-value=1.9e-20  Score=196.07  Aligned_cols=143  Identities=17%  Similarity=0.119  Sum_probs=113.7

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeecccchH------------------HHHHHHHHHHHHhcCCCccccceE
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE------------------KTNEEFMTELKIIGRTHHKNLVRL  552 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~------------------~~~~~~~~E~~~l~~l~hpniv~~  552 (788)
                      .+.+.||+|+||.||+|..   .++..||+|.++....                  .....+.+|++++++++  | +++
T Consensus        93 ~~~~~iG~G~~g~Vy~~~~---~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v  166 (282)
T 1zar_A           93 AIGKLMGEGKESAVFNCYS---EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAV  166 (282)
T ss_dssp             EEEEEEEECSSEEEEEEEE---TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSS
T ss_pred             EecCEeccCCCceEEEEEe---CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCc
Confidence            3458999999999999987   4677999999864321                  23567899999999998  4 566


Q ss_pred             eeEEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCC
Q 047157          553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTN  632 (788)
Q Consensus       553 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~  632 (788)
                      .+++.. +..++||||+++++|.+ +..       .....++.||+.||.|||++   +|+||||||+|||++      +
T Consensus       167 ~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~------~  228 (282)
T 1zar_A          167 PKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS------E  228 (282)
T ss_dssp             CCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE------T
T ss_pred             CeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE------C
Confidence            665543 55699999999999998 421       12346999999999999999   999999999999996      4


Q ss_pred             CcEEEeecCCccccCCCCCcccccccCCccccCcccccC
Q 047157          633 YMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN  671 (788)
Q Consensus       633 ~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~  671 (788)
                      +.+||+|||++..              +..++|||++..
T Consensus       229 ~~vkl~DFG~a~~--------------~~~~~a~e~l~r  253 (282)
T 1zar_A          229 EGIWIIDFPQSVE--------------VGEEGWREILER  253 (282)
T ss_dssp             TEEEECCCTTCEE--------------TTSTTHHHHHHH
T ss_pred             CcEEEEECCCCeE--------------CCCCCHHHHHHH
Confidence            5899999999974              345789998753

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=99.73  E-value=2.3e-17  Score=147.39  Aligned_cols=104  Identities=17%  Similarity=0.263  Sum_probs=85.0

Q ss_pred             cCCCccCCCCceecCCCCeee--cCCCeEEEeeeecCCCceEEEEEeCCCCCCeEEEEecCCCCCCCCcEEEEecCCceE
Q 047157           23 QTSPNISLGSSITAGSNTSWL--SPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLL  100 (788)
Q Consensus        23 ~~~~~i~~~~~l~~~~~~~~v--S~~g~F~lGFf~~~~~~~y~giw~~~~~~~tvVWvANr~~p~~~~s~l~l~~~G~L~  100 (788)
                      +..++|.+|++|.++  ++|+  |++|.|+|+|+++++  .   +||++   +++||+|||+.| ..++.++|..|||||
T Consensus         6 ~~~~~l~~g~~L~~g--~~l~~~S~~g~~~L~~~~dgn--l---vly~~---~~~vW~sn~~~~-~~~~~l~l~~dGNLV   74 (119)
T 1b2p_A            6 SKQPDDNHPQILHAT--ESLEILFGTHVYRFIMQTDCN--L---VLYDN---NNPIWATNTGGL-GNGCRAVLQPDGVLV   74 (119)
T ss_dssp             CSCSSSCCCCEEETT--CEEEEEETTEEEEEEECTTSC--E---EEEET---TEEEEECCCTTS-CSSCEEEECTTSCEE
T ss_pred             ecCcccCCCCEEcCC--CEEEEeCCCCCEEEEEecCCC--E---EEEEC---CEEEEeCCCccC-CCceEEEEccCCEEE
Confidence            456789999999976  5899  999999999998664  2   58875   799999999877 345789999999999


Q ss_pred             EEeCCCcEEEEeccc----ccccccCCCCcEEEEecCCceeecc
Q 047157          101 LTYFNGSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDS  140 (788)
Q Consensus       101 l~~~~~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqS  140 (788)
                      |.|.++++.|.+.+.    ...++|+|+|||||++   .++|||
T Consensus        75 l~d~~~~~lW~S~~~~~~g~~~l~l~~~Gnlvl~~---~~~W~S  115 (119)
T 1b2p_A           75 VITNENVTVWQSPVAGKAGHYVLVLQPDRNVVIYG---DALWAT  115 (119)
T ss_dssp             EECTTCCEEEECSCCCCSSCEEEEECTTSCEEEEE---SEEEEC
T ss_pred             EEeCCCcEEEcCCCCCCCCCEEEEEECCCcEEEEC---ccEeCC
Confidence            999888765443332    2368999999999998   389998

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=99.71  E-value=3.5e-17  Score=144.34  Aligned_cols=106  Identities=22%  Similarity=0.348  Sum_probs=84.9

Q ss_pred             CCccCCCCceecCCCCeeecCCCeEEEeeeecCCCceEEEEEeCCCCCCeEEEEecCCCCCCCCcEEEEecCCceEEEeC
Q 047157           25 SPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYF  104 (788)
Q Consensus        25 ~~~i~~~~~l~~~~~~~~vS~~g~F~lGFf~~~~~~~y~giw~~~~~~~tvVWvANr~~p~~~~s~l~l~~~G~L~l~~~  104 (788)
                      +|+|..|+.|..+  ++|+ ++|.|+|+|+..++  .   |||+   ..++||+||++.|. .++.+.|..||||||.|.
T Consensus         1 ~d~l~~g~~L~~g--~~l~-~~~~~~l~~~~dGn--l---vl~~---~~~~vW~sn~~~~~-~~~~l~l~~dGNLVl~~~   68 (110)
T 3a0c_A            1 VNSLSSPNSLFTG--HSLE-VGPSYRLIMQGDCN--F---VLYD---SGKPVWASNTGGLG-SGCRLTLHNNGNLVIYDQ   68 (110)
T ss_dssp             CCEEETTCEECTT--CEEE-ETTTEEEEECTTSC--E---EEEE---TTEEEEECCCTTSC-SSCEEEECTTSCEEEECT
T ss_pred             CCEeCCCCEECCC--CEEE-ECCCEEEEEcCCCc--E---EEEE---CCEEEEECCCCCCC-CcEEEEEeCCCCEEEECC
Confidence            4789999999865  6899 99999999987654  2   6776   37999999998763 457899999999999998


Q ss_pred             CCcEEEEecccc----cccccCCCCcEEEEecCCceeecccCCCC
Q 047157          105 NGSVQQIYSGAA----SLALMQNDGNFVLKNANSAVVWDSFDFPT  145 (788)
Q Consensus       105 ~~~~~~~~s~~~----~~a~LldsGNlVl~~~~~~~lWqSFD~Pt  145 (788)
                      ++++.|.+.+..    ..++|+|+|||||++.   .+||||+||.
T Consensus        69 ~~~~~W~S~t~~~~g~~~l~l~~dGnlvl~~~---~~W~S~~~~~  110 (110)
T 3a0c_A           69 SNRVIWQTKTNGKEDHYVLVLQQDRNVVIYGP---VVWATGSGPA  110 (110)
T ss_dssp             TCCEEEECCCCCSSSCCEEEECTTSCEEEECS---EEEECSCCC-
T ss_pred             CCcEEEecCCCCCCCCEEEEEeCCccEEEECC---CEecCCCcCC
Confidence            887654433322    2688999999999975   8999999984

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.71  E-value=5e-18  Score=175.40  Aligned_cols=136  Identities=18%  Similarity=0.171  Sum_probs=104.0

Q ss_pred             cccccccccccceEEEEEEeccCccee--eeeeecccchH------------------------HHHHHHHHHHHHhcCC
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIE--IAVKKLEKDIE------------------------KTNEEFMTELKIIGRT  544 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~--vavK~l~~~~~------------------------~~~~~~~~E~~~l~~l  544 (788)
                      .+.+.||+|+||.||+|...  .++..  ||||.++....                        .....+.+|++++.++
T Consensus        50 ~i~~~ig~G~~g~Vy~a~~~--~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           50 AMGGVISTGKEANVFYADGV--FDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEECSSEEEEEEEEE--ETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             hhCCEEeecceEEEEEEEEc--CCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            45688999999999999874  34557  99998643211                        1124688999999999


Q ss_pred             Ccccc--ceEeeEEecCCeEEEEEecCCC-C----CHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhh-hccCCceEecC
Q 047157          545 HHKNL--VRLLGFCSEEDKRLLVYELMPN-G----TLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH-EECETQIIHCD  616 (788)
Q Consensus       545 ~hpni--v~~~~~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH-~~~~~~ivH~d  616 (788)
                      +|+++  +.++++    +..+|||||+.+ |    +|.++...    .++..+..++.||+.+|.||| +.   +|+|||
T Consensus       128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~---givHrD  196 (258)
T 1zth_A          128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQEA---ELVHAD  196 (258)
T ss_dssp             HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHTS---CEECSS
T ss_pred             HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHHC---CEEeCC
Confidence            88864  444443    356899999942 3    67766532    123456789999999999999 88   999999


Q ss_pred             CCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          617 IKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       617 lkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      |||+|||++     .  .++|+|||++...
T Consensus       197 lkp~NILl~-----~--~~~liDFG~a~~~  219 (258)
T 1zth_A          197 LSEYNIMYI-----D--KVYFIDMGQAVTL  219 (258)
T ss_dssp             CSTTSEEES-----S--SEEECCCTTCEET
T ss_pred             CCHHHEEEc-----C--cEEEEECcccccC
Confidence            999999997     4  8999999999764

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=99.67  E-value=2.3e-16  Score=140.47  Aligned_cols=106  Identities=20%  Similarity=0.333  Sum_probs=83.8

Q ss_pred             CCccCCCCceecCCCCeeecCCCeEEEeeeecCCCceEEEEEeCCCCCCeEEEEecCCCCCCCCcEEEEecCCceEEEeC
Q 047157           25 SPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYF  104 (788)
Q Consensus        25 ~~~i~~~~~l~~~~~~~~vS~~g~F~lGFf~~~~~~~y~giw~~~~~~~tvVWvANr~~p~~~~s~l~l~~~G~L~l~~~  104 (788)
                      .|+|.+||+|..+  ++|+  +|.|+|+|++.++  ..   +|+   ..++||+||++.|. .++.|.|..+|||||.|.
T Consensus         2 ~dtl~~gq~L~~g--~~L~--~g~~~L~~~~dgn--lv---ly~---~~~~vW~sn~~~~~-~~~~l~l~~~GnLvl~d~   68 (115)
T 2dpf_A            2 DNVLLSGQTLHAD--HSLQ--AGAYTLTIQNKCN--LV---KYQ---NGRQIWASNTDRRG-SGCRLTLLSDGNLVIYDH   68 (115)
T ss_dssp             CCEEETTCEEETT--EEEE--ETTEEEEECTTSC--EE---EEE---TTEEEEECSCTTSC-SSCEEEECTTSCEEEECT
T ss_pred             CCEeCCCCEECCC--CEEE--CCCEEEEEcCCCc--EE---EEe---CCEEEEeCCCCCCC-CceEEEECCCCcEEEECC
Confidence            4789999999965  6788  8999999986553  32   354   48999999999884 457899999999999998


Q ss_pred             CCcEEEEeccc----ccccccCCCCcEEEEecCCceeecccCCCCC
Q 047157          105 NGSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDSFDFPTD  146 (788)
Q Consensus       105 ~~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqSFD~PtD  146 (788)
                      +++..|.+...    ...++|+|+|||||++.   ++||||.++..
T Consensus        69 ~~~~vW~S~~~~~~g~~~l~l~~dGnlvl~~~---~~W~S~~~~~~  111 (115)
T 2dpf_A           69 NNNDVWGSACWGDNGKYALVLQKDGRFVIYGP---VLWSLGPNGCR  111 (115)
T ss_dssp             TCCEEEECCCCCSSSCCEEEECTTSCEEEECS---EEECSSTTCBC
T ss_pred             CceEEEEcCCCCCCCCEEEEEeCCCeEEEECC---CEEECCCCCCc
Confidence            77764433222    23689999999999964   89999998765

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=99.66  E-value=2.3e-16  Score=137.57  Aligned_cols=100  Identities=18%  Similarity=0.332  Sum_probs=80.8

Q ss_pred             CccCCCCceecCCCCeeecCCCeEEEeeeecCCCceEEEEEeCCCCCCeEEEEecCCCCCCCCcEEEEecCCceEEEeCC
Q 047157           26 PNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFN  105 (788)
Q Consensus        26 ~~i~~~~~l~~~~~~~~vS~~g~F~lGFf~~~~~~~y~giw~~~~~~~tvVWvANr~~p~~~~s~l~l~~~G~L~l~~~~  105 (788)
                      ++|.+||.|.++  ++|+|  |.|.|.|...++    |.++.    ..++||+|||+.|..+++.|+|..||||||.|.+
T Consensus         2 n~L~~g~~L~~g--~~L~s--g~y~l~~q~DgN----Lvly~----~~~~vW~ant~~~~~~~~~L~l~~dGnLvL~d~~   69 (105)
T 4h3o_A            2 NILDNNEGLYAG--QSLDV--EPYHFIMQDDCN----LVLYD----HSTSTWASNTEIGGKSGCSAVLQSDGNFVVYDSS   69 (105)
T ss_dssp             CEECTTEEECTT--CEEEE--TTEEEEECTTSC----EEEEE----TTEEEEECCCCCTTCCSCEEEECTTSCEEEECTT
T ss_pred             CCcCCCCEEcCC--CEEEE--CCEEEEECCCCe----EEEEE----CCEEEEEecCCCCCCccEEEEEeCCccEEEECCC
Confidence            568899999865  67888  889999875543    44543    3689999999999988899999999999999999


Q ss_pred             CcEEEEeccc----ccccccCCCCcEEEEecCCceeecc
Q 047157          106 GSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDS  140 (788)
Q Consensus       106 ~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqS  140 (788)
                      ++..|.+++.    ..+|+|+|+|||||++.   .+|||
T Consensus        70 ~~~vWss~t~~~~~~~~l~L~ddGNlVly~~---~~W~S  105 (105)
T 4h3o_A           70 GRSLWASHSTRGSGNYILILQDDGNVIIYGS---DIWST  105 (105)
T ss_dssp             CCEEEECCCCCCSSCEEEEECTTSCEEEEES---EEEEC
T ss_pred             cEEEEEecCCCCCCCEEEEEeCCCeEEEECC---cEecC
Confidence            8875544332    24689999999999964   69998

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.65  E-value=3.8e-16  Score=138.49  Aligned_cols=106  Identities=19%  Similarity=0.379  Sum_probs=83.3

Q ss_pred             CCccCCCCceecCCCCeeecCCCeEEEeeeecCCCceEEEEEeCCCCCCeEEEEecCCCCCCCCcEEEEecCCceEEEeC
Q 047157           25 SPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYF  104 (788)
Q Consensus        25 ~~~i~~~~~l~~~~~~~~vS~~g~F~lGFf~~~~~~~y~giw~~~~~~~tvVWvANr~~p~~~~s~l~l~~~G~L~l~~~  104 (788)
                      +|+|.+||.|+.+  ++|  ++|.|+|+|+.+++-     +||++   +++||+||++.+ ..++.+.|..+|||||.| 
T Consensus         1 tdtl~~gq~L~~g--~~L--~~~~~~L~~~~dgnl-----vl~~~---~~~vW~sn~~~~-~~~~~l~l~~~GNLvl~d-   66 (112)
T 1xd5_A            1 SDRLNSGHQLDTG--GSL--AEGGYLFIIQNDCNL-----VLYDN---NRAVWASGTNGK-ASGCVLKMQNDGNLVIYS-   66 (112)
T ss_dssp             CCEEETTEEECTT--CEE--EETTEEEEECTTSCE-----EEEET---TEEEEECCCTTS-CSSEEEEECTTSCEEEEE-
T ss_pred             CCCCCCCCEECCC--CEE--eCCCEEEEEcCCCcE-----EEEEC---CEEEEeCCCcCC-CCCEEEEEeCCCCEEEEc-
Confidence            4789999999865  577  589999999987652     35665   699999999764 345689999999999999 


Q ss_pred             CCcEEEEeccc----ccccccCCCCcEEEEecCCceeecccCCC
Q 047157          105 NGSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDSFDFP  144 (788)
Q Consensus       105 ~~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqSFD~P  144 (788)
                      ++.+.|.+.+.    .-.++|+++|||||++..+.++||||+|.
T Consensus        67 ~~~~~W~S~~~~~~g~~~l~l~~dGnlvl~~~~~~~~W~S~~~~  110 (112)
T 1xd5_A           67 GSRAIWASNTNRQNGNYYLILQRDRNVVIYDNSNNAIWATHTNV  110 (112)
T ss_dssp             TTEEEEECCCCCSCCCCEEEECTTSCEEEECTTSCEEEECCCCC
T ss_pred             CCEEEEECCccCCCCCEEEEEeCCCcEEEECCCCceEEECCCcc
Confidence            66554332222    23688999999999997788999999985

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.52  E-value=3.8e-15  Score=159.83  Aligned_cols=141  Identities=11%  Similarity=0.104  Sum_probs=96.1

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchH--------------HHHH--------HHHHHHHHhcCCCcc
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE--------------KTNE--------EFMTELKIIGRTHHK  547 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~--------------~~~~--------~~~~E~~~l~~l~hp  547 (788)
                      |.+.+.||+|++|.||+|..   ..+..||||+++....              ....        ...+|...|.++.+.
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d---~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~  173 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVAD---EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE  173 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEEC---TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEecCEeeeCCceEEEEEEC---CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc
Confidence            56778999999999999986   3577999997642110              0011        123455666666444


Q ss_pred             ccc--eEeeEEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEec
Q 047157          548 NLV--RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLD  625 (788)
Q Consensus       548 niv--~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  625 (788)
                      ++.  ..+++    ...+|||||+++++|.++...       .....++.||+.+|.+||+.   +||||||||.|||++
T Consensus       174 gv~vp~p~~~----~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~  239 (397)
T 4gyi_A          174 GFPVPEPIAQ----SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIR  239 (397)
T ss_dssp             TCSCCCEEEE----ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE
T ss_pred             CCCCCeeeec----cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEe
Confidence            332  22221    123799999999888765421       12346889999999999998   999999999999998


Q ss_pred             cCCCCC-----CCcEEEeecCCccccC
Q 047157          626 LKTLDT-----NYMAKISDFGISKLLN  647 (788)
Q Consensus       626 ~~~~~~-----~~~~kL~Dfg~a~~~~  647 (788)
                      .++...     ...+.|+||+.+....
T Consensus       240 ~dgd~~d~~~~~~~~~iID~~Q~V~~~  266 (397)
T 4gyi_A          240 EEKDAEDPSSITLTPIIIXFPQMVSMD  266 (397)
T ss_dssp             EEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred             CCCCcccccccccceEEEEeCCcccCC
Confidence            432100     1148999999887644

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=99.51  E-value=4.7e-14  Score=124.10  Aligned_cols=99  Identities=16%  Similarity=0.339  Sum_probs=77.3

Q ss_pred             CccCCCCceecCCCCeeecCCCeEEEeeeecCCCceEEEEEeCCCCCCeEEEEecCCCCCCCCcEEEEecCCceEEEeCC
Q 047157           26 PNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFN  105 (788)
Q Consensus        26 ~~i~~~~~l~~~~~~~~vS~~g~F~lGFf~~~~~~~y~giw~~~~~~~tvVWvANr~~p~~~~s~l~l~~~G~L~l~~~~  105 (788)
                      .+|.+||.|..+  ++|+  +|.|+|+|+..++  ..|   |+.   .++||+||++.+ ..++.|.|..||||||.|.+
T Consensus         2 ntL~~gq~L~~g--~~L~--~g~~~L~~q~dGn--Lvl---y~~---~~~vW~snt~~~-~~~~~l~l~~dGNLvl~~~~   68 (109)
T 3dzw_A            2 NILYSGETLSPG--EFLN--NGRYVFIMQEDCN--LVL---YDV---DKPIWATNTGGL-DRRCHLSMQSDGNLVVYSPR   68 (109)
T ss_dssp             CEEETTEEECTT--CEEE--ETTEEEEECTTSC--EEE---EET---TEEEEECCCTTS-SSSCEEEECTTSCEEEECTT
T ss_pred             CCcCCCCEeCCC--CEEE--CCCEEEEEcCCCc--EEE---EeC---CEEEEECCcccC-CCCEEEEEeCCCCEEEECCC
Confidence            478899999865  5776  7999999976654  333   554   589999999876 34578999999999999988


Q ss_pred             CcEEEEeccc----ccccccCCCCcEEEEecCCceeecc
Q 047157          106 GSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDS  140 (788)
Q Consensus       106 ~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqS  140 (788)
                      +++.|.+.+.    ..+|+|+|+|||||+++   .+|||
T Consensus        69 ~~~~W~S~t~~~~~~~~~~L~ddGNlvly~~---~~W~s  104 (109)
T 3dzw_A           69 NNPIWASNTGGENGNYVCVLQKDRNVVIYGT---ARWAT  104 (109)
T ss_dssp             SCEEEECCCCCSSSCEEEEECTTSCEEEEES---CCCCC
T ss_pred             CCEEEECCCCCCCCCEEEEEeCCCEEEEECC---CEEeC
Confidence            8765433332    24689999999999985   89998

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.40  E-value=8.6e-13  Score=115.97  Aligned_cols=100  Identities=11%  Similarity=0.157  Sum_probs=74.6

Q ss_pred             CCCccCCCCceecCCCCeeecCCCeEEEeeeecCCCceEEEEEeCCCCCCeEEEEecCCCCCCCCcEEEEecCCceEEEe
Q 047157           24 TSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTY  103 (788)
Q Consensus        24 ~~~~i~~~~~l~~~~~~~~vS~~g~F~lGFf~~~~~~~y~giw~~~~~~~tvVWvANr~~p~~~~s~l~l~~~G~L~l~~  103 (788)
                      +.|+|.+||.|..+  ++|+|  |.|.|-| +..++   |.+ |..    ++||++|++.. ..++.+.|..||||||.|
T Consensus         5 ~~dtL~~gq~L~~g--~~L~s--g~~~L~~-q~dGn---Lvl-~~~----~~vW~snt~~~-~~~~~l~l~~dGNLvl~d   70 (110)
T 3r0e_B            5 TNNLLFSGQVLYGD--GRLTA--KNHQLVM-QGDCN---LVL-YGG----KYGWQSNTHGN-GEHCFLRLNHKGELIIKD   70 (110)
T ss_dssp             BTTEEETTCEEETT--EEEEC--SSCEEEE-CTTSC---EEE-ECS----SSCEECCCTTS-SSSCEEEECTTSCEEEEC
T ss_pred             ccCEECCCCEecCC--CEEEe--CCEEEEE-cCCCe---EEE-ECC----eEEEECCCcCC-CcCEEEEEeCCCcEEEEe
Confidence            56899999999965  68998  4588855 43333   333 654    48999999863 234689999999999999


Q ss_pred             CCCcEEEEeccc----ccccccCCCCcEEEEecCCceeecc
Q 047157          104 FNGSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDS  140 (788)
Q Consensus       104 ~~~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqS  140 (788)
                      .++++.|.+.+.    ..+|+|+|+|||||++   ..+|+|
T Consensus        71 ~~~~~iW~S~t~~~~~~~~~~L~~dGNlvly~---~~~W~t  108 (110)
T 3r0e_B           71 DDFKTIWSSRSSSKQGEYVLILQDDGFGVIYG---PAIFET  108 (110)
T ss_dssp             TTCCEEEECCCCCSSSCCEEEECTTSCEEEEC---SEEEES
T ss_pred             CCCCEEEEcCCcCCCCCEEEEEcCCccEEEec---CCEecC
Confidence            888765443331    1468999999999998   489987

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=99.38  E-value=4.9e-13  Score=117.68  Aligned_cols=86  Identities=21%  Similarity=0.371  Sum_probs=66.4

Q ss_pred             CCCcEEEEecCCceEEEeCCCcEEEEeccc----ccccccCCCCcEEEEecCCceeecccCCCCCcccCCccccCCCeEE
Q 047157           86 EAGSKITLTNDGKLLLTYFNGSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLY  161 (788)
Q Consensus        86 ~~~s~l~l~~~G~L~l~~~~~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqSFD~PtDtllpg~~l~~g~~l~  161 (788)
                      +...+|.+..||||+|.+ ++++.|..++.    ...++|+|+|||||++.++.++||||.                   
T Consensus        19 ~~~~~l~~~~dGnlvl~~-~~~~vW~sn~~~~~~~~~l~l~~dGNLVl~~~~~~~~W~S~t-------------------   78 (110)
T 3a0c_A           19 GPSYRLIMQGDCNFVLYD-SGKPVWASNTGGLGSGCRLTLHNNGNLVIYDQSNRVIWQTKT-------------------   78 (110)
T ss_dssp             TTTEEEEECTTSCEEEEE-TTEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECCC-------------------
T ss_pred             CCCEEEEEcCCCcEEEEE-CCEEEEECCCCCCCCcEEEEEeCCCCEEEECCCCcEEEecCC-------------------
Confidence            345789999999999998 45554443332    246899999999999999999999993                   


Q ss_pred             eecCCCCCCCCCceEEeeccCCcceeeecccCCCCCcccCcc
Q 047157          162 SNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTV  203 (788)
Q Consensus       162 s~~~~~~dps~G~~~~~~~~~g~~~~~~~~~~~~~yw~~~~~  203 (788)
                             ++++|.|++.|+++|++.++  ..   .||.+++.
T Consensus        79 -------~~~~g~~~l~l~~dGnlvl~--~~---~~W~S~~~  108 (110)
T 3a0c_A           79 -------NGKEDHYVLVLQQDRNVVIY--GP---VVWATGSG  108 (110)
T ss_dssp             -------CCSSSCCEEEECTTSCEEEE--CS---EEEECSCC
T ss_pred             -------CCCCCCEEEEEeCCccEEEE--CC---CEecCCCc
Confidence                   45569999999999986653  22   59988653

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.35  E-value=6.3e-12  Score=111.11  Aligned_cols=103  Identities=13%  Similarity=0.185  Sum_probs=77.6

Q ss_pred             CCCccCCCCceecCCCCeeecCCCeEEEeeeecCCCceEEEEEeCCCCCCeEEEEecCCCCCCCCcEEEEecCCceEEEe
Q 047157           24 TSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTY  103 (788)
Q Consensus        24 ~~~~i~~~~~l~~~~~~~~vS~~g~F~lGFf~~~~~~~y~giw~~~~~~~tvVWvANr~~p~~~~s~l~l~~~G~L~l~~  103 (788)
                      +.++|.+||.|..+  ++|.  +|.|.|-|...++    |.++..+  ..++||++|+..+- .++.+.|..+|||||.|
T Consensus         5 ~~~tL~~gq~L~~g--~~L~--~g~~~L~~q~dGN----LvL~~~~--~~~~vWssnt~~~~-~~~~l~l~~dGNLVl~d   73 (113)
T 3mez_B            5 VRNVLFSSQVMYDN--AQLA--TRDYSLVMRDDCN----LVLTKGS--KTNIVWESGTSGRG-QHCFMRLGHSGELDITD   73 (113)
T ss_dssp             CSSEEETTCEEETT--CEEE--ETTEEEEECTTSC----EEEEETT--TTEEEEECCCTTSC-SSCEEEECTTSCEEEEC
T ss_pred             cCCEeCCCCEECCC--CEeE--cCCEEEEEcCCCE----EEEEECC--CCEEEEECCcccCC-cCEEEEEeCCCcEEEEC
Confidence            56789999999865  5676  4889988864433    4444321  47899999998763 35689999999999999


Q ss_pred             CCCcEEEEeccc----ccccccCCCCcEEEEecCCceeecc
Q 047157          104 FNGSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDS  140 (788)
Q Consensus       104 ~~~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqS  140 (788)
                      .++++.|.+++.    ..+|+|+|+|||||++   ..+|+|
T Consensus        74 ~~~~~iW~S~t~~~~~~~~~~L~~dGnlvly~---~~~W~s  111 (113)
T 3mez_B           74 DRLNTVFVSNTVGQEGDYVLILQINGQAVVYG---PAVWST  111 (113)
T ss_dssp             TTSCEEEECSCCCSSSCCEEEECTTSCEEEEC---SEEEES
T ss_pred             CCCCEEEECCCcCCCCCEEEEEcCCceEEEec---CCEecC
Confidence            888764443332    1468999999999997   689997

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.34  E-value=2.8e-12  Score=113.44  Aligned_cols=88  Identities=31%  Similarity=0.430  Sum_probs=68.0

Q ss_pred             CcEEEEecCCceEEEeCCCcEEEEeccc----ccccccCCCCcEEEEecCCceeecccCCCCCcccCCccccCCCeEEee
Q 047157           88 GSKITLTNDGKLLLTYFNGSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSN  163 (788)
Q Consensus        88 ~s~l~l~~~G~L~l~~~~~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqSFD~PtDtllpg~~l~~g~~l~s~  163 (788)
                      ..+|.+..||||+|.+. +++.|..++.    ..+++|+++|||||++ ++.++||||+                     
T Consensus        20 ~~~L~~~~dgnlvl~~~-~~~vW~sn~~~~~~~~~l~l~~~GNLvl~d-~~~~~W~S~~---------------------   76 (112)
T 1xd5_A           20 GYLFIIQNDCNLVLYDN-NRAVWASGTNGKASGCVLKMQNDGNLVIYS-GSRAIWASNT---------------------   76 (112)
T ss_dssp             TEEEEECTTSCEEEEET-TEEEEECCCTTSCSSEEEEECTTSCEEEEE-TTEEEEECCC---------------------
T ss_pred             CEEEEEcCCCcEEEEEC-CEEEEeCCCcCCCCCEEEEEeCCCCEEEEc-CCEEEEECCc---------------------
Confidence            45899999999999886 5554443332    2478999999999999 8889999994                     


Q ss_pred             cCCCCCCCCCceEEeeccCCcceeeecccCCCCCcccCcccc
Q 047157          164 SRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTL  205 (788)
Q Consensus       164 ~~~~~dps~G~~~~~~~~~g~~~~~~~~~~~~~yw~~~~~~~  205 (788)
                           ||++|.|++.|+++|++.+  +......||.++++.+
T Consensus        77 -----~~~~g~~~l~l~~dGnlvl--~~~~~~~~W~S~~~~g  111 (112)
T 1xd5_A           77 -----NRQNGNYYLILQRDRNVVI--YDNSNNAIWATHTNVG  111 (112)
T ss_dssp             -----CCSCCCCEEEECTTSCEEE--ECTTSCEEEECCCCCC
T ss_pred             -----cCCCCCEEEEEeCCCcEEE--ECCCCceEEECCCccC
Confidence                 3456899999999998655  3334457999988754

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=99.33  E-value=4e-12  Score=113.34  Aligned_cols=82  Identities=26%  Similarity=0.359  Sum_probs=64.7

Q ss_pred             cEEEEecCCceEEEeCCCcEEEEeccc----ccccccCCCCcEEEEecCCceeecccCCCCCcccCCccccCCCeEEeec
Q 047157           89 SKITLTNDGKLLLTYFNGSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNS  164 (788)
Q Consensus        89 s~l~l~~~G~L~l~~~~~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqSFD~PtDtllpg~~l~~g~~l~s~~  164 (788)
                      .+|.+..||||+|.+. +++.|..++.    ...++|+|+|||||+|.++.++||||.                      
T Consensus        32 ~~L~~~~dgnlvly~~-~~~vW~sn~~~~~~~~~l~l~~dGNLVl~d~~~~~lW~S~~----------------------   88 (119)
T 1b2p_A           32 YRFIMQTDCNLVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVITNENVTVWQSPV----------------------   88 (119)
T ss_dssp             EEEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECSC----------------------
T ss_pred             EEEEEecCCCEEEEEC-CEEEEeCCCccCCCceEEEEccCCEEEEEeCCCcEEEcCCC----------------------
Confidence            4788899999999886 5554443332    247899999999999999999999993                      


Q ss_pred             CCCCCCCCCceEEeeccCCcceeeecccCCCCCcccCc
Q 047157          165 RGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGT  202 (788)
Q Consensus       165 ~~~~dps~G~~~~~~~~~g~~~~~~~~~~~~~yw~~~~  202 (788)
                          ||++|.|++.++++|++.++  .   ..||.+++
T Consensus        89 ----~~~~g~~~l~l~~~Gnlvl~--~---~~~W~Sg~  117 (119)
T 1b2p_A           89 ----AGKAGHYVLVLQPDRNVVIY--G---DALWATQT  117 (119)
T ss_dssp             ----CCCSSCEEEEECTTSCEEEE--E---SEEEECCC
T ss_pred             ----CCCCCCEEEEEECCCcEEEE--C---ccEeCCCC
Confidence                45679999999999986553  2   26998875

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.22  E-value=1.1e-11  Score=108.71  Aligned_cols=104  Identities=19%  Similarity=0.314  Sum_probs=77.1

Q ss_pred             CCCccCCCCceecCCCCeeecCCCeEEEeeeecCCCceEEEEEeCCCCCCeEEEEecCCCCCCCCcEEEEecCCceEEEe
Q 047157           24 TSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTY  103 (788)
Q Consensus        24 ~~~~i~~~~~l~~~~~~~~vS~~g~F~lGFf~~~~~~~y~giw~~~~~~~tvVWvANr~~p~~~~s~l~l~~~G~L~l~~  103 (788)
                      +.++|.+||.|..+  ++|  .+|.|.|.|...++--.     |..      +|.+|+..+ ..++.|+|..||||||.|
T Consensus         2 ~~dtL~~gq~L~~g--~~L--~~g~~~L~~q~dGNLvl-----~~~------~Wssnt~~~-~~~~~l~l~~dGnLvl~d   65 (109)
T 3r0e_A            2 GTNYLLSGQTLDTE--GHL--KNGDFDLVMQDDCNLVL-----YNG------NWQSNTANN-GRDCKLTLTDYGELVIKN   65 (109)
T ss_dssp             CCSEEETTCEECTT--CEE--EETTEEEEECTTSCEEE-----ETT------TEECCCTTS-CSSCEEEECTTSCEEEEC
T ss_pred             ccCCcCCCCCcCCC--CEe--ECCCEEEEEecCCeEEE-----EeC------eEEcCCCCC-CCcEEEEEcCCCeEEEEe
Confidence            46789999999865  567  57999999865443212     332      699998765 345789999999999999


Q ss_pred             CCCcEEEEeccc----ccccccCCCCcEEEEecCCceeecccCCCCCcccCC
Q 047157          104 FNGSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPG  151 (788)
Q Consensus       104 ~~~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqSFD~PtDtllpg  151 (788)
                      .+++..|..++.    ..+|+|+|+|||||++   ..+|+|     .|.+||
T Consensus        66 ~~~~~vWss~t~~~~~~~~~~L~~dGNlvly~---~~~W~s-----~t~~~~  109 (109)
T 3r0e_A           66 GDGSTVWKSGAQSVKGNYAAVVHPDGRLVVFG---PSVFKI-----DPWVRG  109 (109)
T ss_dssp             TTSCEEEECCCCCSSSCCEEEEETTTEEEEEC---SEEEEE-----CTTSCC
T ss_pred             CCCCEEEcCCCcCCCcCEEEEEcCCCeEEEEe---cCEECC-----CCccCC
Confidence            888765433332    2468999999999997   689998     555554

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=99.22  E-value=2.6e-11  Score=107.72  Aligned_cols=87  Identities=25%  Similarity=0.370  Sum_probs=67.1

Q ss_pred             CCcEEEEecCCceEEEeCCCcEEEEeccc----ccccccCCCCcEEEEecCCceeecccCCCCCcccCCccccCCCeEEe
Q 047157           87 AGSKITLTNDGKLLLTYFNGSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYS  162 (788)
Q Consensus        87 ~~s~l~l~~~G~L~l~~~~~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqSFD~PtDtllpg~~l~~g~~l~s  162 (788)
                      ....|.+..||||+|.+ .+++.|..++.    ...++|+++|||||++.++.++|||||+|                  
T Consensus        20 g~~~L~~~~dgnlvly~-~~~~vW~sn~~~~~~~~~l~l~~~GnLvl~d~~~~~vW~S~~~~------------------   80 (115)
T 2dpf_A           20 GAYTLTIQNKCNLVKYQ-NGRQIWASNTDRRGSGCRLTLLSDGNLVIYDHNNNDVWGSACWG------------------   80 (115)
T ss_dssp             TTEEEEECTTSCEEEEE-TTEEEEECSCTTSCSSCEEEECTTSCEEEECTTCCEEEECCCCC------------------
T ss_pred             CCEEEEEcCCCcEEEEe-CCEEEEeCCCCCCCCceEEEECCCCcEEEECCCceEEEEcCCCC------------------
Confidence            34578888999999987 45554443332    24688999999999998889999999973                  


Q ss_pred             ecCCCCCCCCCceEEeeccCCcceeeecccCCCCCcccCcccc
Q 047157          163 NSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTL  205 (788)
Q Consensus       163 ~~~~~~dps~G~~~~~~~~~g~~~~~~~~~~~~~yw~~~~~~~  205 (788)
                              ++|.|++.++++|++.++  ..   .||.+++|..
T Consensus        81 --------~~g~~~l~l~~dGnlvl~--~~---~~W~S~~~~~  110 (115)
T 2dpf_A           81 --------DNGKYALVLQKDGRFVIY--GP---VLWSLGPNGC  110 (115)
T ss_dssp             --------SSSCCEEEECTTSCEEEE--CS---EEECSSTTCB
T ss_pred             --------CCCCEEEEEeCCCeEEEE--CC---CEEECCCCCC
Confidence                    358899999999986653  22   6999988754

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.09  E-value=2.5e-10  Score=117.74  Aligned_cols=140  Identities=16%  Similarity=0.070  Sum_probs=107.5

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC-ccccceEeeEEecCCeEEEEEec
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      +.+...++.|+.+.||++..    .+..+++|............+.+|+++++.+. |..++++++++.+.+..++|||+
T Consensus        16 ~~~~~~~~g~s~~~v~~~~~----~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~   91 (263)
T 3tm0_A           16 YRCVKDTEGMSPAKVYKLVG----ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE   91 (263)
T ss_dssp             SEEEECCSCCSSSEEEEEEC----SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred             ceeEeeccCCCCCeEEEEEC----CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEe
Confidence            55567788888899998853    24589999886532222346788999998884 67888999999998999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcc----------------------------------------
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC----------------------------------------  608 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~----------------------------------------  608 (788)
                      ++|.+|.+.+..      ......++.+++++|+.||+..                                        
T Consensus        92 i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (263)
T 3tm0_A           92 ADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFK  165 (263)
T ss_dssp             CSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSS
T ss_pred             cCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCC
Confidence            999999876421      1223468889999999999810                                        


Q ss_pred             ----------------CCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          609 ----------------ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       609 ----------------~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                                      ...++|+|++|.||+++     +...+.|+||+.+.
T Consensus       166 ~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~-----~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          166 DPRELYDFLKTEKPEEELVFSHGDLGDSNIFVK-----DGKVSGFIDLGRSG  212 (263)
T ss_dssp             SHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEE-----TTEEEEECCCTTCE
T ss_pred             CHHHHHHHHHhcCCCCCceEECCCCCcCcEEEE-----CCcEEEEEEchhcc
Confidence                            13699999999999997     55556799998775

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=98.99  E-value=6.8e-10  Score=97.55  Aligned_cols=99  Identities=14%  Similarity=0.258  Sum_probs=72.5

Q ss_pred             CCccCCCCceecCCCCeeecCCCeEEEeeeecCCCceEEEEEeCCCCCCeEEEEecCCCCCCCCcEEEEecCCceEEEeC
Q 047157           25 SPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYF  104 (788)
Q Consensus        25 ~~~i~~~~~l~~~~~~~~vS~~g~F~lGFf~~~~~~~y~giw~~~~~~~tvVWvANr~~p~~~~s~l~l~~~G~L~l~~~  104 (788)
                      .++|.+||.|..+  ++|  .+|.|.|-|...++  .-|   |..   .. ||.+|+..+ ..++.+.|..+|||||.|.
T Consensus         2 ~~~l~~gq~L~~g--~~L--~~g~~~L~~q~dGn--Lvl---~~~---~~-vW~snt~~~-~~~~~l~l~~dGNLVl~~~   67 (111)
T 3mez_A            2 NNVLLTGDVIHTD--NQL--SYESAAFVMQGDCN--LVL---YNE---AG-GFQSNTHGR-GVDCTLRLNNRGQLEIHSA   67 (111)
T ss_dssp             TTEEETTCEECTT--CEE--EETTEEEEECTTSC--EEE---ECS---SC-CEECCCTTS-CSSCEEEECTTSCEEEECS
T ss_pred             cCEeCCCCEeCCC--CEE--ecCCEEEEEccCCe--EEE---ECC---CC-EEECCcccC-CcCEEEEEcCCCcEEEEeC
Confidence            4689999999865  566  37899999854432  222   443   23 999999876 3357899999999999998


Q ss_pred             CCcE-EEEeccc------ccccccCCCCcEEEEecCCceeecc
Q 047157          105 NGSV-QQIYSGA------ASLALMQNDGNFVLKNANSAVVWDS  140 (788)
Q Consensus       105 ~~~~-~~~~s~~------~~~a~LldsGNlVl~~~~~~~lWqS  140 (788)
                      +++. .|.+.+.      ..+++|+++|||||++   ..+|+|
T Consensus        68 ~~~~~vW~S~t~~~~~~~~~~l~Lq~dGNlvly~---~~~W~s  107 (111)
T 3mez_A           68 NSNTPVWVYPRSVNTVRGNYAATLGPDQHVTIYG---PAIWST  107 (111)
T ss_dssp             SCSSCSEEESSSCCCCSSCCEEEECTTSCEEEEC---SEEEEC
T ss_pred             CCCEEEEEeccccCCCCcCEEEEECCCCeEEEec---cCEEcc
Confidence            7754 4433321      2368999999999997   689997

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=98.90  E-value=6.5e-09  Score=106.89  Aligned_cols=109  Identities=16%  Similarity=0.318  Sum_probs=80.2

Q ss_pred             cCCCccCCCCc----eecCCCCeeecCCCeEEEeeeecC---CCceEEEEEeCCCCCCeEEEEecCCCCCCCCcEEEEec
Q 047157           23 QTSPNISLGSS----ITAGSNTSWLSPSGDFAFGFYSLF---GGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTN   95 (788)
Q Consensus        23 ~~~~~i~~~~~----l~~~~~~~~vS~~g~F~lGFf~~~---~~~~y~giw~~~~~~~tvVWvANr~~p~~~~s~l~l~~   95 (788)
                      ..+||+.+|+.    |..+  ++|+|+ ..++.|+|+..   .+..+|   |++  ..+++|.+++..+-.  ..+.+..
T Consensus       134 ~ptdtlLpg~~~~~~l~~g--~~L~S~-~dps~G~fsl~l~~dGnlvL---y~~--~~~~yW~Sgt~~~~~--~~l~l~~  203 (276)
T 3m7h_A          134 TPAIPLVPGAIDSLLLAPG--SELVQG-VVYGAGASKLVFQGDGNLVA---YGP--NGAATWNAGTQGKGA--VRAVFQG  203 (276)
T ss_dssp             CTTSCCCCSCTTCEEECSS--EEECTT-CEEEETTEEEEECTTSCEEE---ECT--TSSEEEECCCTTTTC--CEEEECT
T ss_pred             ccccccccccccccccccC--cccccC-CCCCCceEEEeecCCceEEE---EeC--CCeEEEECCCCCCcc--EEEEEcC
Confidence            56788999998    7643  567664 57788877652   333443   332  268999999987632  6889999


Q ss_pred             CCceEEEeCCCcEEEEeccc---ccccccCCCCcEEEEecCCceeecccCC
Q 047157           96 DGKLLLTYFNGSVQQIYSGA---ASLALMQNDGNFVLKNANSAVVWDSFDF  143 (788)
Q Consensus        96 ~G~L~l~~~~~~~~~~~s~~---~~~a~LldsGNlVl~~~~~~~lWqSFD~  143 (788)
                      +|+|++.|.++...|...+.   ...++|+++|||||++.  +.+||||||
T Consensus       204 dGnLvl~d~~~~~vWsS~t~~~~~~rl~Ld~dGnLvly~~--~~~Wqsf~~  252 (276)
T 3m7h_A          204 DGNLVVYGAGNAVLWHSHTGGHASAVLRLQANGSIAILDE--KPVWARFGF  252 (276)
T ss_dssp             TSCEEEECTTSCEEEECSCTTCTTCEEEECTTSCEEEEEE--EEEEESSSC
T ss_pred             CCeEEEEeCCCcEEEEecCCCCCCEEEEEcCCccEEEEcC--CCeEEccCc
Confidence            99999999877554433221   35789999999999986  689999997

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=98.90  E-value=3.1e-09  Score=93.71  Aligned_cols=89  Identities=18%  Similarity=0.312  Sum_probs=64.4

Q ss_pred             CCCCC-CCcEEEEecCCceEEEeCC-CcEEEEeccc----ccccccCCCCcEEEEecCCceeecccCCCCCcccCCcccc
Q 047157           82 DSPAE-AGSKITLTNDGKLLLTYFN-GSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLL  155 (788)
Q Consensus        82 ~~p~~-~~s~l~l~~~G~L~l~~~~-~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqSFD~PtDtllpg~~l~  155 (788)
                      +.|+. ....|.+..||||||.+.+ ++..|..++.    ...++|+++|||||++.++.++|||-.+            
T Consensus        18 g~~L~~g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~~~~iW~S~t~------------   85 (113)
T 3mez_B           18 NAQLATRDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNTVFVSNTV------------   85 (113)
T ss_dssp             TCEEEETTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTTSCEEEECSCC------------
T ss_pred             CCEeEcCCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCCCCEEEECCCc------------
Confidence            34443 3458999999999999873 6655544332    2468999999999999988999998321            


Q ss_pred             CCCeEEeecCCCCCCCCCceEEeeccCCcceeeecccCCCCCcccC
Q 047157          156 TGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTG  201 (788)
Q Consensus       156 ~g~~l~s~~~~~~dps~G~~~~~~~~~g~~~~~~~~~~~~~yw~~~  201 (788)
                                   . ..|.|.+.++.+|++.++.     ...|.++
T Consensus        86 -------------~-~~~~~~~~L~~dGnlvly~-----~~~W~s~  112 (113)
T 3mez_B           86 -------------G-QEGDYVLILQINGQAVVYG-----PAVWSTA  112 (113)
T ss_dssp             -------------C-SSSCCEEEECTTSCEEEEC-----SEEEESC
T ss_pred             -------------C-CCCCEEEEEcCCceEEEec-----CCEecCC
Confidence                         0 1256899999999988753     4578765

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.85  E-value=2.9e-09  Score=109.39  Aligned_cols=128  Identities=16%  Similarity=0.115  Sum_probs=94.1

Q ss_pred             cccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccc--cceEeeEEecCCeEEEEEecCCCCCH
Q 047157          497 GTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKN--LVRLLGFCSEEDKRLLVYELMPNGTL  574 (788)
Q Consensus       497 g~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpn--iv~~~~~~~~~~~~~lV~e~~~~gsL  574 (788)
                      +.|..+.||++..   .++..+++|.....   ....+.+|+++++.+.+.+  +++++++...++..++||||++|.+|
T Consensus        29 ~gg~~~~v~~~~~---~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l  102 (264)
T 1nd4_A           29 IGCSDAAVFRLSA---QGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL  102 (264)
T ss_dssp             CTTSSCEEEEEEC---TTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             cCCCCceEEEEec---CCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence            4556699999854   34557899987543   2245678888888885434  56789988888889999999999888


Q ss_pred             hHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcc----------------------------------------------
Q 047157          575 SNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC----------------------------------------------  608 (788)
Q Consensus       575 ~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~----------------------------------------------  608 (788)
                      .  ..    ..+   ...++.++++.|..||+..                                              
T Consensus       103 ~--~~----~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (264)
T 1nd4_A          103 L--SS----HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR  173 (264)
T ss_dssp             T--TS----CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred             C--cC----cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHH
Confidence            4  21    111   2357788888888888742                                              


Q ss_pred             ---------CCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          609 ---------ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       609 ---------~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                               ...++|+|++|.||+++     ++..+.|+||+.+.
T Consensus       174 l~~~~~~~~~~~l~HgDl~~~Nil~~-----~~~~~~liD~~~a~  213 (264)
T 1nd4_A          174 LKARMPDGEDLVVTHGDACLPNIMVE-----NGRFSGFIDCGRLG  213 (264)
T ss_dssp             HHHTCCSSCCEEEECSSCCGGGEEEE-----TTEEEEECCCTTCE
T ss_pred             HHHhcCCCCCeEEECCCCCCCcEEEE-----CCcEEEEEcchhcc
Confidence                     12399999999999997     55566799999875

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=98.80  E-value=1.1e-08  Score=89.91  Aligned_cols=84  Identities=21%  Similarity=0.332  Sum_probs=62.2

Q ss_pred             CcEEEEecCCceEEEeCCCcEEEEeccc----ccccccCCCCcEEEEecCCc-eeecccCCCCCcccCCccccCCCeEEe
Q 047157           88 GSKITLTNDGKLLLTYFNGSVQQIYSGA----ASLALMQNDGNFVLKNANSA-VVWDSFDFPTDTILPGQVLLTGKKLYS  162 (788)
Q Consensus        88 ~s~l~l~~~G~L~l~~~~~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~-~lWqSFD~PtDtllpg~~l~~g~~l~s  162 (788)
                      ...|.+..||||||.+.++  .|..++.    ...++|+++|||||++.++. ++|||.-+                   
T Consensus        21 ~~~L~~q~dGnLvl~~~~~--vW~snt~~~~~~~~l~l~~dGNLVl~~~~~~~~vW~S~t~-------------------   79 (111)
T 3mez_A           21 SAAFVMQGDCNLVLYNEAG--GFQSNTHGRGVDCTLRLNNRGQLEIHSANSNTPVWVYPRS-------------------   79 (111)
T ss_dssp             TEEEEECTTSCEEEECSSC--CEECCCTTSCSSCEEEECTTSCEEEECSSCSSCSEEESSS-------------------
T ss_pred             CEEEEEccCCeEEEECCCC--EEECCcccCCcCEEEEEcCCCcEEEEeCCCCEEEEEeccc-------------------
Confidence            4589999999999998766  3333332    24688999999999998776 59999621                   


Q ss_pred             ecCCCCCCCCCceEEeeccCCcceeeecccCCCCCcccCc
Q 047157          163 NSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGT  202 (788)
Q Consensus       163 ~~~~~~dps~G~~~~~~~~~g~~~~~~~~~~~~~yw~~~~  202 (788)
                           .....|.|.+.++.+|++.++.     +.+|.+++
T Consensus        80 -----~~~~~~~~~l~Lq~dGNlvly~-----~~~W~s~t  109 (111)
T 3mez_A           80 -----VNTVRGNYAATLGPDQHVTIYG-----PAIWSTPA  109 (111)
T ss_dssp             -----CCCCSSCCEEEECTTSCEEEEC-----SEEEECCC
T ss_pred             -----cCCCCcCEEEEECCCCeEEEec-----cCEEccCC
Confidence                 0113478999999999988763     56898765

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.78  E-value=1.9e-08  Score=108.73  Aligned_cols=142  Identities=14%  Similarity=0.214  Sum_probs=103.2

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecc--cch-HHHHHHHHHHHHHhcCCC--ccccceEeeEEecC---CeEEEE
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLE--KDI-EKTNEEFMTELKIIGRTH--HKNLVRLLGFCSEE---DKRLLV  565 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~--~~~-~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~---~~~~lV  565 (788)
                      +.|+.|.++.||+....   + ..+++|+..  ... ......+.+|.++++.+.  +..+++++.++.+.   +..++|
T Consensus        44 ~~l~~G~sn~~y~v~~~---~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v  119 (359)
T 3dxp_A           44 EQFKGGQSNPTFKLVTP---G-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI  119 (359)
T ss_dssp             EECCC-CCSCEEEEECS---S-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred             EEcCCcccceEEEEEEC---C-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence            57899999999987653   2 467788775  321 123456788999998886  45688999988776   458999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcc-------------------------------------
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC-------------------------------------  608 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-------------------------------------  608 (788)
                      |||++|..+.+..   -..++..++..++.++++.|+.||...                                     
T Consensus       120 me~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (359)
T 3dxp_A          120 MEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA  196 (359)
T ss_dssp             EECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred             EEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence            9999998875422   134677888899999999999999731                                     


Q ss_pred             ------------------CCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          609 ------------------ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       609 ------------------~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                                        ...++|+|+++.|||++.++   ...+.|+||+.+..
T Consensus       197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~---~~v~~viDwe~a~~  248 (359)
T 3dxp_A          197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTE---PRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSS---SCEEEECCCTTCEE
T ss_pred             HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCC---CcEEEEECcccccc
Confidence                              25799999999999998321   12368999998874

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=98.71  E-value=5.8e-08  Score=84.99  Aligned_cols=84  Identities=26%  Similarity=0.355  Sum_probs=62.2

Q ss_pred             CCcEEEEecCCceEEEeCCCcEEEEeccc----ccccccCCCCcEEEEecCCceeecccCCCCCcccCCccccCCCeEEe
Q 047157           87 AGSKITLTNDGKLLLTYFNGSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYS  162 (788)
Q Consensus        87 ~~s~l~l~~~G~L~l~~~~~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqSFD~PtDtllpg~~l~~g~~l~s  162 (788)
                      ....|.+..||||+|.+. +++.|..++.    ...+.|+++|||||++.++.++|||....                  
T Consensus        19 g~~~L~~q~dGnLvly~~-~~~vW~snt~~~~~~~~l~l~~dGNLvl~~~~~~~~W~S~t~~------------------   79 (109)
T 3dzw_A           19 GRYVFIMQEDCNLVLYDV-DKPIWATNTGGLDRRCHLSMQSDGNLVVYSPRNNPIWASNTGG------------------   79 (109)
T ss_dssp             TTEEEEECTTSCEEEEET-TEEEEECCCTTSSSSCEEEECTTSCEEEECTTSCEEEECCCCC------------------
T ss_pred             CCEEEEEcCCCcEEEEeC-CEEEEECCcccCCCCEEEEEeCCCCEEEECCCCCEEEECCCCC------------------
Confidence            346899999999999886 5554443332    24679999999999999889999985211                  


Q ss_pred             ecCCCCCCCCCceEEeeccCCcceeeecccCCCCCcccCc
Q 047157          163 NSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGT  202 (788)
Q Consensus       163 ~~~~~~dps~G~~~~~~~~~g~~~~~~~~~~~~~yw~~~~  202 (788)
                              ..+.|.+.++.+|++.++.     ...|.+++
T Consensus        80 --------~~~~~~~~L~ddGNlvly~-----~~~W~s~t  106 (109)
T 3dzw_A           80 --------ENGNYVCVLQKDRNVVIYG-----TARWATGT  106 (109)
T ss_dssp             --------SSSCEEEEECTTSCEEEEE-----SCCCCCCC
T ss_pred             --------CCCCEEEEEeCCCEEEEEC-----CCEEeCCC
Confidence                    1256889999999988653     25787765

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.63  E-value=8.8e-09  Score=108.60  Aligned_cols=184  Identities=17%  Similarity=0.208  Sum_probs=120.4

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCC-Cccc--cceEeeEEecCC---eEEEEEe
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRT-HHKN--LVRLLGFCSEED---KRLLVYE  567 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~hpn--iv~~~~~~~~~~---~~~lV~e  567 (788)
                      +.++.|....||+..       ..+++|.....  .....+.+|.++++.+ .+..  +.+++......+   ..|+|||
T Consensus        26 ~~~~~G~~n~v~~v~-------~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~   96 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN-------RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT   96 (304)
T ss_dssp             CEEEECSSEEEEEST-------TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred             EecCCCCcceEEEEC-------CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence            457889999999751       35778876532  3456788999999877 3332  455655544333   3488999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhc----------------------------------------
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE----------------------------------------  607 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~----------------------------------------  607 (788)
                      +++|.+|.+...   ..++..++..++.++++.|+.||..                                        
T Consensus        97 ~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  173 (304)
T 3sg8_A           97 KIKGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV  173 (304)
T ss_dssp             CCCCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred             ccCCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence            999988875432   2456777788888999999888861                                        


Q ss_pred             ---------------cCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCcccccccCCccc---cCcccc
Q 047157          608 ---------------CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY---VAPEWL  669 (788)
Q Consensus       608 ---------------~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y---~aPE~~  669 (788)
                                     ..+.++|+|++|.||+++.+   ....+.|+||+.+...........     ....   ..|+..
T Consensus       174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~---~~~~~~~iD~~~~~~~~~~~Dl~~-----~~~~~~~~~~~~~  245 (304)
T 3sg8_A          174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTE---KNTICGIIDFGDAAISDPDNDFIS-----LMEDDEEYGMEFV  245 (304)
T ss_dssp             HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETT---TTEEEEECCCTTCEEECTTHHHHT-----TCCTTTSCCHHHH
T ss_pred             HHHHHHHHhccccccCCceeEeCCCCcccEEEeCC---CCCEEEEEeCCCCccCChHHHHHH-----HHhhccccCHHHH
Confidence                           11458999999999999821   145688999998875422111000     0011   222221


Q ss_pred             cC-----CC---------CCccCcchhhHHHHHHHHhCCCCC
Q 047157          670 RN-----VP---------VTTKVDVFSFGVMLLEIICGRRHI  697 (788)
Q Consensus       670 ~~-----~~---------~s~k~DVwSlGvil~elltg~~p~  697 (788)
                      ..     ..         .....+.|+++.++|.+.+|..+|
T Consensus       246 ~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          246 SKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence            10     00         112258999999999999998765

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=98.61  E-value=9e-08  Score=83.78  Aligned_cols=81  Identities=20%  Similarity=0.329  Sum_probs=59.4

Q ss_pred             CcEEEEecCCceEEEeCCCcEEEEeccc----ccccccCCCCcEEEEecCCceeecccCCCCCcccCCccccCCCeEEee
Q 047157           88 GSKITLTNDGKLLLTYFNGSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSN  163 (788)
Q Consensus        88 ~s~l~l~~~G~L~l~~~~~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqSFD~PtDtllpg~~l~~g~~l~s~  163 (788)
                      +..|.+..||||+|.+.  +..|..++.    ...++|+++|||||++.++.++|||-.+-                   
T Consensus        25 ~~~L~~q~dGnLvl~~~--~~vW~snt~~~~~~~~l~l~~dGNLvl~d~~~~~iW~S~t~~-------------------   83 (110)
T 3r0e_B           25 NHQLVMQGDCNLVLYGG--KYGWQSNTHGNGEHCFLRLNHKGELIIKDDDFKTIWSSRSSS-------------------   83 (110)
T ss_dssp             SCEEEECTTSCEEEECS--SSCEECCCTTSSSSCEEEECTTSCEEEECTTCCEEEECCCCC-------------------
T ss_pred             CEEEEEcCCCeEEEECC--eEEEECCCcCCCcCEEEEEeCCCcEEEEeCCCCEEEEcCCcC-------------------
Confidence            46889999999999875  343433332    13688999999999999899999994210                   


Q ss_pred             cCCCCCCCCCceEEeeccCCcceeeecccCCCCCcccC
Q 047157          164 SRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTG  201 (788)
Q Consensus       164 ~~~~~dps~G~~~~~~~~~g~~~~~~~~~~~~~yw~~~  201 (788)
                             ..|.|.+.++.+|++.++.     +..|.++
T Consensus        84 -------~~~~~~~~L~~dGNlvly~-----~~~W~t~  109 (110)
T 3r0e_B           84 -------KQGEYVLILQDDGFGVIYG-----PAIFETS  109 (110)
T ss_dssp             -------SSSCCEEEECTTSCEEEEC-----SEEEESC
T ss_pred             -------CCCCEEEEEcCCccEEEec-----CCEecCC
Confidence                   1356889999999988753     3567765

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=98.38  E-value=1e-06  Score=76.93  Aligned_cols=94  Identities=27%  Similarity=0.415  Sum_probs=67.7

Q ss_pred             CCcccCCccccCCCeEEeecCCCCCCCCCceEEeeccCCcceeeecccCCCCCcccCcccc-cceeeeeccceeEEEEec
Q 047157          145 TDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTL-NNVSLIFNQSAFMYLINS  223 (788)
Q Consensus       145 tDtllpg~~l~~g~~l~s~~~~~~dps~G~~~~~~~~~g~~~~~~~~~~~~~yw~~~~~~~-~~~~~~~~~~~~~~~~~~  223 (788)
                      +|||+|||.|..|..|.          .|.|.|.|+.+|++.++.      .||.+.+... .+..+.+..++.+++++.
T Consensus         3 ~dtL~~gq~L~~g~~L~----------~g~~~L~~q~dGNLvl~~------~~Wssnt~~~~~~~~l~l~~dGnLvl~d~   66 (109)
T 3r0e_A            3 TNYLLSGQTLDTEGHLK----------NGDFDLVMQDDCNLVLYN------GNWQSNTANNGRDCKLTLTDYGELVIKNG   66 (109)
T ss_dssp             CSEEETTCEECTTCEEE----------ETTEEEEECTTSCEEEET------TTEECCCTTSCSSCEEEECTTSCEEEECT
T ss_pred             cCCcCCCCCcCCCCEeE----------CCCEEEEEecCCeEEEEe------CeEEcCCCCCCCcEEEEEcCCCeEEEEeC
Confidence            69999999999999882          399999999999988742      3898766532 235567777888888766


Q ss_pred             CCcceEEEEeeccCCCCceEEEEEEeCCccEEEEE
Q 047157          224 TGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQQFA  258 (788)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~rl~ld~~G~l~~~~  258 (788)
                      ++..+.  ...  ........|++|+.||++++|.
T Consensus        67 ~~~~vW--ss~--t~~~~~~~~~~L~~dGNlvly~   97 (109)
T 3r0e_A           67 DGSTVW--KSG--AQSVKGNYAAVVHPDGRLVVFG   97 (109)
T ss_dssp             TSCEEE--ECC--CCCSSSCCEEEEETTTEEEEEC
T ss_pred             CCCEEE--cCC--CcCCCcCEEEEEcCCCeEEEEe
Confidence            554222  111  1112335689999999999984

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=98.37  E-value=1.3e-06  Score=87.90  Aligned_cols=74  Identities=27%  Similarity=0.345  Sum_probs=54.7

Q ss_pred             CcEEEEecCCceEEEeCCCcEEEEeccc---ccccccCCCCcEEEEecCCceeecccCCCCCcccCCccccCCCeEEeec
Q 047157           88 GSKITLTNDGKLLLTYFNGSVQQIYSGA---ASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNS  164 (788)
Q Consensus        88 ~s~l~l~~~G~L~l~~~~~~~~~~~s~~---~~~a~LldsGNlVl~~~~~~~lWqSFD~PtDtllpg~~l~~g~~l~s~~  164 (788)
                      ..+|.+..+|||+|.+. ++++|..++.   ...+.|.++|||||+|.++.++|+|+++.                    
T Consensus        27 ~f~l~f~~~gnl~ly~~-~~~vW~an~~~~~~~~l~l~~dGnLvl~d~~~~~vW~s~~~~--------------------   85 (236)
T 1dlp_A           27 SFRFTMQSDCNLVLFDS-DVRVWASNTAGATGCRAVLQSDGLLVILTAQNTIRWSSGTKG--------------------   85 (236)
T ss_dssp             TEEEEECTTSCEEEEES-SSEEECCCCCSCSCCBCCBCSSSCBCCBCTTTCCSCCCCCCC--------------------
T ss_pred             CEEEEECCCCcEEEEEC-CEEEEECCCCCCCCeEEEEcCCCcEEEEcCCCcEEEeCCccc--------------------
Confidence            34677777899998875 5555544442   34788999999999999999999998641                    


Q ss_pred             CCCCCCCCCceEEeeccCCcceee
Q 047157          165 RGTADYSTGNYTLEMQADGNLVLS  188 (788)
Q Consensus       165 ~~~~dps~G~~~~~~~~~g~~~~~  188 (788)
                            ++|.|.+.|+.+|+++++
T Consensus        86 ------~~~~~~~~l~d~Gnlvl~  103 (236)
T 1dlp_A           86 ------SIGNYVLVLQPDRTVTIY  103 (236)
T ss_dssp             ------CSSCCEEEECSSSCEEEE
T ss_pred             ------cCCcEEEEEeCCCCEEEe
Confidence                  135677788888887664

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=98.22  E-value=4.5e-06  Score=72.16  Aligned_cols=73  Identities=27%  Similarity=0.497  Sum_probs=55.2

Q ss_pred             cEEEEecCCceEEEeCCCcEEEEeccc-----ccccccCCCCcEEEEecCCceeecccCCCCCcccCCccccCCCeEEee
Q 047157           89 SKITLTNDGKLLLTYFNGSVQQIYSGA-----ASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSN  163 (788)
Q Consensus        89 s~l~l~~~G~L~l~~~~~~~~~~~s~~-----~~~a~LldsGNlVl~~~~~~~lWqSFD~PtDtllpg~~l~~g~~l~s~  163 (788)
                      -+|.+-.||||||.+. +++.|.+++.     ...+.|.++|||||.|.++.++|+|-.                     
T Consensus        21 y~l~~q~DgNLvly~~-~~~vW~ant~~~~~~~~~L~l~~dGnLvL~d~~~~~vWss~t---------------------   78 (105)
T 4h3o_A           21 YHFIMQDDCNLVLYDH-STSTWASNTEIGGKSGCSAVLQSDGNFVVYDSSGRSLWASHS---------------------   78 (105)
T ss_dssp             EEEEECTTSCEEEEET-TEEEEECCCCCTTCCSCEEEECTTSCEEEECTTCCEEEECCC---------------------
T ss_pred             EEEEECCCCeEEEEEC-CEEEEEecCCCCCCccEEEEEeCCccEEEECCCcEEEEEecC---------------------
Confidence            4788889999999974 4455544442     245789999999999999999998721                     


Q ss_pred             cCCCCCCCCCceEEeeccCCcceee
Q 047157          164 SRGTADYSTGNYTLEMQADGNLVLS  188 (788)
Q Consensus       164 ~~~~~dps~G~~~~~~~~~g~~~~~  188 (788)
                           ....|.+.+.|+.+|++.++
T Consensus        79 -----~~~~~~~~l~L~ddGNlVly   98 (105)
T 4h3o_A           79 -----TRGSGNYILILQDDGNVIIY   98 (105)
T ss_dssp             -----CCCSSCEEEEECTTSCEEEE
T ss_pred             -----CCCCCCEEEEEeCCCeEEEE
Confidence                 01246788999999998764

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.10  E-value=9e-06  Score=83.67  Aligned_cols=134  Identities=19%  Similarity=0.179  Sum_probs=95.3

Q ss_pred             ccccccc-eEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC-ccccceEeeEEecCCeEEEEEecCCCCC
Q 047157          496 VGTGSSG-KVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDKRLLVYELMPNGT  573 (788)
Q Consensus       496 lg~G~~g-~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lV~e~~~~gs  573 (788)
                      +..|..+ .||+....  ..+..+.+|.-...   ....+.+|...|+.+. +--+.++++++.+.+..++|||++++.+
T Consensus        32 ~~~G~S~~~v~rl~~~--~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~  106 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGK--PNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT  106 (272)
T ss_dssp             EECSSSSCEEEEEECC--TTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred             ccCCCcCCeEEEEEec--CCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence            4445444 68876543  45557888876543   3456778888887773 4447889999999999999999999988


Q ss_pred             HhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcc---------------------------------------------
Q 047157          574 LSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC---------------------------------------------  608 (788)
Q Consensus       574 L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---------------------------------------------  608 (788)
                      +.+.....     ......+..++++.|..||...                                             
T Consensus       107 ~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (272)
T 4gkh_A          107 AFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK  181 (272)
T ss_dssp             HHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred             ccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence            87765321     1223456677777777777521                                             


Q ss_pred             ----------CCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          609 ----------ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       609 ----------~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                                .+.++|+|+.+.||+++     +...+-|+||+.+.
T Consensus       182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~-----~~~~~~viDwe~a~  222 (272)
T 4gkh_A          182 EMHKLLPFSPDSVVTHGDFSLDNLIFD-----EGKLIGCIDVGRVG  222 (272)
T ss_dssp             HHHTTCCCCCCEEEECSCCCTTSEEEE-----TTEEEEECCCTTCE
T ss_pred             HHHhcccccCCcEEEcCCCCCCeEEEE-----CCeEEEEEECcccc
Confidence                      12379999999999998     55667799999875

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.01  E-value=2.4e-05  Score=82.10  Aligned_cols=138  Identities=15%  Similarity=0.163  Sum_probs=94.0

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCcc---ccceEeeEEe-cCCeEEEEEecC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHK---NLVRLLGFCS-EEDKRLLVYELM  569 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hp---niv~~~~~~~-~~~~~~lV~e~~  569 (788)
                      +.++.|....||+.       +..+++|....  ......+.+|.++|+.+.+.   .+.+++.+.. ..+..++|||++
T Consensus        25 ~~l~~G~~n~v~~v-------g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i   95 (306)
T 3tdw_A           25 ESLGEGFRNYAILV-------NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV   95 (306)
T ss_dssp             EEEEECSSEEEEEE-------TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred             eecCCCcceeEEEE-------CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence            45778888899976       23577777532  33456788999999988642   3667777764 455678999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhc------------------------------------------
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE------------------------------------------  607 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~------------------------------------------  607 (788)
                      +|.+|.+...   ..++..+...++.++++.|+.||+.                                          
T Consensus        96 ~G~~l~~~~~---~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l  172 (306)
T 3tdw_A           96 QGQILGEDGM---AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL  172 (306)
T ss_dssp             CSEECHHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred             CCeECchhhh---hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence            9988876321   1234455556666666666666642                                          


Q ss_pred             ---------------cCCceEecCCCCCcEEeccCCCCCCCc-EEEeecCCccc
Q 047157          608 ---------------CETQIIHCDIKPQNVLLDLKTLDTNYM-AKISDFGISKL  645 (788)
Q Consensus       608 ---------------~~~~ivH~dlkp~NIll~~~~~~~~~~-~kL~Dfg~a~~  645 (788)
                                     ..+.++|+|++|.||+++...  .++. +.|+||+.+..
T Consensus       173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~--~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNS--RQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTC--SSCCEEEECCCTTCEE
T ss_pred             HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCC--CCCceEEEEehhhcCC
Confidence                           223579999999999998311  1344 58999998764

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.85  E-value=2e-05  Score=84.60  Aligned_cols=83  Identities=10%  Similarity=0.028  Sum_probs=54.5

Q ss_pred             ccc-cccccceEEEEEEec--cC--cceeeeeeecccch---HHHHHHHHHHHHHhcCCC-c--cccceEeeEEecC---
Q 047157          494 KLV-GTGSSGKVYRGILRL--KD--TQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTH-H--KNLVRLLGFCSEE---  559 (788)
Q Consensus       494 ~~l-g~G~~g~Vy~~~~~~--~~--~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~-h--pniv~~~~~~~~~---  559 (788)
                      +.| +.|....+|+.....  ++  .+..+++|......   ......+.+|..+++.+. +  ..+.+++.++.+.   
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~  105 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL  105 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence            456 788889999876520  00  14578888765432   001245678888888774 3  3577888887665   


Q ss_pred             CeEEEEEecCCCCCHhH
Q 047157          560 DKRLLVYELMPNGTLSN  576 (788)
Q Consensus       560 ~~~~lV~e~~~~gsL~~  576 (788)
                      ...++|||+++|..+.+
T Consensus       106 g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A          106 GTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             SSCEEEEECCCCBCCCB
T ss_pred             CCceEEEEecCCCChhh
Confidence            35689999999877653

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.56  E-value=0.00013  Score=79.43  Aligned_cols=75  Identities=13%  Similarity=0.097  Sum_probs=47.3

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchH-------HHHHHHHHHHHHhcCCC---ccccceEeeEEecCCeEE
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE-------KTNEEFMTELKIIGRTH---HKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~-------~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~  563 (788)
                      +.||.|..+.||++...  ..+..++||.......       ....++..|.++++.+.   ...+++++.+  +.+..+
T Consensus        36 ~~lg~G~~n~vyrv~~~--~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~  111 (397)
T 2olc_A           36 QEIGDGNLNYVFHIYDQ--EHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV  111 (397)
T ss_dssp             EECCSSSSEEEEEEEC------CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred             EECCCCceEEEEEEEEC--CCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccE
Confidence            57899999999998654  3345788997542211       12235667888887663   2345566654  344568


Q ss_pred             EEEecCCCC
Q 047157          564 LVYELMPNG  572 (788)
Q Consensus       564 lV~e~~~~g  572 (788)
                      +|||++++.
T Consensus       112 lvmE~l~g~  120 (397)
T 2olc_A          112 TVMEDLSHL  120 (397)
T ss_dssp             EEECCCTTS
T ss_pred             EEEEeCCCc
Confidence            999999764

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.38  E-value=0.00094  Score=70.81  Aligned_cols=138  Identities=14%  Similarity=0.153  Sum_probs=76.7

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCc--cccceEee------EEecCCeEEEE
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHH--KNLVRLLG------FCSEEDKRLLV  565 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h--pniv~~~~------~~~~~~~~~lV  565 (788)
                      +.|+.|....||+...   .++ .+++|+.....    ..+..|.++++.|..  -.+++++.      +....+..++|
T Consensus        38 ~~l~gG~~n~~~~v~~---~~~-~~vlk~~~~~~----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l  109 (346)
T 2q83_A           38 DVIQGNQMALVWKVHT---DSG-AVCLKRIHRPE----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVV  109 (346)
T ss_dssp             EECC----CEEEEEEE---TTE-EEEEEEECSCH----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEE
T ss_pred             eeccccccCcEEEEEe---CCC-CEEEEecCCCH----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEE
Confidence            3466677889998865   334 58888886532    223344454444421  12333332      12346678999


Q ss_pred             EecCCCCCHh-----------Hhh---hc--cCC-----------CCCHHHH----------------------------
Q 047157          566 YELMPNGTLS-----------NFL---FH--EGQ-----------RPGWVQR----------------------------  590 (788)
Q Consensus       566 ~e~~~~gsL~-----------~~l---~~--~~~-----------~~~~~~~----------------------------  590 (788)
                      |||++|..+.           ..|   +.  ...           ...|...                            
T Consensus       110 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  189 (346)
T 2q83_A          110 YDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYL  189 (346)
T ss_dssp             EECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred             EEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHH
Confidence            9999986542           111   11  000           0123211                            


Q ss_pred             ---HHHHHHHHHHHHHhhh----------ccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          591 ---VEIALGVARGLLYLHE----------ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       591 ---~~i~~qi~~aL~~LH~----------~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                         ..+..++..++.+|+.          .....++|+|+++.|||++     .+..+.|+||+.+.
T Consensus       190 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~-----~~~~~~lIDfe~a~  251 (346)
T 2q83_A          190 QEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLG-----ENEQIWVIDLDTVS  251 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEEC-----GGGCEEECCCTTCE
T ss_pred             HHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEe-----CCCcEEEEehhhcc
Confidence               0111223446666763          1345899999999999997     55689999999775

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.07  E-value=0.0047  Score=64.47  Aligned_cols=74  Identities=14%  Similarity=0.126  Sum_probs=57.5

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC---ccccceEeeEEecCCeEEEEEecCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH---HKNLVRLLGFCSEEDKRLLVYELMP  570 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~lV~e~~~  570 (788)
                      +.|+.|....+|+...    .+..+++|.....   ....+..|.+.|+.|.   ...+++++.+....+..++|||+++
T Consensus        42 ~~l~gG~~n~~y~v~~----~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~  114 (312)
T 3jr1_A           42 EKLYSGEMNEIWLIND----EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN  114 (312)
T ss_dssp             EEECCSSSSEEEEEES----SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred             EEeCCccceeeeEEEE----CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence            4688999999998753    3447888876543   2456788988888774   3668899999888889999999999


Q ss_pred             CCCH
Q 047157          571 NGTL  574 (788)
Q Consensus       571 ~gsL  574 (788)
                      +..+
T Consensus       115 G~~~  118 (312)
T 3jr1_A          115 KSKN  118 (312)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8764

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.00  E-value=0.0025  Score=69.91  Aligned_cols=79  Identities=10%  Similarity=-0.009  Sum_probs=46.0

Q ss_pred             CCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCC---CCCccCcchhhHH
Q 047157          609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV---PVTTKVDVFSFGV  685 (788)
Q Consensus       609 ~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~s~k~DVwSlGv  685 (788)
                      ...++|+|++|.|||++     .+. ++|+||+.+..-.........-..-...|.+|+.....   .-....++.+...
T Consensus       231 ~~~liHGDl~~~Nil~~-----~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVT-----QDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIE  304 (420)
T ss_dssp             CCEEECSCCSGGGEEEC-----SSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEEe-----CCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHH
Confidence            45899999999999997     443 99999998875322111100000001245666554311   1112345567777


Q ss_pred             HHHHHHhC
Q 047157          686 MLLEIICG  693 (788)
Q Consensus       686 il~elltg  693 (788)
                      .+|+...+
T Consensus       305 ~~~~~y~~  312 (420)
T 2pyw_A          305 QTWNLFNK  312 (420)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            78877654

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.85  E-value=0.0019  Score=66.86  Aligned_cols=74  Identities=19%  Similarity=0.166  Sum_probs=51.6

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC-c--cccceEeeEEecCCeEEEEEecCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-H--KNLVRLLGFCSEEDKRLLVYELMP  570 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-h--pniv~~~~~~~~~~~~~lV~e~~~  570 (788)
                      +.+|.|..+.||+...   .++..+.+|+...........|..|.+.|+.|. .  --+++++++.    ..++|||+++
T Consensus        21 ~~~g~G~~~~vyrv~l---~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~   93 (288)
T 3f7w_A           21 AERGHSHRWHLYRVEL---ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD   93 (288)
T ss_dssp             EEEEEETTEEEEEEEE---TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred             EecCCCCCeEEEEEEE---CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeec
Confidence            5689999999999987   456689999875443333445778888887773 2  2355666542    2378999988


Q ss_pred             CCCH
Q 047157          571 NGTL  574 (788)
Q Consensus       571 ~gsL  574 (788)
                      .+..
T Consensus        94 ~~~~   97 (288)
T 3f7w_A           94 ERPP   97 (288)
T ss_dssp             CCCC
T ss_pred             ccCC
Confidence            7653

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=96.44  E-value=0.019  Score=55.60  Aligned_cols=104  Identities=12%  Similarity=-0.031  Sum_probs=68.2

Q ss_pred             CCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCC
Q 047157          571 NGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ  650 (788)
Q Consensus       571 ~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~  650 (788)
                      .-+|.+.|...+.+++++++|.++.|.+.+|.-+-.+.  .-..+=+.|..|++.     .+|.|.+.+ ..+.      
T Consensus        32 ~vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~-----~dG~V~f~~-~~s~------   97 (229)
T 2yle_A           32 ALSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVW-----RDGAVTLAP-AADD------   97 (229)
T ss_dssp             EEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEE-----TTSCEEECC-C---------
T ss_pred             cccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEe-----cCCceeccc-cccc------
Confidence            34899999999999999999999999999987762210  111333456888887     777777654 1110      


Q ss_pred             CcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCC
Q 047157          651 TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRH  696 (788)
Q Consensus       651 ~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p  696 (788)
                             .....+.|||... ...+.+.=|||||++||.-+--..|
T Consensus        98 -------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~  135 (229)
T 2yle_A           98 -------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK  135 (229)
T ss_dssp             ----------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             -------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence                   1123577888763 3456788999999999999865443

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=96.41  E-value=0.0058  Score=65.63  Aligned_cols=146  Identities=16%  Similarity=0.140  Sum_probs=80.3

Q ss_pred             ccccccccceEEEEEEec-----cCcceeeeeeecccchHHHHHHHHHHHHHhcCCC-ccccceEeeEEecCCeEEEEEe
Q 047157          494 KLVGTGSSGKVYRGILRL-----KDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~-----~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      +.|..|-...+|+.....     ...+..+.+|+.... ......+.+|.++++.+. +.-..++++++.++    +|||
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~g----~v~e  130 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPEG----RLEQ  130 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETTE----EEEE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCCc----cEEE
Confidence            456667788889876531     112357888876332 223445668988888774 33346777776542    9999


Q ss_pred             cCCCCCHhHh--------------h---hcc----CCCCC--HHHHHHHHHHHHH-------------------HHHHhh
Q 047157          568 LMPNGTLSNF--------------L---FHE----GQRPG--WVQRVEIALGVAR-------------------GLLYLH  605 (788)
Q Consensus       568 ~~~~gsL~~~--------------l---~~~----~~~~~--~~~~~~i~~qi~~-------------------aL~~LH  605 (788)
                      |++|.+|..-              |   +..    ++...  +.++.++..++..                   .+..|.
T Consensus       131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~  210 (379)
T 3feg_A          131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR  210 (379)
T ss_dssp             CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred             EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence            9987655311              1   111    11222  3444444443321                   123332


Q ss_pred             hc-----cCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          606 EE-----CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       606 ~~-----~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      +.     ....++|+|+.+.||+++.+. .....+.|+||..+..
T Consensus       211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~-~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          211 KLLESTPSPVVFCHNDIQEGNILLLSEP-ENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHTSCCCEEEECSCCCGGGEEEESCC----CCEEECCCTTCEE
T ss_pred             HHHhhcCCCcEEEcCCCCCCeEEEcCCC-CccCcEEEEecccCCc
Confidence            21     234789999999999998321 0136899999998763

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=96.41  E-value=0.0046  Score=67.84  Aligned_cols=75  Identities=16%  Similarity=0.173  Sum_probs=47.8

Q ss_pred             ccccccccceEEEEEEecc-----CcceeeeeeecccchHHHHHHHHHHHHHhcCCCccc-cceEeeEEecCCeEEEEEe
Q 047157          494 KLVGTGSSGKVYRGILRLK-----DTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKN-LVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~-----~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpn-iv~~~~~~~~~~~~~lV~e  567 (788)
                      +.|+.|....+|+......     ..+..+++|+....  .....+..|..+++.+...+ .+++++.+.+    .+|+|
T Consensus        79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e  152 (429)
T 1nw1_A           79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  152 (429)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence            4677788899999876421     12357888887431  11134557888888775333 3677776543    28999


Q ss_pred             cCCCCCH
Q 047157          568 LMPNGTL  574 (788)
Q Consensus       568 ~~~~gsL  574 (788)
                      |++|.+|
T Consensus       153 ~l~G~~l  159 (429)
T 1nw1_A          153 YIPSRPL  159 (429)
T ss_dssp             CCCEEEC
T ss_pred             EeCCccc
Confidence            9986443

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=96.23  E-value=0.0067  Score=63.61  Aligned_cols=140  Identities=14%  Similarity=0.153  Sum_probs=74.7

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccc--cceEeeE------EecCCeEEEE
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKN--LVRLLGF------CSEEDKRLLV  565 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpn--iv~~~~~------~~~~~~~~lV  565 (788)
                      +.|+.|....+|+....   ++ .+++|......  ..+.+..|+.++..+....  +++++..      ....+..+++
T Consensus        28 ~~i~~G~~n~~~~v~~~---~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l  101 (322)
T 2ppq_A           28 KGIAEGVENSNFLLHTT---KD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAAL  101 (322)
T ss_dssp             EEECC---EEEEEEEES---SC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEE
T ss_pred             eccCCCcccceEEEEeC---Cc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEE
Confidence            45677888899988653   33 67788776521  1234456666666553211  3333321      1234567899


Q ss_pred             EecCCCCCHhH-----------h---hhcc----CCC----C---CHHHHHH------------HHHHHHHHHHHhhhc-
Q 047157          566 YELMPNGTLSN-----------F---LFHE----GQR----P---GWVQRVE------------IALGVARGLLYLHEE-  607 (788)
Q Consensus       566 ~e~~~~gsL~~-----------~---l~~~----~~~----~---~~~~~~~------------i~~qi~~aL~~LH~~-  607 (788)
                      +++++|..+..           .   ++..    ...    .   .|...+.            +...+.+.+..++.. 
T Consensus       102 ~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~  181 (322)
T 2ppq_A          102 ISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHW  181 (322)
T ss_dssp             EECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHC
T ss_pred             EEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhC
Confidence            99998865421           0   1110    000    1   1222110            001134445555432 


Q ss_pred             ---cCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          608 ---CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       608 ---~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                         ....++|+|+++.|||++     ++..+.|+||+.+.
T Consensus       182 ~~~~~~~liHgDl~~~Nil~~-----~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          182 PKDLPAGVIHADLFQDNVFFL-----GDELSGLIDFYFAC  216 (322)
T ss_dssp             CCSSCEEEECSCCCGGGEEEE-----TTEEEEECCCTTCE
T ss_pred             cccCCcccCCCCCCccCEEEe-----CCceEEEecchhcc
Confidence               234799999999999997     55455799998775

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=96.13  E-value=0.0077  Score=62.55  Aligned_cols=70  Identities=13%  Similarity=0.086  Sum_probs=41.2

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCcccc-ceEeeEEecCCeEEEEEecC-CC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNL-VRLLGFCSEEDKRLLVYELM-PN  571 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpni-v~~~~~~~~~~~~~lV~e~~-~~  571 (788)
                      +.|+.|....+|+.        ..+++|........ .....+|..+++.+....+ .+++++.  .+.-++|+||+ ++
T Consensus        24 ~~l~gG~tN~~~~~--------~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g   92 (301)
T 3dxq_A           24 LERLGGLTNLVFRA--------GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGA   92 (301)
T ss_dssp             EEEESCSSEEEEEE--------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTC
T ss_pred             eEcCCcccccccee--------eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCC
Confidence            56788888999987        25777776543211 1122457777766642222 5666543  33457899999 66


Q ss_pred             CCH
Q 047157          572 GTL  574 (788)
Q Consensus       572 gsL  574 (788)
                      .+|
T Consensus        93 ~~l   95 (301)
T 3dxq_A           93 QTM   95 (301)
T ss_dssp             EEC
T ss_pred             ccC
Confidence            554

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=95.74  E-value=0.019  Score=61.54  Aligned_cols=76  Identities=12%  Similarity=0.166  Sum_probs=42.4

Q ss_pred             ccccccccceEEEEEEeccC------cceeeeeeecccchHHHHHHHHHHHHHhcCCCccc-cceEeeEEecCCeEEEEE
Q 047157          494 KLVGTGSSGKVYRGILRLKD------TQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKN-LVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~------~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpn-iv~~~~~~~~~~~~~lV~  566 (788)
                      +.|+.|....+|+.......      .+..+++|+........ .....|.++++.+...+ .+++++..  .  -++||
T Consensus        39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~-~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~  113 (369)
T 3c5i_A           39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDEL-YNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE  113 (369)
T ss_dssp             EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGT-SCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred             EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccce-ecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence            45677888899988764100      12477888765432211 12356777777764333 45676554  2  26899


Q ss_pred             ecCCCCCH
Q 047157          567 ELMPNGTL  574 (788)
Q Consensus       567 e~~~~gsL  574 (788)
                      ||++|..+
T Consensus       114 e~i~G~~l  121 (369)
T 3c5i_A          114 EWLYGDPL  121 (369)
T ss_dssp             ECCCSEEC
T ss_pred             EEecCCcC
Confidence            99987544

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=95.70  E-value=0.03  Score=58.98  Aligned_cols=36  Identities=25%  Similarity=0.243  Sum_probs=27.3

Q ss_pred             CCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       609 ~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ...++|+|+.+.||+++.+.. ....+.|+||+.+..
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~-~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPERE-GLARVGVIDFQDAKL  217 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSC-GGGGEEECCCTTCEE
T ss_pred             CCeeEeCCcCcccEEeccCcC-CCCCeEEEeCCCcCc
Confidence            358999999999999973110 025789999998875

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=95.66  E-value=0.021  Score=62.99  Aligned_cols=74  Identities=15%  Similarity=0.130  Sum_probs=44.7

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCcccc-ceEeeEEecCCeEEEEEecCCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNL-VRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpni-v~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      +.|+.|-...+|+....  +.+..+++|+........ -....|..++..|...++ +++++.+.  +  .+|+||++|.
T Consensus       114 ~~lsgG~tN~~y~v~~~--~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~  186 (458)
T 2qg7_A          114 QIINGGITNILIKVKDM--SKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGY  186 (458)
T ss_dssp             EEECC--CEEEEEEEET--TTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSE
T ss_pred             EEcCCCeEeEEEEEEEC--CCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCc
Confidence            56778888999998763  223578888764322111 112478888887754444 67777763  2  2599999875


Q ss_pred             CH
Q 047157          573 TL  574 (788)
Q Consensus       573 sL  574 (788)
                      +|
T Consensus       187 ~l  188 (458)
T 2qg7_A          187 AL  188 (458)
T ss_dssp             EC
T ss_pred             cC
Confidence            44

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=95.62  E-value=0.024  Score=59.48  Aligned_cols=75  Identities=11%  Similarity=0.125  Sum_probs=43.9

Q ss_pred             cccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCcc--ccceEeeE-----EecCCeEEEEEe
Q 047157          495 LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHK--NLVRLLGF-----CSEEDKRLLVYE  567 (788)
Q Consensus       495 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hp--niv~~~~~-----~~~~~~~~lV~e  567 (788)
                      .++ |....||+...   .++..+++|...... .....+..|..++..+...  .+++++..     ....+..++|+|
T Consensus        33 ~l~-g~~n~~y~v~~---~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~  107 (328)
T 1zyl_A           33 PLN-SYENRVYQFQD---EDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP  107 (328)
T ss_dssp             EEC-CSSSEEEEECC---TTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred             eec-CcccceEEEEc---CCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence            455 77788997643   234478889875321 1234555677776665321  23444432     223456688999


Q ss_pred             cCCCCCH
Q 047157          568 LMPNGTL  574 (788)
Q Consensus       568 ~~~~gsL  574 (788)
                      +++|..+
T Consensus       108 ~i~G~~~  114 (328)
T 1zyl_A          108 SVGGRQF  114 (328)
T ss_dssp             CCCCEEC
T ss_pred             ecCCCCC
Confidence            9987543

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=94.26  E-value=0.18  Score=53.17  Aligned_cols=32  Identities=28%  Similarity=0.341  Sum_probs=27.0

Q ss_pred             CCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       609 ~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ...++|+|+.+.||+++     +++.+.|+||+.+..
T Consensus       205 ~~~~~HgD~~~~N~l~~-----~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVG-----NEESIYIIDWDEPML  236 (339)
T ss_dssp             GCEEECSCCCGGGEEEC-----GGGCEEECCCSSCEE
T ss_pred             CceeEeCCCCcCCEEEe-----CCCeEEEEECCCCee
Confidence            35799999999999997     556799999987764

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=92.51  E-value=0.16  Score=55.20  Aligned_cols=76  Identities=12%  Similarity=0.084  Sum_probs=45.1

Q ss_pred             ccccccccceEEEEEEeccCc-----ceeeeeeecccchHHHHHHHHHHHHHhcCCC-ccccceEeeEEecCCeEEEEEe
Q 047157          494 KLVGTGSSGKVYRGILRLKDT-----QIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~-----~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      +.|..|-...+|+........     +..+++|+....... .-...+|.++++.+. +.-..++++.+.    -++|+|
T Consensus        76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e  150 (424)
T 3mes_A           76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE  150 (424)
T ss_dssp             EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred             EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence            456677788899887642111     357888876443211 112346777777764 333456665442    278999


Q ss_pred             cCCCCCH
Q 047157          568 LMPNGTL  574 (788)
Q Consensus       568 ~~~~gsL  574 (788)
                      |++|..|
T Consensus       151 fI~G~~l  157 (424)
T 3mes_A          151 FIDGEPL  157 (424)
T ss_dssp             CCCSEEC
T ss_pred             EeCCccC
Confidence            9998654

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=83.92  E-value=1.8  Score=41.68  Aligned_cols=115  Identities=9%  Similarity=0.150  Sum_probs=79.6

Q ss_pred             CccccceEeeEEecCCeEEEEEecCCCC-CHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEE
Q 047157          545 HHKNLVRLLGFCSEEDKRLLVYELMPNG-TLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVL  623 (788)
Q Consensus       545 ~hpniv~~~~~~~~~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIl  623 (788)
                      .||+++.. .+-.+++...+.|+.-+.+ ++.. +    +..+...+++++.+|+....+++.+     +|--|+|+||+
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i----k~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~  111 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I----KSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELF  111 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G----GGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEE
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H----HhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEE
Confidence            68888876 5666777777777765422 3332 3    4567889999999999988777654     78899999999


Q ss_pred             eccCCCCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCC
Q 047157          624 LDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIE  698 (788)
Q Consensus       624 l~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~  698 (788)
                      ++     .++.+++.--|+-..+                  +|.-     .+...=.-.+=+++..++.++..|+
T Consensus       112 f~-----~~~~p~i~~RGik~~l------------------~P~~-----~~ee~fL~qyKAliiall~~K~~Fe  158 (215)
T 4ann_A          112 FT-----RDGLPIAKTRGLQNVV------------------DPLP-----VSEAEFLTRYKALVICAFNEKQSFD  158 (215)
T ss_dssp             EC-----TTSCEEESCCEETTTB------------------SCCC-----CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred             Ec-----CCCCEEEEEccCccCC------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence            99     8889999876654332                  2221     1111112245678888999988875

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=83.62  E-value=3  Score=40.26  Aligned_cols=115  Identities=10%  Similarity=0.123  Sum_probs=77.6

Q ss_pred             CccccceEeeEEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHH-HhhhccCCceEecCCCCCcEE
Q 047157          545 HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLL-YLHEECETQIIHCDIKPQNVL  623 (788)
Q Consensus       545 ~hpniv~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~-~LH~~~~~~ivH~dlkp~NIl  623 (788)
                      .||++  -..+-.+++...+.++.-+++.=...+    +..+...+++++.+|+.... +++.+     +|--|+|+||+
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i----~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL~  116 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI----RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENLM  116 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH----HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGEE
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH----HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceEE
Confidence            57887  344457778888888876443322233    45788899999999998888 77654     78899999999


Q ss_pred             eccCCCCCCCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCC
Q 047157          624 LDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIE  698 (788)
Q Consensus       624 l~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~  698 (788)
                      ++     .++.+++.-.|+-..                  ++|.-+..     .-=.-++=+++..++.++..|+
T Consensus       117 f~-----~~~~p~i~hRGi~~~------------------lpP~e~~e-----e~fl~qyKali~all~~K~~Fe  163 (219)
T 4ano_A          117 FN-----RALEPFFLHVGVKES------------------LPPDEWDD-----ERLLREVKATVLALTEGEYRFD  163 (219)
T ss_dssp             EC-----TTCCEEESCCEETTT------------------BSSCSCCH-----HHHHHHHHHHHHHHTTCSSCHH
T ss_pred             Ee-----CCCcEEEEEcCCccc------------------CCCCCCCH-----HHHHHHHHHHHHHHHcCCCCHH
Confidence            98     888999987665433                  33332111     1112245567778888877764

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=81.76  E-value=0.55  Score=50.61  Aligned_cols=35  Identities=23%  Similarity=0.185  Sum_probs=26.4

Q ss_pred             ceEecCCCCCcEEeccCCC-CCCCcEEEeecCCccc
Q 047157          611 QIIHCDIKPQNVLLDLKTL-DTNYMAKISDFGISKL  645 (788)
Q Consensus       611 ~ivH~dlkp~NIll~~~~~-~~~~~~kL~Dfg~a~~  645 (788)
                      .++|+|+.+.|||+..... .+...++++||..|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            4679999999999953211 1456799999998864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	788
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-64
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-62
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-62
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	5e-61
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	7e-61
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	5e-58
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	9e-58
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-57
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-57
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-57
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-56
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-56
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-56
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-55
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-55
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	6e-55
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-54
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	5e-54
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-54
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-53
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-53
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	7e-53
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-52
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-52
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-52
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-50
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-50
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-50
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-50
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-49
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-48
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-47
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-47
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-46
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-46
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-44
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-42
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-42
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-42
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-42
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-41
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-41
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-41
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-41
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-41
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	6e-41
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-40
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	9e-39
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-38
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	6e-38
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-37
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-37
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-35
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	3e-35
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-33
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	8e-33
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-32
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-31
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-30
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-29
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-28
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-28
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	8e-17
d1dlpa2	120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	2e-16
d1dlpa2	120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	2e-10
d1dlpa1	115	b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p	5e-16
d1kj1a_	109	b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium	3e-11
d1kj1a_	109	b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium	1e-05
d1b2pa_	119	b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill	5e-11
d1b2pa_	119	b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill	6e-10
d1xd5a_	112	b.78.1.1 (A:) Gastrodianin (antifungal protein) {G	2e-09
d1xd5a_	112	b.78.1.1 (A:) Gastrodianin (antifungal protein) {G	2e-07
d1jpca_	108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	2e-08
d1jpca_	108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	6e-08
d1jpca_	108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	0.002

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  214 bits (546), Expect = 2e-64
 Identities = 62/303 (20%), Positives = 131/303 (43%), Gaps = 42/303 (13%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE 533
           EI   + T  +           +G+GS G VY+G        + + +  +     +  + 
Sbjct: 4   EIPDGQITVGQR----------IGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQA 50

Query: 534 FMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEI 593
           F  E+ ++ +T H N++  +G+     +  +V +     +L + L     +   ++ ++I
Sbjct: 51  FKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 109

Query: 594 ALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ-TR 652
           A   A+G+ YLH +    IIH D+K  N+      L  +   KI DFG++ + ++   + 
Sbjct: 110 ARQTAQGMDYLHAKS---IIHRDLKSNNIF-----LHEDLTVKIGDFGLATVKSRWSGSH 161

Query: 653 TDTNMRGTMGYVAPEWLR---NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEV 709
               + G++ ++APE +R     P + + DV++FG++L E++ G+         ++    
Sbjct: 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ---- 217

Query: 710 DIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH 769
              +   V    LS +L  + S+ P+ +  L            C     + RP   +++ 
Sbjct: 218 ---IIFMVGRGYLSPDLSKVRSNCPKAMKRL---------MAECLKKKRDERPLFPQILA 265

Query: 770 MLE 772
            +E
Sbjct: 266 SIE 268

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  210 bits (535), Expect = 1e-62
 Identities = 73/329 (22%), Positives = 149/329 (45%), Gaps = 54/329 (16%)

Query: 465 RNYFDPNSMEINFREFTFQELQEATKGFS-----------KLVGTGSSGKVYRGILRL-K 512
           + + DP         FTF++  EA + F+           +++G G  G+V  G L+L  
Sbjct: 1   KIFIDP---------FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPG 51

Query: 513 DTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPN 571
             +I +A+K L+    EK   +F++E  I+G+  H N++ L G  ++    +++ E M N
Sbjct: 52  KREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMEN 111

Query: 572 GTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDT 631
           G+L +FL     +   +Q V +  G+A G+ YL +      +H D+  +N+L     +++
Sbjct: 112 GSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNIL-----VNS 163

Query: 632 NYMAKISDFGISKLLNKDQT----RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVML 687
           N + K+SDFG+S+ L  D +     +    +  + + APE ++    T+  DV+S+G+++
Sbjct: 164 NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVM 223

Query: 688 LEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMA 747
            E++            ++                    +   +  D  +   ++    + 
Sbjct: 224 WEVMSYGERPYWDMTNQD--------------------VINAIEQDYRLPPPMDCPSALH 263

Query: 748 MVGLWCNHPDPNLRPSMKKVIHMLEGTLE 776
            + L C   D N RP   ++++ L+  + 
Sbjct: 264 QLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  207 bits (527), Expect = 5e-62
 Identities = 68/287 (23%), Positives = 128/287 (44%), Gaps = 32/287 (11%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           F + +G+G  G V+ G       + ++A+K + +    + E+F+ E +++ +  H  LV+
Sbjct: 9   FVQEIGSGQFGLVHLGYWL---NKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQ 64

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L G C E+    LV+E M +G LS++L  +         + + L V  G+ YL E C   
Sbjct: 65  LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 121

Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           +IH D+  +N L     +  N + K+SDFG+++ +  DQ  + T  +  + + +PE    
Sbjct: 122 VIHRDLAARNCL-----VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSF 176

Query: 672 VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVS 731
              ++K DV+SFGV++ E+    +    +R   E               ++         
Sbjct: 177 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------------VVEDISTGFRL 221

Query: 732 HDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVG 778
           + P + S       +  +   C    P  RP+  +++  L    E G
Sbjct: 222 YKPRLAS-----THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESG 263

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  205 bits (522), Expect = 5e-61
 Identities = 64/300 (21%), Positives = 122/300 (40%), Gaps = 44/300 (14%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE 533
           E+        E           +G G  G+V+ G         ++AVK L++    + + 
Sbjct: 9   EVPRETLKLVER----------LGAGQFGEVWMGYYN---GHTKVAVKSLKQG-SMSPDA 54

Query: 534 FMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF-HEGQRPGWVQRVE 592
           F+ E  ++ +  H+ LVRL      ++   ++ E M NG+L +FL    G +    + ++
Sbjct: 55  FLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113

Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           +A  +A G+ ++ E      IH D++  N+L+           KI+DFG+++L+  ++  
Sbjct: 114 MAAQIAEGMAFIEERN---YIHRDLRAANILVS-----DTLSCKIADFGLARLIEDNEYT 165

Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV 712
                +  + + APE +     T K DV+SFG++L EI+   R         E       
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE------- 218

Query: 713 LSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
                   ++    +      P+        E +  +   C    P  RP+   +  +LE
Sbjct: 219 --------VIQNLERGYRMVRPDNCP-----EELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  204 bits (519), Expect = 7e-61
 Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 42/298 (14%)

Query: 475 INFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEF 534
           I+ ++ TF           K +GTG  G V  G  R    Q ++A+K +++    + +EF
Sbjct: 1   IDPKDLTFL----------KELGTGQFGVVKYGKWR---GQYDVAIKMIKEG-SMSEDEF 46

Query: 535 MTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIA 594
           + E K++    H+ LV+L G C+++    ++ E M NG L N+L     R    Q +E+ 
Sbjct: 47  IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 106

Query: 595 LGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD 654
             V   + YL  +     +H D+  +N L     ++   + K+SDFG+S+ +  D+  + 
Sbjct: 107 KDVCEAMEYLESKQ---FLHRDLAARNCL-----VNDQGVVKVSDFGLSRYVLDDEYTSS 158

Query: 655 TNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS 714
              +  + +  PE L     ++K D+++FGV++ EI    +         E         
Sbjct: 159 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--------- 209

Query: 715 DWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
                       Q L  + P + S     E++  +   C H   + RP+ K ++  + 
Sbjct: 210 ------TAEHIAQGLRLYRPHLAS-----EKVYTIMYSCWHEKADERPTFKILLSNIL 256

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  197 bits (501), Expect = 5e-58
 Identities = 73/304 (24%), Positives = 132/304 (43%), Gaps = 42/304 (13%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE 533
           E+   + T +            +G G  G+VY G    K   + +AVK L++D     EE
Sbjct: 13  EMERTDITMKHK----------LGGGQYGEVYEG--VWKKYSLTVAVKTLKED-TMEVEE 59

Query: 534 FMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRP-GWVQRVE 592
           F+ E  ++    H NLV+LLG C+ E    ++ E M  G L ++L    ++    V  + 
Sbjct: 60  FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 119

Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           +A  ++  + YL ++     IH D+  +N L+       N++ K++DFG+S+L+  D   
Sbjct: 120 MATQISSAMEYLEKKN---FIHRDLAARNCLVG-----ENHLVKVADFGLSRLMTGDTYT 171

Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV 712
                +  + + APE L     + K DV++FGV+L EI             + S+  +++
Sbjct: 172 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS--PYPGIDLSQVYELL 229

Query: 713 LSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
             D+ +               PE        E++  +   C   +P+ RPS  ++    E
Sbjct: 230 EKDYRMER-------------PEGCP-----EKVYELMRACWQWNPSDRPSFAEIHQAFE 271

Query: 773 GTLE 776
              +
Sbjct: 272 TMFQ 275

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  195 bits (497), Expect = 9e-58
 Identities = 78/301 (25%), Positives = 126/301 (41%), Gaps = 50/301 (16%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE 533
            +N +E    +           +G G  G V  G  R      ++AVK ++ D   T + 
Sbjct: 3   ALNMKELKLLQT----------IGKGEFGDVMLGDYR----GNKVAVKCIKND--ATAQA 46

Query: 534 FMTELKIIGRTHHKNLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHEGQRP-GWVQRV 591
           F+ E  ++ +  H NLV+LLG   EE   L +V E M  G+L ++L   G+   G    +
Sbjct: 47  FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 106

Query: 592 EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT 651
           + +L V   + YL        +H D+  +NVL+       + +AK+SDFG++K  +  Q 
Sbjct: 107 KFSLDVCEAMEYLEGNN---FVHRDLAARNVLVS-----EDNVAKVSDFGLTKEASSTQD 158

Query: 652 RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI 711
                 +  + + APE LR    +TK DV+SFG++L EI    R              D+
Sbjct: 159 ----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP-----YPRIPLKDV 209

Query: 712 VLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML 771
           V              +V   +  +          +  V   C H D  +RPS  ++   L
Sbjct: 210 V-------------PRVEKGYKMDAPDGCP--PAVYEVMKNCWHLDAAMRPSFLQLREQL 254

Query: 772 E 772
           E
Sbjct: 255 E 255

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  197 bits (501), Expect = 1e-57
 Identities = 75/291 (25%), Positives = 125/291 (42%), Gaps = 34/291 (11%)

Query: 492 FSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNL 549
           F++++G G  G VY G L   D  +I  AVK L +  +     +F+TE  I+    H N+
Sbjct: 31  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90

Query: 550 VRLLGFCSE-EDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           + LLG C   E   L+V   M +G L NF+ +E   P     +   L VA+G+       
Sbjct: 91  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM---KFLA 147

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNM---RGTMGYVA 665
             + +H D+  +N +LD       +  K++DFG+++ +   +  +  N    +  + ++A
Sbjct: 148 SKKFVHRDLAARNCMLD-----EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 202

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN 725
            E L+    TTK DV+SFGV+L E++             +               +    
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---------------ITVYL 247

Query: 726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE 776
           LQ      PE   D      +  V L C HP   +RPS  +++  +     
Sbjct: 248 LQGRRLLQPEYCPD-----PLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 293

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  196 bits (500), Expect = 2e-57
 Identities = 62/297 (20%), Positives = 118/297 (39%), Gaps = 36/297 (12%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRL 552
             +G G+ G V++     K + + +A K +  +I      + + EL+++   +   +V  
Sbjct: 12  SELGAGNGGVVFKV--SHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGF 69

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQI 612
            G    + +  +  E M  G+L   L   G+ P      ++++ V +GL YL E+   +I
Sbjct: 70  YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP-EQILGKVSIAVIKGLTYLREKH--KI 126

Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV 672
           +H D+KP N+L     +++    K+ DFG+S  L      +     GT  Y++PE L+  
Sbjct: 127 MHRDVKPSNIL-----VNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERLQGT 178

Query: 673 PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL------------------- 713
             + + D++S G+ L+E+  GR  I     +E        +                   
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS 238

Query: 714 ---SDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKV 767
               D      +   L  +V+  P  L               C   +P  R  +K++
Sbjct: 239 SYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  194 bits (494), Expect = 5e-57
 Identities = 69/309 (22%), Positives = 124/309 (40%), Gaps = 44/309 (14%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE 533
           EI       +            +G G  G+V+ G      T   +A+K L+     + E 
Sbjct: 13  EIPRESLRLE----------VKLGQGCFGEVWMG--TWNGTT-RVAIKTLKPG-TMSPEA 58

Query: 534 FMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPG-WVQRVE 592
           F+ E +++ +  H+ LV+L    SE +   +V E M  G+L +FL  E  +     Q V+
Sbjct: 59  FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 117

Query: 593 IALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR 652
           +A  +A G+ Y+        +H D++  N+L+       N + K++DFG+++L+  ++  
Sbjct: 118 MAAQIASGMAYVERMN---YVHRDLRAANILVG-----ENLVCKVADFGLARLIEDNEYT 169

Query: 653 TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV 712
                +  + + APE       T K DV+SFG++L E+    R      V  E       
Sbjct: 170 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------- 222

Query: 713 LSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
                   +L +  +      P         E +  +   C   +P  RP+ + +   LE
Sbjct: 223 --------VLDQVERGYRMPCPPECP-----ESLHDLMCQCWRKEPEERPTFEYLQAFLE 269

Query: 773 GTLEVGMPP 781
                  P 
Sbjct: 270 DYFTSTEPQ 278

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  193 bits (490), Expect = 2e-56
 Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 32/279 (11%)

Query: 497 GTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRLLGF 555
           G G+ G V +G+ R++  QI++A+K L++  EK + EE M E +I+ +  +  +VRL+G 
Sbjct: 18  GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV 77

Query: 556 CSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHC 615
           C + +  +LV E+   G L  FL  + +        E+   V+ G+ YL E+     +H 
Sbjct: 78  C-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHR 133

Query: 616 DIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT--RTDTNMRGTMGYVAPEWLRNVP 673
           D+  +NVL     L   + AKISDFG+SK L  D +     +  +  + + APE +    
Sbjct: 134 DLAARNVL-----LVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 188

Query: 674 VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHD 733
            +++ DV+S+GV + E +   +         E               +++   Q      
Sbjct: 189 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---------------VMAFIEQGKRMEC 233

Query: 734 PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
           P           +  +   C       RP    V   + 
Sbjct: 234 PPECP-----PELYALMSDCWIYKWEDRPDFLTVEQRMR 267

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  193 bits (490), Expect = 3e-56
 Identities = 64/298 (21%), Positives = 121/298 (40%), Gaps = 32/298 (10%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           + +G G  G+V+RG    K    E+AVK      E+ +     E+       H+N++  +
Sbjct: 9   ESIGKGRFGEVWRG----KWRGEEVAVKIFSSR-EERSWFREAEIYQTVMLRHENILGFI 63

Query: 554 GFCSEED----KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC- 608
              ++++    +  LV +   +G+L ++L            +++AL  A GL +LH E  
Sbjct: 64  AADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIV 121

Query: 609 ----ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD---TNMRGTM 661
               +  I H D+K +N+L+       N    I+D G++   +      D    +  GT 
Sbjct: 122 GTQGKPAIAHRDLKSKNILVK-----KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 176

Query: 662 GYVAPEWL------RNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSD 715
            Y+APE L      ++     + D+++ G++  EI        +   + +    D+V SD
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE-DYQLPYYDLVPSD 235

Query: 716 WVISCMLSRNL-QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
             +  M      Q L  + P      E    MA +   C + +   R +  ++   L 
Sbjct: 236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  191 bits (487), Expect = 4e-56
 Identities = 72/304 (23%), Positives = 127/304 (41%), Gaps = 43/304 (14%)

Query: 473 MEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN- 531
           + ++ +  T ++         K +G+G+ G V +G  ++K     +AVK L+ +      
Sbjct: 1   VYLDRKLLTLED---------KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 51

Query: 532 -EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR 590
            +E + E  ++ +  +  +VR++G C E +  +LV E+   G L+ +L            
Sbjct: 52  KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVK-DKNI 109

Query: 591 VEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQ 650
           +E+   V+ G+ YL E      +H D+  +NVLL      T + AKISDFG+SK L  D+
Sbjct: 110 IELVHQVSMGMKYLEESN---FVHRDLAARNVLLV-----TQHYAKISDFGLSKALRADE 161

Query: 651 T--RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEE 708
              +  T+ +  + + APE +     ++K DV+SFGV++ E     +         E   
Sbjct: 162 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--- 218

Query: 709 VDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI 768
                   V + +         +  P  + DL            C   D   RP    V 
Sbjct: 219 --------VTAMLEKGERMGCPAGCPREMYDL---------MNLCWTYDVENRPGFAAVE 261

Query: 769 HMLE 772
             L 
Sbjct: 262 LRLR 265

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  191 bits (485), Expect = 2e-55
 Identities = 76/335 (22%), Positives = 128/335 (38%), Gaps = 56/335 (16%)

Query: 466 NYFDPNSMEINFR-EFTFQELQEATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVK 521
            Y DP  +  + + EF    L      F K +G G+ GKV           D  + +AVK
Sbjct: 5   VYIDPTQLPYDHKWEFPRNRLS-----FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVK 59

Query: 522 KLEKD-IEKTNEEFMTELKIIGR-THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLF 579
            L+        E  M+ELK++    +H N+V LLG C+     L++ E    G L NFL 
Sbjct: 60  MLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR 119

Query: 580 HEGQRPG-----------------WVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNV 622
            +                          +  +  VA+G+ +L  +     IH D+  +N+
Sbjct: 120 RKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNI 176

Query: 623 LLDLKTLDTNYMAKISDFGISKLLNKDQTRT-DTNMRGTMGYVAPEWLRNVPVTTKVDVF 681
           L     L    + KI DFG+++ +  D       N R  + ++APE + N   T + DV+
Sbjct: 177 L-----LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVW 231

Query: 682 SFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLE 741
           S+G+ L E+             +                        ++     +LS   
Sbjct: 232 SYGIFLWELFSLGSSPYPGMPVDS-------------------KFYKMIKEGFRMLSPEH 272

Query: 742 RFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE 776
               M  +   C   DP  RP+ K+++ ++E  + 
Sbjct: 273 APAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  190 bits (484), Expect = 4e-55
 Identities = 76/338 (22%), Positives = 139/338 (41%), Gaps = 61/338 (18%)

Query: 467 YFDPNSMEINFR-EFTFQELQEATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKK 522
           Y D    E + + EF  + L+     F K++G+G+ GKV              I++AVK 
Sbjct: 20  YVDFREYEYDLKWEFPRENLE-----FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKM 74

Query: 523 LEKDIEKTN-EEFMTELKIIGR-THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFH 580
           L++  + +  E  M+ELK++ +   H+N+V LLG C+      L++E    G L N+L  
Sbjct: 75  LKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRS 134

Query: 581 EGQRPG----------------------WVQRVEIALGVARGLLYLHEECETQIIHCDIK 618
           + ++                        +   +  A  VA+G+ +L  +     +H D+ 
Sbjct: 135 KREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 191

Query: 619 PQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRT-DTNMRGTMGYVAPEWLRNVPVTTK 677
            +NVL     +    + KI DFG+++ +  D       N R  + ++APE L     T K
Sbjct: 192 ARNVL-----VTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIK 246

Query: 678 VDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVL 737
            DV+S+G++L EI     +     +  ++    ++ + + +               P   
Sbjct: 247 SDVWSYGILLWEIFSLGVNP-YPGIPVDANFYKLIQNGFKMDQ-------------PFYA 292

Query: 738 SDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL 775
           +     E + ++   C   D   RPS   +   L   L
Sbjct: 293 T-----EEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL 325

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (479), Expect = 6e-55
 Identities = 71/311 (22%), Positives = 139/311 (44%), Gaps = 43/311 (13%)

Query: 472 SMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQ--IEIAVKKLEKD-IE 528
           + EI+    T Q          K++G G  G+VY+G+L+    +  + +A+K L+    E
Sbjct: 1   TTEIHPSCVTRQ----------KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE 50

Query: 529 KTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWV 588
           K   +F+ E  I+G+  H N++RL G  S+    +++ E M NG L  FL  +      +
Sbjct: 51  KQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVL 110

Query: 589 QRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK 648
           Q V +  G+A G+ YL        +H D+  +N+L     +++N + K+SDFG+S++L  
Sbjct: 111 QLVGMLRGIAAGMKYLANMN---YVHRDLAARNIL-----VNSNLVCKVSDFGLSRVLED 162

Query: 649 DQ--TRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEES 706
           D   T T +  +  + + APE +     T+  DV+SFG+++ E++             E 
Sbjct: 163 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE- 221

Query: 707 EEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKK 766
                              +   ++    + + ++    +  + + C   +   RP    
Sbjct: 222 -------------------VMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFAD 262

Query: 767 VIHMLEGTLEV 777
           ++ +L+  +  
Sbjct: 263 IVSILDKLIRA 273

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  187 bits (475), Expect = 3e-54
 Identities = 71/313 (22%), Positives = 124/313 (39%), Gaps = 56/313 (17%)

Query: 492 FSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHK 547
           + + +G G+ G+V++         +    +AVK L+++       +F  E  ++    + 
Sbjct: 17  YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 76

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPG--------------------- 586
           N+V+LLG C+      L++E M  G L+ FL                             
Sbjct: 77  NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 136

Query: 587 --WVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK 644
               +++ IA  VA G+ YL E      +H D+  +N L     +  N + KI+DFG+S+
Sbjct: 137 LSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCL-----VGENMVVKIADFGLSR 188

Query: 645 LL-NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVE 703
            + + D  + D N    + ++ PE +     TT+ DV+++GV+L EI             
Sbjct: 189 NIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 248

Query: 704 EESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS 763
           EE           VI  +   N+     + P  L +L            C    P  RPS
Sbjct: 249 EE-----------VIYYVRDGNILACPENCPLELYNL---------MRLCWSKLPADRPS 288

Query: 764 MKKVIHMLEGTLE 776
              +  +L+   E
Sbjct: 289 FCSIHRILQRMCE 301

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  186 bits (473), Expect = 5e-54
 Identities = 62/282 (21%), Positives = 114/282 (40%), Gaps = 37/282 (13%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
             +G G+ GKVY+   + K+T +  A K ++   E+  E++M E+ I+    H N+V+LL
Sbjct: 18  GELGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 75

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
                E+   ++ E    G +   +    +     Q   +       L YLH+    +II
Sbjct: 76  DAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KII 132

Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWL---- 669
           H D+K  N+L        +   K++DFG+S    +   R D+   GT  ++APE +    
Sbjct: 133 HRDLKAGNIL-----FTLDGDIKLADFGVSAKNTRTIQRRDS-FIGTPYWMAPEVVMCET 186

Query: 670 -RNVPVTTKVDVFSFGVMLLEIICGRR-HIELSRVEEESEEVDIVLSDWVISCMLSRNLQ 727
            ++ P   K DV+S G+ L+E+      H EL+ +    +               S N +
Sbjct: 187 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFK 246

Query: 728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH 769
             +                      C   + + R +  +++ 
Sbjct: 247 DFLKK--------------------CLEKNVDARWTTSQLLQ 268

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  185 bits (472), Expect = 5e-54
 Identities = 60/284 (21%), Positives = 107/284 (37%), Gaps = 37/284 (13%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNL 549
           F   +G GS   VY+G     +T +E+A  +L+     +   + F  E +++    H N+
Sbjct: 13  FDIEIGRGSFKTVYKG--LDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI 70

Query: 550 VRLLGFCSEEDKR----LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
           VR         K     +LV ELM +GTL  +L    +             + +GL +LH
Sbjct: 71  VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYL-KRFKVMKIKVLRSWCRQILKGLQFLH 129

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                 IIH D+K  N+ +           KI D G++ L      +    + GT  ++A
Sbjct: 130 TRTP-PIIHRDLKCDNIFIT----GPTGSVKIGDLGLATLKRASFAKA---VIGTPEFMA 181

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN 725
           PE          VDV++FG+ +LE+                         +      ++ 
Sbjct: 182 PEMYEE-KYDESVDVYAFGMCMLEMATSEY-------------------PYSECQNAAQI 221

Query: 726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH 769
            + + S       D      +  +   C   + + R S+K +++
Sbjct: 222 YRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 265

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  184 bits (469), Expect = 4e-53
 Identities = 67/308 (21%), Positives = 117/308 (37%), Gaps = 51/308 (16%)

Query: 469 DPNSMEINFREFTFQELQEATKGFSKL--VGTGSSGKVYRGILRLKDTQIEIAVKKLEKD 526
           DP+  E+ F++       +  K FS L  +G GS G VY    R       +A+KK+   
Sbjct: 1   DPDVAELFFKD-------DPEKLFSDLREIGHGSFGAVYFA--RDVRNSEVVAIKKMSYS 51

Query: 527 IEKTNE---EFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQ 583
            +++NE   + + E++ + +  H N ++  G    E    LV E            H+  
Sbjct: 52  GKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP 111

Query: 584 RPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS 643
               V+   +  G  +GL YLH      +IH D+K  N+L     L    + K+ DFG +
Sbjct: 112 LQ-EVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNIL-----LSEPGLVKLGDFGSA 162

Query: 644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNV---PVTTKVDVFSFGVMLLEIICGRRHIELS 700
            ++    +       GT  ++APE +  +       KVDV+S G+  +E+   +  +   
Sbjct: 163 SIMAPANS-----FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 217

Query: 701 RVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNL 760
                   +    S  + S   S   +  V                      C    P  
Sbjct: 218 NAMSALYHIAQNESPALQSGHWSEYFRNFVD--------------------SCLQKIPQD 257

Query: 761 RPSMKKVI 768
           RP+ + ++
Sbjct: 258 RPTSEVLL 265

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (464), Expect = 5e-53
 Identities = 67/294 (22%), Positives = 123/294 (41%), Gaps = 44/294 (14%)

Query: 478 REFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEF 534
           R++  ++ +       + +G G  G VY    R K ++  +A+K L K          + 
Sbjct: 1   RQWALEDFE-----IGRPLGKGKFGNVYLA--REKQSKFILALKVLFKAQLEKAGVEHQL 53

Query: 535 MTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIA 594
             E++I     H N++RL G+  +  +  L+ E  P GT+   L    +     +     
Sbjct: 54  RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD-EQRTATYI 112

Query: 595 LGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD 654
             +A  L Y H +   ++IH DIKP+N+L     L +    KI+DFG S      +  T 
Sbjct: 113 TELANALSYCHSK---RVIHRDIKPENLL-----LGSAGELKIADFGWSVHAPSSRRTT- 163

Query: 655 TNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS 714
             + GT+ Y+ PE +       KVD++S GV+  E + G+   E +  +E  +   I   
Sbjct: 164 --LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR--ISRV 219

Query: 715 DWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI 768
           ++     ++   + L+S                         +P+ RP +++V+
Sbjct: 220 EFTFPDFVTEGARDLIS--------------------RLLKHNPSQRPMLREVL 253

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (463), Expect = 7e-53
 Identities = 52/284 (18%), Positives = 107/284 (37%), Gaps = 38/284 (13%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVR 551
             +GTGS G+  +   R K     +  K+L+     E   +  ++E+ ++    H N+VR
Sbjct: 10  YTIGTGSYGRCQKI--RRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVR 67

Query: 552 LLGFCSEEDKRL--LVYELMPNGTLSNFLFHEGQRPG---WVQRVEIALGVARGLLYLHE 606
                 +       +V E    G L++ +    +          + +   +   L   H 
Sbjct: 68  YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 127

Query: 607 --ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYV 664
             +    ++H D+KP NV      LD     K+ DFG++++LN D +       GT  Y+
Sbjct: 128 RSDGGHTVLHRDLKPANVF-----LDGKQNVKLGDFGLARILNHDTSFAKA-FVGTPYYM 181

Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR 724
           +PE +  +    K D++S G +L E+            +E            +   +   
Sbjct: 182 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE------------LAGKIREG 229

Query: 725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI 768
             + +     + L+++              +     RPS+++++
Sbjct: 230 KFRRIPYRYSDELNEIIT---------RMLNLKDYHRPSVEEIL 264

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (464), Expect = 2e-52
 Identities = 76/320 (23%), Positives = 133/320 (41%), Gaps = 57/320 (17%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-E 532
            +++ +  FQ++          +G G+ G+V +  ++    +++ A+K++++   K +  
Sbjct: 6   VLDWNDIKFQDV----------IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR 55

Query: 533 EFMTELKIIGR-THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHE---------- 581
           +F  EL+++ +  HH N++ LLG C       L  E  P+G L +FL             
Sbjct: 56  DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFA 115

Query: 582 -----GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAK 636
                       Q +  A  VARG+ YL ++   Q IH D+  +N+L+       NY+AK
Sbjct: 116 IANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG-----ENYVAK 167

Query: 637 ISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRH 696
           I+DFG+S+       +T    R  + ++A E L     TT  DV+S+GV+L EI+     
Sbjct: 168 IADFGLSRGQEVYVKKT--MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 225

Query: 697 IELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHP 756
                   E               +  +  Q      P    D      +  +   C   
Sbjct: 226 PYCGMTCAE---------------LYEKLPQGYRLEKPLNCDD-----EVYDLMRQCWRE 265

Query: 757 DPNLRPSMKKVIHMLEGTLE 776
            P  RPS  +++  L   LE
Sbjct: 266 KPYERPSFAQILVSLNRMLE 285

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (464), Expect = 2e-52
 Identities = 63/283 (22%), Positives = 128/283 (45%), Gaps = 33/283 (11%)

Query: 494 KLVGTGSSGKVYRGILRL--KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLV 550
           K++G+G+ G VY+G+     +  +I +A+K+L +    K N+E + E  ++    + ++ 
Sbjct: 15  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           RLLG C     +L + +LMP G L +++       G    +   + +A+G+ YL +    
Sbjct: 75  RLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR--- 130

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPEWL 669
           +++H D+  +NVL+      T    KI+DFG++KLL  ++        +  + ++A E +
Sbjct: 131 RLVHRDLAARNVLVK-----TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185

Query: 670 RNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVL 729
            +   T + DV+S+GV + E++                           S + S   +  
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKP---------------YDGIPASEISSILEKGE 230

Query: 730 VSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
               P + +       + M+ + C   D + RP  +++I    
Sbjct: 231 RLPQPPICT-----IDVYMIMVKCWMIDADSRPKFRELIIEFS 268

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (458), Expect = 4e-52
 Identities = 64/305 (20%), Positives = 117/305 (38%), Gaps = 41/305 (13%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILR-LKDTQIEIAVKKLEKDI-EKTN 531
           EI                  + +G G  G V++GI    ++  + +A+K  +    +   
Sbjct: 3   EIQRERIELG----------RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR 52

Query: 532 EEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRV 591
           E+F+ E   + +  H ++V+L+G    E+   ++ EL   G L +FL            +
Sbjct: 53  EKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLI 111

Query: 592 EIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT 651
             A  ++  L YL  +     +H DI  +NVL+      +N   K+ DFG+S+ +     
Sbjct: 112 LYAYQLSTALAYLESKR---FVHRDIAARNVLVS-----SNDCVKLGDFGLSRYMEDSTY 163

Query: 652 RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI 711
              +  +  + ++APE +     T+  DV+ FGV + EI+             +      
Sbjct: 164 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND------ 217

Query: 712 VLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHML 771
                VI  + +     +  + P  L  L            C   DP+ RP   ++   L
Sbjct: 218 -----VIGRIENGERLPMPPNCPPTLYSL---------MTKCWAYDPSRRPRFTELKAQL 263

Query: 772 EGTLE 776
              LE
Sbjct: 264 STILE 268

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (448), Expect = 1e-50
 Identities = 66/277 (23%), Positives = 114/277 (41%), Gaps = 33/277 (11%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRL 552
           + +G G+ G+V       + T+  +AVK ++        E    E+ I    +H+N+V+ 
Sbjct: 11  QTLGEGAYGEVQLA--VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 68

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQI 612
            G   E + + L  E    G L + +  +   P           +  G++YLH      I
Sbjct: 69  YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP-EPDAQRFFHQLMAGVVYLHGIG---I 124

Query: 613 IHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD-QTRTDTNMRGTMGYVAPEWLRN 671
            H DIKP+N+L     LD     KISDFG++ +   + + R    M GT+ YVAPE L+ 
Sbjct: 125 THRDIKPENLL-----LDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 179

Query: 672 VPV-TTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLV 730
                  VDV+S G++L  ++ G          ++  +     SDW          + + 
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGELPW------DQPSDSCQEYSDWKEKKTYLNPWKKI- 232

Query: 731 SHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKV 767
             D   L+ L +              +P+ R ++  +
Sbjct: 233 --DSAPLALLHK----------ILVENPSARITIPDI 257

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  178 bits (453), Expect = 1e-50
 Identities = 63/275 (22%), Positives = 113/275 (41%), Gaps = 28/275 (10%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           + +GTG+ G V+R     + T    A K +    E   E    E++ +    H  LV L 
Sbjct: 32  EELGTGAFGVVHRV--TERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH 89

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
               ++++ +++YE M  G L   +  E  +    + VE    V +GL ++HE      +
Sbjct: 90  DAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YV 146

Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP 673
           H D+KP+N++        +   K+ DFG++  L+  Q+   T   GT  + APE     P
Sbjct: 147 HLDLKPENIMFT---TKRSNELKLIDFGLTAHLDPKQSVKVT--TGTAEFAAPEVAEGKP 201

Query: 674 VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHD 733
           V    D++S GV+   ++ G         +E             +  + S +  +  S  
Sbjct: 202 VGYYTDMWSVGVLSYILLSGLSPFGGENDDE------------TLRNVKSCDWNMDDSAF 249

Query: 734 PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI 768
             +  D + F R           DPN R ++ + +
Sbjct: 250 SGISEDGKDFIR------KLLLADPNTRMTIHQAL 278

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (445), Expect = 2e-50
 Identities = 67/286 (23%), Positives = 111/286 (38%), Gaps = 36/286 (12%)

Query: 494 KLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNL 549
           + +G GS G V RG         + +AVK L+ D+    +  ++F+ E+  +    H+NL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73

Query: 550 VRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECE 609
           +RL G         +V EL P G+L + L               A+ VA G+ YL  +  
Sbjct: 74  IRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR- 131

Query: 610 TQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL--NKDQTRTDTNMRGTMGYVAPE 667
              IH D+  +N+LL      T  + KI DFG+ + L  N D      + +    + APE
Sbjct: 132 --FIHRDLAARNLLLA-----TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ 727
            L+    +   D + FGV L E+    +   +     +                    + 
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ--------------------IL 224

Query: 728 VLVSHDPEVLSDLERF-ERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
             +  + E L   E   + +  V + C    P  RP+   +   L 
Sbjct: 225 HKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 270

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (447), Expect = 3e-50
 Identities = 75/341 (21%), Positives = 146/341 (42%), Gaps = 60/341 (17%)

Query: 453 YYSPAARGLIKRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL- 511
           Y+S A        + + P+  E+   + T            + +G GS G VY G+ +  
Sbjct: 3   YFSAA--------DVYVPDEWEVAREKITMS----------RELGQGSFGMVYEGVAKGV 44

Query: 512 --KDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL 568
              + +  +A+K + +    +   EF+ E  ++   +  ++VRLLG  S+    L++ EL
Sbjct: 45  VKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 104

Query: 569 MPNGTLSNFLFHEGQR---------PGWVQRVEIALGVARGLLYLHEECETQIIHCDIKP 619
           M  G L ++L               P   + +++A  +A G+ YL+     + +H D+  
Sbjct: 105 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAA 161

Query: 620 QNVLLDLKTLDTNYMAKISDFGISKLLNK-DQTRTDTNMRGTMGYVAPEWLRNVPVTTKV 678
           +N +     +  ++  KI DFG+++ + + D  R        + +++PE L++   TT  
Sbjct: 162 RNCM-----VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 216

Query: 679 DVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLS 738
           DV+SFGV+L EI             E+           V+  ++   L     + P++L 
Sbjct: 217 DVWSFGVVLWEIATLAEQPYQGLSNEQ-----------VLRFVMEGGLLDKPDNCPDMLF 265

Query: 739 DLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGM 779
           +L            C   +P +RPS  ++I  ++  +E G 
Sbjct: 266 EL---------MRMCWQYNPKMRPSFLEIISSIKEEMEPGF 297

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (441), Expect = 2e-49
 Identities = 60/275 (21%), Positives = 112/275 (40%), Gaps = 32/275 (11%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           + +G G+SG VY        T  E+A++++    +   E  + E+ ++    + N+V  L
Sbjct: 26  EKIGQGASGTVYTA--MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL 83

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
                 D+  +V E +  G+L++ +          Q   +     + L +LH     Q+I
Sbjct: 84  DSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHSN---QVI 138

Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP 673
           H DIK  N+L     L  +   K++DFG    +  +Q++  + M GT  ++APE +    
Sbjct: 139 HRDIKSDNIL-----LGMDGSVKLTDFGFCAQITPEQSKR-STMVGTPYWMAPEVVTRKA 192

Query: 674 VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHD 733
              KVD++S G+M +E+I G         E     + ++ ++          L       
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEP---PYLNENPLRALYLIATNGTPELQNPEKL------- 242

Query: 734 PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI 768
             +  D             C   D   R S K+++
Sbjct: 243 SAIFRDFLN---------RCLDMDVEKRGSAKELL 268

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  172 bits (436), Expect = 3e-48
 Identities = 57/275 (20%), Positives = 104/275 (37%), Gaps = 28/275 (10%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           + +G+G+ G V+R     K T      K +             E+ I+ + HH  L+ L 
Sbjct: 35  EELGSGAFGVVHRC--VEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLH 92

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
               ++ + +L+ E +  G L + +  E  +    + +        GL ++HE     I+
Sbjct: 93  DAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIV 149

Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP 673
           H DIKP+N++ +          KI DFG++  LN D+         T  + APE +   P
Sbjct: 150 HLDIKPENIMCE---TKKASSVKIIDFGLATKLNPDEIV--KVTTATAEFAAPEIVDREP 204

Query: 674 VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHD 733
           V    D+++ GV+   ++ G              E D+     V  C    +     S  
Sbjct: 205 VGFYTDMWAIGVLGYVLLSGLSPFA--------GEDDLETLQNVKRCDWEFDEDAFSSVS 256

Query: 734 PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI 768
           PE    ++               +P  R ++   +
Sbjct: 257 PEAKDFIKN----------LLQKEPRKRLTVHDAL 281

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  169 bits (428), Expect = 1e-47
 Identities = 70/331 (21%), Positives = 124/331 (37%), Gaps = 59/331 (17%)

Query: 468 FDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLE 524
           +D +  E                   K +G G+ G+V            T   +AVK L+
Sbjct: 3   YDASKWEFPRDRLKLG----------KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 52

Query: 525 KD-IEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRL-LVYELMPNGTLSNFLFHE 581
           +      +   M+ELKI+    HH N+V LLG C++    L ++ E    G LS +L  +
Sbjct: 53  EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 112

Query: 582 GQRP---------------GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDL 626
                                   +  +  VA+G+ +L      + IH D+  +N+LL  
Sbjct: 113 RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLS- 168

Query: 627 KTLDTNYMAKISDFGISKLLNKDQTRT-DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGV 685
                  + KI DFG+++ + KD       + R  + ++APE + +   T + DV+SFGV
Sbjct: 169 ----EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 224

Query: 686 MLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFER 745
           +L EI                    + + +     +          +    +        
Sbjct: 225 LLWEIFSLGASP----------YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT----- 269

Query: 746 MAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE 776
                L C H +P+ RP+  +++  L   L+
Sbjct: 270 ----MLDCWHGEPSQRPTFSELVEHLGNLLQ 296

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  168 bits (427), Expect = 1e-47
 Identities = 72/327 (22%), Positives = 129/327 (39%), Gaps = 61/327 (18%)

Query: 474 EINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILR-----LKDTQIEIAVKKLEKD-I 527
           E+                  K +G G+ G+V             +   ++AVK L+ D  
Sbjct: 9   ELPRDRLVLG----------KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 58

Query: 528 EKTNEEFMTELKIIGR-THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPG 586
           EK   + ++E++++     HKN++ LLG C+++    ++ E    G L  +L        
Sbjct: 59  EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 118

Query: 587 ---------------WVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDT 631
                              V  A  VARG+ YL  +   + IH D+  +NVL+       
Sbjct: 119 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT-----E 170

Query: 632 NYMAKISDFGISKLLNKDQTRTDT-NMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEI 690
           + + KI+DFG+++ ++       T N R  + ++APE L +   T + DV+SFGV+L EI
Sbjct: 171 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 230

Query: 691 ICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVG 750
                        EE               +     +      P   +       + M+ 
Sbjct: 231 FTLGGSPYPGVPVEE---------------LFKLLKEGHRMDKPSNCT-----NELYMMM 270

Query: 751 LWCNHPDPNLRPSMKKVIHMLEGTLEV 777
             C H  P+ RP+ K+++  L+  + +
Sbjct: 271 RDCWHAVPSQRPTFKQLVEDLDRIVAL 297

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  165 bits (419), Expect = 2e-46
 Identities = 65/279 (23%), Positives = 113/279 (40%), Gaps = 29/279 (10%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLV 550
           F  ++GTG+  +V       K TQ  +A+K + K  +E        E+ ++ +  H N+V
Sbjct: 13  FRDVLGTGAFSEVILA--EDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 70

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
            L           L+ +L+  G L + +  +G          +   V   + YLH+    
Sbjct: 71  ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-ERDASRLIFQVLDAVKYLHDLG-- 127

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
            I+H D+KP+N+L     LD +    ISDFG+SK+ +     +     GT GYVAPE L 
Sbjct: 128 -IVHRDLKPENLLYYS--LDEDSKIMISDFGLSKMEDPGSVLST--ACGTPGYVAPEVLA 182

Query: 671 NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLV 730
             P +  VD +S GV+   ++CG          +            +   +L    +   
Sbjct: 183 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK------------LFEQILKAEYEFDS 230

Query: 731 SHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH 769
            +  ++    + F R           DP  R + ++ + 
Sbjct: 231 PYWDDISDSAKDFIR------HLMEKDPEKRFTCEQALQ 263

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (416), Expect = 3e-46
 Identities = 56/285 (19%), Positives = 99/285 (34%), Gaps = 37/285 (12%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD---IEKTNEEFMTELKIIGRTHHKN 548
           F K++G GS   V     R   T  E A+K LEK     E        E  ++ R  H  
Sbjct: 12  FGKILGEGSFSTVVLA--RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
            V+L     +++K         NG L  ++   G               A  +  L    
Sbjct: 70  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLH 125

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTN-MRGTMGYVAPE 667
              IIH D+KP+N+L     L+ +   +I+DFG +K+L+ +  +   N   GT  YV+PE
Sbjct: 126 GKGIIHRDLKPENIL-----LNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 180

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ 727
            L         D+++ G ++ +++ G                           +  + ++
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL----------------IFQKIIK 224

Query: 728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
           +      +            +  L     D   R   +++     
Sbjct: 225 LEYDFPEKFFPKARDL----VEKLLV--LDATKRLGCEEMEGYGP 263

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  160 bits (407), Expect = 1e-44
 Identities = 42/274 (15%), Positives = 94/274 (34%), Gaps = 29/274 (10%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           + +G G  G V+R       ++     K ++            E+ I+    H+N++ L 
Sbjct: 11  EDLGRGEFGIVHRC--VETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLH 67

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
                 ++ ++++E +    +   +          + V     V   L +LH      I 
Sbjct: 68  ESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIG 124

Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVP 673
           H DI+P+N++        +   KI +FG ++ L          +     Y APE  ++  
Sbjct: 125 HFDIRPENIIYQ---TRRSSTIKIIEFGQARQLKPGDNF--RLLFTAPEYYAPEVHQHDV 179

Query: 674 VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHD 733
           V+T  D++S G ++  ++ G         ++            +I  +++          
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINPFLAETNQQ------------IIENIMNAEYTFDEEAF 227

Query: 734 PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKV 767
            E+  +   F             +   R +  + 
Sbjct: 228 KEISIEAMDFVD------RLLVKERKSRMTASEA 255

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  154 bits (389), Expect = 1e-42
 Identities = 56/289 (19%), Positives = 105/289 (36%), Gaps = 39/289 (13%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLV 550
           +++G G   +V+    R      ++AVK L  D+         F  E +     +H  +V
Sbjct: 13  EILGFGGMSEVHLA--RDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV 70

Query: 551 RLLGFCSEEDKRL----LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE 606
            +      E        +V E +   TL + +  EG      + +E+     + L + H+
Sbjct: 71  AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT-PKRAIEVIADACQALNFSHQ 129

Query: 607 ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD--TNMRGTMGYV 664
                IIH D+KP N+++           K+ DFGI++ +            + GT  Y+
Sbjct: 130 NG---IIHRDVKPANIMIS-----ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 181

Query: 665 APEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR 724
           +PE  R   V  + DV+S G +L E++ G                       V    +  
Sbjct: 182 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS------------VAYQHVRE 229

Query: 725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-SMKKVIHMLE 772
           +     +    + +DL+     A+        +P  R  +  ++   L 
Sbjct: 230 DPIPPSARHEGLSADLDAVVLKAL------AKNPENRYQTAAEMRADLV 272

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  154 bits (389), Expect = 2e-42
 Identities = 40/285 (14%), Positives = 95/285 (33%), Gaps = 27/285 (9%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           + +G GS G ++ G         ++A+K   +       +   E +          +  +
Sbjct: 11  RRIGEGSFGVIFEG--TNLLNNQQVAIKFEPR--RSDAPQLRDEYRTYKLLAGCTGIPNV 66

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
            +  +E    ++   +   +L + L   G++         A  +   +  +HE+    ++
Sbjct: 67  YYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LV 123

Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD------TNMRGTMGYVAPE 667
           + DIKP N L+         M  + DFG+ K      T+         N+ GT  Y++  
Sbjct: 124 YRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSIN 183

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ 727
                  + + D+ + G + +  + G    +  +     ++      + +     S  L+
Sbjct: 184 THLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKY-----ERIGEKKQSTPLR 238

Query: 728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
            L +  PE                +  +   +  P    +  +  
Sbjct: 239 ELCAGFPEEFYKYMH---------YARNLAFDATPDYDYLQGLFS 274

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (392), Expect = 2e-42
 Identities = 61/282 (21%), Positives = 113/282 (40%), Gaps = 32/282 (11%)

Query: 493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRL 552
           S+++G G +GKV +     K TQ + A+K L +D  K   E     +        ++VR+
Sbjct: 17  SQVLGLGINGKVLQI--FNKRTQEKFALKML-QDCPKARREVELHWRAS---QCPHIVRI 70

Query: 553 LGFC----SEEDKRLLVYELMPNGTLSNFLFHEGQRP-GWVQRVEIALGVARGLLYLHEE 607
           +       +     L+V E +  G L + +   G +     +  EI   +   + YLH  
Sbjct: 71  VDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 130

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               I H D+KP+N+L    +   N + K++DFG +K      + T      T  YVAPE
Sbjct: 131 ---NIAHRDVKPENLLYT--SKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPE 183

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ 727
            L         D++S GV++  ++CG                 + +S  + + +     +
Sbjct: 184 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFY--------SNHGLAISPGMKTRIRMGQYE 235

Query: 728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH 769
                  EV  +++   R           +P  R ++ + ++
Sbjct: 236 FPNPEWSEVSEEVKMLIR------NLLKTEPTQRMTITEFMN 271

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  153 bits (388), Expect = 3e-42
 Identities = 47/285 (16%), Positives = 103/285 (36%), Gaps = 29/285 (10%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           + +G+GS G +Y G         E+A+K     ++  + +   E KI         +  +
Sbjct: 13  RKIGSGSFGDIYLG--TDIAAGEEVAIKLE--CVKTKHPQLHIESKIYKMMQGGVGIPTI 68

Query: 554 GFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQII 613
            +C  E    ++   +   +L +      ++      + +A  +   + Y+H +     I
Sbjct: 69  RWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFI 125

Query: 614 HCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTD------TNMRGTMGYVAPE 667
           H D+KP N L+ L       +  I DFG++K     +T          N+ GT  Y +  
Sbjct: 126 HRDVKPDNFLMGLG--KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASIN 183

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ 727
               +  + + D+ S G +L+    G    +  +   + ++      + +    +S  ++
Sbjct: 184 THLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY-----ERISEKKMSTPIE 238

Query: 728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE 772
           VL    P   +             +C     + +P    +  +  
Sbjct: 239 VLCKGYPSEFATYLN---------FCRSLRFDDKPDYSYLRQLFR 274

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  154 bits (389), Expect = 1e-41
 Identities = 65/280 (23%), Positives = 109/280 (38%), Gaps = 40/280 (14%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNE------EFMTELKIIGRTH 545
             +++G G  G+VY    R  DT    A+K L+K   K  +           L ++    
Sbjct: 8   VHRIIGRGGFGEVYGC--RKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 65

Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
              +V +       DK   + +LM  G L   L  +            A  +  GL ++H
Sbjct: 66  CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEHMH 124

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                 +++ D+KP N+L     LD +   +ISD G++   +K +        GT GY+A
Sbjct: 125 NRF---VVYRDLKPANIL-----LDEHGHVRISDLGLACDFSKKKP---HASVGTHGYMA 173

Query: 666 PEWL-RNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR 724
           PE L + V   +  D FS G ML +++ G       + +++ E         +    L+ 
Sbjct: 174 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE---------IDRMTLTM 224

Query: 725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSM 764
            +++  S  PE+ S LE               D N R   
Sbjct: 225 AVELPDSFSPELRSLLEG----------LLQRDVNRRLGC 254

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (383), Expect = 1e-41
 Identities = 62/282 (21%), Positives = 115/282 (40%), Gaps = 33/282 (11%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN------EEFMTELKIIGRTHHK 547
           + +G+G    V +   R K T ++ A K ++K   K++      E+   E+ I+    H 
Sbjct: 16  EELGSGQFAVVKKC--REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
           N++ L      +   +L+ EL+  G L +F   E +     +  E    +  G+ YLH  
Sbjct: 74  NVITLHEVYENKTDVILILELVAGGELFDF-LAEKESLTEEEATEFLKQILNGVYYLHSL 132

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               I H D+KP+N++L  +        KI DFG++  ++        N+ GT  +VAPE
Sbjct: 133 Q---IAHFDLKPENIMLLDRN-VPKPRIKIIDFGLAHKIDFGNEFK--NIFGTPEFVAPE 186

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ 727
            +   P+  + D++S GV+   ++ G         +E                 L+    
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE----------------TLANVSA 230

Query: 728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH 769
           V    + E  S+     +  +  L     DP  R +++  + 
Sbjct: 231 VNYEFEDEYFSNTSALAKDFIRRLLV--KDPKKRMTIQDSLQ 270

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (384), Expect = 2e-41
 Identities = 63/281 (22%), Positives = 105/281 (37%), Gaps = 38/281 (13%)

Query: 492 FSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE---FMTELKIIGRT-HHK 547
             K++G GS GKV+      K T    A+K L+KD+   +++    M E +++     H 
Sbjct: 6   LHKMLGKGSFGKVFLA--EFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 63

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            L  +      ++    V E +  G L   +    +     +    A  +  GL +L   
Sbjct: 64  FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFD-LSRATFYAAEIILGLQFL--- 119

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
               I++ D+K  N+LLD      +   KI+DFG+ K       +      GT  Y+APE
Sbjct: 120 HSKGIVYRDLKLDNILLD-----KDGHIKIADFGMCKENMLGDAK-TNTFCGTPDYIAPE 173

Query: 668 WLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQ 727
            L        VD +SFGV+L E++ G+        EE            +   +   N  
Sbjct: 174 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE------------LFHSIRMDNPF 221

Query: 728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI 768
                + E    L +              +P  R  ++  I
Sbjct: 222 YPRWLEKEAKDLLVK----------LFVREPEKRLGVRGDI 252

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  150 bits (379), Expect = 4e-41
 Identities = 60/291 (20%), Positives = 117/291 (40%), Gaps = 47/291 (16%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEK---------DIEKTNEEFMTELKIIGRT 544
           +++G G S  V R     K T  E AVK ++          ++++  E  + E+ I+ + 
Sbjct: 9   EILGRGVSSVVRRC--IHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 66

Query: 545 H-HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLY 603
             H N+++L           LV++LM  G L ++L  E       +  +I   +   +  
Sbjct: 67  SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICA 125

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           LH+     I+H D+KP+N+L     LD +   K++DFG S  L+  +      + GT  Y
Sbjct: 126 LHKLN---IVHRDLKPENIL-----LDDDMNIKLTDFGFSCQLDPGEKL--REVCGTPSY 175

Query: 664 VAPEWLR------NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV 717
           +APE +       +     +VD++S GV++  ++ G       +               +
Sbjct: 176 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML------------M 223

Query: 718 ISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI 768
           +  ++S N Q       +    ++                P  R + ++ +
Sbjct: 224 LRMIMSGNYQFGSPEWDDYSDTVKDLVS------RFLVVQPQKRYTAEEAL 268

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (380), Expect = 4e-41
 Identities = 63/298 (21%), Positives = 110/298 (36%), Gaps = 42/298 (14%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-----IEKTNEEFMTELKIIGRTHHKN 548
             +G G    VY+   R K+T   +A+KK++        +  N   + E+K++    H N
Sbjct: 4   DFLGEGQFATVYKA--RDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPN 61

Query: 549 LVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC 608
           ++ LL     +    LV++ M        +                L   +GL YLH+  
Sbjct: 62  IIGLLDAFGHKSNISLVFDFMETDLEV-IIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW 120

Query: 609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEW 668
              I+H D+KP N+LLD      N + K++DFG++K          T+   T  Y APE 
Sbjct: 121 ---ILHRDLKPNNLLLD-----ENGVLKLADFGLAKSFGSPNR-AYTHQVVTRWYRAPEL 171

Query: 669 LRNV-PVTTKVDVFSFGVMLLEIICGR---------------RHIELSRVEEESEEVDIV 712
           L         VD+++ G +L E++                       +  EE+  ++  +
Sbjct: 172 LFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL 231

Query: 713 LSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM 770
                        L  + S   + L DL +              +P  R +  + + M
Sbjct: 232 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQ---------GLFLFNPCARITATQALKM 280

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  150 bits (380), Expect = 6e-41
 Identities = 64/249 (25%), Positives = 114/249 (45%), Gaps = 24/249 (9%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLV 550
           + +GTGS G+V+    R +      A+K L+K+I    K  E    E  ++    H  ++
Sbjct: 10  RTLGTGSFGRVHLI--RSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFII 67

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
           R+ G   +  +  ++ + +  G L + L    + P  V +   A  V   L YLH +   
Sbjct: 68  RMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLHSKD-- 124

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
            II+ D+KP+N+L     LD N   KI+DFG +K +          + GT  Y+APE + 
Sbjct: 125 -IIYRDLKPENIL-----LDKNGHIKITDFGFAKYVPDVTYT----LCGTPDYIAPEVVS 174

Query: 671 NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQVLV 730
             P    +D +SFG+++ E++ G      S   +  E+  I+ ++       + +++ L+
Sbjct: 175 TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEK--ILNAELRFPPFFNEDVKDLL 232

Query: 731 SH----DPE 735
           S     D  
Sbjct: 233 SRLITRDLS 241

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (371), Expect = 4e-40
 Identities = 60/284 (21%), Positives = 103/284 (36%), Gaps = 49/284 (17%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE------FMTELKIIGR--TH 545
            L+G+G  G VY G        + +A+K +EKD      E         E+ ++ +  + 
Sbjct: 10  PLLGSGGFGSVYSG--IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67

Query: 546 HKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
              ++RLL +    D  +L+ E             E               V   + +  
Sbjct: 68  FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC- 126

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                 ++H DIK +N+L+DL         K+ DFG   LL        T+  GT  Y  
Sbjct: 127 --HNCGVLHRDIKDENILIDLN----RGELKLIDFGSGALLKDTVY---TDFDGTRVYSP 177

Query: 666 PEWLRNVPVTTK-VDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR 724
           PEW+R      +   V+S G++L +++CG    E         + +I+         +S 
Sbjct: 178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--------HDEEIIRGQVFFRQRVSS 229

Query: 725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI 768
             Q L+                     WC    P+ RP+ +++ 
Sbjct: 230 ECQHLIR--------------------WCLALRPSDRPTFEEIQ 253

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (366), Expect = 9e-39
 Identities = 66/308 (21%), Positives = 113/308 (36%), Gaps = 39/308 (12%)

Query: 478 REFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTE 537
           +E ++ +         K++G GS G VY+   +L D+   +A+KK+ +D          E
Sbjct: 18  QEVSYTDT--------KVIGNGSFGVVYQA--KLCDSGELVAIKKVLQD----KRFKNRE 63

Query: 538 LKIIGRTHHKNLVRLLGFCSEEDKR------LLVYELMPNGTLSNFLFH--EGQRPGWVQ 589
           L+I+ +  H N+VRL  F     ++       LV + +P         +    Q    + 
Sbjct: 64  LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123

Query: 590 RVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD 649
                  + R L Y+H      I H DIKPQN+LLD        + K+ DFG +K L + 
Sbjct: 124 VKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLD----PDTAVLKLCDFGSAKQLVRG 176

Query: 650 QTRTDTNMRGTMGYVAP-EWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEE 708
           +            Y AP         T+ +DV+S G +L E++ G+         ++  E
Sbjct: 177 EPNVSYICS--RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234

Query: 709 VDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVG-------LWCNHPDPNLR 761
           +  VL       +   N        P++ +                          P  R
Sbjct: 235 IIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTAR 294

Query: 762 PSMKKVIH 769
            +  +   
Sbjct: 295 LTPLEACA 302

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  141 bits (357), Expect = 3e-38
 Identities = 55/284 (19%), Positives = 110/284 (38%), Gaps = 21/284 (7%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKL--EKDIEKTNEEFMTELKIIGRTHHKNLVR 551
           + +G G+ G VY+            A+KK+  EK+ E      + E+ I+    H N+V+
Sbjct: 8   EKIGEGTYGVVYKAQNN---YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVK 64

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L      + + +LV+E +           EG     V      L +  G+ Y H+     
Sbjct: 65  LYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLE-SVTAKSFLLQLLNGIAYCHDRR--- 120

Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           ++H D+KPQN+L++          KI+DFG+++       +    +           + +
Sbjct: 121 VLHRDLKPQNLLIN-----REGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS 175

Query: 672 VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL-----SDWVISCMLSRNL 726
              +T +D++S G +  E++ G          ++   +  +L      +W     L +  
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235

Query: 727 QVLVSHDPEVLSDLERFERMAMVGL--WCNHPDPNLRPSMKKVI 768
                ++P       +    + + L       DPN R + K+ +
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (356), Expect = 6e-38
 Identities = 63/299 (21%), Positives = 119/299 (39%), Gaps = 44/299 (14%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKL-----EKDIEKTNEEFMTELKIIGRTHHKN 548
             +G G+ GKV++    LK+    +A+K++     E+ +  +    +  L+ +    H N
Sbjct: 13  AEIGEGAYGKVFKAR-DLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPN 71

Query: 549 LVRLLGFCS-----EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLY 603
           +VRL   C+      E K  LV+E +     +                ++   + RGL +
Sbjct: 72  VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 131

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGY 663
           LH      ++H D+KPQN+L+      ++   K++DFG++++ +     T  ++  T+ Y
Sbjct: 132 LHSHR---VVHRDLKPQNILVT-----SSGQIKLADFGLARIYSFQMALT--SVVVTLWY 181

Query: 664 VAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR--------------HIELSRVEEESEEV 709
            APE L      T VD++S G +  E+   +                  +    EE    
Sbjct: 182 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 241

Query: 710 DIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI 768
           D+ L         ++ ++  V+   E+  DL            C   +P  R S    +
Sbjct: 242 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLL---------KCLTFNPAKRISAYSAL 291

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (357), Expect = 1e-37
 Identities = 57/290 (19%), Positives = 109/290 (37%), Gaps = 25/290 (8%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN-EEFMTELKIIGRTHHKNLVRL 552
             +G G+ G V          ++ +A+KK+     +T  +  + E+KI+ R  H+N++ +
Sbjct: 14  SYIGEGAYGMVCSA--YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 71

Query: 553 LGFCSEEDKRLLVYELMPNGTLSNFLFH--EGQRPGWVQRVEIALGVARGLLYLHEECET 610
                      +    +    +   L+   + Q             + RGL Y+H     
Sbjct: 72  NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA--- 128

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR--TDTNMRGTMGYVAPEW 668
            ++H D+KP N+L     L+T    KI DFG++++ + D       T    T  Y APE 
Sbjct: 129 NVLHRDLKPSNLL-----LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 183

Query: 669 LRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL-----SDWVISCML 722
           + N    T  +D++S G +L E++  R         ++   +  +L      D      L
Sbjct: 184 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 243

Query: 723 SRNLQVLVSHDPEVLSDLERFERMAMVGL----WCNHPDPNLRPSMKKVI 768
                +L       +     F       L         +P+ R  +++ +
Sbjct: 244 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 293

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (350), Expect = 4e-37
 Identities = 58/285 (20%), Positives = 103/285 (36%), Gaps = 19/285 (6%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVR 551
           + +G G+ G VY+   R K T   +A+KK+  D   E      + E+ ++   +H N+V+
Sbjct: 8   EKIGEGTYGVVYKA--RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           LL     E+K  LV+E +                           + +GL + H      
Sbjct: 66  LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 122

Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           ++H D+KPQN+L     ++T    K++DFG+++            +           L  
Sbjct: 123 VLHRDLKPQNLL-----INTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177

Query: 672 VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL-----SDWVISCMLSRNL 726
              +T VD++S G +  E++  R         ++   +   L       W     +    
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 237

Query: 727 QVLVSHDPEVLSDLERFERMAMVGL--WCNHPDPNLRPSMKKVIH 769
                   +  S +          L     H DPN R S K  + 
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (339), Expect = 2e-35
 Identities = 58/206 (28%), Positives = 86/206 (41%), Gaps = 15/206 (7%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEE---FMTELKIIGRTHHKNLV 550
           KL+G G+ GKV     R K T    A+K L K++    +E    +TE +++  T H  L 
Sbjct: 11  KLLGKGTFGKVILV--REKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT 68

Query: 551 RLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECET 610
            L       D+   V E    G L   L     R             A  +  L      
Sbjct: 69  ALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHSR 124

Query: 611 QIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLR 670
            +++ DIK +N++LD      +   KI+DFG+ K    D         GT  Y+APE L 
Sbjct: 125 DVVYRDIKLENLMLD-----KDGHIKITDFGLCKEGISDGATMK-TFCGTPEYLAPEVLE 178

Query: 671 NVPVTTKVDVFSFGVMLLEIICGRRH 696
           +      VD +  GV++ E++CGR  
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (335), Expect = 3e-35
 Identities = 47/286 (16%), Positives = 104/286 (36%), Gaps = 21/286 (7%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVR 551
           + +G G+ G V++   + ++T   +A+K++  D   E      + E+ ++    HKN+VR
Sbjct: 8   EKIGEGTYGTVFKA--KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65

Query: 552 LLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ 611
           L      + K  LV+E        +   +     G +    +   + + L  L       
Sbjct: 66  LHDVLHSDKKLTLVFEFCDQ----DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121

Query: 612 IIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN 671
           ++H D+KPQN+L     ++ N   K+++FG+++            +              
Sbjct: 122 VLHRDLKPQNLL-----INRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176

Query: 672 VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEES----EEVDIVLSDWVISCMLSRNLQ 727
              +T +D++S G +  E+    R +      ++       +    ++     M      
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236

Query: 728 VLVSHDPEVLSDLERFERMAMVGL----WCNHPDPNLRPSMKKVIH 769
                 P   S +    ++   G          +P  R S ++ + 
Sbjct: 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (322), Expect = 3e-33
 Identities = 54/298 (18%), Positives = 111/298 (37%), Gaps = 35/298 (11%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKL--EKDIEKTNEEFMTELKIIGRTHHKNLVR 551
             +G G+ G+V++   R + T  ++A+KK+  E + E      + E+KI+    H+N+V 
Sbjct: 16  AKIGQGTFGEVFKA--RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 73

Query: 552 LLGFCSEEDKR--------LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLY 603
           L+  C  +            LV++   +           +        EI   +   L  
Sbjct: 74  LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS----EIKRVMQMLLNG 129

Query: 604 LHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR---GT 660
           L+     +I+H D+K  NVL     +  + + K++DFG+++  +  +            T
Sbjct: 130 LYYIHRNKILHRDMKAANVL-----ITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVT 184

Query: 661 MGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRR-------HIELSRVEEESEEVDIV 712
           + Y  PE L         +D++  G ++ E+              +L+ + +    +   
Sbjct: 185 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 244

Query: 713 LSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVG---LWCNHPDPNLRPSMKKV 767
           +   V +  L   L+++     +V   L+ + R              DP  R      
Sbjct: 245 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (321), Expect = 8e-33
 Identities = 62/314 (19%), Positives = 122/314 (38%), Gaps = 41/314 (13%)

Query: 480 FTFQELQEATKGFS------KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTN 531
           F  QE+ +            + VG+G+ G V         T  ++A+KKL +    E   
Sbjct: 4   FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSA--VDGRTGAKVAIKKLYRPFQSELFA 61

Query: 532 EEFMTELKIIGRTHHKNLVRLLGFCSEEDKR------LLVYELMPNGTLSNFLFHEGQRP 585
           +    EL+++    H+N++ LL   + ++         LV   M           + ++ 
Sbjct: 62  KRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGT---DLGKLMKHEKL 118

Query: 586 GWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL 645
           G  +   +   + +GL Y+H      IIH D+KP N+      ++ +   KI DFG+++ 
Sbjct: 119 GEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLA-----VNEDCELKILDFGLARQ 170

Query: 646 LNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGR---RHIELSR 701
            + +     T    T  Y APE + N +  T  VD++S G ++ E+I G+   +  +   
Sbjct: 171 ADSEM----TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD 226

Query: 702 VEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSD--LERFERMAMVGL----WCNH 755
             +E  +V        +  + S   +  +   PE+            + + +        
Sbjct: 227 QLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLV 286

Query: 756 PDPNLRPSMKKVIH 769
            D   R +  + + 
Sbjct: 287 LDAEQRVTAGEALA 300

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  125 bits (315), Expect = 5e-32
 Identities = 54/246 (21%), Positives = 101/246 (41%), Gaps = 30/246 (12%)

Query: 453 YYSPAARGLIKRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLK 512
           + + A    +K+      N+ +++     F  +        K +GTGS G+V     + K
Sbjct: 18  FLAKAKEDFLKKWETPSQNTAQLD----QFDRI--------KTLGTGSFGRVMLV--KHK 63

Query: 513 DTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELM 569
           ++    A+K L+K      K  E  + E +I+   +   LV+L     +     +V E +
Sbjct: 64  ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 123

Query: 570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTL 629
             G + + L   G+          A  +     YLH      +I+ D+KP+N+L     +
Sbjct: 124 AGGEMFSHLRRIGRFS-EPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLL-----I 174

Query: 630 DTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLE 689
           D     +++DFG +    K        + GT   +APE + +      VD ++ GV++ E
Sbjct: 175 DQQGYIQVTDFGFA----KRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYE 230

Query: 690 IICGRR 695
           +  G  
Sbjct: 231 MAAGYP 236

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (310), Expect = 1e-31
 Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 17/210 (8%)

Query: 494 KLVGTGSSGKVYRGI-LRLKDTQIEIAVKKLEKDI----EKTNEEFMTELKIIGR-THHK 547
           K++GTG+ GKV+    +   DT    A+K L+K       KT E   TE +++       
Sbjct: 30  KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 89

Query: 548 NLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE 607
            LV L      E K  L+ + +  G L   L    +        E+ + V   +L L   
Sbjct: 90  FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH----EVQIYVGEIVLALEHL 145

Query: 608 CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPE 667
            +  II+ DIK +N+L     LD+N    ++DFG+SK    D+T    +  GT+ Y+AP+
Sbjct: 146 HKLGIIYRDIKLENIL-----LDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD 200

Query: 668 WLR--NVPVTTKVDVFSFGVMLLEIICGRR 695
            +R  +      VD +S GV++ E++ G  
Sbjct: 201 IVRGGDSGHDKAVDWWSLGVLMYELLTGAS 230

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  121 bits (303), Expect = 1e-30
 Identities = 53/325 (16%), Positives = 106/325 (32%), Gaps = 45/325 (13%)

Query: 463 KRRNYFDPNSMEINFREFTFQELQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKK 522
           + R Y+D  S  + +      +L        + +G G   +V+           ++ VK 
Sbjct: 17  RPREYWDYESHVVEWGNQDDYQLV-------RKLGRGKYSEVFEA--INITNNEKVVVKI 67

Query: 523 LEKDIEKTNEEFMTELKIIGR-THHKNLVRLLGFCSEEDKRL--LVYELMPNGTLSNFLF 579
           L+   +K   +   E+KI+       N++ L     +   R   LV+E + N        
Sbjct: 68  LKPVKKK---KIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY- 123

Query: 580 HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD 639
              Q             + + L Y H      I+H D+KP NV++D +    +   ++ D
Sbjct: 124 ---QTLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHE----HRKLRLID 173

Query: 640 FGISKLLNKDQTRTDTNMRGTMGYVAPE-WLRNVPVTTKVDVFSFGVMLLEIICGRRHIE 698
           +G+++  +  Q         +  +  PE  +        +D++S G ML  +I  +    
Sbjct: 174 WGLAEFYHPGQEYN--VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 231

Query: 699 LSRVEEESEEVDI------VLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLW 752
                 +             L D++    +  + +             ERF       L 
Sbjct: 232 HGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLV 291

Query: 753 ----------CNHPDPNLRPSMKKV 767
                         D   R + ++ 
Sbjct: 292 SPEALDFLDKLLRYDHQSRLTAREA 316

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (295), Expect = 2e-29
 Identities = 48/209 (22%), Positives = 83/209 (39%), Gaps = 24/209 (11%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN--EEFMTELKIIGRTHHKNLVR 551
           K +G+G+ G V             +A+KKL +  +     +    EL ++   +HKN++ 
Sbjct: 23  KPIGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80

Query: 552 LLGFCS------EEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLH 605
           LL   +      E     LV ELM                   +   +   +  G+ +LH
Sbjct: 81  LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLH 136

Query: 606 EECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA 665
                 IIH D+KP N       + ++   KI DFG+++          T    T  Y A
Sbjct: 137 SAG---IIHRDLKPSN-----IVVKSDCTLKILDFGLARTAGTSFMM--TPYVVTRYYRA 186

Query: 666 PEWLRNVPVTTKVDVFSFGVMLLEIICGR 694
           PE +  +     VD++S G ++ E++  +
Sbjct: 187 PEVILGMGYKENVDIWSVGCIMGEMVRHK 215

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (288), Expect = 2e-28
 Identities = 59/311 (18%), Positives = 109/311 (35%), Gaps = 33/311 (10%)

Query: 479 EFTFQELQEATKGFS------KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTN- 531
            F  QEL +              VG+G+ G V         T + +AVKKL +  +    
Sbjct: 3   TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIH 60

Query: 532 -EEFMTELKIIGRTHHKNLVRLLGFCSEEDK---RLLVYELMPNGTLSNFLFHEGQRPGW 587
            +    EL+++    H+N++ LL   +          VY +            + Q+   
Sbjct: 61  AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 120

Query: 588 VQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN 647
                +   + RGL Y+H      IIH D+KP N+      ++ +   KI DFG+++  +
Sbjct: 121 DHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLA-----VNEDCELKILDFGLARHTD 172

Query: 648 KDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR-------HIELS 700
            + T     +           L  +     VD++S G ++ E++ GR          +L 
Sbjct: 173 DEMT---GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLK 229

Query: 701 RVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGL--WCNHPDP 758
            +          L   + S      +Q L        +++        V L       D 
Sbjct: 230 LILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDS 289

Query: 759 NLRPSMKKVIH 769
           + R +  + + 
Sbjct: 290 DKRITAAQALA 300

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  114 bits (286), Expect = 3e-28
 Identities = 47/241 (19%), Positives = 92/241 (38%), Gaps = 25/241 (10%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLL 553
           + +G G    V+    +       +A+K +  D +   E    E+K++ R +  +  +  
Sbjct: 19  RKLGWGHFSTVWLA--KDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKED 75

Query: 554 GFCSEEDKRLLVY---------------ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVA 598
              +    +LL +               E++    L+    +E +    +   +I+  + 
Sbjct: 76  SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLL 135

Query: 599 RGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMR 658
            GL Y+H  C   IIH DIKP+NVL+++     +    +    I+ L N           
Sbjct: 136 LGLDYMHRRC--GIIHTDIKPENVLMEIV----DSPENLIQIKIADLGNACWYDEHYTNS 189

Query: 659 -GTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV 717
             T  Y +PE L   P     D++S   ++ E+I G    E       +++ D +     
Sbjct: 190 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 249

Query: 718 I 718
           +
Sbjct: 250 L 250

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 77.1 bits (189), Expect = 8e-17
 Identities = 33/207 (15%), Positives = 59/207 (28%), Gaps = 32/207 (15%)

Query: 494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI----------EKTNEEFMTELKIIGR 543
           KL+G G    V+           E  VK  +             +  +  F        R
Sbjct: 6   KLMGEGKESAVFNCYSE---KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSAR 62

Query: 544 THHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQR-VEIALGVARGLL 602
              + L +L G    +      Y    N  L   +  +      V+   E+   +   + 
Sbjct: 63  NEFRALQKLQGLAVPKV-----YAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVA 117

Query: 603 YLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQTRTDTNMRGTMG 662
             +      I+H D+   NVL+            I DF  S  + ++  R          
Sbjct: 118 KFYHRG---IVHGDLSQYNVLVS------EEGIWIIDFPQSVEVGEEGWREILERDVR-- 166

Query: 663 YVAPEWLRNVPVTTKVDVFSFGVMLLE 689
                +       T+ D+ S    +L+
Sbjct: 167 -NIITYFSR-TYRTEKDINSAIDRILQ 191

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 73.8 bits (181), Expect = 2e-16
 Identities = 22/140 (15%), Positives = 38/140 (27%), Gaps = 35/140 (25%)

Query: 65  IWFDKIPEKTLVWAADRDSPAEAGS-KITLTNDGKLLLTYFNGSV---QQIYSGAASLAL 120
           I +                  +    ++++  D  L+L   +  V        G    A+
Sbjct: 12  ILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDRDDRVWSTNTAGKGTGCRAV 71

Query: 121 MQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQ 180
           +Q +G   +    +  VW S +                            S G Y   +Q
Sbjct: 72  LQPNGRMDVLTNQNIAVWTSGN--------------------------SRSAGRYVFVLQ 105

Query: 181 ADGNLVLSAYHFADPGYWYT 200
            D NL +  Y       W T
Sbjct: 106 PDRNLAI--Y---GGALWTT 120

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 56.5 bits (136), Expect = 2e-10
 Identities = 17/130 (13%), Positives = 38/130 (29%), Gaps = 20/130 (15%)

Query: 125 GNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGN 184
           G+ V+ N  +++++ +           Q L   + L              Y L M+ D N
Sbjct: 1   GSVVVANNGNSILYSTQGNDN----HPQTLHATQSL----------QLSPYRLSMETDCN 46

Query: 185 LVLSAYHFADPGYWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYH 244
           LVL  +   D  +             +   +  M ++ +    ++              +
Sbjct: 47  LVL--FDRDDRVWSTNTAGKGTGCRAVLQPNGRMDVLTNQNIAVWTSG----NSRSAGRY 100

Query: 245 RATIDGHGNF 254
              +    N 
Sbjct: 101 VFVLQPDRNL 110

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 72.7 bits (178), Expect = 5e-16
 Identities = 30/141 (21%), Positives = 46/141 (32%), Gaps = 34/141 (24%)

Query: 65  IWFDKIPEKTLVWAADRDSPAEAGS-KITLTNDGKLLLTYFNGSV--QQIYSGAASLALM 121
           I F    E +           E  S + T+ +D  L+L   +  V            A++
Sbjct: 3   ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFDSDVRVWASNTAGATGCRAVL 62

Query: 122 QNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQA 181
           Q+DG  V+  A + + W S                              S GNY L +Q 
Sbjct: 63  QSDGLLVILTAQNTIRWSSG--------------------------TKGSIGNYVLVLQP 96

Query: 182 DGNLVLSAYHFADPGYWYTGT 202
           D  + +       PG W +GT
Sbjct: 97  DRTVTIY-----GPGLWDSGT 112

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 58.4 bits (141), Expect = 3e-11
 Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 12/111 (10%)

Query: 38  SNTSWLSPSGDFAFGFYSL-FGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTND 96
           +N   L          Y         L ++       T VWA++     + G K  L +D
Sbjct: 5   TNGEGLYAGQSLDVEPYHFIMQEDCNLVLY----DHSTSVWASNTGILGKKGCKAVLQSD 60

Query: 97  GKLLLTYFNG----SVQQIYSGAASLALMQNDGNFVLKNANSAVVWDSFDF 143
           G  ++    G    +   +      + ++Q DGN V+  ++   +W +  +
Sbjct: 61  GNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGSD---IWSTGTY 108

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 43.0 bits (101), Expect = 1e-05
 Identities = 18/111 (16%), Positives = 35/111 (31%), Gaps = 19/111 (17%)

Query: 146 DTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTL 205
           + +  G+ L  G+ L              Y   MQ D NLVL  +       W + T  L
Sbjct: 2   NLLTNGEGLYAGQSL----------DVEPYHFIMQEDCNLVLYDH---STSVWASNTGIL 48

Query: 206 NNV--SLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNF 254
                  +        + ++ G +++       +   +  +   +   GN 
Sbjct: 49  GKKGCKAVLQSDGNFVVYDAEGRSLWA----SHSVRGNGNYVLVLQEDGNV 95

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 58.5 bits (141), Expect = 5e-11
 Identities = 24/122 (19%), Positives = 45/122 (36%), Gaps = 16/122 (13%)

Query: 89  SKITLTNDGKLLLTYFNGSVQQIYSGAASLALMQNDGNFVLKNANSAVVW-DSFDFPTDT 147
           SK    N  ++L  +   S++ ++       +MQ D N VL + N+ +   ++       
Sbjct: 6   SKQPDDNHPQIL--HATESLEILFGTHVYRFIMQTDCNLVLYDNNNPIWATNTGGLGNGC 63

Query: 148 ILPGQVLLTGKKLYSNSRGTADYSTG------NYTLEMQADGNLVLSAYHFADPGYWYTG 201
               Q    G  +   +     + +       +Y L +Q D N+V+          W T 
Sbjct: 64  RAVLQP--DGVLVVITNENVTVWQSPVAGKAGHYVLVLQPDRNVVIY-----GDALWATQ 116

Query: 202 TV 203
           TV
Sbjct: 117 TV 118

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 55.4 bits (133), Expect = 6e-10
 Identities = 16/118 (13%), Positives = 32/118 (27%), Gaps = 18/118 (15%)

Query: 137 VWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPG 196
                D                 L++       + T  Y   MQ D NLVL  Y   +P 
Sbjct: 6   SKQPDDNHPQI------------LHATESLEILFGTHVYRFIMQTDCNLVL--YDNNNPI 51

Query: 197 YWYTGTVTLNNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNF 254
           +        N    +      + +I +    +++         +  ++   +    N 
Sbjct: 52  WATNTGGLGNGCRAVLQPDGVLVVITNENVTVWQSP----VAGKAGHYVLVLQPDRNV 105

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

 Score = 53.6 bits (128), Expect = 2e-09
 Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 21/124 (16%)

Query: 145 TDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVT 204
           +D +  G  L TG  L            G Y   +Q D NLVL   + A    W +GT  
Sbjct: 1   SDRLNSGHQLDTGGSLAE----------GGYLFIIQNDCNLVLYDNNRA---VWASGTNG 47

Query: 205 LNNVS-LIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQQFAYHKST 263
             +   L       + + + +            T  ++  +   +    N     Y  S 
Sbjct: 48  KASGCVLKMQNDGNLVIYSGSRAIWAS-----NTNRQNGNYYLILQRDRNVVI--YDNSN 100

Query: 264 SSRW 267
           ++ W
Sbjct: 101 NAIW 104

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

 Score = 47.9 bits (113), Expect = 2e-07
 Identities = 19/122 (15%), Positives = 48/122 (39%), Gaps = 16/122 (13%)

Query: 28  ISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEA 87
           ++ G  +  G + +     G + F   +       L ++ +       VWA+  +  A +
Sbjct: 4   LNSGHQLDTGGSLA----EGGYLFIIQNDCN----LVLYDNNRA----VWASGTNGKA-S 50

Query: 88  GSKITLTNDGKLLLTYFNGSV---QQIYSGAASLALMQNDGNFVLKNANSAVVWDSFDFP 144
           G  + + NDG L++   + ++              ++Q D N V+ + ++  +W +    
Sbjct: 51  GCVLKMQNDGNLVIYSGSRAIWASNTNRQNGNYYLILQRDRNVVIYDNSNNAIWATHTNV 110

Query: 145 TD 146
            +
Sbjct: 111 GN 112

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

 Score = 50.8 bits (121), Expect = 2e-08
 Identities = 20/109 (18%), Positives = 37/109 (33%), Gaps = 16/109 (14%)

Query: 146 DTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTL 205
           + +  G+ L TG+ L          + G++   MQ D NLVL  Y    P +        
Sbjct: 2   NILYSGETLSTGEFL----------NYGSFVFIMQEDCNLVL--YDVDKPIWATNTGGLS 49

Query: 206 NNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNF 254
            +  L       + + N +   I+       T  ++  +   +    N 
Sbjct: 50  RSCFLSMQTDGNLVVYNPSNKPIWA----SNTGGQNGNYVCILQKDRNV 94

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

 Score = 49.2 bits (117), Expect = 6e-08
 Identities = 22/103 (21%), Positives = 34/103 (33%), Gaps = 15/103 (14%)

Query: 109 QQIYSGAASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQ-------VLLTGKKLY 161
           + +  G+     MQ D N VL + +  + W +                   V+       
Sbjct: 14  EFLNYGSFVFI-MQEDCNLVLYDVDKPI-WATNTGGLSRSCFLSMQTDGNLVVYNPSNKP 71

Query: 162 SNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVT 204
             +  T     GNY   +Q D N+V+          W TGT T
Sbjct: 72  IWASNTG-GQNGNYVCILQKDRNVVIY-----GTDRWATGTHT 108

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

 Score = 36.5 bits (84), Expect = 0.002
 Identities = 15/109 (13%), Positives = 32/109 (29%), Gaps = 19/109 (17%)

Query: 42  WLSPSGDFAFGFYSLF----GGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDG 97
            LS      +G +         L L             +WA +    +     +++  DG
Sbjct: 9   TLSTGEFLNYGSFVFIMQEDCNLVLYD-------VDKPIWATNTGGLS-RSCFLSMQTDG 60

Query: 98  KLLL----TYFNGSVQQIYSGAASLALMQNDGNFVLKNANSAVVWDSFD 142
            L++         +          + ++Q D N V+   +    W +  
Sbjct: 61  NLVVYNPSNKPIWASNTGGQNGNYVCILQKDRNVVIYGTD---RWATGT 106

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	788
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.82
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	99.71
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	99.62
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.59
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	99.58
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	99.41
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.15
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	98.78
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	98.71
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	98.51
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	98.5
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	98.41
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	98.38
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.01
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.44
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	96.73
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	95.44
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	94.97
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	94.13
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	91.53
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	86.94
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	81.73
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	81.07

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.2e-49  Score=415.07  Aligned_cols=270  Identities=27%  Similarity=0.499  Sum_probs=206.7

Q ss_pred             cccCHHHHHHHhhcc-----------cccccccccceEEEEEEeccC-cceeeeeeecccc-hHHHHHHHHHHHHHhcCC
Q 047157          478 REFTFQELQEATKGF-----------SKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKD-IEKTNEEFMTELKIIGRT  544 (788)
Q Consensus       478 ~~~~~~~l~~~t~~~-----------~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l  544 (788)
                      ..++|+++.+++..|           .++||+|+||+||+|.++..+ ....||||.+... .....++|.+|+++|+++
T Consensus         5 d~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l   84 (299)
T d1jpaa_           5 DPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF   84 (299)
T ss_dssp             CGGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTC
T ss_pred             CCCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC
Confidence            345666666655444           468999999999999986332 3346899988653 345567899999999999


Q ss_pred             CccccceEeeEEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEe
Q 047157          545 HHKNLVRLLGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLL  624 (788)
Q Consensus       545 ~hpniv~~~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll  624 (788)
                      +|||||++++++.+++..++||||+++|+|.+++......+++.+++.++.||++||.|||++   +|+||||||+||||
T Consensus        85 ~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~NILl  161 (299)
T d1jpaa_          85 DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILV  161 (299)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred             CCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccceEEE
Confidence            999999999999999999999999999999999988777899999999999999999999999   99999999999999


Q ss_pred             ccCCCCCCCcEEEeecCCccccCCCCCcc----cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCc
Q 047157          625 DLKTLDTNYMAKISDFGISKLLNKDQTRT----DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIEL  699 (788)
Q Consensus       625 ~~~~~~~~~~~kL~Dfg~a~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~  699 (788)
                      +     .++.+||+|||+++.+.......    .....+|+.|+|||.+.+..++.++|||||||++|||+| |+.||..
T Consensus       162 ~-----~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~  236 (299)
T d1jpaa_         162 N-----SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD  236 (299)
T ss_dssp             C-----TTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             C-----CCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCC
Confidence            8     88899999999998765433221    122457899999999999999999999999999999998 8999975


Q ss_pred             cccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          700 SRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ....+.        .    ..+..+         .....+....+.+.+|+.+||+.||++||||+||++.|+++++
T Consensus       237 ~~~~~~--------~----~~i~~~---------~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         237 MTNQDV--------I----NAIEQD---------YRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             CCHHHH--------H----HHHHTT---------CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCHHHH--------H----HHHHcC---------CCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            432211        1    111111         1111122345678899999999999999999999999988754

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-49  Score=408.25  Aligned_cols=255  Identities=26%  Similarity=0.428  Sum_probs=198.5

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .+.+.++||+|+||+||+|.+.   ++..||||+++... ...++|.+|++++++++||||++++|++.+++..++||||
T Consensus         6 ~~~~~~~iG~G~fg~Vy~~~~~---~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~   81 (263)
T d1sm2a_           6 ELTFVQEIGSGQFGLVHLGYWL---NKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF   81 (263)
T ss_dssp             CEEEEEEEECCSSCCEEEEEET---TTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HcEEEEEEeeCCCeEEEEEEEC---CCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEe
Confidence            3567789999999999999874   45689999997643 3456899999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++|+|.+++......+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+++....
T Consensus        82 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~-----~~~~~Kl~DFGla~~~~~  153 (263)
T d1sm2a_          82 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVG-----ENQVIKVSDFGMTRFVLD  153 (263)
T ss_dssp             CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEEC-----GGGCEEECSCC-------
T ss_pred             cCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeec-----CCCCeEecccchheeccC
Confidence            999999999988778899999999999999999999999   999999999999999     788999999999987765


Q ss_pred             CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCC-CCCccccccccccchhhhHHHHHHHhhccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR-HIELSRVEEESEEVDIVLSDWVISCMLSRNLQ  727 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (788)
                      ..........||+.|+|||++.+..++.++|||||||++|||+|+.. |+......+        ...    ....+.. 
T Consensus       154 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~--------~~~----~i~~~~~-  220 (263)
T d1sm2a_         154 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--------VVE----DISTGFR-  220 (263)
T ss_dssp             -----------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHH--------HHH----HHHHTCC-
T ss_pred             CCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHH--------HHH----HHHhcCC-
Confidence            54444445678999999999999999999999999999999999654 444322111        111    1111100 


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          728 VLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       728 ~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                       .  ..+     ....+++.+++.+||+.||++||||+||+++|+++.+
T Consensus       221 -~--~~p-----~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         221 -L--YKP-----RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             -C--CCC-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -C--CCc-----cccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence             0  011     1223578899999999999999999999999998754

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.7e-49  Score=412.13  Aligned_cols=261  Identities=26%  Similarity=0.398  Sum_probs=214.9

Q ss_pred             HHHHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      +....+.+.++||+|+||+||+|.++  .++..||||+++... ...++|.+|++++++++|||||++++++.+++..++
T Consensus        14 i~~~~~~~~~~iG~G~fg~Vy~a~~~--~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i   90 (287)
T d1opja_          14 MERTDITMKHKLGGGQYGEVYEGVWK--KYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI   90 (287)
T ss_dssp             CCGGGEEEEEETTTTTTSSEEEEEEG--GGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             ecHHHeEEeeEEeeCCCeEEEEEEEC--CCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEE
Confidence            44456778899999999999999987  677899999997553 345689999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          565 VYELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      ||||+++|+|.+++... ...+++..+..++.||++||.|||++   +|+||||||+|||++     .++.+||+|||++
T Consensus        91 v~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~-----~~~~~Kl~DFG~a  162 (287)
T d1opja_          91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVG-----ENHLVKVADFGLS  162 (287)
T ss_dssp             EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC-----GGGCEEECCCCCT
T ss_pred             EeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEEC-----CCCcEEEccccce
Confidence            99999999999999754 45789999999999999999999999   999999999999998     7889999999999


Q ss_pred             cccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          644 KLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       644 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      +..............|++.|+|||++.+..++.++|||||||++|||++|..|+.......       .    .......
T Consensus       163 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~-------~----~~~~i~~  231 (287)
T d1opja_         163 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-------Q----VYELLEK  231 (287)
T ss_dssp             TTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-------H----HHHHHHT
T ss_pred             eecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHH-------H----HHHHHhc
Confidence            9876655555555668999999999999999999999999999999999877764332111       0    1111111


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      +         ..........+++.+|+.+||+.||++||||+||++.|+.+.+
T Consensus       232 ~---------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~  275 (287)
T d1opja_         232 D---------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  275 (287)
T ss_dssp             T---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred             C---------CCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            1         0111111234678899999999999999999999999987653

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-48  Score=396.85  Aligned_cols=245  Identities=25%  Similarity=0.365  Sum_probs=205.0

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||+||+|+.+  .++..||+|.+.+..   ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus         7 dy~i~~~iG~G~fg~Vy~~~~~--~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~iv   84 (263)
T d2j4za1           7 DFEIGRPLGKGKFGNVYLAREK--QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   84 (263)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HeEEEEEEecCCCcEEEEEEEC--CCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEE
Confidence            3778899999999999999986  677899999986432   23456789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++|+|.+++.+. ..+++..+..++.||++||+|||++   +|+||||||+|||++     .++.+||+|||++..
T Consensus        85 mEy~~~g~L~~~l~~~-~~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~-----~~~~~kl~DFG~a~~  155 (263)
T d2j4za1          85 LEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLG-----SAGELKIADFGWSVH  155 (263)
T ss_dssp             EECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC-----TTSCEEECCCCSCSC
T ss_pred             EeecCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---Ceeeeeeccccceec-----CCCCEeecccceeee
Confidence            9999999999999654 5689999999999999999999999   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      .....   .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.            ........
T Consensus       156 ~~~~~---~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~------------~~~i~~~~  220 (263)
T d2j4za1         156 APSSR---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------------YKRISRVE  220 (263)
T ss_dssp             CCCCC---CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH------------HHHHHTTC
T ss_pred             cCCCc---ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHH------------HHHHHcCC
Confidence            65432   2346799999999999999999999999999999999999999976432211            11111111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                              +..  +....+++.+++.+||+.||++|||++|+++
T Consensus       221 --------~~~--p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         221 --------FTF--PDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             --------CCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --------CCC--CccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence                    110  1112456788999999999999999999986

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-47  Score=400.67  Aligned_cols=249  Identities=24%  Similarity=0.333  Sum_probs=206.9

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .|.+.++||+|+||+||+|..+  .++..||||++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus        21 ~Y~~~~~iG~G~fg~Vy~a~~~--~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy   98 (293)
T d1yhwa1          21 KYTRFEKIGQGASGTVYTAMDV--ATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (293)
T ss_dssp             TBCSCEECCCSSSCEEEEEEBT--TTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccEEEEEEecCcCcEEEEEEEC--CCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEe
Confidence            3667789999999999999876  66789999999766555667899999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++|+|.+++.+  ..+++.++..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+++.+..
T Consensus        99 ~~gg~L~~~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~-----~~~~vkl~DFG~a~~~~~  168 (293)
T d1yhwa1          99 LAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLG-----MDGSVKLTDFGFCAQITP  168 (293)
T ss_dssp             CTTCBHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----TTCCEEECCCTTCEECCS
T ss_pred             cCCCcHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEEC-----CCCcEeeccchhheeecc
Confidence            999999998855  3689999999999999999999999   999999999999998     778999999999987754


Q ss_pred             CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      ... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+.           ........    
T Consensus       169 ~~~-~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-----------~~~~~~~~----  232 (293)
T d1yhwa1         169 EQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-----------LYLIATNG----  232 (293)
T ss_dssp             TTC-CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-----------HHHHHHHC----
T ss_pred             ccc-cccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHH-----------HHHHHhCC----
Confidence            332 23446799999999999999999999999999999999999999975432111           00001110    


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                          .+.........+.+.+++.+||+.||++|||++|+++
T Consensus       233 ----~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         233 ----TPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             ----SCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ----CCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                1111112223467888999999999999999999986

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-47  Score=395.19  Aligned_cols=252  Identities=26%  Similarity=0.422  Sum_probs=211.9

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecC
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELM  569 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~  569 (788)
                      +.+.++||+|+||+||+|+++   ++..||||.++... ...++|.+|++++++++||||+++++++.+++..++||||+
T Consensus         6 ~~~~~~iG~G~fg~Vy~~~~~---~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~   81 (258)
T d1k2pa_           6 LTFLKELGTGQFGVVKYGKWR---GQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM   81 (258)
T ss_dssp             CCCCCCCCEETTEEEEEEEET---TTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC
T ss_pred             CEEeEEEecCCCeEEEEEEEC---CCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEcc
Confidence            457789999999999999974   56689999997643 34568999999999999999999999999999999999999


Q ss_pred             CCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCC
Q 047157          570 PNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKD  649 (788)
Q Consensus       570 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~  649 (788)
                      ++|+|.+++......+++..+++++.||++||.|||++   +|+||||||+|||++     .++.+||+|||+++.....
T Consensus        82 ~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~-----~~~~~kl~DfG~a~~~~~~  153 (258)
T d1k2pa_          82 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVN-----DQGVVKVSDFGLSRYVLDD  153 (258)
T ss_dssp             TTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEEC-----TTCCEEECCCSSCCBCSSS
T ss_pred             CCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEc-----CCCcEEECcchhheeccCC
Confidence            99999999888778899999999999999999999999   999999999999998     7889999999999877655


Q ss_pred             CCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          650 QTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       650 ~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      .........+|+.|+|||.+.+..++.++||||||+++|||+| |+.||......+.            ...+..+.   
T Consensus       154 ~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~------------~~~i~~~~---  218 (258)
T d1k2pa_         154 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET------------AEHIAQGL---  218 (258)
T ss_dssp             SCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH------------HHHHHTTC---
T ss_pred             CceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHH------------HHHHHhCC---
Confidence            5444555678999999999999999999999999999999998 8999976532221            11111111   


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                            ....+....+++.+++.+||+.||++|||++||+++|..+
T Consensus       219 ------~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         219 ------RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             ------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             ------CCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence                  0011112335788999999999999999999999999653

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.7e-48  Score=397.84  Aligned_cols=251  Identities=25%  Similarity=0.302  Sum_probs=201.3

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .|.+.++||+|+||+||+|+++  .+++.||||++.... ....+.+.+|++++++++||||+++++++.+++..+||||
T Consensus         6 dy~~~~~lG~G~fg~V~~~~~~--~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE   83 (271)
T d1nvra_           6 DWDLVQTLGEGAYGEVQLAVNR--VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   83 (271)
T ss_dssp             EEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ceEEEEEEecCcCeEEEEEEEC--CCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence            3677899999999999999987  667899999986543 3345678999999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++|+|.+++.. ...+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+|+...
T Consensus        84 y~~gg~L~~~l~~-~~~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~-----~~~~~KL~DFG~a~~~~  154 (271)
T d1nvra_          84 YCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLD-----ERDNLKISDFGLATVFR  154 (271)
T ss_dssp             CCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC-----TTCCEEECCCTTCEECE
T ss_pred             ccCCCcHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEEC-----CCCCEEEccchhheeec
Confidence            9999999999954 35789999999999999999999999   999999999999998     77899999999999765


Q ss_pred             CCCC-cccccccCCccccCcccccCCCC-CccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          648 KDQT-RTDTNMRGTMGYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       648 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~-s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      .... .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||........      ....     .... 
T Consensus       155 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~------~~~~-----~~~~-  222 (271)
T d1nvra_         155 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ------EYSD-----WKEK-  222 (271)
T ss_dssp             ETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSH------HHHH-----HHTT-
T ss_pred             cCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHH------HHHH-----HhcC-
Confidence            4332 23345689999999999988876 5789999999999999999999975432111      0000     0000 


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                             ...........+++.+|+.+||+.||++|||++|+++
T Consensus       223 -------~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         223 -------KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             -------CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -------CCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                   0001111122456778999999999999999999975

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-48  Score=402.81  Aligned_cols=255  Identities=25%  Similarity=0.421  Sum_probs=205.8

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ...+.+.+.||+|+||+||+|.++   ++..||||+++... ...+.|.+|++++++++|||||++++++.+ +..++||
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~---~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~   86 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYN---GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT   86 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET---TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             HHHeEEeEEEecCCCcEEEEEEEC---CCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEE
Confidence            345677899999999999999974   55689999997543 345689999999999999999999998855 5679999


Q ss_pred             ecCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          567 ELMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       567 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      ||+++|+|.+++... ...+++..++.|+.||++||.|||++   +|+||||||+||||+     .++.+||+|||+++.
T Consensus        87 Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~-----~~~~~Kl~DFGla~~  158 (272)
T d1qpca_          87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVS-----DTLSCKIADFGLARL  158 (272)
T ss_dssp             ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----TTSCEEECCCTTCEE
T ss_pred             EeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeee-----cccceeeccccceEE
Confidence            999999999988544 34689999999999999999999999   999999999999998     888999999999998


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      +............||+.|+|||++.+..++.++|||||||++|||+||..|+.......       .    .......+.
T Consensus       159 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~-------~----~~~~i~~~~  227 (272)
T d1qpca_         159 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-------E----VIQNLERGY  227 (272)
T ss_dssp             CSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------H----HHHHHHTTC
T ss_pred             ccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHH-------H----HHHHHHhcC
Confidence            76655545555678999999999999999999999999999999999766654321110       0    111111110


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                               ....+....+++.+|+.+||+.||++||||+||+++|+..
T Consensus       228 ---------~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~  267 (272)
T d1qpca_         228 ---------RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF  267 (272)
T ss_dssp             ---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---------CCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhh
Confidence                     0011112345688999999999999999999999999753

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-47  Score=400.85  Aligned_cols=255  Identities=27%  Similarity=0.408  Sum_probs=206.4

Q ss_pred             hcccc-cccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          490 KGFSK-LVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       490 ~~~~~-~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      +.+.+ +||+|+||+||+|.++..+++..||||.++... ....++|.+|+++|++++|||||++++++.+ +..+||||
T Consensus        10 ~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE   88 (285)
T d1u59a_          10 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVME   88 (285)
T ss_dssp             EEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEE
T ss_pred             eEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEE
Confidence            33445 499999999999988766667789999986543 4456789999999999999999999999865 46899999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++|+|.+++......+++..+..++.||++||.|||++   +|+||||||+|||++     .++.+||+|||+++.+.
T Consensus        89 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~-----~~~~~Kl~DFGla~~~~  160 (285)
T d1u59a_          89 MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLV-----NRHYAKISDFGLSKALG  160 (285)
T ss_dssp             CCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEE-----ETTEEEECCCTTCEECT
T ss_pred             eCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeec-----cCCceeeccchhhhccc
Confidence            9999999999877777899999999999999999999999   999999999999998     78899999999999775


Q ss_pred             CCCCc--ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          648 KDQTR--TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       648 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .....  ......||+.|+|||++.+..++.++|||||||++|||+| |+.||......+.            ...+..+
T Consensus       161 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~------------~~~i~~~  228 (285)
T d1u59a_         161 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV------------MAFIEQG  228 (285)
T ss_dssp             TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH------------HHHHHTT
T ss_pred             ccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHH------------HHHHHcC
Confidence            54332  2234568999999999999999999999999999999998 8999975432111            1111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      ..       +.  .+...++++.+|+.+||+.||++|||+.+|++.|+..
T Consensus       229 ~~-------~~--~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~  269 (285)
T d1u59a_         229 KR-------ME--CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  269 (285)
T ss_dssp             CC-------CC--CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CC-------CC--CCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            11       11  1112346788999999999999999999999988753

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-48  Score=403.66  Aligned_cols=251  Identities=22%  Similarity=0.300  Sum_probs=207.7

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .|.+.+.||+|+||+||+|.++  .++..||||+++.......+.+.+|++++++++|||||++++++.+++..++||||
T Consensus        13 ~Y~i~~~iG~G~fg~Vy~~~~~--~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy   90 (288)
T d2jfla1          13 FWEIIGELGDGAFGKVYKAQNK--ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   90 (288)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             CeEEeEEEeeCCCcEEEEEEEC--CCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEec
Confidence            3667889999999999999887  67789999999876666677899999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++|+|.+++.+....+++.++..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++.....
T Consensus        91 ~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~-----~~~~~Kl~DFG~a~~~~~  162 (288)
T d2jfla1          91 CAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFT-----LDGDIKLADFGVSAKNTR  162 (288)
T ss_dssp             CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----TTSCEEECCCTTCEECHH
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeEC-----CCCCEEEEechhhhccCC
Confidence            999999999877777899999999999999999999999   999999999999998     788999999999976532


Q ss_pred             CCCcccccccCCccccCccccc-----CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLR-----NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      .. .......||+.|+|||++.     ...++.++|||||||++|||++|+.||......+..            .....
T Consensus       163 ~~-~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~------------~~i~~  229 (288)
T d2jfla1         163 TI-QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVL------------LKIAK  229 (288)
T ss_dssp             HH-HHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH------------HHHHH
T ss_pred             Cc-ccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHH------------HHHHc
Confidence            21 1223467999999999983     556899999999999999999999999765322210            00111


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ..       .+.........+++.+|+.+||+.||++|||++|+++
T Consensus       230 ~~-------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         230 SE-------PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             SC-------CCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CC-------CCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            11       1111112234567889999999999999999999986

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-47  Score=397.75  Aligned_cols=259  Identities=24%  Similarity=0.391  Sum_probs=201.6

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ..+.+.++||+|+||+||+|+++    + .||||+++..  .....+.|.+|++++++++|||||++++++.+ +..++|
T Consensus         8 ~~~~~~~~lG~G~fg~Vy~~~~~----~-~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv   81 (276)
T d1uwha_           8 GQITVGQRIGSGSFGTVYKGKWH----G-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIV   81 (276)
T ss_dssp             TCCCCCSEEEECSSCEEEEEESS----S-EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred             ccEEEEEEEeeCCCcEEEEEEEC----C-EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEE
Confidence            34567789999999999999753    2 5999988643  34556789999999999999999999998754 568999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++|+|.+++...+..+++..+..++.||++||+|||++   +|+||||||+|||++     .++.+||+|||+++.
T Consensus        82 ~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~-----~~~~~Kl~DFGla~~  153 (276)
T d1uwha_          82 TQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLH-----EDLTVKIGDFGLATV  153 (276)
T ss_dssp             EECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE-----TTSSEEECCCCCSCC
T ss_pred             EecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEc-----CCCCEEEccccceee
Confidence            999999999999987777899999999999999999999999   999999999999998     888999999999987


Q ss_pred             cCCCCC-cccccccCCccccCcccccC---CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          646 LNKDQT-RTDTNMRGTMGYVAPEWLRN---VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       646 ~~~~~~-~~~~~~~gt~~y~aPE~~~~---~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      ...... .......||+.|+|||++.+   ..++.++|||||||++|||+||+.||........       .........
T Consensus       154 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~-------~~~~~~~~~  226 (276)
T d1uwha_         154 KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-------IIFMVGRGY  226 (276)
T ss_dssp             ------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-------HHHHHHHTS
T ss_pred             ccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHH-------HHHHHhcCC
Confidence            654332 23345679999999999864   3589999999999999999999999975422111       111111111


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      .......         .....++.+.+|+.+||+.||++|||++||+++|+.+.+
T Consensus       227 ~~p~~~~---------~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         227 LSPDLSK---------VRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR  272 (276)
T ss_dssp             CCCCGGG---------SCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCcchh---------ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            1111111         111234678889999999999999999999999987653

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-47  Score=401.49  Aligned_cols=261  Identities=25%  Similarity=0.462  Sum_probs=203.3

Q ss_pred             hhcccccccccccceEEEEEEeccC--cceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKD--TQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~--~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .+.+.++||+|+||+||+|.++...  ....||||++.... ....++|.+|++++++++|||||+++|++.+.+..++|
T Consensus         8 ~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v   87 (283)
T d1mqba_           8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII   87 (283)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             HeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEE
Confidence            4556789999999999999987432  23579999986433 44556899999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+.+++|.+++......+++.++..++.||+.||.|||++   +|+||||||+||||+     .++.+||+|||+++.
T Consensus        88 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~-----~~~~~Kl~DFGla~~  159 (283)
T d1mqba_          88 TEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVN-----SNLVCKVSDFGLSRV  159 (283)
T ss_dssp             EECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC-----TTCCEEECCCCC---
T ss_pred             EEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEEC-----CCCeEEEcccchhhc
Confidence            999999999999988878899999999999999999999999   999999999999998     888999999999987


Q ss_pred             cCCCCCc--ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          646 LNKDQTR--TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       646 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      +......  ......||+.|+|||++.+..++.++|||||||++|||++|..|+.......       .    +...+..
T Consensus       160 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~-------~----~~~~i~~  228 (283)
T d1mqba_         160 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-------E----VMKAIND  228 (283)
T ss_dssp             --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-------H----HHHHHHT
T ss_pred             ccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHH-------H----HHHHHhc
Confidence            6543322  2233568999999999999999999999999999999999776654321110       0    1111111


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCC
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEV  777 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~  777 (788)
                      +.         ....+...+.++.+|+.+||+.||++||||.||+++|+++.+.
T Consensus       229 ~~---------~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~  273 (283)
T d1mqba_         229 GF---------RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  273 (283)
T ss_dssp             TC---------CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             cC---------CCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence            11         1111122346788999999999999999999999999887653

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-47  Score=396.27  Aligned_cols=249  Identities=28%  Similarity=0.419  Sum_probs=201.2

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEecCCC
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYELMPN  571 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~~~~  571 (788)
                      ++||+|+||+||+|.++....++.||||+++...  ....++|.+|++++++++|||||+++++|.+ +..+|||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            5799999999999998766677899999986432  3445789999999999999999999999965 457899999999


Q ss_pred             CCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCCCCC
Q 047157          572 GTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNKDQT  651 (788)
Q Consensus       572 gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~  651 (788)
                      |+|.+++.+. ..+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+++.+.....
T Consensus        92 g~L~~~l~~~-~~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~-----~~~~~kl~DFGla~~~~~~~~  162 (277)
T d1xbba_          92 GPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLV-----TQHYAKISDFGLSKALRADEN  162 (277)
T ss_dssp             EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE-----ETTEEEECCCTTCEECCTTCS
T ss_pred             CcHHHHHhhc-cCCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhccc-----ccCcccccchhhhhhcccccc
Confidence            9999998654 5689999999999999999999999   999999999999998     788999999999987654433


Q ss_pred             cc--cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          652 RT--DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       652 ~~--~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      ..  .....||+.|+|||.+.+..++.++|||||||++|||++ |+.||......+            +...+..+..  
T Consensus       163 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~------------~~~~i~~~~~--  228 (277)
T d1xbba_         163 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------------VTAMLEKGER--  228 (277)
T ss_dssp             EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------------HHHHHHTTCC--
T ss_pred             ccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHH------------HHHHHHcCCC--
Confidence            22  234568999999999999999999999999999999998 899997543211            1111111111  


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhc
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEG  773 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~  773 (788)
                           +.  .+...++++.+|+.+||+.||++|||+++|+++|+.
T Consensus       229 -----~~--~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~  266 (277)
T d1xbba_         229 -----MG--CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  266 (277)
T ss_dssp             -----CC--CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             -----CC--CCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhC
Confidence                 11  111234678899999999999999999999998865

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.8e-47  Score=390.67  Aligned_cols=247  Identities=24%  Similarity=0.340  Sum_probs=197.0

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEec----CCeEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE----EDKRL  563 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----~~~~~  563 (788)
                      +++.++||+|+||+||+|.+.  .++..||+|.+...  .....+.+.+|++++++++|||||++++++.+    ....+
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~--~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~   88 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDT--ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV   88 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEEC--CCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEE
Confidence            356678999999999999886  67779999998654  24456789999999999999999999999865    34689


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCc--eEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQ--IIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~--ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      +||||+++|+|.+++.+. ..+++..+..++.||++||+|||++   +  |+||||||+|||++.    +++.+||+|||
T Consensus        89 ivmE~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~gl~yLH~~---~~~IiHrDiKp~NILl~~----~~~~~Kl~DFG  160 (270)
T d1t4ha_          89 LVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITG----PTGSVKIGDLG  160 (270)
T ss_dssp             EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESS----TTSCEEECCTT
T ss_pred             EEEeCCCCCcHHHHHhcc-ccccHHHHHHHHHHHHHHHHHHHHC---CCCEEeCCcChhhceeeC----CCCCEEEeecC
Confidence            999999999999999654 5689999999999999999999998   6  999999999999961    46789999999


Q ss_pred             CccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      +++......   .....||+.|+|||++.+ +++.++|||||||++|||++|+.||........           .....
T Consensus       161 la~~~~~~~---~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~-----------~~~~i  225 (270)
T d1t4ha_         161 LATLKRASF---AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-----------IYRRV  225 (270)
T ss_dssp             GGGGCCTTS---BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-----------HHHHH
T ss_pred             cceeccCCc---cCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHH-----------HHHHH
Confidence            998654332   234679999999999876 699999999999999999999999964321110           11111


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ..+.....        .+....+++.+|+.+||+.||++|||++|+++
T Consensus       226 ~~~~~~~~--------~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         226 TSGVKPAS--------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             TTTCCCGG--------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HcCCCCcc--------cCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            11111110        11112345788999999999999999999986

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-47  Score=393.40  Aligned_cols=252  Identities=20%  Similarity=0.303  Sum_probs=193.4

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEec--CCeEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE--EDKRLL  564 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~l  564 (788)
                      .|.+.+.||+|+||+||+|+.+  .+++.||||.+...  .....+.+.+|++++++++||||+++++++.+  .+..++
T Consensus         5 dy~~~~~iG~G~fg~Vy~~~~~--~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i   82 (269)
T d2java1           5 DYEVLYTIGTGSYGRCQKIRRK--SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   82 (269)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred             hCEEeEEEecCCCeEEEEEEEC--CCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence            4677899999999999999886  66779999998644  24456789999999999999999999999865  456899


Q ss_pred             EEecCCCCCHhHhhhc---cCCCCCHHHHHHHHHHHHHHHHHhhhcc--CCceEecCCCCCcEEeccCCCCCCCcEEEee
Q 047157          565 VYELMPNGTLSNFLFH---EGQRPGWVQRVEIALGVARGLLYLHEEC--ETQIIHCDIKPQNVLLDLKTLDTNYMAKISD  639 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~--~~~ivH~dlkp~NIll~~~~~~~~~~~kL~D  639 (788)
                      ||||+++|+|.+++.+   ....+++..++.++.||+.||.|||++.  ..+|+||||||+|||++     .++.+||+|
T Consensus        83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~-----~~~~vkl~D  157 (269)
T d2java1          83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD-----GKQNVKLGD  157 (269)
T ss_dssp             EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEEC-----TTSCEEECC
T ss_pred             EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcC-----CCCcEEEee
Confidence            9999999999999864   3567899999999999999999999871  12499999999999998     788999999


Q ss_pred             cCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHH
Q 047157          640 FGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVIS  719 (788)
Q Consensus       640 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  719 (788)
                      ||+++.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+            ...
T Consensus       158 FG~a~~~~~~~~~-~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~------------~~~  224 (269)
T d2java1         158 FGLARILNHDTSF-AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE------------LAG  224 (269)
T ss_dssp             HHHHHHC------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------------HHH
T ss_pred             ccceeecccCCCc-cccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHH------------HHH
Confidence            9999887543322 234679999999999999999999999999999999999999997543221            111


Q ss_pred             HhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          720 CMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       720 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .+..+....+         +....+++.+|+.+||+.||++|||++|+++
T Consensus       225 ~i~~~~~~~~---------~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         225 KIREGKFRRI---------PYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HHHHTCCCCC---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHcCCCCCC---------CcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            1222222111         1123457888999999999999999999975

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-47  Score=406.65  Aligned_cols=269  Identities=23%  Similarity=0.328  Sum_probs=205.2

Q ss_pred             HHhhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      ...|.+.++||+|+||+||+|...  .++..||+|+++... ....+.+.+|+.+|++++|||||+++++|.+.+..++|
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~--~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iV   82 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHK--PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC   82 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEET--TTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEEC--CCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            445777899999999999999886  678899999986542 34457899999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhh-ccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHE-ECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      |||+++|+|.+++.+. ..+++..+..++.||+.||.|||+ +   +|+||||||+|||++     .++.+||+|||+|+
T Consensus        83 mEy~~gg~L~~~l~~~-~~l~~~~~~~~~~qil~aL~yLH~~~---~IiHRDiKP~NILl~-----~~~~vkl~DFGla~  153 (322)
T d1s9ja_          83 MEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVN-----SRGEIKLCDFGVSG  153 (322)
T ss_dssp             EECCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEEC-----TTCCEEECCCCCCH
T ss_pred             EEcCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHhC---CEEccccCHHHeeEC-----CCCCEEEeeCCCcc
Confidence            9999999999999765 468999999999999999999997 5   799999999999998     78899999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh-hHHHH------
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV-LSDWV------  717 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~-~~~~~------  717 (788)
                      ......   .....||+.|+|||++.+.+++.++||||+||++|||++|+.||......+........ .....      
T Consensus       154 ~~~~~~---~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (322)
T d1s9ja_         154 QLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRP  230 (322)
T ss_dssp             HHHHHT---C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------------
T ss_pred             ccCCCc---cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccc
Confidence            654322   23468999999999999999999999999999999999999999765432211000000 00000      


Q ss_pred             -------HHHhh----cc----cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          718 -------ISCML----SR----NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       718 -------~~~~~----~~----~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                             .....    ..    .........+..........++.+++.+||+.||++|||++|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~  297 (322)
T d1s9ja_         231 RTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  297 (322)
T ss_dssp             ---------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence                   00000    00    000000001111111122456888999999999999999999987

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-47  Score=397.18  Aligned_cols=264  Identities=25%  Similarity=0.383  Sum_probs=205.2

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      ..+.+.+.||+|+||+||+|.++   ++..||||++.... ...+.|.+|+.++++++|||||++++++.+ +..++|||
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~---~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~E   91 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWN---GTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE   91 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET---TTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred             HHEEEeeEEeeCCCeEEEEEEEC---CCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEE
Confidence            45788899999999999999885   34579999997543 345789999999999999999999999854 56899999


Q ss_pred             cCCCCCHhHhhhcc-CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          568 LMPNGTLSNFLFHE-GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       568 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      |+++|+|..++... ...+++.+++.++.||+.||+|||++   +|+||||||+||||+     .++.+||+|||+++..
T Consensus        92 y~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~-----~~~~~kl~DfGla~~~  163 (285)
T d1fmka3          92 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVG-----ENLVCKVADFGLARLI  163 (285)
T ss_dssp             CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC-----GGGCEEECCCCTTC--
T ss_pred             ecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEEC-----CCCcEEEcccchhhhc
Confidence            99999999998654 35689999999999999999999999   999999999999998     7889999999999877


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      ............||+.|+|||++....++.++||||||+++|||++|..|+.......       ...    ..+..+. 
T Consensus       164 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~-------~~~----~~i~~~~-  231 (285)
T d1fmka3         164 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-------EVL----DQVERGY-  231 (285)
T ss_dssp             ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-------HHH----HHHHTTC-
T ss_pred             cCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHH-------HHH----HHHHhcC-
Confidence            5554444455678999999999999999999999999999999999877665432111       011    1111111 


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcCCCCCCCCC
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLEVGMPPLLH  784 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~~~~pp~p~  784 (788)
                            .+  .......+++.+++.+||+.||++||||++|+++|+.......|+.+|
T Consensus       232 ------~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p~~~p  281 (285)
T d1fmka3         232 ------RM--PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP  281 (285)
T ss_dssp             ------CC--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCCCC
T ss_pred             ------CC--CCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCCCCCC
Confidence                  00  111123457889999999999999999999999999877655565444

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-47  Score=396.75  Aligned_cols=247  Identities=22%  Similarity=0.296  Sum_probs=201.9

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||+||+|..+  .+++.||||.+.+..   ....+.+.+|++++++++||||+++++++.+++..|+|
T Consensus         9 dy~i~~~lG~G~fg~Vy~a~~~--~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv   86 (288)
T d1uu3a_           9 DFKFGKILGEGSFSTVVLAREL--ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG   86 (288)
T ss_dssp             GEEEEEEEEECSSCEEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEE
T ss_pred             CCEEEEEEeeCCCeEEEEEEEC--CCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEE
Confidence            4778899999999999999886  667799999987532   23456799999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++|+|.+++... ..+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||+++.
T Consensus        87 mEy~~gg~L~~~~~~~-~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~-----~~~~vkl~DFG~a~~  157 (288)
T d1uu3a_          87 LSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLN-----EDMHIQITDFGTAKV  157 (288)
T ss_dssp             ECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----TTSCEEECCCTTCEE
T ss_pred             EEccCCCCHHHhhhcc-CCCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccC-----CCceEEeccccccee
Confidence            9999999999998655 5689999999999999999999999   999999999999998     788999999999997


Q ss_pred             cCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          646 LNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       646 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      +...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+.            .......
T Consensus       158 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~------------~~~i~~~  225 (288)
T d1uu3a_         158 LSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI------------FQKIIKL  225 (288)
T ss_dssp             CC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHHTT
T ss_pred             cccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHH------------HHHHHcC
Confidence            7544322 23346799999999999999999999999999999999999999976432211            1111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVI  768 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl  768 (788)
                      ..        ..  +....+++.+|+.+||+.||++|||++|++
T Consensus       226 ~~--------~~--p~~~s~~~~~li~~~L~~dP~~R~t~~e~~  259 (288)
T d1uu3a_         226 EY--------DF--PEKFFPKARDLVEKLLVLDATKRLGCEEME  259 (288)
T ss_dssp             CC--------CC--CTTCCHHHHHHHHTTSCSSGGGSTTSGGGT
T ss_pred             CC--------CC--CccCCHHHHHHHHHHccCCHhHCcCHHHHc
Confidence            11        11  112245678899999999999999999864

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=3.1e-46  Score=400.86  Aligned_cols=254  Identities=24%  Similarity=0.296  Sum_probs=211.5

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .|.+.++||+|+||+||+|+.+  .++..||||++........+.+.+|++++++++|||||++++++.+++..+|||||
T Consensus        27 ~Y~i~~~lG~G~fg~Vy~~~~~--~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          27 HYDIHEELGTGAFGVVHRVTER--ATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET--TTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             CeEEEEEEecCcCeEEEEEEEC--CCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            5788899999999999999886  67889999999876666678899999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++|+|.+++.+....+++..+..++.||+.||.|||++   +|+||||||+|||++.+   .++.+||+|||+++.+..
T Consensus       105 ~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~---~~~~vkL~DFG~a~~~~~  178 (350)
T d1koaa2         105 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTK---RSNELKLIDFGLTAHLDP  178 (350)
T ss_dssp             CCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESST---TSCCEEECCCTTCEECCT
T ss_pred             CCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccC---CCCeEEEeecchheeccc
Confidence            999999999977767899999999999999999999999   99999999999999632   457899999999987654


Q ss_pred             CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      ...  .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+..            ........  
T Consensus       179 ~~~--~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~------------~~i~~~~~--  242 (350)
T d1koaa2         179 KQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL------------RNVKSCDW--  242 (350)
T ss_dssp             TSC--EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------------HHHHHTCC--
T ss_pred             ccc--cceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHH------------HHHHhCCC--
Confidence            332  23467899999999999999999999999999999999999999765322111            11111110  


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                          ...........+.+.+|+.+||+.||++|||++|++++
T Consensus       243 ----~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         243 ----NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             ----CSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             ----CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                00111111234567889999999999999999999985

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=4.3e-46  Score=400.08  Aligned_cols=257  Identities=21%  Similarity=0.269  Sum_probs=212.7

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .|.+.+.||+|+||+||+|...  .++..||||++........+.+.+|++++++++|||||++++++.+++..+|||||
T Consensus        30 ~Y~i~~~lG~G~fg~V~~a~~~--~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          30 YYDILEELGSGAFGVVHRCVEK--ATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ceEEEEEEecCCCeEEEEEEEC--CCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            4778899999999999999886  66789999999876666677889999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++|+|.+++...+..+++.++..|+.||+.||.|||++   +|+||||||+|||++..   .++.+||+|||++..+..
T Consensus       108 ~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~---~~~~vkL~DFGla~~~~~  181 (352)
T d1koba_         108 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETK---KASSVKIIDFGLATKLNP  181 (352)
T ss_dssp             CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESST---TCCCEEECCCTTCEECCT
T ss_pred             CCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---Ceeeccccccccccccc---CCCeEEEeecccceecCC
Confidence            999999999877777899999999999999999999999   99999999999999732   457899999999998765


Q ss_pred             CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      ...  .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+.            ...+...... 
T Consensus       182 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~------------~~~i~~~~~~-  246 (352)
T d1koba_         182 DEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET------------LQNVKRCDWE-  246 (352)
T ss_dssp             TSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH------------HHHHHHCCCC-
T ss_pred             CCc--eeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH------------HHHHHhCCCC-
Confidence            432  2345789999999999999999999999999999999999999976532211            0111111111 


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--hhc
Q 047157          729 LVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM--LEG  773 (788)
Q Consensus       729 l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~  773 (788)
                           ...........++.+|+.+||+.||++|||++|++++  +++
T Consensus       247 -----~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~  288 (352)
T d1koba_         247 -----FDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKG  288 (352)
T ss_dssp             -----CCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSS
T ss_pred             -----CCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence                 0001111234567889999999999999999999874  544

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-47  Score=403.22  Aligned_cols=258  Identities=27%  Similarity=0.399  Sum_probs=205.3

Q ss_pred             HHhhcccccccccccceEEEEEEecc---Ccceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecCCe
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLK---DTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDK  561 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~  561 (788)
                      ...+.+.++||+|+||+||+|++...   .....||+|.+.... ......+.+|+.++.++ +|||||++++++.+.+.
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~  115 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  115 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence            34577889999999999999998632   223579999886432 34456789999999988 89999999999999999


Q ss_pred             EEEEEecCCCCCHhHhhhccC----------------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCC
Q 047157          562 RLLVYELMPNGTLSNFLFHEG----------------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKP  619 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~----------------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp  619 (788)
                      .++||||+++|+|.++|....                      ..+++..++.++.||++||+|||++   +|+||||||
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDlKp  192 (325)
T d1rjba_         116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAA  192 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSG
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCch
Confidence            999999999999999996543                      2478899999999999999999999   999999999


Q ss_pred             CcEEeccCCCCCCCcEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCC
Q 047157          620 QNVLLDLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHI  697 (788)
Q Consensus       620 ~NIll~~~~~~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~  697 (788)
                      +|||++     .++.+||+|||+|+........ ......||+.|+|||++.+..++.++|||||||++|||+| |+.||
T Consensus       193 ~Nill~-----~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf  267 (325)
T d1rjba_         193 RNVLVT-----HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY  267 (325)
T ss_dssp             GGEEEE-----TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred             hccccc-----cCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCC
Confidence            999998     8889999999999876544332 2334568999999999999999999999999999999997 89999


Q ss_pred             CccccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhh
Q 047157          698 ELSRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLE  772 (788)
Q Consensus       698 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~  772 (788)
                      ........       +..    ....+         .....+....+++.+|+.+||+.||++|||++||+++|.
T Consensus       268 ~~~~~~~~-------~~~----~~~~~---------~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         268 PGIPVDAN-------FYK----LIQNG---------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             TTCCCSHH-------HHH----HHHTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             CCCCHHHH-------HHH----HHhcC---------CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            75432211       111    11111         011111123467889999999999999999999999995

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.9e-46  Score=394.28  Aligned_cols=255  Identities=23%  Similarity=0.304  Sum_probs=191.8

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      ..|.+.++||+|+||+||+|..+  .+++.||||.+.... ....+.+.+|++++++++||||+++++++.+++..||||
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~--~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvm   86 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDK--RTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIM   86 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEET--TTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEeeccCeEEEEEEEC--CCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            34778899999999999999886  667799999987543 334467889999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+++|+|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||+....  +++.+||+|||+++..
T Consensus        87 E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~--~~~~vkl~DFG~a~~~  160 (307)
T d1a06a_          87 QLVSGGELFDRIVEK-GFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLD--EDSKIMISDFGLSKME  160 (307)
T ss_dssp             CCCCSCBHHHHHHTC-SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSS--TTCCEEECCC------
T ss_pred             eccCCCcHHHhhhcc-cCCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccC--CCceEEEeccceeEEc
Confidence            999999999999654 5789999999999999999999999   999999999999996432  5789999999999866


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      .....  .....||+.|+|||++.+..+++++|||||||++|||++|+.||......+.            .........
T Consensus       161 ~~~~~--~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~------------~~~i~~~~~  226 (307)
T d1a06a_         161 DPGSV--LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL------------FEQILKAEY  226 (307)
T ss_dssp             --------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH------------HHHHHTTCC
T ss_pred             cCCCe--eeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHH------------HHHHhccCC
Confidence            43322  2346799999999999999999999999999999999999999975432211            111111111


Q ss_pred             cccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          727 QVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       727 ~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                      .      ..........+.+.+++.+||+.||++|||++|++++
T Consensus       227 ~------~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         227 E------FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             C------CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             C------CCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            1      0001111234568889999999999999999999984

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-46  Score=391.20  Aligned_cols=259  Identities=22%  Similarity=0.348  Sum_probs=199.8

Q ss_pred             HHhhcccccccccccceEEEEEEecc-Ccceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ...|.+.+.||+|+||.||+|++... .....||||.++... ....+.+.+|++++++++||||+++++++. ++..++
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~i   84 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   84 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEE
Confidence            34577889999999999999988633 334679999986433 445678999999999999999999999985 467899


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++|+|.+++......+++..++.++.||++||.|||++   +|+||||||+||+++     .++.+||+|||+++
T Consensus        85 v~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~-----~~~~~Kl~DfG~a~  156 (273)
T d1mp8a_          85 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVS-----SNDCVKLGDFGLSR  156 (273)
T ss_dssp             EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEE-----ETTEEEECC-----
T ss_pred             EEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhccc---Ceeccccchhheeec-----CCCcEEEccchhhe
Confidence            9999999999999887777899999999999999999999999   999999999999998     78899999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ..............||+.|+|||.+.+..++.++|||||||++|||++ |..||......+..            .....
T Consensus       157 ~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~------------~~i~~  224 (273)
T d1mp8a_         157 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI------------GRIEN  224 (273)
T ss_dssp             --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH------------HHHHT
T ss_pred             eccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHH------------HHHHc
Confidence            776544444455678999999999999999999999999999999998 88898765332211            11111


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      +....         .+...++.+.+|+.+||+.||++|||++||++.|+.++
T Consensus       225 ~~~~~---------~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~  267 (273)
T d1mp8a_         225 GERLP---------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  267 (273)
T ss_dssp             TCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCC---------CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            11111         11123467889999999999999999999999998764

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.7e-46  Score=392.08  Aligned_cols=246  Identities=22%  Similarity=0.291  Sum_probs=201.3

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      ..|...+.||+|+||+||+|+..  .++..||||++....   ....+.+.+|++++++++|||||++++++.+++..++
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~--~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i   92 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDV--RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL   92 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEET--TTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEEC--CCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEE
Confidence            34677789999999999999886  678899999986432   3445679999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++|+|..++.. ...+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||++.
T Consensus        93 v~E~~~~g~l~~~~~~-~~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~-----~~~~~Kl~DFG~a~  163 (309)
T d1u5ra_          93 VMEYCLGSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLS-----EPGLVKLGDFGSAS  163 (309)
T ss_dssp             EEECCSEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEE-----TTTEEEECCCTTCB
T ss_pred             EEEecCCCchHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEC-----CCCCEEEeeccccc
Confidence            9999999999776644 46789999999999999999999999   999999999999998     88899999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccC---CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRN---VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      .....     ....||+.|+|||++.+   ..++.++|||||||++|||++|+.||......+.           . ...
T Consensus       164 ~~~~~-----~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~-----------~-~~i  226 (309)
T d1u5ra_         164 IMAPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-----------L-YHI  226 (309)
T ss_dssp             SSSSB-----CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-----------H-HHH
T ss_pred             ccCCC-----CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHH-----------H-HHH
Confidence            65432     23579999999999853   4689999999999999999999999975422111           0 011


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .......+        ......+.+.+|+.+||+.||++|||++|+++
T Consensus       227 ~~~~~~~~--------~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         227 AQNESPAL--------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             HHSCCCCC--------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HhCCCCCC--------CCCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            11111111        11123467888999999999999999999986

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-45  Score=388.15  Aligned_cols=258  Identities=28%  Similarity=0.447  Sum_probs=207.0

Q ss_pred             cccccccccccceEEEEEEeccC-cceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEec-CCeEEEEEe
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKD-TQIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE-EDKRLLVYE  567 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lV~e  567 (788)
                      +|.++||+|+||+||+|.+.... ....||||+++.. .....++|.+|++++++++||||++++|++.+ +...++|||
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E  109 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP  109 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEE
Confidence            45688999999999999986432 3457999998643 35556889999999999999999999999865 568999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+++++|.+++.......++..++.++.|++.||.|||+.   +|+||||||+|||++     +++.+||+|||+++...
T Consensus       110 ~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~-----~~~~~kL~DFG~~~~~~  181 (311)
T d1r0pa_         110 YMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLD-----EKFTVKVADFGLARDMY  181 (311)
T ss_dssp             CCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC-----TTCCEEECSSGGGCCTT
T ss_pred             EeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeEC-----CCCCEEEecccchhhcc
Confidence            9999999999988878889999999999999999999999   999999999999998     88899999999998765


Q ss_pred             CCCCc---ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          648 KDQTR---TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       648 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      .....   ......||+.|+|||.+....++.++||||||+++|||++|+.||........       ....    ...+
T Consensus       182 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~-------~~~~----i~~g  250 (311)
T d1r0pa_         182 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-------ITVY----LLQG  250 (311)
T ss_dssp             TTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------------CHHH----HHTT
T ss_pred             ccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHH-------HHHH----HHcC
Confidence            43322   22345689999999999999999999999999999999999888864321110       1111    1111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ..       +.  .+....+.+.+|+.+||+.||++||||.||+++|+++..
T Consensus       251 ~~-------~~--~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~  293 (311)
T d1r0pa_         251 RR-------LL--QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  293 (311)
T ss_dssp             CC-------CC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CC-------CC--CcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            10       00  111224568899999999999999999999999988764

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3e-45  Score=386.65  Aligned_cols=259  Identities=25%  Similarity=0.369  Sum_probs=208.9

Q ss_pred             hhcccccccccccceEEEEEEec---cCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      .+.+.+.||+|+||+||+|+.+.   ..++..||||++.... ....++|.+|++++++++||||+++++++.+.+..++
T Consensus        14 ~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~   93 (301)
T d1lufa_          14 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCL   93 (301)
T ss_dssp             GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEE
Confidence            46678999999999999999863   2355789999986543 4456789999999999999999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccC-----------------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCc
Q 047157          565 VYELMPNGTLSNFLFHEG-----------------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQN  621 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~-----------------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~N  621 (788)
                      ||||+++|+|.+++....                       ..+++..++.|+.||+.||+|||++   +|+||||||+|
T Consensus        94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~ivHrDlKp~N  170 (301)
T d1lufa_          94 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRN  170 (301)
T ss_dssp             EEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred             EEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---CeEeeEEcccc
Confidence            999999999999996432                       2478899999999999999999999   99999999999


Q ss_pred             EEeccCCCCCCCcEEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCC-CCCCc
Q 047157          622 VLLDLKTLDTNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR-RHIEL  699 (788)
Q Consensus       622 Ill~~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~-~p~~~  699 (788)
                      ||++     .++.+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++|. .||..
T Consensus       171 ILld-----~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~  245 (301)
T d1lufa_         171 CLVG-----ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG  245 (301)
T ss_dssp             EEEC-----GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             eEEC-----CCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCC
Confidence            9999     788999999999986644322 2233467889999999999999999999999999999999996 56655


Q ss_pred             cccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          700 SRVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ....+.            ...+.++.....         +...+.++.+|+.+||+.||++||||.||+++|+++++
T Consensus       246 ~~~~e~------------~~~v~~~~~~~~---------p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~  301 (301)
T d1lufa_         246 MAHEEV------------IYYVRDGNILAC---------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  301 (301)
T ss_dssp             SCHHHH------------HHHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             CCHHHH------------HHHHHcCCCCCC---------CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            422211            111222221111         11223568899999999999999999999999998864

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-46  Score=383.95  Aligned_cols=258  Identities=24%  Similarity=0.343  Sum_probs=199.4

Q ss_pred             HhhcccccccccccceEEEEEEecc-Ccceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLK-DTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      ..+.+.+.||+|+||+||+|.+... +....||||++....   .+..++|.+|++++++++||||+++++++.+ +..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            3467789999999999999987633 345689999986532   3445789999999999999999999999966 4678


Q ss_pred             EEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCc
Q 047157          564 LVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGIS  643 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a  643 (788)
                      +||||+++|+|.+++......+++..++.++.||++||.|||++   +|+||||||+|||++     .++.+||+|||++
T Consensus        87 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~-----~~~~vkl~DfGl~  158 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLA-----TRDLVKIGDFGLM  158 (273)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEE-----ETTEEEECCCTTC
T ss_pred             eeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccc-----cccceeeccchhh
Confidence            99999999999999887777899999999999999999999999   999999999999999     7789999999999


Q ss_pred             cccCCCCCc--ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHH
Q 047157          644 KLLNKDQTR--TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       644 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      +........  ......++..|+|||.+.+..++.++||||||+++|||+| |+.||......+.           . ..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~-----------~-~~  226 (273)
T d1u46a_         159 RALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI-----------L-HK  226 (273)
T ss_dssp             EECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-----------H-HH
T ss_pred             hhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHH-----------H-HH
Confidence            987554332  2233567889999999999999999999999999999998 8999975432221           1 11


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      +.....        ........+..+.+|+.+||+.||++|||++||++.|++.
T Consensus       227 i~~~~~--------~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         227 IDKEGE--------RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             HHTSCC--------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHhCCC--------CCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            111110        0111112235688999999999999999999999999763

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-45  Score=383.34  Aligned_cols=255  Identities=22%  Similarity=0.291  Sum_probs=205.7

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch------HHHHHHHHHHHHHhcCCCccccceEeeEEecCCe
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI------EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDK  561 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  561 (788)
                      ..|.+.+.||+|+||+||+|..+  .++..||||.+.+..      ....+.+.+|++++++++|||||++++++.+.+.
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~--~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   87 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREK--STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD   87 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cCEEEeEEEecCCCeEEEEEEEC--CCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            35778899999999999999886  677899999986432      1235789999999999999999999999999999


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      .+|||||+++|+|.+++.+. ..+++..+..++.||+.||+|||++   +|+||||||+|||++..+. ....+||+|||
T Consensus        88 ~~iv~E~~~gg~L~~~i~~~-~~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~-~~~~vkl~DfG  162 (293)
T d1jksa_          88 VILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNV-PKPRIKIIDFG  162 (293)
T ss_dssp             EEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSS-SSCCEEECCCT
T ss_pred             EEEEEEcCCCccccchhccc-cccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCC-cccceEecchh
Confidence            99999999999999999665 4789999999999999999999999   9999999999999984331 23469999999


Q ss_pred             CccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      ++........  .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+..            ...
T Consensus       163 ~a~~~~~~~~--~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~------------~~i  228 (293)
T d1jksa_         163 LAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL------------ANV  228 (293)
T ss_dssp             TCEECTTSCB--CSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------------HHH
T ss_pred             hhhhcCCCcc--ccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHH------------HHH
Confidence            9987654322  23457899999999999999999999999999999999999999765322210            111


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      ......      ............+.+|+.+||+.||++|||++|+++
T Consensus       229 ~~~~~~------~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         229 SAVNYE------FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             HTTCCC------CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HhcCCC------CCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            111100      000001122456788999999999999999999987

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-45  Score=386.46  Aligned_cols=257  Identities=28%  Similarity=0.424  Sum_probs=204.2

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc-hHHHHHHHHHHHHHhcCC-CccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD-IEKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .+.+.++||+|+||+||+|.++..+....||||++... .....++|.+|+++|+++ +||||+++++++.+++..++||
T Consensus        11 ~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~   90 (309)
T d1fvra_          11 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI   90 (309)
T ss_dssp             GCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEE
Confidence            45667899999999999999985555557899988643 344566899999999998 7999999999999999999999


Q ss_pred             ecCCCCCHhHhhhcc---------------CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCC
Q 047157          567 ELMPNGTLSNFLFHE---------------GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDT  631 (788)
Q Consensus       567 e~~~~gsL~~~l~~~---------------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~  631 (788)
                      ||+++|+|.++|+..               ...+++..+..++.||++||.|||++   +|+||||||+|||++     .
T Consensus        91 ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~-----~  162 (309)
T d1fvra_          91 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG-----E  162 (309)
T ss_dssp             CCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----G
T ss_pred             EecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEc-----C
Confidence            999999999999643               36789999999999999999999999   999999999999998     7


Q ss_pred             CCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCC-CCCccccccccccch
Q 047157          632 NYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR-HIELSRVEEESEEVD  710 (788)
Q Consensus       632 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~-p~~~~~~~~~~~~~~  710 (788)
                      ++.+||+|||+++.......  .....||..|+|||.+.+..++.++|||||||++|||++|.. ||......+      
T Consensus       163 ~~~~kl~DfG~a~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~------  234 (309)
T d1fvra_         163 NYVAKIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE------  234 (309)
T ss_dssp             GGCEEECCTTCEESSCEECC--C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------
T ss_pred             CCceEEcccccccccccccc--ccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHH------
Confidence            88999999999986543222  223468999999999999999999999999999999999765 565432111      


Q ss_pred             hhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          711 IVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       711 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                            ....+..+.       .+..  .....+++.+|+.+||+.||++||||+||++.|+++.+
T Consensus       235 ------~~~~i~~~~-------~~~~--~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~  285 (309)
T d1fvra_         235 ------LYEKLPQGY-------RLEK--PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  285 (309)
T ss_dssp             ------HHHHGGGTC-------CCCC--CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ------HHHHHHhcC-------CCCC--CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence                  111111111       1111  11234678899999999999999999999999988764

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-44  Score=383.28  Aligned_cols=248  Identities=26%  Similarity=0.297  Sum_probs=205.8

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||.||+|+.+  .++..||||++++..   ....+.+.+|+.+|++++||||+++++++.+.+..|+|
T Consensus         6 dy~~~~~lG~G~fg~V~~~~~~--~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           6 DFDYLKLLGKGTFGKVILVREK--ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hcEEEEEEecCcCeEEEEEEEC--CCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence            4777899999999999999886  677899999997543   23457789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++|+|.+++.+. ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+++.
T Consensus        84 ~ey~~gg~L~~~~~~~-~~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~-----~~g~vkl~DFG~a~~  154 (337)
T d1o6la_          84 MEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLD-----KDGHIKITDFGLCKE  154 (337)
T ss_dssp             EECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEEC-----TTSCEEECCCTTCBC
T ss_pred             eeccCCCchhhhhhcc-cCCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEec-----CCCCEEEeecccccc
Confidence            9999999999998665 5678889999999999999999999   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+.            ........
T Consensus       155 ~~~~~~-~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~------------~~~i~~~~  221 (337)
T d1o6la_         155 GISDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL------------FELILMEE  221 (337)
T ss_dssp             SCCTTC-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHHHCC
T ss_pred             cccCCc-ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHH------------HHHHhcCC
Confidence            644332 23346899999999999999999999999999999999999999986543211            11111111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS-----MKKVIHM  770 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~  770 (788)
                      .        ..  +.....++.+|+.+||+.||++||+     ++|++++
T Consensus       222 ~--------~~--p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H  261 (337)
T d1o6la_         222 I--------RF--PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             C--------CC--CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             C--------CC--CccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence            1        11  1112456788999999999999995     8888863

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-45  Score=379.64  Aligned_cols=248  Identities=29%  Similarity=0.412  Sum_probs=194.2

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEec-CCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE-EDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lV~e  567 (788)
                      .+.+.+.||+|+||.||+|.++    +..||||++++.  ...+.+.+|++++++++||||++++|++.+ .+..++|||
T Consensus         8 ~~~~~~~lG~G~fg~Vy~~~~~----~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~e   81 (262)
T d1byga_           8 ELKLLQTIGKGEFGDVMLGDYR----GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   81 (262)
T ss_dssp             GEEEEEEEEECSSCEEEEEEET----TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred             HeEEeEEEecCCCeEEEEEEEC----CeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEe
Confidence            4567899999999999999873    458999999764  345789999999999999999999999865 456899999


Q ss_pred             cCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          568 LMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      |+++|+|.+++.+.. ..+++..++.++.||+.||.|||+.   +|+||||||+|||++     .++.+||+|||+++..
T Consensus        82 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~-----~~~~~kl~dfg~s~~~  153 (262)
T d1byga_          82 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVS-----EDNVAKVSDFGLTKEA  153 (262)
T ss_dssp             CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC-----TTSCEEECCCCC----
T ss_pred             ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheec-----CCCCEeecccccceec
Confidence            999999999997543 3589999999999999999999999   999999999999998     8889999999999865


Q ss_pred             CCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ....    ....++..|+|||++.+..+++++||||||+++|||+| |+.||......+.        ..    ....+.
T Consensus       154 ~~~~----~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~--------~~----~i~~~~  217 (262)
T d1byga_         154 SSTQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--------VP----RVEKGY  217 (262)
T ss_dssp             ------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH--------HH----HHTTTC
T ss_pred             CCCC----ccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHH--------HH----HHHcCC
Confidence            4322    23467889999999999999999999999999999998 6777765432221        11    111111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                             .+..  +....+++.+|+.+||+.||++||||.||+++|+.+.
T Consensus       218 -------~~~~--~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~  258 (262)
T d1byga_         218 -------KMDA--PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK  258 (262)
T ss_dssp             -------CCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -------CCCC--CccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence                   1111  1123357889999999999999999999999998753

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-45  Score=388.19  Aligned_cols=256  Identities=25%  Similarity=0.402  Sum_probs=202.6

Q ss_pred             hhcccccccccccceEEEEEEeccCc--ceeeeeeecccc-hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDT--QIEIAVKKLEKD-IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~l~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.++||+|+||+||+|.+...+.  ..+||+|++... .....++|.+|++++++++|||||+++++|.++ ..+++
T Consensus        10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v   88 (317)
T d1xkka_          10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLI   88 (317)
T ss_dssp             TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEE
T ss_pred             HCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEE
Confidence            36778999999999999998863222  346899988643 344567899999999999999999999999875 56788


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      +|++.+++|.+++......+++..++.++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+++.
T Consensus        89 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~-----~~~~~kl~DFGla~~  160 (317)
T d1xkka_          89 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVK-----TPQHVKITDFGLAKL  160 (317)
T ss_dssp             EECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE-----ETTEEEECCCSHHHH
T ss_pred             EEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeC-----CCCCeEeecccccee
Confidence            899999999999988888899999999999999999999999   999999999999998     788999999999997


Q ss_pred             cCCCCCcc-cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCccccccccccchhhhHHHHHHHhhc
Q 047157          646 LNKDQTRT-DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRVEEESEEVDIVLSDWVISCMLS  723 (788)
Q Consensus       646 ~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  723 (788)
                      ........ .....||+.|+|||.+.+..++.++|||||||++|||+| |+.||......+.        ..    ....
T Consensus       161 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~--------~~----~i~~  228 (317)
T d1xkka_         161 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--------SS----ILEK  228 (317)
T ss_dssp             TTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGH--------HH----HHHH
T ss_pred             cccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHH--------HH----HHHc
Confidence            75543332 233568999999999999999999999999999999998 7888875532221        11    1111


Q ss_pred             ccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          724 RNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       724 ~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      +.       .+  ..+....+.+.+|+.+||+.||++|||+.||+++|+.+
T Consensus       229 ~~-------~~--~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~  270 (317)
T d1xkka_         229 GE-------RL--PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  270 (317)
T ss_dssp             TC-------CC--CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CC-------CC--CCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHH
Confidence            11       00  11112345688899999999999999999999988754

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.6e-44  Score=380.83  Aligned_cols=245  Identities=27%  Similarity=0.317  Sum_probs=203.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||+||+|+.+  .+++.||||++.+..   ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus         5 dy~i~~~lG~G~fg~Vy~a~~~--~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv   82 (316)
T d1fota_           5 DFQILRTLGTGSFGRVHLIRSR--HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   82 (316)
T ss_dssp             GEEEEEEEEECSSCEEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             HeEEEEEEecCcCcEEEEEEEC--CCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeE
Confidence            3778899999999999999886  667899999997543   23456889999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++|+|..++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+++.
T Consensus        83 mE~~~gg~l~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~-----~~g~vkL~DFG~a~~  153 (316)
T d1fota_          83 MDYIEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLD-----KNGHIKITDFGFAKY  153 (316)
T ss_dssp             ECCCCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEEC-----TTSCEEECCCSSCEE
T ss_pred             eeecCCcccccccccc-ccccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEc-----CCCCEEEecCccceE
Confidence            9999999999988654 5678888889999999999999999   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      ....    .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+.            ........
T Consensus       154 ~~~~----~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~------------~~~i~~~~  217 (316)
T d1fota_         154 VPDV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT------------YEKILNAE  217 (316)
T ss_dssp             CSSC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH------------HHHHHHCC
T ss_pred             eccc----cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHH------------HHHHHcCC
Confidence            6533    2346899999999999999999999999999999999999999976432211            11111111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIHM  770 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~  770 (788)
                      .        ..  +....+.+.+++.+||+.||++||     |++|++++
T Consensus       218 ~--------~~--p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         218 L--------RF--PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             C--------CC--CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             C--------CC--CCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence            1        00  111235678899999999999996     89999864

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-44  Score=380.29  Aligned_cols=250  Identities=16%  Similarity=0.201  Sum_probs=206.3

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYEL  568 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e~  568 (788)
                      .|.+.+.||+|+||+||+|.++  .++..||||.++.... ....+.+|+++|++++||||+++++++.+++..||||||
T Consensus         6 rY~i~~~lG~G~fg~Vy~~~~~--~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           6 KYMIAEDLGRGEFGIVHRCVET--SSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ceEEEEEEecCCCeEEEEEEEC--CCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            3677899999999999999887  6778999999976533 345788999999999999999999999999999999999


Q ss_pred             CCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccCC
Q 047157          569 MPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLNK  648 (788)
Q Consensus       569 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~~  648 (788)
                      +++|+|.+++...+..+++.++..++.||+.||.|||++   +|+||||||+|||++.+   ....+||+|||++.....
T Consensus        83 ~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~---~~~~ikl~DFG~~~~~~~  156 (321)
T d1tkia_          83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTR---RSSTIKIIEFGQARQLKP  156 (321)
T ss_dssp             CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSS---SCCCEEECCCTTCEECCT
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCC---CceEEEEcccchhhcccc
Confidence            999999999987767899999999999999999999999   99999999999999732   345899999999987644


Q ss_pred             CCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccccc
Q 047157          649 DQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNLQV  728 (788)
Q Consensus       649 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (788)
                      ..  ......+++.|+|||.+.+..++.++||||+||++|||++|+.||......+.            ........   
T Consensus       157 ~~--~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~------------~~~i~~~~---  219 (321)
T d1tkia_         157 GD--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI------------IENIMNAE---  219 (321)
T ss_dssp             TC--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------------HHHHHHTC---
T ss_pred             CC--cccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHH------------HHHHHhCC---
Confidence            32  22345789999999999999999999999999999999999999976532211            11111111   


Q ss_pred             cccCCCCCccc--HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          729 LVSHDPEVLSD--LERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       729 l~~~~~~~~~~--~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                           ......  ....+++.+|+.+||+.||++|||++|+++
T Consensus       220 -----~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         220 -----YTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             -----CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -----CCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                 100000  012456788999999999999999999997

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-45  Score=383.83  Aligned_cols=262  Identities=27%  Similarity=0.380  Sum_probs=198.5

Q ss_pred             HHhhcccccccccccceEEEEEEecc---Ccceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecC-C
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLK---DTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEE-D  560 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~-~  560 (788)
                      ...|.+.++||+|+||.||+|.+...   ..++.||||++.... ....+.+.+|...+.++ +|+||+++++++.+. .
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   91 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence            35677889999999999999998632   345689999986533 34456788888888776 789999999988664 4


Q ss_pred             eEEEEEecCCCCCHhHhhhccC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEG---------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLD  625 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~  625 (788)
                      ..++||||+++|+|.+++....               ..+++..+..++.||++||.|||++   +|+||||||+||||+
T Consensus        92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~NILl~  168 (299)
T d1ywna1          92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLS  168 (299)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC
T ss_pred             eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCccceeEC
Confidence            6899999999999999996532               3478999999999999999999999   999999999999998


Q ss_pred             cCCCCCCCcEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCC-CCCCccccc
Q 047157          626 LKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR-RHIELSRVE  703 (788)
Q Consensus       626 ~~~~~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~-~p~~~~~~~  703 (788)
                           .++.+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||++|. .||......
T Consensus       169 -----~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~  243 (299)
T d1ywna1         169 -----EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID  243 (299)
T ss_dssp             -----GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS
T ss_pred             -----CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH
Confidence                 7889999999999876544332 334467999999999999999999999999999999999875 567543221


Q ss_pred             cccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          704 EESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       704 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      +.           .......+....         .+....+++.+++.+||+.||++|||++||+++|+++++
T Consensus       244 ~~-----------~~~~~~~~~~~~---------~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq  296 (299)
T d1ywna1         244 EE-----------FCRRLKEGTRMR---------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  296 (299)
T ss_dssp             HH-----------HHHHHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HH-----------HHHHHhcCCCCC---------CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            10           111111111111         111224568899999999999999999999999998754

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-44  Score=376.34  Aligned_cols=271  Identities=21%  Similarity=0.241  Sum_probs=201.0

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEecCC----eEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED----KRLL  564 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~~~l  564 (788)
                      ++-+.+.||+|+||+||+|++    .+..||||+++.... .......|+..+.+++||||+++++++.+.+    ..++
T Consensus         4 ~~~l~~~iG~G~fg~Vy~~~~----~g~~vAvK~~~~~~~-~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           4 TIVLQESIGKGRFGEVWRGKW----RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GEEEEEEEECCSSSEEEEEEE----TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE----CCEEEEEEEECccch-hHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            455678999999999999986    356999999865432 2223445666677889999999999997654    6799


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhc-----cCCceEecCCCCCcEEeccCCCCCCCcEEEee
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE-----CETQIIHCDIKPQNVLLDLKTLDTNYMAKISD  639 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-----~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~D  639 (788)
                      ||||+++|+|.+++.+.  .+++..++.++.|++.||.|||+.     ...+|+||||||+||||+     .++.+||+|
T Consensus        79 v~Ey~~~g~L~~~l~~~--~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~-----~~~~~Kl~D  151 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK-----KNGTCCIAD  151 (303)
T ss_dssp             EEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEEC-----TTSCEEECC
T ss_pred             EEecccCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEc-----CCCCeEEEe
Confidence            99999999999999654  689999999999999999999973     134999999999999998     888999999


Q ss_pred             cCCccccCCCCCc---ccccccCCccccCcccccCC------CCCccCcchhhHHHHHHHHhCCCCCCccccccccccch
Q 047157          640 FGISKLLNKDQTR---TDTNMRGTMGYVAPEWLRNV------PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVD  710 (788)
Q Consensus       640 fg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~  710 (788)
                      ||+++........   ......||+.|+|||++.+.      .++.++|||||||+||||+||..|+.............
T Consensus       152 FGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~  231 (303)
T d1vjya_         152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL  231 (303)
T ss_dssp             CTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTT
T ss_pred             cCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhc
Confidence            9999876543322   22346799999999998754      36779999999999999999998875433222111000


Q ss_pred             ---hhhHHHHHHHhhcccccccccCC-CCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          711 ---IVLSDWVISCMLSRNLQVLVSHD-PEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       711 ---~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                         ...............+    .+. +......+....+.+|+.+||+.||++|||+.||+++|+++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~----~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~  296 (303)
T d1vjya_         232 VPSDPSVEEMRKVVCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             SCSSCCHHHHHHHHTTSCC----CCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHhcccc----CCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence               0011111111111111    111 122223456677999999999999999999999999998764

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-44  Score=380.27  Aligned_cols=261  Identities=28%  Similarity=0.401  Sum_probs=206.3

Q ss_pred             HHhhcccccccccccceEEEEEEecc-----Ccceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecC
Q 047157          487 EATKGFSKLVGTGSSGKVYRGILRLK-----DTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEE  559 (788)
Q Consensus       487 ~~t~~~~~~lg~G~~g~Vy~~~~~~~-----~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~  559 (788)
                      ...|.+.++||+|+||.||+|+....     .....||||++.... .....++.+|...+.++ +|||||+++++|.++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            34567789999999999999987532     223579999997654 34457889999999888 899999999999999


Q ss_pred             CeEEEEEecCCCCCHhHhhhccC---------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEe
Q 047157          560 DKRLLVYELMPNGTLSNFLFHEG---------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLL  624 (788)
Q Consensus       560 ~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll  624 (788)
                      +..++||||+++|+|.+++....               ..+++.+++.++.||+.||+|||++   +||||||||+|||+
T Consensus        92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~NiLl  168 (299)
T d1fgka_          92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV  168 (299)
T ss_dssp             SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred             CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeecccceee
Confidence            99999999999999999996543               4579999999999999999999999   99999999999999


Q ss_pred             ccCCCCCCCcEEEeecCCccccCCCCCc-ccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHh-CCCCCCcccc
Q 047157          625 DLKTLDTNYMAKISDFGISKLLNKDQTR-TDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIIC-GRRHIELSRV  702 (788)
Q Consensus       625 ~~~~~~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~ellt-g~~p~~~~~~  702 (788)
                      +     .++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus       169 ~-----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~  243 (299)
T d1fgka_         169 T-----EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV  243 (299)
T ss_dssp             C-----TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             c-----CCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCH
Confidence            8     7889999999999977554332 2344678999999999999999999999999999999998 6788865432


Q ss_pred             ccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          703 EEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       703 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                      ..            +...+..+..       +  ..+....+++.+|+.+||+.||++|||+.||++.|++++.
T Consensus       244 ~~------------~~~~i~~~~~-------~--~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         244 EE------------LFKLLKEGHR-------M--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             HH------------HHHHHHTTCC-------C--CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HH------------HHHHHHcCCC-------C--CCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence            11            1111111111       1  1111234578899999999999999999999999998754

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3e-44  Score=374.64  Aligned_cols=257  Identities=20%  Similarity=0.270  Sum_probs=200.1

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCC----e
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED----K  561 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~  561 (788)
                      .|.+.+.||+|+||+||+|.+.  .+++.||||.++...   ....+.+.+|++++++++||||+++++++...+    .
T Consensus         8 rY~i~~~lG~G~fg~Vy~a~~~--~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           8 RYELGEILGFGGMSEVHLARDL--RLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             eeEEeEEEeeCCCeEEEEEEEC--CCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            4778899999999999999886  678899999986432   345568999999999999999999999987654    4


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      .||||||+++++|.+++... ..+++.++..++.||+.||.|||++   +|+||||||+|||++     .++..+|+|||
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~-~~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~-----~~~~~~l~d~~  156 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMIS-----ATNAVKVMDFG  156 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEE-----TTSCEEECCCT
T ss_pred             EEEEEECCCCCEehhhhccc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccC-----ccccceeehhh
Confidence            78999999999999988655 5689999999999999999999999   999999999999998     78899999999


Q ss_pred             CccccCCCCC--cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHH
Q 047157          642 ISKLLNKDQT--RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVIS  719 (788)
Q Consensus       642 ~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~  719 (788)
                      .+........  .......||+.|+|||++.+..+++++|||||||++|||+||+.||......+.           ...
T Consensus       157 ~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-----------~~~  225 (277)
T d1o6ya_         157 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-----------AYQ  225 (277)
T ss_dssp             TCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-----------HHH
T ss_pred             hhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHH-----------HHH
Confidence            9876543322  233446799999999999999999999999999999999999999975432211           111


Q ss_pred             HhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-CHHHHHHHhhcC
Q 047157          720 CMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-SMKKVIHMLEGT  774 (788)
Q Consensus       720 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~evl~~L~~~  774 (788)
                      ........       ........++++.+++.+||+.||++|| |++++++.|.++
T Consensus       226 ~~~~~~~~-------~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~  274 (277)
T d1o6ya_         226 HVREDPIP-------PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  274 (277)
T ss_dssp             HHHCCCCC-------GGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHhcCCCC-------CchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHH
Confidence            11111110       0001112346788899999999999999 899999988764

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=7.8e-44  Score=369.89  Aligned_cols=251  Identities=24%  Similarity=0.306  Sum_probs=204.3

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---------HHHHHHHHHHHHHhcCCC-ccccceEeeEEec
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---------EKTNEEFMTELKIIGRTH-HKNLVRLLGFCSE  558 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---------~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~  558 (788)
                      .|.+.+.||+|+||+||+|+..  .+++.||||++....         ....+.+.+|+.++++++ ||||+++++++.+
T Consensus         4 ~y~~~~~iG~G~~g~V~~~~~~--~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~   81 (277)
T d1phka_           4 NYEPKEILGRGVSSVVRRCIHK--PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   81 (277)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             cCEEceEEecCcCeEEEEEEEC--CCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence            4677899999999999999876  677899999986432         234457899999999997 9999999999999


Q ss_pred             CCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEe
Q 047157          559 EDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKIS  638 (788)
Q Consensus       559 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~  638 (788)
                      ++..||||||+++|+|.+++... ..+++.++..++.||++||+|||++   +|+||||||+|||++     .++.+||+
T Consensus        82 ~~~~~ivmE~~~~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~-----~~~~~kl~  152 (277)
T d1phka_          82 NTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLD-----DDMNIKLT  152 (277)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----TTCCEEEC
T ss_pred             CcceEEEEEcCCCchHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEc-----CCCCeEEc
Confidence            99999999999999999999765 4689999999999999999999999   999999999999998     88899999


Q ss_pred             ecCCccccCCCCCcccccccCCccccCcccccC------CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhh
Q 047157          639 DFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN------VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIV  712 (788)
Q Consensus       639 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~  712 (788)
                      |||+++.+.....  .....||+.|+|||++.+      ..++.++||||+||++|||++|+.||......+.       
T Consensus       153 DFG~a~~~~~~~~--~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~-------  223 (277)
T d1phka_         153 DFGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM-------  223 (277)
T ss_dssp             CCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-------
T ss_pred             cchheeEccCCCc--eeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHH-------
Confidence            9999987754332  234679999999999853      3578899999999999999999999976532211       


Q ss_pred             hHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          713 LSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       713 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                           ......+...      +.........+++.+++.+||+.||++|||++||+++
T Consensus       224 -----~~~i~~~~~~------~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         224 -----LRMIMSGNYQ------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             -----HHHHHHTCCC------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             -----HHHHHhCCCC------CCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence                 1111111111      0111112334678899999999999999999999764

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-44  Score=379.54  Aligned_cols=260  Identities=24%  Similarity=0.288  Sum_probs=202.7

Q ss_pred             hhccc-ccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcC-CCccccceEeeEEec----CCeE
Q 047157          489 TKGFS-KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGR-THHKNLVRLLGFCSE----EDKR  562 (788)
Q Consensus       489 t~~~~-~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~----~~~~  562 (788)
                      .|.+. +.||+|+||+||+|.+.  .++..||||++++.     +.+.+|++++.+ .+||||+++++++.+    +...
T Consensus        12 ~y~i~~~~lG~G~fg~Vy~a~~~--~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~   84 (335)
T d2ozaa1          12 DYKVTSQVLGLGINGKVLQIFNK--RTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   84 (335)
T ss_dssp             TEEEEEEEEEECSSCEEEEEEET--TTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             CEEEeeEEeeeccCeEEEEEEEC--CCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence            35554 56999999999999886  56779999998653     346689988765 489999999999865    4678


Q ss_pred             EEEEecCCCCCHhHhhhccC-CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          563 LLVYELMPNGTLSNFLFHEG-QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      |+|||||++|+|.+++.+.+ ..+++.++..++.||+.||+|||++   +|+||||||+|||++...  ..+.+||+|||
T Consensus        85 ~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~--~~~~~Kl~DFG  159 (335)
T d2ozaa1          85 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKR--PNAILKLTDFG  159 (335)
T ss_dssp             EEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSS--TTCCEEECCCT
T ss_pred             EEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc---CCcccccccccccccccc--ccccccccccc
Confidence            99999999999999997653 5689999999999999999999999   999999999999998443  46789999999


Q ss_pred             CccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      +++.......  .....||+.|+|||++.+..++.++|||||||++|||+||+.||...........        .    
T Consensus       160 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~--------~----  225 (335)
T d2ozaa1         160 FAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG--------M----  225 (335)
T ss_dssp             TCEECCCCCC--CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC------------------
T ss_pred             eeeeccCCCc--cccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHH--------H----
Confidence            9987654332  2346799999999999999999999999999999999999999976432221100        0    


Q ss_pred             hcccccccccCCCCCc--ccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--hhcCcCCC
Q 047157          722 LSRNLQVLVSHDPEVL--SDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM--LEGTLEVG  778 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~~~~~~  778 (788)
                          ............  ......+++.+|+.+||+.||++|||+.|++++  +.+....+
T Consensus       226 ----~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~~  282 (335)
T d2ozaa1         226 ----KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP  282 (335)
T ss_dssp             ------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTTSSC
T ss_pred             ----HHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCCCCC
Confidence                000111111111  112345678999999999999999999999984  54433333

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-44  Score=381.80  Aligned_cols=263  Identities=27%  Similarity=0.422  Sum_probs=210.7

Q ss_pred             HHHHhhcccccccccccceEEEEEEec---cCcceeeeeeecccch-HHHHHHHHHHHHHhcCC-CccccceEeeEEecC
Q 047157          485 LQEATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRT-HHKNLVRLLGFCSEE  559 (788)
Q Consensus       485 l~~~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~  559 (788)
                      +....+.+.++||+|+||.||+|++..   ...+..||||+++... .....++.+|+.+++++ +|||||++++++.+.
T Consensus        20 ~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~   99 (311)
T d1t46a_          20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG   99 (311)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             CCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeC
Confidence            344567788999999999999998753   3566799999997543 44556899999999998 699999999999999


Q ss_pred             CeEEEEEecCCCCCHhHhhhccC-----------------CCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcE
Q 047157          560 DKRLLVYELMPNGTLSNFLFHEG-----------------QRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNV  622 (788)
Q Consensus       560 ~~~~lV~e~~~~gsL~~~l~~~~-----------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NI  622 (788)
                      +..++||||+++|+|.+++....                 ..+++..+..++.||++||+|||++   +|+||||||+||
T Consensus       100 ~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NI  176 (311)
T d1t46a_         100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI  176 (311)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred             CEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeecccccccc
Confidence            99999999999999999996542                 2578999999999999999999999   999999999999


Q ss_pred             EeccCCCCCCCcEEEeecCCccccCCCCC-cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCC-CCCcc
Q 047157          623 LLDLKTLDTNYMAKISDFGISKLLNKDQT-RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRR-HIELS  700 (788)
Q Consensus       623 ll~~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~-p~~~~  700 (788)
                      |++     .++.+||+|||+++....... .......||+.|+|||.+.+..++.++||||||+++|||+|+.. |+...
T Consensus       177 l~~-----~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~  251 (311)
T d1t46a_         177 LLT-----HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM  251 (311)
T ss_dssp             EEE-----TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             ccc-----ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCC
Confidence            998     788999999999997755433 23344678999999999999999999999999999999999554 45433


Q ss_pred             ccccccccchhhhHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          701 RVEEESEEVDIVLSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       701 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ...+.       +...    ...+ ..        ...+....+.+.+|+.+||+.||++||||+||+++|++.+
T Consensus       252 ~~~~~-------~~~~----i~~~-~~--------~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i  306 (311)
T d1t46a_         252 PVDSK-------FYKM----IKEG-FR--------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (311)
T ss_dssp             CSSHH-------HHHH----HHHT-CC--------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CHHHH-------HHHH----HhcC-CC--------CCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhh
Confidence            22110       1111    1111 11        1111123467889999999999999999999999998643

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.9e-43  Score=381.39  Aligned_cols=248  Identities=23%  Similarity=0.281  Sum_probs=197.8

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHH---HHHHHHhcCCCccccceEeeEEecCCeE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEF---MTELKIIGRTHHKNLVRLLGFCSEEDKR  562 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~---~~E~~~l~~l~hpniv~~~~~~~~~~~~  562 (788)
                      .|.+.++||+|+||.||+|+..  .++..||||.+.+..   ......+   .+|+++++.++||||+++++++.+.+..
T Consensus         5 dy~i~~~lG~G~fg~Vy~~~~~--~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~   82 (364)
T d1omwa3           5 DFSVHRIIGRGGFGEVYGCRKA--DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL   82 (364)
T ss_dssp             TEEEEEEEEECSSCEEEEEEET--TTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hCeeeeEEecCCCeEEEEEEEC--CCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence            3677899999999999999886  677899999986432   1122233   4457788889999999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      |+||||+++|+|.+++.+. ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+
T Consensus        83 ~ivmE~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~-----~~g~iKl~DFGl  153 (364)
T d1omwa3          83 SFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLD-----EHGHVRISDLGL  153 (364)
T ss_dssp             EEEECCCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----SSSCEEECCCTT
T ss_pred             EEEEEecCCCcHHHHHHhc-ccccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEc-----CCCcEEEeeece
Confidence            9999999999999999655 5678899999999999999999999   999999999999998     788999999999


Q ss_pred             ccccCCCCCcccccccCCccccCccccc-CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLR-NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      ++.+....   .....||+.|+|||++. +..+++++|||||||++|||++|+.||......+..        . .....
T Consensus       154 a~~~~~~~---~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~--------~-~~~~~  221 (364)
T d1omwa3         154 ACDFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--------E-IDRMT  221 (364)
T ss_dssp             CEECSSSC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHH--------H-HHHHS
T ss_pred             eeecCCCc---ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHH--------H-HHHhc
Confidence            98765432   23457999999999986 456899999999999999999999999765322210        0 00000


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPS-----MKKVIH  769 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~  769 (788)
                      ..        ..+..  +....+++.+|+.+||+.||++|||     ++|+++
T Consensus       222 ~~--------~~~~~--~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         222 LT--------MAVEL--PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             SS--------CCCCC--CSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             cc--------CCCCC--CCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            00        01111  1123456788999999999999999     688875

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-44  Score=377.12  Aligned_cols=260  Identities=25%  Similarity=0.413  Sum_probs=209.3

Q ss_pred             HhhcccccccccccceEEEEEEec---cCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRL---KDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  563 (788)
                      ..+.+.+.||+|+||+||+|.++.   ...+..||||+++... ......|.+|++++++++||||+++++++..++..+
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~   99 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL   99 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence            455678999999999999998752   1235689999997543 444567999999999999999999999999999999


Q ss_pred             EEEecCCCCCHhHhhhcc---------CCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCc
Q 047157          564 LVYELMPNGTLSNFLFHE---------GQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYM  634 (788)
Q Consensus       564 lV~e~~~~gsL~~~l~~~---------~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~  634 (788)
                      +||||+++|+|.+++...         ...+++..+..++.|+++||.|||++   +|+||||||+|||++     .+++
T Consensus       100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld-----~~~~  171 (308)
T d1p4oa_         100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA-----EDFT  171 (308)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEEC-----TTCC
T ss_pred             EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeec-----CCce
Confidence            999999999999998542         13468999999999999999999999   999999999999998     8889


Q ss_pred             EEEeecCCccccCCCCCcc-cccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCC-CCCCccccccccccchhh
Q 047157          635 AKISDFGISKLLNKDQTRT-DTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGR-RHIELSRVEEESEEVDIV  712 (788)
Q Consensus       635 ~kL~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~-~p~~~~~~~~~~~~~~~~  712 (788)
                      +||+|||+++.+....... .....+|+.|+|||.+.+..++.++||||||+++|||+||. .||......+        
T Consensus       172 ~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~--------  243 (308)
T d1p4oa_         172 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ--------  243 (308)
T ss_dssp             EEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH--------
T ss_pred             EEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHH--------
Confidence            9999999998765443322 33356899999999999999999999999999999999985 5665432211        


Q ss_pred             hHHHHHHHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCcC
Q 047157          713 LSDWVISCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTLE  776 (788)
Q Consensus       713 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~~  776 (788)
                          ....+.++.....         .....+.+.+++.+||+.||++||||+||+++|++.++
T Consensus       244 ----~~~~i~~~~~~~~---------p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         244 ----VLRFVMEGGLLDK---------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             ----HHHHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             ----HHHHHHhCCCCCC---------cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence                1111122211111         11223578899999999999999999999999998765

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.6e-43  Score=380.02  Aligned_cols=244  Identities=21%  Similarity=0.222  Sum_probs=203.7

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV  565 (788)
                      .|.+.+.||+|+||.||+|+++  .++..||||++.+..   ....+.+.+|+++|++++||||+++++++.+....++|
T Consensus        42 ~y~i~~~lG~G~fg~Vy~a~~~--~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v  119 (350)
T d1rdqe_          42 QFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV  119 (350)
T ss_dssp             GEEEEEEEEECSSCEEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CeEEEEEeecCcCcEEEEEEEC--CCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccc
Confidence            4677899999999999999886  677899999986532   23456789999999999999999999999999999999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+.+|+|.+++.+. ..+++..+..++.||+.||.|||++   +||||||||+|||++     .++.+||+|||+++.
T Consensus       120 ~e~~~~g~l~~~l~~~-~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~-----~~g~ikL~DFG~a~~  190 (350)
T d1rdqe_         120 MEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLID-----QQGYIQVTDFGFAKR  190 (350)
T ss_dssp             EECCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----TTSCEEECCCTTCEE
T ss_pred             cccccccchhhhHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccC-----CCCCEEeeeceeeee
Confidence            9999999999999665 4689999999999999999999999   999999999999998     788999999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhccc
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRN  725 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  725 (788)
                      +...    .....||+.|+|||++.+..++.++|||||||++|||++|+.||........            ........
T Consensus       191 ~~~~----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~------------~~~i~~~~  254 (350)
T d1rdqe_         191 VKGR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI------------YEKIVSGK  254 (350)
T ss_dssp             CSSC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHHHCC
T ss_pred             cccc----cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHH------------HHHHhcCC
Confidence            6533    2346799999999999999999999999999999999999999975432111            11111111


Q ss_pred             ccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 047157          726 LQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIH  769 (788)
Q Consensus       726 ~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~  769 (788)
                      .        ..  +......+.+++.+||+.||++|+     |++|+++
T Consensus       255 ~--------~~--p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         255 V--------RF--PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             C--------CC--CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             C--------CC--CccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence            1        11  112345678899999999999994     8999986

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-43  Score=376.73  Aligned_cols=247  Identities=25%  Similarity=0.322  Sum_probs=201.7

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch---HHHHHHHHHHHHHhc-CCCccccceEeeEEecCCeEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI---EKTNEEFMTELKIIG-RTHHKNLVRLLGFCSEEDKRLL  564 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~---~~~~~~~~~E~~~l~-~l~hpniv~~~~~~~~~~~~~l  564 (788)
                      .|.+.++||+|+||+||+|+++  .+++.||||++++..   ....+.+..|..++. .++||||+++++++.+++..|+
T Consensus         3 dy~i~~~iG~G~fg~Vy~~~~~--~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yi   80 (320)
T d1xjda_           3 DFILHKMLGKGSFGKVFLAEFK--KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF   80 (320)
T ss_dssp             TEEEEEEEEECSSSEEEEEEET--TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             CeEEeeEEecCCCcEEEEEEEC--CCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeE
Confidence            4678899999999999999887  678899999997542   233456677777765 6899999999999999999999


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ||||+++|+|.+++... ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+++
T Consensus        81 vmEy~~~g~L~~~i~~~-~~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~-----~~~~~kl~DFG~a~  151 (320)
T d1xjda_          81 VMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLD-----KDGHIKIADFGMCK  151 (320)
T ss_dssp             EEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEEC-----TTSCEEECCCTTCB
T ss_pred             EEeecCCCcHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeec-----CCCceeccccchhh
Confidence            99999999999999654 5678899999999999999999999   999999999999998     88899999999998


Q ss_pred             ccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc
Q 047157          645 LLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR  724 (788)
Q Consensus       645 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  724 (788)
                      ....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+.            .......
T Consensus       152 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~------------~~~i~~~  218 (320)
T d1xjda_         152 ENMLGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL------------FHSIRMD  218 (320)
T ss_dssp             CCCCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------------HHHHHHC
T ss_pred             hcccccc-cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHH------------HHHHHcC
Confidence            6644332 23346799999999999999999999999999999999999999976532221            1111111


Q ss_pred             cccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHH-HHHH
Q 047157          725 NLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMK-KVIH  769 (788)
Q Consensus       725 ~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-evl~  769 (788)
                              .+...  .....++.+|+.+||+.||++|||+. |+++
T Consensus       219 --------~~~~p--~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         219 --------NPFYP--RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             --------CCCCC--TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             --------CCCCC--ccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence                    11111  11245678999999999999999996 7764

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-43  Score=371.46  Aligned_cols=268  Identities=23%  Similarity=0.270  Sum_probs=201.1

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .|.+.++||+|+||+||+|.+.  .+++.||||+++...  ....+++.+|++++++++||||+++++++.+++..++||
T Consensus         3 ~Y~~~~~lG~G~fg~Vy~~~~~--~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~   80 (298)
T d1gz8a_           3 NFQKVEKIGEGTYGVVYKARNK--LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF   80 (298)
T ss_dssp             TEEEEEEEEECSSSEEEEEEET--TTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CCEeccEEecCcCeEEEEEEEC--CCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEE
Confidence            4667799999999999999986  667799999986543  233568899999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+.++.+..........+++..+..++.||+.||.|||++   +||||||||+|||++     .++.+||+|||.++..
T Consensus        81 e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~-----~~~~~kl~DFG~a~~~  152 (298)
T d1gz8a_          81 EFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLIN-----TEGAIKLADFGLARAF  152 (298)
T ss_dssp             ECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC-----TTSCEEECSTTHHHHH
T ss_pred             eecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeec-----ccCcceeccCCcceec
Confidence            99976545444445567799999999999999999999999   999999999999998     7789999999999876


Q ss_pred             CCCCCcccccccCCccccCcccccCCC-CCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhh-c-
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCML-S-  723 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~-  723 (788)
                      ..... ......||+.|+|||.+.... ++.++|||||||++|+|++|+.||...+..+....       ....... . 
T Consensus       153 ~~~~~-~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~-------i~~~~~~~~~  224 (298)
T d1gz8a_         153 GVPVR-TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-------IFRTLGTPDE  224 (298)
T ss_dssp             CCCSB-CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-------HHHHHCCCCT
T ss_pred             cCCcc-cceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHH-------HHHhcCCCch
Confidence            54332 233457899999999876655 57899999999999999999999976532211100       0000000 0 


Q ss_pred             c---ccccc---ccCCCCC-ccc-----HHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--hhcC
Q 047157          724 R---NLQVL---VSHDPEV-LSD-----LERFERMAMVGLWCNHPDPNLRPSMKKVIHM--LEGT  774 (788)
Q Consensus       724 ~---~~~~l---~~~~~~~-~~~-----~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~~  774 (788)
                      .   .....   ....+.. ..+     ....+++.+|+.+||+.||++|||++|++++  ++++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~  289 (298)
T d1gz8a_         225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV  289 (298)
T ss_dssp             TTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             hhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccC
Confidence            0   00000   0000000 001     1223578889999999999999999999986  5443

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-43  Score=372.91  Aligned_cols=261  Identities=21%  Similarity=0.262  Sum_probs=196.7

Q ss_pred             cccccccccceEEEEEEeccCcceeeeeeecccchHH-----HHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEEe
Q 047157          493 SKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEK-----TNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       493 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      .++||+|+||+||+|.++  .+++.||||+++.....     ..+.+.+|++++++++|||||++++++.+++..++|||
T Consensus         3 l~~lG~G~fg~Vy~~~~~--~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE   80 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDK--NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFD   80 (299)
T ss_dssp             EEEEEEETTEEEEEEECS--SCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEE
T ss_pred             ceEeccCcCeEEEEEEEC--CCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhh
Confidence            368999999999999876  66779999998654321     23468899999999999999999999999999999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+.++++..+. .....+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||+++...
T Consensus        81 ~~~~~~~~~~~-~~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~-----~~~~~KL~DFG~a~~~~  151 (299)
T d1ua2a_          81 FMETDLEVIIK-DNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLD-----ENGVLKLADFGLAKSFG  151 (299)
T ss_dssp             CCSEEHHHHHT-TCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC-----TTCCEEECCCGGGSTTT
T ss_pred             hhcchHHhhhh-hcccCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEec-----CCCccccccCccccccC
Confidence            99887766555 4456788899999999999999999999   999999999999998     88899999999998765


Q ss_pred             CCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcccc
Q 047157          648 KDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSRNL  726 (788)
Q Consensus       648 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  726 (788)
                      ..... .....||+.|+|||++.. ..++.++|||||||++|||++|+.||......+...        ...........
T Consensus       152 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~--------~i~~~~~~~~~  222 (299)
T d1ua2a_         152 SPNRA-YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLT--------RIFETLGTPTE  222 (299)
T ss_dssp             SCCCC-CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--------HHHHHHCCCCT
T ss_pred             CCccc-ccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHH--------HHHHhcCCCCh
Confidence            44322 233578999999998864 467999999999999999999999997653322111        01111100000


Q ss_pred             cc---c------ccCCCCCcccH-----HHHHHHHHHHhHccCCCCCCCCCHHHHHHH--hhc
Q 047157          727 QV---L------VSHDPEVLSDL-----ERFERMAMVGLWCNHPDPNLRPSMKKVIHM--LEG  773 (788)
Q Consensus       727 ~~---l------~~~~~~~~~~~-----~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~  773 (788)
                      ..   .      ...........     ...+.+.+|+.+||+.||++|||++|++++  +.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~  285 (299)
T d1ua2a_         223 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN  285 (299)
T ss_dssp             TTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTS
T ss_pred             hhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCC
Confidence            00   0      00000000011     123678899999999999999999999974  654

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-43  Score=363.94  Aligned_cols=241  Identities=24%  Similarity=0.411  Sum_probs=194.8

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchH------HHHHHHHHHHHHhcCCC--ccccceEeeEEecCC
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIE------KTNEEFMTELKIIGRTH--HKNLVRLLGFCSEED  560 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~  560 (788)
                      .|.+.++||+|+||+||+|+..  .++..||||.+.+...      ....++.+|+.++++++  ||||+++++++.+.+
T Consensus         5 ~Y~i~~~lG~G~fg~Vy~a~~~--~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~   82 (273)
T d1xwsa_           5 QYQVGPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD   82 (273)
T ss_dssp             TEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred             eEEEeEEEeeCCCeEEEEEEEC--CCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC
Confidence            5778899999999999999886  6678999999864321      12234678999999886  899999999999999


Q ss_pred             eEEEEEecCCC-CCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEee
Q 047157          561 KRLLVYELMPN-GTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISD  639 (788)
Q Consensus       561 ~~~lV~e~~~~-gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~D  639 (788)
                      ..++||||+.+ +++.+++... ..+++.++..++.||+.||.|||++   +|+||||||+|||++.    +.+.+||+|
T Consensus        83 ~~~lv~e~~~~~~~l~~~~~~~-~~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~----~~~~vkl~D  154 (273)
T d1xwsa_          83 SFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDL----NRGELKLID  154 (273)
T ss_dssp             EEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEET----TTTEEEECC
T ss_pred             eEEEEEEeccCcchHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEec----CCCeEEECc
Confidence            99999999976 5777777554 5789999999999999999999999   9999999999999972    346899999


Q ss_pred             cCCccccCCCCCcccccccCCccccCcccccCCCC-CccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHH
Q 047157          640 FGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPV-TTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVI  718 (788)
Q Consensus       640 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  718 (788)
                      ||++......   ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....                
T Consensus       155 FG~a~~~~~~---~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~----------------  215 (273)
T d1xwsa_         155 FGSGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----------------  215 (273)
T ss_dssp             CTTCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----------------
T ss_pred             cccceecccc---cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH----------------
Confidence            9999865432   2334679999999999987765 5779999999999999999999975311                


Q ss_pred             HHhhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          719 SCMLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       719 ~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                        ......  .+  ..      ...+++.+++.+||+.||++|||++|++++
T Consensus       216 --i~~~~~--~~--~~------~~s~~~~~li~~~L~~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         216 --IIRGQV--FF--RQ------RVSSECQHLIRWCLALRPSDRPTFEEIQNH  255 (273)
T ss_dssp             --HHHCCC--CC--SS------CCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             --Hhhccc--CC--CC------CCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence              000000  00  00      123567889999999999999999999873

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-42  Score=364.96  Aligned_cols=268  Identities=22%  Similarity=0.273  Sum_probs=199.0

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCC---CccccceEeeEEec----
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRT---HHKNLVRLLGFCSE----  558 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l---~hpniv~~~~~~~~----  558 (788)
                      ..|.+.++||+|+||+||+|++.. .+++.||||++....  ......+.+|+++++.|   +||||+++++++..    
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~-~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLK-NGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETT-TTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             CCEEEEEEEecccCeEEEEEEEEC-CCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            357778999999999999998752 235689999986432  22233456777776655   79999999999853    


Q ss_pred             -CCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          559 -EDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       559 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                       ....+++|||++++.+..........+++..+..++.||+.||+|||++   +|+||||||+|||++     ..+.+||
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~-----~~~~~kl  157 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVT-----SSGQIKL  157 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC-----TTCCEEE
T ss_pred             cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEc-----CCCCeee
Confidence             3478999999998887766666677889999999999999999999999   999999999999998     7889999


Q ss_pred             eecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHH
Q 047157          638 SDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWV  717 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~  717 (788)
                      +|||++......  .......||+.|+|||++.+.+++.++||||+||++|||++|+.||......+....        .
T Consensus       158 ~dfg~~~~~~~~--~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~--------i  227 (305)
T d1blxa_         158 ADFGLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK--------I  227 (305)
T ss_dssp             CSCCSCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH--------H
T ss_pred             cchhhhhhhccc--ccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHH--------H
Confidence            999998865432  233456899999999999999999999999999999999999999976543221110        0


Q ss_pred             HHHhhcc---ccc-------ccc-cC--CCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--hhcC
Q 047157          718 ISCMLSR---NLQ-------VLV-SH--DPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM--LEGT  774 (788)
Q Consensus       718 ~~~~~~~---~~~-------~l~-~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~~  774 (788)
                      .......   ...       ... ..  .+.........+.+.+|+.+||+.||++|||++|++++  ++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i  299 (305)
T d1blxa_         228 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL  299 (305)
T ss_dssp             HHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             HHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCc
Confidence            0000000   000       000 00  00000011223567789999999999999999999874  5443

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.3e-41  Score=356.52  Aligned_cols=260  Identities=22%  Similarity=0.255  Sum_probs=195.5

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .|.+.++||+|+||+||+|+++   +++.||||++....  ....+.+.+|+.+|++++||||+++++++.+++..++++
T Consensus         3 ~Y~~~~~iG~G~fg~Vy~~~~~---~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~   79 (286)
T d1ob3a_           3 KYHGLEKIGEGTYGVVYKAQNN---YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF   79 (286)
T ss_dssp             SEEEEEEEEEETTEEEEEEEET---TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             CceeccEEecCCCcEEEEEEeC---CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEE
Confidence            3567789999999999999874   55789999986542  334578999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      |++.++.+..+. .....+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||.+...
T Consensus        80 e~~~~~~~~~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~-----~~~~~kl~DfG~a~~~  150 (286)
T d1ob3a_          80 EHLDQDLKKLLD-VCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLIN-----REGELKIADFGLARAF  150 (286)
T ss_dssp             ECCSEEHHHHHH-TSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC-----TTSCEEECCTTHHHHH
T ss_pred             EeehhhhHHHHH-hhcCCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEc-----CCCCEEecccccceec
Confidence            999776665554 5557899999999999999999999998   999999999999998     7889999999999876


Q ss_pred             CCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc-
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR-  724 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  724 (788)
                      ..... ......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||......+....        ........ 
T Consensus       151 ~~~~~-~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~--------i~~~~~~~~  221 (286)
T d1ob3a_         151 GIPVR-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMR--------IFRILGTPN  221 (286)
T ss_dssp             CC----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH--------HHHHHCCCC
T ss_pred             ccCcc-ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHH--------HHHhhCCCC
Confidence            54322 2233468999999999865 4568999999999999999999999976432221110        00000000 


Q ss_pred             --c---cccccc---------CCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          725 --N---LQVLVS---------HDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       725 --~---~~~l~~---------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                        .   ......         ..+.........+.+.+++.+||+.||++|||++|+++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         222 SKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             TTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              0   000000         00000001122357789999999999999999999985

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.5e-40  Score=350.67  Aligned_cols=262  Identities=19%  Similarity=0.256  Sum_probs=201.0

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCcccc-ceEeeEEecCCeEEEEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNL-VRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpni-v~~~~~~~~~~~~~lV~e  567 (788)
                      .|.+.++||+|+||+||+|.+.  .+++.||||.+....  ..+++..|++++++++|+|+ +.+.++..+.+..++|||
T Consensus         8 rY~l~~~iG~G~fG~Vy~a~~~--~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme   83 (299)
T d1ckia_           8 RYRLGRKIGSGSFGDIYLGTDI--AAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   83 (299)
T ss_dssp             TEEEEEEEEECSSSEEEEEEET--TTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             EEEEeEEEeeCCCcEEEEEEEC--CCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEE
Confidence            4778899999999999999886  667899999876543  23467889999999987665 455566678889999999


Q ss_pred             cCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccccC
Q 047157          568 LMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLLN  647 (788)
Q Consensus       568 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~~  647 (788)
                      |+ +++|.+.+......+++..+..++.|++.||+|||++   +|+||||||+|||++..+  .+..+||+|||+++.+.
T Consensus        84 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~--~~~~vkl~DFG~a~~~~  157 (299)
T d1ckia_          84 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGK--KGNLVYIIDFGLAKKYR  157 (299)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGG--GTTCEEECCCSSCEECB
T ss_pred             Ec-CCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccC--CCceeeeeccCcceecc
Confidence            99 6678777777778899999999999999999999999   999999999999987443  56689999999999775


Q ss_pred             CCCC------cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHh
Q 047157          648 KDQT------RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCM  721 (788)
Q Consensus       648 ~~~~------~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  721 (788)
                      ....      .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.............    ... ...
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~----~~~-~~~  232 (299)
T d1ckia_         158 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYE----RIS-EKK  232 (299)
T ss_dssp             CTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HH----HHH-HHH
T ss_pred             ccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHH----Hhh-ccc
Confidence            4332      12334679999999999999999999999999999999999999997653322211110    000 000


Q ss_pred             hcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcC
Q 047157          722 LSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGT  774 (788)
Q Consensus       722 ~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~  774 (788)
                      .......+.         ...++++.+++..||+.||++||+++++.+.|+.+
T Consensus       233 ~~~~~~~~~---------~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         233 MSTPIEVLC---------KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             HHSCHHHHT---------TTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             CCCChhHhc---------cCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            000011110         01235678899999999999999999998888765

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=2e-40  Score=348.02  Aligned_cols=266  Identities=17%  Similarity=0.204  Sum_probs=208.8

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCc-cccceEeeEEecCCeEEEEE
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHH-KNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~~lV~  566 (788)
                      ..|.+.++||+|+||+||+|++.  .+++.||||.+....  ..+.+.+|++.++.++| +|++.+++++.+....++||
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~--~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vm   80 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNL--LNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   80 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEET--TTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             CceEEEEEEecCCCeEEEEEEEC--CCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEE
Confidence            35778899999999999999986  667899999886532  23456788888888865 89999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      ||+ +++|.+++...+..++...+..++.|++.||.|||++   +|+||||||+|||++.......+.+||+|||+++..
T Consensus        81 e~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~  156 (293)
T d1csna_          81 DLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY  156 (293)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred             Eec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEcccceeEEc
Confidence            999 7899999988778899999999999999999999999   999999999999997543335678999999999876


Q ss_pred             CCCCC------cccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          647 NKDQT------RTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       647 ~~~~~------~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      .....      .......||+.|+|||.+.+..+++++||||||+++|||++|+.||............     ......
T Consensus       157 ~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~-----~~i~~~  231 (293)
T d1csna_         157 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKY-----ERIGEK  231 (293)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHH-----HHHHHH
T ss_pred             ccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHH-----HHHHhc
Confidence            53322      1233467999999999999999999999999999999999999999765332221110     001111


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHhhcCc
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHMLEGTL  775 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~~~  775 (788)
                      ........+..         ..++++.+++..|++.+|++||+++.+.+.|+++.
T Consensus       232 ~~~~~~~~l~~---------~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~  277 (293)
T d1csna_         232 KQSTPLRELCA---------GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL  277 (293)
T ss_dssp             HHHSCHHHHTT---------TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             cCCCChHHhcC---------CCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            11111111111         11356788888999999999999999988887654

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-41  Score=360.32  Aligned_cols=270  Identities=25%  Similarity=0.258  Sum_probs=195.2

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCccccceEeeEEec------CCeE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNLVRLLGFCSE------EDKR  562 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~~~  562 (788)
                      +|...++||+|+||+||+|++.  .+++.||||++.....    .+.+|+++|++++||||+++++++..      ....
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~--~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~   94 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLC--DSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL   94 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEEC--CCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEE
Confidence            4566789999999999999987  6778999999975432    23479999999999999999999853      3357


Q ss_pred             EEEEecCCCCCHhHhhh--ccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCC-CcEEEee
Q 047157          563 LLVYELMPNGTLSNFLF--HEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTN-YMAKISD  639 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~--~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~-~~~kL~D  639 (788)
                      +|||||++++.+..+..  .....+++..+..++.||+.||+|||++   +|+||||||+|||++     .+ ..+||+|
T Consensus        95 ~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~-----~~~~~~kl~D  166 (350)
T d1q5ka_          95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLD-----PDTAVLKLCD  166 (350)
T ss_dssp             EEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEEC-----TTTCCEEECC
T ss_pred             EEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEe-----cCCCceeEec
Confidence            89999998765444332  3456789999999999999999999999   999999999999998     44 4899999


Q ss_pred             cCCccccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh---HH
Q 047157          640 FGISKLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL---SD  715 (788)
Q Consensus       640 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~  715 (788)
                      ||++........  .....|+..|+|||.+.+ ..++.++||||+||++|||++|+.||......+........+   ..
T Consensus       167 FG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~  244 (350)
T d1q5ka_         167 FGSAKQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR  244 (350)
T ss_dssp             CTTCEECCTTSC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             ccchhhccCCcc--cccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChH
Confidence            999987654332  234578999999998764 578999999999999999999999997654322111100000   00


Q ss_pred             HHHHHhh----cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--hhcC
Q 047157          716 WVISCML----SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM--LEGT  774 (788)
Q Consensus       716 ~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~~  774 (788)
                      ..+....    ...+.................+++.+|+.+||+.||++|||++|++++  ++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  309 (350)
T d1q5ka_         245 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  309 (350)
T ss_dssp             HHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             HhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence            0000000    001111100000001111234568889999999999999999999963  5544

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-40  Score=356.19  Aligned_cols=271  Identities=23%  Similarity=0.294  Sum_probs=195.2

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCC------
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED------  560 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------  560 (788)
                      .|.+.++||+|+||+||+|...  .+++.||||+++..  .....+.+.+|+++|++++|||||+++++|...+      
T Consensus        19 ~Y~~i~~lG~G~fg~V~~~~~~--~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          19 VYRDLQPVGSGAYGAVCSAVDG--RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             SEEEEEEC------CEEEEEET--TTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cEEEEEEEecCCCeEEEEEEEC--CCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            4667789999999999999886  66789999998743  2445678899999999999999999999997654      


Q ss_pred             eEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeec
Q 047157          561 KRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDF  640 (788)
Q Consensus       561 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Df  640 (788)
                      ..++||||+ +.+|..++..  ..+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+||
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~-----~~~~~kl~Df  165 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVN-----EDCELKILDF  165 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC-----TTCCEEECCC
T ss_pred             eEEEEEecc-cccHHHHHHh--ccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhcc-----cccccccccc
Confidence            579999999 6677777643  4689999999999999999999999   999999999999998     8889999999


Q ss_pred             CCccccCCCCCcccccccCCccccCcccccC-CCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh---HHH
Q 047157          641 GISKLLNKDQTRTDTNMRGTMGYVAPEWLRN-VPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL---SDW  716 (788)
Q Consensus       641 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~---~~~  716 (788)
                      |+++......    ....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||................   ...
T Consensus       166 g~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~  241 (346)
T d1cm8a_         166 GLARQADSEM----TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAE  241 (346)
T ss_dssp             TTCEECCSSC----CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred             cceeccCCcc----ccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHH
Confidence            9998764432    34578999999999876 457899999999999999999999997653322110000000   000


Q ss_pred             HHHHhh-------cccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH--hhcCcCC
Q 047157          717 VISCML-------SRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM--LEGTLEV  777 (788)
Q Consensus       717 ~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~~~~~  777 (788)
                      ......       ...+......... .........+.+|+.+||+.||++|||++|++++  ++++.+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~~  310 (346)
T d1cm8a_         242 FVQRLQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDT  310 (346)
T ss_dssp             HHHTCSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC--
T ss_pred             HHhhhcchhhhhhhccCCcccccchH-HhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCCc
Confidence            000000       0000000000000 0011223467789999999999999999999985  7665543

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-40  Score=356.89  Aligned_cols=274  Identities=20%  Similarity=0.271  Sum_probs=196.0

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch-HHHHHHHHHHHHHhcCCCccccceEeeEEecCC----eEEE
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEED----KRLL  564 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~~~l  564 (788)
                      |.+.++||+|+||+||+|...  .+++.||||++.... ....+.+.+|+++|++++||||+++++++....    ..++
T Consensus        10 Y~~~~~LG~G~fg~Vy~~~~~--~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~   87 (345)
T d1pmea_          10 YTNLSYIGEGAYGMVCSAYDN--VNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY   87 (345)
T ss_dssp             EEEEEECC---CCCEEEEEET--TTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred             eEEEEEEeeccCeEEEEEEEC--CCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence            667799999999999999876  677899999986543 445678899999999999999999999986543    2345


Q ss_pred             EEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          565 VYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       565 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      +++++.+++|.+++...  .+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+||+|||++.
T Consensus        88 l~~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~-----~~~~~kl~DfG~a~  157 (345)
T d1pmea_          88 LVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLN-----TTCDLKICDFGLAR  157 (345)
T ss_dssp             EEEECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC-----TTCCEEECCCTTCE
T ss_pred             EEEeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEEC-----CCCCEEEcccCcee
Confidence            55666799999999643  689999999999999999999999   999999999999998     78899999999998


Q ss_pred             ccCCCCC--cccccccCCccccCccccc-CCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHH---HHH
Q 047157          645 LLNKDQT--RTDTNMRGTMGYVAPEWLR-NVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSD---WVI  718 (788)
Q Consensus       645 ~~~~~~~--~~~~~~~gt~~y~aPE~~~-~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~---~~~  718 (788)
                      .......  .......||+.|+|||++. ...++.++||||+||++|||++|+.||......+...........   ...
T Consensus       158 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  237 (345)
T d1pmea_         158 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL  237 (345)
T ss_dssp             ECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred             eccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhh
Confidence            7644322  2234467899999999984 456789999999999999999999999765332111100000000   000


Q ss_pred             HHhhcccccccccCCC-CCcccH-----HHHHHHHHHHhHccCCCCCCCCCHHHHHHH--hhcCc
Q 047157          719 SCMLSRNLQVLVSHDP-EVLSDL-----ERFERMAMVGLWCNHPDPNLRPSMKKVIHM--LEGTL  775 (788)
Q Consensus       719 ~~~~~~~~~~l~~~~~-~~~~~~-----~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~~~  775 (788)
                      ...............+ ....+.     ....++.+|+.+||+.||++|||++|++++  |+...
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~  302 (345)
T d1pmea_         238 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY  302 (345)
T ss_dssp             HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             hhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCC
Confidence            0000000000000000 000000     112467899999999999999999999985  55443

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-40  Score=352.00  Aligned_cols=264  Identities=19%  Similarity=0.229  Sum_probs=194.3

Q ss_pred             HhhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEec-------
Q 047157          488 ATKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSE-------  558 (788)
Q Consensus       488 ~t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------  558 (788)
                      ..|.+.++||+|+||+||+|++.  .+++.||||++....  ....+++.+|+++|++++||||+++++++..       
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~--~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~   87 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHR--KTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR   87 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET--TTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-------
T ss_pred             CCEEEEEEEecCcCeEEEEEEEC--CCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccc
Confidence            35677899999999999999886  677899999985432  3345678899999999999999999998855       


Q ss_pred             -CCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEE
Q 047157          559 -EDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKI  637 (788)
Q Consensus       559 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL  637 (788)
                       .+..++||||+.++.+... ......++...+..++.||+.||.|||++   +|+||||||+|||++     .++.+||
T Consensus        88 ~~~~~~iv~e~~~~~~~~~~-~~~~~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~-----~~~~~kl  158 (318)
T d3blha1          88 CKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLIT-----RDGVLKL  158 (318)
T ss_dssp             ---CEEEEEECCCEEHHHHH-TCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEC-----TTSCEEE
T ss_pred             cCceEEEEEeccCCCccchh-hhcccccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeec-----CCCcEEe
Confidence             3468999999987666544 45556788999999999999999999999   999999999999998     7889999


Q ss_pred             eecCCccccCCCCCc---ccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhh
Q 047157          638 SDFGISKLLNKDQTR---TDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVL  713 (788)
Q Consensus       638 ~Dfg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~  713 (788)
                      +|||++.........   ......||+.|+|||.+.+. .+++++||||+||++|||++|+.||..........      
T Consensus       159 ~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~------  232 (318)
T d3blha1         159 ADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA------  232 (318)
T ss_dssp             CCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH------
T ss_pred             eecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHH------
Confidence            999999876533221   22335799999999998755 68999999999999999999999997543221110      


Q ss_pred             HHHHHHHhhcc--c---------ccccccCCCCCccc-------HHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          714 SDWVISCMLSR--N---------LQVLVSHDPEVLSD-------LERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       714 ~~~~~~~~~~~--~---------~~~l~~~~~~~~~~-------~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                        .........  .         ....+.........       ......+++|+.+||+.||++|||++|++++
T Consensus       233 --~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         233 --LISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             --HHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             --HHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence              010100000  0         00000000000111       1123467789999999999999999999975

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-40  Score=351.04  Aligned_cols=254  Identities=27%  Similarity=0.301  Sum_probs=202.4

Q ss_pred             hhcccccccccccceEEEEEEec-cCcceeeeeeecccch----HHHHHHHHHHHHHhcCCCc-cccceEeeEEecCCeE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRL-KDTQIEIAVKKLEKDI----EKTNEEFMTELKIIGRTHH-KNLVRLLGFCSEEDKR  562 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~  562 (788)
                      .|.+.+.||+|+||+||+|.... ..+++.||||.+.+..    ....+.+.+|++++++++| |||+++++++.+....
T Consensus        25 ~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~  104 (322)
T d1vzoa_          25 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKL  104 (322)
T ss_dssp             GEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEE
T ss_pred             ceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCce
Confidence            37888999999999999998753 3467899999986432    2334578899999999966 8999999999999999


Q ss_pred             EEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCC
Q 047157          563 LLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGI  642 (788)
Q Consensus       563 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~  642 (788)
                      ++||||+.+++|.+++... ..+.+..+..++.||+.||.|||++   +|+||||||+|||++     .++.+||+|||+
T Consensus       105 ~~v~e~~~~~~L~~~i~~~-~~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~-----~~~~vkL~DFG~  175 (322)
T d1vzoa_         105 HLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLD-----SNGHVVLTDFGL  175 (322)
T ss_dssp             EEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC-----TTSCEEESCSSE
T ss_pred             eeeeecccccHHHHHHHhc-ccccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeec-----CCCCEEEeeccc
Confidence            9999999999999999665 4567788889999999999999999   999999999999998     778999999999


Q ss_pred             ccccCCCCCcccccccCCccccCcccccCC--CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHH
Q 047157          643 SKLLNKDQTRTDTNMRGTMGYVAPEWLRNV--PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISC  720 (788)
Q Consensus       643 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  720 (788)
                      ++.+............|++.|+|||.+.+.  .++.++|||||||+||||++|+.||......+....        ....
T Consensus       176 a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~--------i~~~  247 (322)
T d1vzoa_         176 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAE--------ISRR  247 (322)
T ss_dssp             EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHH--------HHHH
T ss_pred             hhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH--------HHHh
Confidence            987755544444556799999999998654  478899999999999999999999976543322111        1111


Q ss_pred             hhcccccccccCCCCCcccHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 047157          721 MLSRNLQVLVSHDPEVLSDLERFERMAMVGLWCNHPDPNLRP-----SMKKVIH  769 (788)
Q Consensus       721 ~~~~~~~~l~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~  769 (788)
                      ....        .+..  +....+++.+++.+||+.||++||     |++|+++
T Consensus       248 ~~~~--------~~~~--~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         248 ILKS--------EPPY--PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             HHHC--------CCCC--CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             cccC--------CCCC--cccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            1111        1111  112356788899999999999999     5899986

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-40  Score=345.36  Aligned_cols=263  Identities=20%  Similarity=0.234  Sum_probs=201.1

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccc--hHHHHHHHHHHHHHhcCCCccccceEeeEEecCCeEEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKD--IEKTNEEFMTELKIIGRTHHKNLVRLLGFCSEEDKRLLVY  566 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lV~  566 (788)
                      .|++.++||+|+||+||+|++.  .++..||||+++..  .....+++.+|+.+++.++||||+++++++.+....++|+
T Consensus         3 ry~~i~~LG~G~fg~V~~~~~~--~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~   80 (292)
T d1unla_           3 KYEKLEKIGEGTYGTVFKAKNR--ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF   80 (292)
T ss_dssp             SEEEEEEEEECSSSEEEEEEET--TTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEeeeEEecCcCeEEEEEEEC--CCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEe
Confidence            3667799999999999999987  67779999998543  2445678999999999999999999999999999999999


Q ss_pred             ecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcccc
Q 047157          567 ELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKLL  646 (788)
Q Consensus       567 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~~  646 (788)
                      |++.+++|..++. ....+++..+..++.|++.||+|||++   +|+||||||+|||++     .++.+||+|||.+...
T Consensus        81 ~~~~~~~l~~~~~-~~~~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~-----~~~~~kl~DFG~a~~~  151 (292)
T d1unla_          81 EFCDQDLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLIN-----RNGELKLANFGLARAF  151 (292)
T ss_dssp             ECCSEEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEC-----TTCCEEECCCTTCEEC
T ss_pred             eeccccccccccc-cccccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccc-----cCCceeeeecchhhcc
Confidence            9999988887764 446788999999999999999999999   999999999999998     7789999999999876


Q ss_pred             CCCCCcccccccCCccccCcccccCCC-CCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhHHHHHHHhhcc-
Q 047157          647 NKDQTRTDTNMRGTMGYVAPEWLRNVP-VTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLSDWVISCMLSR-  724 (788)
Q Consensus       647 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  724 (788)
                      ...... .....++..|+|||.+.... ++.++|||||||++|||++|+.||.........      . .......... 
T Consensus       152 ~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~------~-~~~~~~~~~~~  223 (292)
T d1unla_         152 GIPVRC-YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ------L-KRIFRLLGTPT  223 (292)
T ss_dssp             CSCCSC-CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHH------H-HHHHHHHCCCC
T ss_pred             cCCCcc-ceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHH------H-HHHHhhcCCCC
Confidence            544332 22345788899999987655 689999999999999999999997543211100      0 0010100000 


Q ss_pred             --cccc---cc---------cCCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          725 --NLQV---LV---------SHDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       725 --~~~~---l~---------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                        ....   ..         .............+.+.+|+.+||+.||++|||++||+++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H  283 (292)
T d1unla_         224 EEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             TTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             hhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence              0000   00         0000000111234567889999999999999999999873

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.8e-39  Score=347.08  Aligned_cols=263  Identities=17%  Similarity=0.215  Sum_probs=196.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC-ccccceEeeEEec--CCeEEEE
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVRLLGFCSE--EDKRLLV  565 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~--~~~~~lV  565 (788)
                      .|.+.++||+|+||+||+|+..  .+++.||||+++...   .+++.+|+++|++++ ||||+++++++..  ....++|
T Consensus        36 ~y~i~~~LG~G~fg~V~~a~~~--~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v  110 (328)
T d3bqca1          36 DYQLVRKLGRGKYSEVFEAINI--TNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  110 (328)
T ss_dssp             GEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEE
T ss_pred             CeEEEEEEecCcCeEEEEEEEC--CCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEE
Confidence            5788899999999999999886  678899999987542   457889999999995 9999999999874  4568999


Q ss_pred             EecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCccc
Q 047157          566 YELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISKL  645 (788)
Q Consensus       566 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~~  645 (788)
                      |||+++++|..+.    +.+++..+..++.||+.||.|||++   +|+||||||+|||++.    ++..+||+|||++..
T Consensus       111 ~e~~~~~~L~~~~----~~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~----~~~~vkl~DFG~a~~  179 (328)
T d3bqca1         111 FEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDH----EHRKLRLIDWGLAEF  179 (328)
T ss_dssp             EECCCSCBGGGTT----TSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEET----TTTEEEECCGGGCEE
T ss_pred             EeecCCCcHHHHh----cCCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcC----CCCeeeeccccccee
Confidence            9999999998764    4689999999999999999999999   9999999999999982    344699999999987


Q ss_pred             cCCCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccc-cchhhh-HHHHHHHhh
Q 047157          646 LNKDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESE-EVDIVL-SDWVISCML  722 (788)
Q Consensus       646 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~-~~~~~~-~~~~~~~~~  722 (788)
                      ......  .....+|+.|+|||.+.+. .++.++||||+|+++|||++|+.||.......... .....+ .........
T Consensus       180 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~  257 (328)
T d3bqca1         180 YHPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID  257 (328)
T ss_dssp             CCTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             ccCCCc--ccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhh
Confidence            654332  2345789999999998765 57999999999999999999999997543221100 000000 000000000


Q ss_pred             c------ccccccccCCC--------CCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 047157          723 S------RNLQVLVSHDP--------EVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIH  769 (788)
Q Consensus       723 ~------~~~~~l~~~~~--------~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~  769 (788)
                      .      ...........        .........+++.+|+.+||+.||++|||++|+++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         258 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             HTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0      00011110000        00111223456889999999999999999999986

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-39  Score=348.72  Aligned_cols=265  Identities=21%  Similarity=0.234  Sum_probs=189.7

Q ss_pred             hcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEec------CCe
Q 047157          490 KGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSE------EDK  561 (788)
Q Consensus       490 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~~  561 (788)
                      |.+.++||+|+||+||+|.+.  .++..||||++....  ....+++.+|+.++++++||||+++++++..      ...
T Consensus        19 Y~i~~~LG~G~fg~V~~~~d~--~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          19 YQNLKPIGSGAQGIVCAAYDA--VLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             EEEEEECSCC--CEEEEEEET--TTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             eEEEEEeecCcCeEEEEEEEC--CCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            666789999999999999886  678899999997543  4445678999999999999999999999853      468


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      .|+||||+.++.+. .+   ...+++..+..++.||+.||.|||++   +|+||||||+|||++     .++.+|++|||
T Consensus        97 ~~iv~Ey~~~~l~~-~~---~~~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~-----~~~~~kl~df~  164 (355)
T d2b1pa1          97 VYLVMELMDANLCQ-VI---QMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVK-----SDCTLKILDFG  164 (355)
T ss_dssp             EEEEEECCSEEHHH-HH---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEC-----TTCCEEECCCC
T ss_pred             eEEEEeccchHHHH-hh---hcCCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccc-----cccceeeechh
Confidence            89999999765554 43   24688999999999999999999999   999999999999998     78899999999


Q ss_pred             CccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchh----------
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI----------  711 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~----------  711 (788)
                      +++......  ......+|+.|+|||++.+..+++++||||+||++|||++|+.||...+..........          
T Consensus       165 ~~~~~~~~~--~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~  242 (355)
T d2b1pa1         165 LARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM  242 (355)
T ss_dssp             C-----------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred             hhhcccccc--ccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHH
Confidence            988654432  22345789999999999999999999999999999999999999975532211100000          


Q ss_pred             -hhHHHHHHHhhccc------cccccc---CCCCCcccHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 047157          712 -VLSDWVISCMLSRN------LQVLVS---HDPEVLSDLERFERMAMVGLWCNHPDPNLRPSMKKVIHM  770 (788)
Q Consensus       712 -~~~~~~~~~~~~~~------~~~l~~---~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~  770 (788)
                       ..............      ......   ..............+.+|+.+||+.||++|||++||+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             TTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence             00000000000000      000000   011111233456788999999999999999999999964

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-39  Score=345.80  Aligned_cols=272  Identities=20%  Similarity=0.253  Sum_probs=195.6

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccch--HHHHHHHHHHHHHhcCCCccccceEeeEEecC-----Ce
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI--EKTNEEFMTELKIIGRTHHKNLVRLLGFCSEE-----DK  561 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~  561 (788)
                      .|.+.++||+|+||+||+|+..  .+++.||||++++..  ....+++.+|+++|++++||||+++++++...     ..
T Consensus        19 rY~i~~~LG~G~fg~Vy~a~~~--~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          19 RYQNLSPVGSGAYGSVCAAFDT--KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             TEEEEEECGGGTTSSEEEEEET--TTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CeEEEEEEecCCCeEEEEEEEC--CCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            3667799999999999999886  678899999997543  34456789999999999999999999998643     34


Q ss_pred             EEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCCCcEEEeecC
Q 047157          562 RLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFG  641 (788)
Q Consensus       562 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg  641 (788)
                      .+++++++.+|+|.+++..  +.+++..+..++.||+.||+|||++   +|+||||||+|||++     .++.+|++|||
T Consensus        97 ~~~i~~~~~gg~L~~~~~~--~~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~-----~~~~~kl~dfg  166 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVN-----EDCELKILDFG  166 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC-----TTCCEEECCC-
T ss_pred             eEEEEEeecCCchhhhccc--ccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCcccccc-----ccccccccccc
Confidence            4667778889999999854  4689999999999999999999999   999999999999998     78899999999


Q ss_pred             CccccCCCCCcccccccCCccccCcccccCC-CCCccCcchhhHHHHHHHHhCCCCCCccccccccccchhhhH---HHH
Q 047157          642 ISKLLNKDQTRTDTNMRGTMGYVAPEWLRNV-PVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDIVLS---DWV  717 (788)
Q Consensus       642 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~---~~~  717 (788)
                      .+.....    ......|++.|+|||.+.+. .++.++|||||||++|+|++|+.||...+.............   ...
T Consensus       167 ~a~~~~~----~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~  242 (348)
T d2gfsa1         167 LARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL  242 (348)
T ss_dssp             ---CCTG----GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred             hhcccCc----ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHH
Confidence            9976532    22345788999999987665 568999999999999999999999976533221110000000   000


Q ss_pred             HHHhhccccccccc---CCCCCcc---cHHHHHHHHHHHhHccCCCCCCCCCHHHHHH--HhhcCcC
Q 047157          718 ISCMLSRNLQVLVS---HDPEVLS---DLERFERMAMVGLWCNHPDPNLRPSMKKVIH--MLEGTLE  776 (788)
Q Consensus       718 ~~~~~~~~~~~l~~---~~~~~~~---~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~--~L~~~~~  776 (788)
                      ..............   ..+....   .....+.+.+|+.+||+.||++|||++|+++  .+.+...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~  309 (348)
T d2gfsa1         243 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD  309 (348)
T ss_dssp             HTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             hhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCC
Confidence            00000000000000   0000000   0112356788999999999999999999998  4655443

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.5e-35  Score=316.78  Aligned_cols=284  Identities=21%  Similarity=0.229  Sum_probs=195.7

Q ss_pred             hhcccccccccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC-----------ccccceEeeEEe
Q 047157          489 TKGFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-----------HKNLVRLLGFCS  557 (788)
Q Consensus       489 t~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----------hpniv~~~~~~~  557 (788)
                      .|.+.++||+|+||+||+|+..  .+++.||||++++.. ...+.+.+|+.++++++           |+||+++++++.
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~--~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~   90 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDM--VNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   90 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEEC--CCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEee
Confidence            4788899999999999999886  678899999997653 33457778888887765           578999998875


Q ss_pred             c--CCeEEEEEecCCCCCHhHh--hhccCCCCCHHHHHHHHHHHHHHHHHhhh-ccCCceEecCCCCCcEEeccCCC-CC
Q 047157          558 E--EDKRLLVYELMPNGTLSNF--LFHEGQRPGWVQRVEIALGVARGLLYLHE-ECETQIIHCDIKPQNVLLDLKTL-DT  631 (788)
Q Consensus       558 ~--~~~~~lV~e~~~~gsL~~~--l~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~~ivH~dlkp~NIll~~~~~-~~  631 (788)
                      .  ....+++++++..+.....  .......+++..+..++.||+.||+|||+ .   +|+||||||+|||++..+. ..
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~---~IvHrDlKp~NIll~~~~~~~~  167 (362)
T d1q8ya_          91 HKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPEN  167 (362)
T ss_dssp             EEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CEECSCCSGGGEEEEEEETTTT
T ss_pred             eccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc---CcccccCChhHeeeeccCcccc
Confidence            4  4566677776655443222  23345677899999999999999999998 6   8999999999999974321 11


Q ss_pred             CCcEEEeecCCccccCCCCCcccccccCCccccCcccccCCCCCccCcchhhHHHHHHHHhCCCCCCccccccccccchh
Q 047157          632 NYMAKISDFGISKLLNKDQTRTDTNMRGTMGYVAPEWLRNVPVTTKVDVFSFGVMLLEIICGRRHIELSRVEEESEEVDI  711 (788)
Q Consensus       632 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~k~DVwSlGvil~elltg~~p~~~~~~~~~~~~~~~  711 (788)
                      ...++|+|||.+.......    ....||+.|+|||.+....++.++||||+||+++||++|+.||..............
T Consensus       168 ~~~~kl~dfg~s~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~  243 (362)
T d1q8ya_         168 LIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH  243 (362)
T ss_dssp             EEEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred             cceeeEeeccccccccccc----ccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHH
Confidence            2359999999998654322    345789999999999999999999999999999999999999975433211111100


Q ss_pred             hhHHHHHHH-------h----------hcc-cccccccCC---------CCCcccHHHHHHHHHHHhHccCCCCCCCCCH
Q 047157          712 VLSDWVISC-------M----------LSR-NLQVLVSHD---------PEVLSDLERFERMAMVGLWCNHPDPNLRPSM  764 (788)
Q Consensus       712 ~~~~~~~~~-------~----------~~~-~~~~l~~~~---------~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~  764 (788)
                       +.......       .          ... .........         ............+.+|+.+||+.||++|||+
T Consensus       244 -~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta  322 (362)
T d1q8ya_         244 -IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA  322 (362)
T ss_dssp             -HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred             -HHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCH
Confidence             00000000       0          000 000000000         0111234566789999999999999999999


Q ss_pred             HHHHHH--hhcCc---CCCCCCCC
Q 047157          765 KKVIHM--LEGTL---EVGMPPLL  783 (788)
Q Consensus       765 ~evl~~--L~~~~---~~~~pp~p  783 (788)
                      +|++++  +++..   ++..|+.+
T Consensus       323 ~e~L~Hp~f~~~~~~~~~~~p~~~  346 (362)
T d1q8ya_         323 GGLVNHPWLKDTLGMEEIRVPDRE  346 (362)
T ss_dssp             HHHHTCGGGTTCTTCTTCCCTTSC
T ss_pred             HHHhcCcccCCCCCcccCCCCCcc
Confidence            999985  65443   34444433

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.82  E-value=8e-21  Score=184.70  Aligned_cols=163  Identities=17%  Similarity=0.134  Sum_probs=119.0

Q ss_pred             cccccccccccceEEEEEEeccCcceeeeeeecccch------------------HHHHHHHHHHHHHhcCCCccccceE
Q 047157          491 GFSKLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI------------------EKTNEEFMTELKIIGRTHHKNLVRL  552 (788)
Q Consensus       491 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~------------------~~~~~~~~~E~~~l~~l~hpniv~~  552 (788)
                      .+.++||+|+||+||+|...   ++..||||.++...                  ......+.+|...+.++.|++++..
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~---~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~   79 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSE---KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKV   79 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEET---TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCE
T ss_pred             hhCCEeeeCcceEEEEEECC---CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceE
Confidence            45789999999999999873   56799999764211                  1122345678889999999999998


Q ss_pred             eeEEecCCeEEEEEecCCCCCHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhccCCceEecCCCCCcEEeccCCCCCC
Q 047157          553 LGFCSEEDKRLLVYELMPNGTLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEECETQIIHCDIKPQNVLLDLKTLDTN  632 (788)
Q Consensus       553 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~~ivH~dlkp~NIll~~~~~~~~  632 (788)
                      +++..    .+++|||+++..+.++        +......++.|++++|.|||++   +|+||||||+|||++     ++
T Consensus        80 ~~~~~----~~lvme~~~~~~~~~l--------~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~-----~~  139 (191)
T d1zara2          80 YAWEG----NAVLMELIDAKELYRV--------RVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-----EE  139 (191)
T ss_dssp             EEEET----TEEEEECCCCEEGGGC--------CCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-----TT
T ss_pred             EEecC----CEEEEEeeccccccch--------hhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeee-----CC
Confidence            87632    3799999988665432        2334467899999999999999   999999999999997     33


Q ss_pred             CcEEEeecCCccccCCCCCcccccccCCccccC------cccccCCCCCccCcchhhHHHH
Q 047157          633 YMAKISDFGISKLLNKDQTRTDTNMRGTMGYVA------PEWLRNVPVTTKVDVFSFGVML  687 (788)
Q Consensus       633 ~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~a------PE~~~~~~~s~k~DVwSlGvil  687 (788)
                       .++|+|||.+..........         |..      .|. ..+.++.++|+||..--+
T Consensus       140 -~~~liDFG~a~~~~~~~~~~---------~l~rd~~~~~~~-f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         140 -GIWIIDFPQSVEVGEEGWRE---------ILERDVRNIITY-FSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             -EEEECCCTTCEETTSTTHHH---------HHHHHHHHHHHH-HHHHHCCCCCHHHHHHHH
T ss_pred             -CEEEEECCCcccCCCCCcHH---------HHHHHHHHHHHH-HcCCCCCcccHHHHHHHH
Confidence             48999999997654332211         111      111 135778899999986443

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=99.71  E-value=1.7e-17  Score=144.92  Aligned_cols=108  Identities=19%  Similarity=0.346  Sum_probs=85.6

Q ss_pred             CCccCCCCceecCCCCeeecCCCeEEEeeeecCCCceEEEEEeCCCCCCeEEEEecCCCCCCCCcEEEEecCCceEEEeC
Q 047157           25 SPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYF  104 (788)
Q Consensus        25 ~~~i~~~~~l~~~~~~~~vS~~g~F~lGFf~~~~~~~y~giw~~~~~~~tvVWvANr~~p~~~~s~l~l~~~G~L~l~~~  104 (788)
                      +|+|.+||.|.++  ++|+  +|.|+|+|+..|+    |.+++    ..++||.||++.|. ..+.+.|..||+|+|.+.
T Consensus         1 tDtL~~gq~L~~g--~~l~--~g~~~l~~q~DGN----Lvly~----~~~~vW~s~~~~~~-~~~~l~l~~dGnLvl~~~   67 (112)
T d1xd5a_           1 SDRLNSGHQLDTG--GSLA--EGGYLFIIQNDCN----LVLYD----NNRAVWASGTNGKA-SGCVLKMQNDGNLVIYSG   67 (112)
T ss_dssp             CCEEETTEEECTT--CEEE--ETTEEEEECTTSC----EEEEE----TTEEEEECCCTTSC-SSEEEEECTTSCEEEEET
T ss_pred             CCEecCCCEecCC--CEEE--ECCEEEEEcCCCC----EEEEc----CCcEEEEccCccCC-CCcEEEEeccccEEEEec
Confidence            5889999999976  5787  4999999986654    44544    36899999998874 346899999999999986


Q ss_pred             CCcEEEEeccc----ccccccCCCCcEEEEecCCceeecccCCCCC
Q 047157          105 NGSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDSFDFPTD  146 (788)
Q Consensus       105 ~~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqSFD~PtD  146 (788)
                      ++ ..|++++.    ..+|+|+|+|||||++.++.++|||+.+|++
T Consensus        68 ~~-~~w~s~t~~~~~~~~l~L~ddGNlvly~~~~~~~W~S~t~~~n  112 (112)
T d1xd5a_          68 SR-AIWASNTNRQNGNYYLILQRDRNVVIYDNSNNAIWATHTNVGN  112 (112)
T ss_dssp             TE-EEEECCCCCSCCCCEEEECTTSCEEEECTTSCEEEECCCCCCC
T ss_pred             CC-eEEEEeeccCCCceEEEEcCCCCEEEECCCCcEEecCCCccCC
Confidence            43 33332221    2478999999999999999999999999985

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.62  E-value=6.4e-16  Score=133.36  Aligned_cols=103  Identities=21%  Similarity=0.339  Sum_probs=81.9

Q ss_pred             CccCCCCceecCCCCeeecCCCeEEEeeeecCCCceEEEEEeCCCCCCeEEEEecCCCCCCCCcEEEEecCCceEEEeCC
Q 047157           26 PNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFN  105 (788)
Q Consensus        26 ~~i~~~~~l~~~~~~~~vS~~g~F~lGFf~~~~~~~y~giw~~~~~~~tvVWvANr~~p~~~~s~l~l~~~G~L~l~~~~  105 (788)
                      ++|.+|+.|.++  ++|+  +|.|.|+|...++    |.++.    ..++||+||++.|...++.|.|..||+|+|.|.+
T Consensus         2 ~~L~~g~~L~~g--~~l~--~g~~~l~~q~dgn----Lvl~~----~~~~vW~ant~~~~~~~~~l~l~~dGnLvl~~~~   69 (109)
T d1kj1a_           2 NLLTNGEGLYAG--QSLD--VEPYHFIMQEDCN----LVLYD----HSTSVWASNTGILGKKGCKAVLQSDGNFVVYDAE   69 (109)
T ss_dssp             CEEETTCEEETT--CEEE--ETTEEEEECTTSC----EEEEE----TTEEEEECCCCCTTCCCCEEEECTTSCEEEECSS
T ss_pred             CCccCCCEEeCC--CEEE--eCCEEEEecCCCe----EEEEe----CCEEEEEeCCCCCCceeEEEEEcCCceEEEEeCC
Confidence            578899999976  5676  5889999976544    33432    3689999999999988899999999999999999


Q ss_pred             CcEEEEeccc----ccccccCCCCcEEEEecCCceeecccCC
Q 047157          106 GSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDSFDF  143 (788)
Q Consensus       106 ~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqSFD~  143 (788)
                      |++.|...++    ..+|+|+|+|||||+++   .+|||+-|
T Consensus        70 g~~vW~s~t~~~~~~~~l~L~ddGNlvly~~---~~W~S~t~  108 (109)
T d1kj1a_          70 GRSLWASHSVRGNGNYVLVLQEDGNVVIYGS---DIWSTGTY  108 (109)
T ss_dssp             SCEEEECCCCCCSSCCEEEECTTSCEEEECC---EEEECCCC
T ss_pred             CcEEEEEeeECCCCCEEEEEeCCCcEEEECC---CEecCCCc
Confidence            9876544332    23689999999999964   69999854

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=99.59  E-value=1.6e-15  Score=130.76  Aligned_cols=102  Identities=16%  Similarity=0.251  Sum_probs=80.4

Q ss_pred             CccCCCCceecCCCCeeecCCCeEEEeeeecCCCceEEEEEeCCCCCCeEEEEecCCCCCCCCcEEEEecCCceEEEeCC
Q 047157           26 PNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFN  105 (788)
Q Consensus        26 ~~i~~~~~l~~~~~~~~vS~~g~F~lGFf~~~~~~~y~giw~~~~~~~tvVWvANr~~p~~~~s~l~l~~~G~L~l~~~~  105 (788)
                      ++|.+||.|.++  ++|+  +|.|.|.|+..|+    |.||.    ..++||.||++.|- ..+.+.+..+|+|+|.+.+
T Consensus         2 ~~L~~g~~L~~G--~~l~--ng~~~l~~q~DGN----Lvly~----~~~~vW~s~~~~~~-~~~~l~l~~~Gnlvl~~~~   68 (108)
T d1jpca_           2 NILYSGETLSTG--EFLN--YGSFVFIMQEDCN----LVLYD----VDKPIWATNTGGLS-RSCFLSMQTDGNLVVYNPS   68 (108)
T ss_dssp             CEEETTEEECTT--CEEE--ETTEEEEECTTSC----EEEEE----TTEEEEECCCTTSC-SSCEEEECTTSCEEEECTT
T ss_pred             CCccCCCEecCC--CEEE--cCCEEEEECCCCe----EEEEe----CCceeeEeCCCCCC-CccEEEEeccceEEEECCC
Confidence            568889999865  5674  6999999987765    55654    36889999998873 3568999999999999999


Q ss_pred             CcEEEEeccc----ccccccCCCCcEEEEecCCceeecccCC
Q 047157          106 GSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDSFDF  143 (788)
Q Consensus       106 ~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqSFD~  143 (788)
                      |+..|...+.    ..+|+|+|+|||||++.   .+||||+|
T Consensus        69 g~~vWsS~t~~~~~~~~l~L~ddGNlVly~~---~~W~S~t~  107 (108)
T d1jpca_          69 NKPIWASNTGGQNGNYVCILQKDRNVVIYGT---DRWATGTH  107 (108)
T ss_dssp             CCEEEECCCCCSCSCEEEEECTTSCEEEEEC---CCCCCCCC
T ss_pred             ccceEEccccCCCCcEEEEEcCCCCEEEeCC---CcccCCCC
Confidence            9876544332    23689999999999964   58999987

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.58  E-value=1.2e-15  Score=133.75  Aligned_cols=98  Identities=17%  Similarity=0.262  Sum_probs=78.4

Q ss_pred             EEEeCCCCCCeEEEEecCCCCCCCCc-EEEEecCCceEEEeCCCcEEEEecc----cccccccCCCCcEEEEecCCceee
Q 047157           64 GIWFDKIPEKTLVWAADRDSPAEAGS-KITLTNDGKLLLTYFNGSVQQIYSG----AASLALMQNDGNFVLKNANSAVVW  138 (788)
Q Consensus        64 giw~~~~~~~tvVWvANr~~p~~~~s-~l~l~~~G~L~l~~~~~~~~~~~s~----~~~~a~LldsGNlVl~~~~~~~lW  138 (788)
                      -|||.++++++++|++|++.|+..+. +|.+..||||+|.+.++ ..|.+.+    ....+.|+++|||||++.++.++|
T Consensus        11 ~il~~~~~~~~~~~~l~~~q~l~~g~y~L~~q~DGNLvL~~~~~-~vW~s~t~~~~~~~~~~l~~~GnLvl~d~~~~~lW   89 (120)
T d1dlpa2          11 SILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDRDD-RVWSTNTAGKGTGCRAVLQPNGRMDVLTNQNIAVW   89 (120)
T ss_dssp             EECCCC--CCCCCCEECSSCCCBCSSCEEEEETTTEEEEEBTTB-CCSCCCCCSSCSSCEEEEETTTEEEEEETTTEEEE
T ss_pred             eEEEcCCCCCCcccEEcCCCeeEcCCEEEEEcCCCcEEEecCCc-EEEEEccccCCCcEEEEEeCCeeEEEEcCCCCEEE
Confidence            48999999999999999999996554 89999999999998644 3222222    124689999999999999999999


Q ss_pred             cccCCCCCcccCCccccCCCeEEeecCCCCCCCCCceEEeeccCCcceee
Q 047157          139 DSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLS  188 (788)
Q Consensus       139 qSFD~PtDtllpg~~l~~g~~l~s~~~~~~dps~G~~~~~~~~~g~~~~~  188 (788)
                      |||.                          +.++|.|.+.|++||++.++
T Consensus        90 ~S~t--------------------------~~~~~~~~l~Lq~DGnlvlY  113 (120)
T d1dlpa2          90 TSGN--------------------------SRSAGRYVFVLQPDRNLAIY  113 (120)
T ss_dssp             ECCC--------------------------CCSSSCCEEEECSSSCEEEE
T ss_pred             EeCC--------------------------CCCCCcEEEEECCCCcEEEe
Confidence            9973                          23568899999999998875

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.41  E-value=5.8e-14  Score=121.54  Aligned_cols=106  Identities=27%  Similarity=0.382  Sum_probs=85.4

Q ss_pred             EEeCCCCCCeEEEEecCCCCCCCCc-EEEEecCCceEEEeCCCcEEEEecc---cccccccCCCCcEEEEecCCceeecc
Q 047157           65 IWFDKIPEKTLVWAADRDSPAEAGS-KITLTNDGKLLLTYFNGSVQQIYSG---AASLALMQNDGNFVLKNANSAVVWDS  140 (788)
Q Consensus        65 iw~~~~~~~tvVWvANr~~p~~~~s-~l~l~~~G~L~l~~~~~~~~~~~s~---~~~~a~LldsGNlVl~~~~~~~lWqS  140 (788)
                      |||.-.+..+..|+.+.+.++.++. +|.+..||||||.+. +.+.|...+   ....+.|+++|||||++.++.++|||
T Consensus         3 ~~~~~~~~~~~~~tl~~~~~l~~g~~~l~~q~DGNLvL~~~-~~~vW~s~t~~~~~~~l~l~~dGNLvl~d~~~~~vWsS   81 (115)
T d1dlpa1           3 ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFDS-DVRVWASNTAGATGCRAVLQSDGLLVILTAQNTIRWSS   81 (115)
T ss_dssp             CCBCSSSSSCSCSCCCTTCEECSTTEEEEECTTSCEEEEES-SSEEECCCCCSCSCCBCCBCSSSCBCCBCTTTCCSCCC
T ss_pred             EEEecCCCCCCcceecCCCcEEcCCEEEEECCCCeEEEEcC-CeeEEEcccCCCCceEEEEeccCCEEEEccCCCEEEEc
Confidence            7888778888889999999997655 899999999999884 444443322   24678999999999999999999998


Q ss_pred             cCCCCCcccCCccccCCCeEEeecCCCCCCCCCceEEeeccCCcceeeecccCCCCCcccCc
Q 047157          141 FDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGT  202 (788)
Q Consensus       141 FD~PtDtllpg~~l~~g~~l~s~~~~~~dps~G~~~~~~~~~g~~~~~~~~~~~~~yw~~~~  202 (788)
                      +-                          +.++|.|.+.|++||++.++     ..++|.+++
T Consensus        82 ~t--------------------------~~~~g~y~l~Lq~DGNlvlY-----~~~~Wssgt  112 (115)
T d1dlpa1          82 GT--------------------------KGSIGNYVLVLQPDRTVTIY-----GPGLWDSGT  112 (115)
T ss_dssp             CC--------------------------CCCSSCCEEEECSSSCEEEE-----CSEEEECSC
T ss_pred             CC--------------------------CCCCCCEEEEECCCCcEEEe-----CCCeecCCC
Confidence            63                          34579999999999998764     346898875

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.15  E-value=5.3e-11  Score=103.37  Aligned_cols=99  Identities=18%  Similarity=0.279  Sum_probs=73.6

Q ss_pred             CccCCCCceecCCCCeeecCCCeEEEeeeecCCCceEEEEEeCCCCCCeEEEEecCCCCCCCCcEEEEecCCceEEEeCC
Q 047157           26 PNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLTYFN  105 (788)
Q Consensus        26 ~~i~~~~~l~~~~~~~~vS~~g~F~lGFf~~~~~~~y~giw~~~~~~~tvVWvANr~~p~~~~s~l~l~~~G~L~l~~~~  105 (788)
                      .++..+|+|.      .++..|.|.|.|...|+    |-+ |+   ..++||.||+..+.. .+.|.|..||+|+|.|.+
T Consensus        15 ~~l~~~q~l~------~~~~~~~y~l~mQ~DGN----LVL-y~---~~~~vWssnt~~~~~-~~~l~l~~dGnLvL~d~~   79 (119)
T d1b2pa_          15 QILHATESLE------ILFGTHVYRFIMQTDCN----LVL-YD---NNNPIWATNTGGLGN-GCRAVLQPDGVLVVITNE   79 (119)
T ss_dssp             CEEETTCEEE------EEETTEEEEEEECTTSC----EEE-EE---TTEEEEECCCTTSCS-SCEEEECTTSCEEEECTT
T ss_pred             CEEeCCCeEE------EecCCceEEEEECCCCc----EEE-EE---CCeEEEEecCCCCCc-ceEEEEEeCCCEEEECCC
Confidence            4566666553      47789999999877655    222 33   368999999987643 468999999999999999


Q ss_pred             CcEEEEeccc----ccccccCCCCcEEEEecCCceeecccC
Q 047157          106 GSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDSFD  142 (788)
Q Consensus       106 ~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqSFD  142 (788)
                      |...|...+.    ..+++|+|+|||||++   ..+|||-.
T Consensus        80 g~~vWsS~t~~~~~~~~l~Lq~DGNlvlYg---~~~W~S~T  117 (119)
T d1b2pa_          80 NVTVWQSPVAGKAGHYVLVLQPDRNVVIYG---DALWATQT  117 (119)
T ss_dssp             CCEEEECSCCCCSSCEEEEECTTSCEEEEE---SEEEECCC
T ss_pred             CcEEEECCCcCCCCceEEEEcCCCCEEEEC---CCEeccCC
Confidence            9875543332    2358899999999995   47999964

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=98.78  E-value=1.4e-09  Score=93.50  Aligned_cols=96  Identities=19%  Similarity=0.320  Sum_probs=66.9

Q ss_pred             cCCCccCCCCceecCCCCeeecCCCeEEEeeeecCCCceEEEEEeCCCCCCeEEEEecCCCCCCCCcEEEEecCCceEEE
Q 047157           23 QTSPNISLGSSITAGSNTSWLSPSGDFAFGFYSLFGGLYLLGIWFDKIPEKTLVWAADRDSPAEAGSKITLTNDGKLLLT  102 (788)
Q Consensus        23 ~~~~~i~~~~~l~~~~~~~~vS~~g~F~lGFf~~~~~~~y~giw~~~~~~~tvVWvANr~~p~~~~s~l~l~~~G~L~l~  102 (788)
                      ....++..+++|.          +|.|.|.|...|+    |.++.    ..++||.+|...  ...+.+.|..+|||||.
T Consensus        12 ~~~~tl~~~~~l~----------~g~~~l~~q~DGN----LvL~~----~~~~vW~s~t~~--~~~~~l~l~~dGNLvl~   71 (115)
T d1dlpa1          12 SHPQTLHAAQSLE----------LSSFRFTMQSDCN----LVLFD----SDVRVWASNTAG--ATGCRAVLQSDGLLVIL   71 (115)
T ss_dssp             CSCSCCCTTCEEC----------STTEEEEECTTSC----EEEEE----SSSEEECCCCCS--CSCCBCCBCSSSCBCCB
T ss_pred             CCcceecCCCcEE----------cCCEEEEECCCCe----EEEEc----CCeeEEEcccCC--CCceEEEEeccCCEEEE
Confidence            3334566666553          4679998876655    44543    357899999754  34568899999999999


Q ss_pred             eCCCcEEEEeccc----ccccccCCCCcEEEEecCCceeeccc
Q 047157          103 YFNGSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDSF  141 (788)
Q Consensus       103 ~~~~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqSF  141 (788)
                      |.++++.|...++    .-+++|+++|||||++   ..+|+|-
T Consensus        72 d~~~~~vWsS~t~~~~g~y~l~Lq~DGNlvlY~---~~~Wssg  111 (115)
T d1dlpa1          72 TAQNTIRWSSGTKGSIGNYVLVLQPDRTVTIYG---PGLWDSG  111 (115)
T ss_dssp             CTTTCCSCCCCCCCCSSCCEEEECSSSCEEEEC---SEEEECS
T ss_pred             ccCCCEEEEcCCCCCCCCEEEEECCCCcEEEeC---CCeecCC
Confidence            9888763322222    1258899999999995   4799984

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=98.71  E-value=1.1e-08  Score=88.71  Aligned_cols=110  Identities=20%  Similarity=0.268  Sum_probs=73.8

Q ss_pred             cccCCCCcEEEEecCCceeecccCCCCCcccCCccccCCCeEEeecCCCCCCCCCceEEeeccCCcceeeecccCCCCCc
Q 047157          119 ALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYW  198 (788)
Q Consensus       119 a~LldsGNlVl~~~~~~~lWqSFD~PtDtllpg~~l~~g~~l~s~~~~~~dps~G~~~~~~~~~g~~~~~~~~~~~~~yw  198 (788)
                      ++++++||+|+.+.      +|+|.|++++.++|.|.                .|.|+|.|+.+|++.++  . ....+|
T Consensus         3 ~v~~~~~n~il~~~------~~~~~~~~~l~~~q~l~----------------~g~y~L~~q~DGNLvL~--~-~~~~vW   57 (120)
T d1dlpa2           3 VVVANNGNSILYST------QGNDNHPQTLHATQSLQ----------------LSPYRLSMETDCNLVLF--D-RDDRVW   57 (120)
T ss_dssp             CCCSSCCCEECCCC--------CCCCCCEECSSCCCB----------------CSSCEEEEETTTEEEEE--B-TTBCCS
T ss_pred             EEEEeCCCeEEEcC------CCCCCcccEEcCCCeeE----------------cCCEEEEEcCCCcEEEe--c-CCcEEE
Confidence            45666666666543      77899999999999874                37899999999998764  2 345688


Q ss_pred             ccCcccc-cceeeeeccceeEEEEecCCcceEEEEeeccCCCCceEEEEEEeCCccEEEE
Q 047157          199 YTGTVTL-NNVSLIFNQSAFMYLINSTGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQQF  257 (788)
Q Consensus       199 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~ld~~G~l~~~  257 (788)
                      .+..... ....+.+...|.+.+++.++..+...   ....... .+|++|+.||++++|
T Consensus        58 ~s~t~~~~~~~~~~l~~~GnLvl~d~~~~~lW~S---~t~~~~~-~~~l~Lq~DGnlvlY  113 (120)
T d1dlpa2          58 STNTAGKGTGCRAVLQPNGRMDVLTNQNIAVWTS---GNSRSAG-RYVFVLQPDRNLAIY  113 (120)
T ss_dssp             CCCCCSSCSSCEEEEETTTEEEEEETTTEEEEEC---CCCCSSS-CCEEEECSSSCEEEE
T ss_pred             EEccccCCCcEEEEEeCCeeEEEEcCCCCEEEEe---CCCCCCC-cEEEEECCCCcEEEe
Confidence            7765433 23456677778887777665433222   1111122 348999999999998

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=98.51  E-value=2.2e-07  Score=79.57  Aligned_cols=110  Identities=20%  Similarity=0.297  Sum_probs=76.0

Q ss_pred             CCcccCCccccCCCeEEeecCCCCCCCCCceEEeeccCCcceeeecccCCCCCcccCcccc-cceeeeeccceeEEEEec
Q 047157          145 TDTILPGQVLLTGKKLYSNSRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGTVTL-NNVSLIFNQSAFMYLINS  223 (788)
Q Consensus       145 tDtllpg~~l~~g~~l~s~~~~~~dps~G~~~~~~~~~g~~~~~~~~~~~~~yw~~~~~~~-~~~~~~~~~~~~~~~~~~  223 (788)
                      ||||+|||.|..|..+.+          |.|+|.|+.||++.++.   ....+|.++.... .+..+++...+.+.+++.
T Consensus         1 tDtL~~gq~L~~g~~l~~----------g~~~l~~q~DGNLvly~---~~~~vW~s~~~~~~~~~~l~l~~dGnLvl~~~   67 (112)
T d1xd5a_           1 SDRLNSGHQLDTGGSLAE----------GGYLFIIQNDCNLVLYD---NNRAVWASGTNGKASGCVLKMQNDGNLVIYSG   67 (112)
T ss_dssp             CCEEETTEEECTTCEEEE----------TTEEEEECTTSCEEEEE---TTEEEEECCCTTSCSSEEEEECTTSCEEEEET
T ss_pred             CCEecCCCEecCCCEEEE----------CCEEEEEcCCCCEEEEc---CCcEEEEccCccCCCCcEEEEeccccEEEEec
Confidence            799999999999999853          99999999999987643   3346887765442 334567777888877764


Q ss_pred             CCcceEEEEeeccCCCCceEEEEEEeCCccEEEEEeecCCCCceeEEeecccccc
Q 047157          224 TGDNIFRLTRNVMTPTEDYYHRATIDGHGNFQQFAYHKSTSSRWTRVWRAVNDPC  278 (788)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~rl~ld~~G~l~~~~w~~~~~~~W~~~~~~p~~~C  278 (788)
                      .. .+  .....  .......+++|+.||+|++|.-      .....|+...+.|
T Consensus        68 ~~-~~--w~s~t--~~~~~~~~l~L~ddGNlvly~~------~~~~~W~S~t~~~  111 (112)
T d1xd5a_          68 SR-AI--WASNT--NRQNGNYYLILQRDRNVVIYDN------SNNAIWATHTNVG  111 (112)
T ss_dssp             TE-EE--EECCC--CCSCCCCEEEECTTSCEEEECT------TSCEEEECCCCCC
T ss_pred             CC-eE--EEEee--ccCCCceEEEEcCCCCEEEECC------CCcEEecCCCccC
Confidence            32 12  22111  1222346899999999999831      2346788776655

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=98.50  E-value=1.5e-07  Score=81.08  Aligned_cols=81  Identities=27%  Similarity=0.393  Sum_probs=59.8

Q ss_pred             EEEEecCCceEEEeCCCcEEEEeccc----ccccccCCCCcEEEEecCCceeecccCCCCCcccCCccccCCCeEEeecC
Q 047157           90 KITLTNDGKLLLTYFNGSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNSR  165 (788)
Q Consensus        90 ~l~l~~~G~L~l~~~~~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqSFD~PtDtllpg~~l~~g~~l~s~~~  165 (788)
                      +|.+-.||||||.+.+ ...|...+.    ...+.|.++|||||++.++.++|+|.-                       
T Consensus        33 ~l~mQ~DGNLVLy~~~-~~vWssnt~~~~~~~~l~l~~dGnLvL~d~~g~~vWsS~t-----------------------   88 (119)
T d1b2pa_          33 RFIMQTDCNLVLYDNN-NPIWATNTGGLGNGCRAVLQPDGVLVVITNENVTVWQSPV-----------------------   88 (119)
T ss_dssp             EEEECTTSCEEEEETT-EEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECSC-----------------------
T ss_pred             EEEECCCCcEEEEECC-eEEEEecCCCCCcceEEEEEeCCCEEEECCCCcEEEECCC-----------------------
Confidence            6778899999998754 344433332    346889999999999999999998731                       


Q ss_pred             CCCCCCCCceEEeeccCCcceeeecccCCCCCcccCc
Q 047157          166 GTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGT  202 (788)
Q Consensus       166 ~~~dps~G~~~~~~~~~g~~~~~~~~~~~~~yw~~~~  202 (788)
                         .-+.|.|.+.|++||++.++.     .+.|.+++
T Consensus        89 ---~~~~~~~~l~Lq~DGNlvlYg-----~~~W~S~T  117 (119)
T d1b2pa_          89 ---AGKAGHYVLVLQPDRNVVIYG-----DALWATQT  117 (119)
T ss_dssp             ---CCCSSCEEEEECTTSCEEEEE-----SEEEECCC
T ss_pred             ---cCCCCceEEEEcCCCCEEEEC-----CCEeccCC
Confidence               113478899999999988752     34787765

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=98.41  E-value=4.5e-07  Score=76.95  Aligned_cols=82  Identities=32%  Similarity=0.537  Sum_probs=59.7

Q ss_pred             cEEEEecCCceEEEeCCCcEEEEeccc-----ccccccCCCCcEEEEecCCceeecccCCCCCcccCCccccCCCeEEee
Q 047157           89 SKITLTNDGKLLLTYFNGSVQQIYSGA-----ASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSN  163 (788)
Q Consensus        89 s~l~l~~~G~L~l~~~~~~~~~~~s~~-----~~~a~LldsGNlVl~~~~~~~lWqSFD~PtDtllpg~~l~~g~~l~s~  163 (788)
                      -.+.+-.||||+|.. ++.+.|..++.     ...+.|.++|||||++.++.++|+|=     |                
T Consensus        21 ~~l~~q~dgnLvl~~-~~~~vW~ant~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~s~-----t----------------   78 (109)
T d1kj1a_          21 YHFIMQEDCNLVLYD-HSTSVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWASH-----S----------------   78 (109)
T ss_dssp             EEEEECTTSCEEEEE-TTEEEEECCCCCTTCCCCEEEECTTSCEEEECSSSCEEEECC-----C----------------
T ss_pred             EEEEecCCCeEEEEe-CCEEEEEeCCCCCCceeEEEEEcCCceEEEEeCCCcEEEEEe-----e----------------
Confidence            477888999999987 44454444432     24578999999999999999999981     1                


Q ss_pred             cCCCCCCCCCceEEeeccCCcceeeecccCCCCCcccCc
Q 047157          164 SRGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGT  202 (788)
Q Consensus       164 ~~~~~dps~G~~~~~~~~~g~~~~~~~~~~~~~yw~~~~  202 (788)
                           ..+.|.|.+.|+++|++.++     ....|.+++
T Consensus        79 -----~~~~~~~~l~L~ddGNlvly-----~~~~W~S~t  107 (109)
T d1kj1a_          79 -----VRGNGNYVLVLQEDGNVVIY-----GSDIWSTGT  107 (109)
T ss_dssp             -----CCCSSCCEEEECTTSCEEEE-----CCEEEECCC
T ss_pred             -----ECCCCCEEEEEeCCCcEEEE-----CCCEecCCC
Confidence                 11247789999999998865     234677654

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=98.38  E-value=6.4e-07  Score=75.91  Aligned_cols=82  Identities=29%  Similarity=0.414  Sum_probs=59.5

Q ss_pred             cEEEEecCCceEEEeCCCcEEEEeccc----ccccccCCCCcEEEEecCCceeecccCCCCCcccCCccccCCCeEEeec
Q 047157           89 SKITLTNDGKLLLTYFNGSVQQIYSGA----ASLALMQNDGNFVLKNANSAVVWDSFDFPTDTILPGQVLLTGKKLYSNS  164 (788)
Q Consensus        89 s~l~l~~~G~L~l~~~~~~~~~~~s~~----~~~a~LldsGNlVl~~~~~~~lWqSFD~PtDtllpg~~l~~g~~l~s~~  164 (788)
                      -+|.+-.||||||.+. +.+.|...+.    ...+.|.++|||||++.++.++|+|=   |                   
T Consensus        21 ~~l~~q~DGNLvly~~-~~~vW~s~~~~~~~~~~l~l~~~Gnlvl~~~~g~~vWsS~---t-------------------   77 (108)
T d1jpca_          21 FVFIMQEDCNLVLYDV-DKPIWATNTGGLSRSCFLSMQTDGNLVVYNPSNKPIWASN---T-------------------   77 (108)
T ss_dssp             EEEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECC---C-------------------
T ss_pred             EEEEECCCCeEEEEeC-CceeeEeCCCCCCCccEEEEeccceEEEECCCccceEEcc---c-------------------
Confidence            4788889999999874 3443332222    24688999999999999999999871   1                   


Q ss_pred             CCCCCCCCCceEEeeccCCcceeeecccCCCCCcccCc
Q 047157          165 RGTADYSTGNYTLEMQADGNLVLSAYHFADPGYWYTGT  202 (788)
Q Consensus       165 ~~~~dps~G~~~~~~~~~g~~~~~~~~~~~~~yw~~~~  202 (788)
                          ..+++.|.+.|+.+|++.++.     .+.|.+++
T Consensus        78 ----~~~~~~~~l~L~ddGNlVly~-----~~~W~S~t  106 (108)
T d1jpca_          78 ----GGQNGNYVCILQKDRNVVIYG-----TDRWATGT  106 (108)
T ss_dssp             ----CCSCSCEEEEECTTSCEEEEE-----CCCCCCCC
T ss_pred             ----cCCCCcEEEEEcCCCCEEEeC-----CCcccCCC
Confidence                113478889999999988752     24787754

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.01  E-value=6.9e-06  Score=81.57  Aligned_cols=133  Identities=17%  Similarity=0.107  Sum_probs=91.3

Q ss_pred             cccccceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC-ccccceEeeEEecCCeEEEEEecCCCCCHh
Q 047157          497 GTGSSGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDKRLLVYELMPNGTLS  575 (788)
Q Consensus       497 g~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lV~e~~~~gsL~  575 (788)
                      +.++.+.||+...    ++..+.+|+...........+.+|...+..+. +--+.+++.+..+++..++||+++++.++.
T Consensus        23 ~G~s~~~v~rv~~----~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~   98 (263)
T d1j7la_          23 EGMSPAKVYKLVG----ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS   98 (263)
T ss_dssp             CCCSSSEEEEEEC----SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred             CCCCCCcEEEEEe----CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccc
Confidence            3344578997642    34467788776554434445677887776653 444678888888889999999999998887


Q ss_pred             HhhhccCCCCCHHHHHHHHHHHHHHHHHhhhcc-----------------------------------------------
Q 047157          576 NFLFHEGQRPGWVQRVEIALGVARGLLYLHEEC-----------------------------------------------  608 (788)
Q Consensus       576 ~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-----------------------------------------------  608 (788)
                      +.....      .....++.++++.++.||+..                                               
T Consensus        99 ~~~~~~------~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (263)
T d1j7la_          99 EEYEDE------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYD  172 (263)
T ss_dssp             HHTTTC------SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHH
T ss_pred             cccccc------ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHH
Confidence            654221      112335666777777777521                                               


Q ss_pred             ---------CCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          609 ---------ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       609 ---------~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                               ...++|+|+.|.||+++     ++..+-|+||+.+.
T Consensus       173 ~l~~~~~~~~~~l~HgD~~~~Nil~~-----~~~~~~lIDwe~a~  212 (263)
T d1j7la_         173 FLKTEKPEEELVFSHGDLGDSNIFVK-----DGKVSGFIDLGRSG  212 (263)
T ss_dssp             HHHHSCCCCCEEEECSCCCTTSEEEE-----TTEEEEECCCTTCE
T ss_pred             HHHhcCCcCCcEEEEeeccCcceeec-----CCceEEEeechhcc
Confidence                     12379999999999997     55556799998775

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.44  E-value=0.00021  Score=70.03  Aligned_cols=129  Identities=16%  Similarity=0.114  Sum_probs=82.5

Q ss_pred             ccccc-cceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCC--ccccceEeeEEecCCeEEEEEecCCCC
Q 047157          496 VGTGS-SGKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH--HKNLVRLLGFCSEEDKRLLVYELMPNG  572 (788)
Q Consensus       496 lg~G~-~g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~~~~lV~e~~~~g  572 (788)
                      +..|. .+.||+...   +.+..+.+|......   ...+..|...++.+.  .-.+.+++.+..+++..++|||+++|.
T Consensus        18 ~~~G~s~~~v~r~~~---~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~   91 (255)
T d1nd4a_          18 QTIGCSDAAVFRLSA---QGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQ   91 (255)
T ss_dssp             CSCTTSSCEEEEEEC---TTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSE
T ss_pred             cCCcccCCeEEEEEe---CCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecc
Confidence            34444 367898764   345567888765432   224566777776553  334678888888888999999999887


Q ss_pred             CHhHhhhccCCCCCHHHHHHHHHHHHHHHHHhhhc---------------------------------------------
Q 047157          573 TLSNFLFHEGQRPGWVQRVEIALGVARGLLYLHEE---------------------------------------------  607 (788)
Q Consensus       573 sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---------------------------------------------  607 (788)
                      ++.+..      ...   ..++.++++.|+-||..                                             
T Consensus        92 ~~~~~~------~~~---~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (255)
T d1nd4a_          92 DLLSSH------LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF  162 (255)
T ss_dssp             ETTTSC------CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred             cccccc------ccH---HHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHH
Confidence            654321      111   12233444444445431                                             


Q ss_pred             ----------cCCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          608 ----------CETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       608 ----------~~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                                ....++|+|+.|.|||++     ++..+-|+||+.+.
T Consensus       163 ~~l~~~~~~~~~~~liHgD~~~~Nvl~~-----~~~~~~iID~~~~~  204 (255)
T d1nd4a_         163 ARLKARMPDGEDLVVTHGDACLPNIMVE-----NGRFSGFIDCGRLG  204 (255)
T ss_dssp             HHHHHTCCSSCCEEEECSSCCGGGEEEE-----TTEEEEECCCTTCE
T ss_pred             HHHHHhCCccCCceEEeCCCCCcceEEe-----CCceEEEEEchhcc
Confidence                      012489999999999997     55567799998775

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=96.73  E-value=0.0018  Score=67.59  Aligned_cols=76  Identities=13%  Similarity=0.089  Sum_probs=46.1

Q ss_pred             ccccccccceEEEEEEeccCcceeeeeeecccch-------HHHHHHHHHHHHHhcCCC---ccccceEeeEEecCCeEE
Q 047157          494 KLVGTGSSGKVYRGILRLKDTQIEIAVKKLEKDI-------EKTNEEFMTELKIIGRTH---HKNLVRLLGFCSEEDKRL  563 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~l~~~~-------~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~  563 (788)
                      +.||.|....||+....  .++..++||.-....       .....+...|.+.|+.+.   ...+++++.+  +.+..+
T Consensus        32 ~eig~G~~N~vfrV~~~--~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~  107 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQ--EHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV  107 (392)
T ss_dssp             EECCSSSSEEEEEEEC------CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred             EEeCCCceEeEEEEEeC--CCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCE
Confidence            57899999999998764  445678888543211       111233456777776552   2456677655  344567


Q ss_pred             EEEecCCCCC
Q 047157          564 LVYELMPNGT  573 (788)
Q Consensus       564 lV~e~~~~gs  573 (788)
                      +|||++++..
T Consensus       108 lvmE~L~~~~  117 (392)
T d2pula1         108 TVMEDLSHLK  117 (392)
T ss_dssp             EEECCCTTSE
T ss_pred             EEEeccCCcc
Confidence            9999997654

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.44  E-value=0.013  Score=60.82  Aligned_cols=75  Identities=17%  Similarity=0.149  Sum_probs=47.5

Q ss_pred             ccccccccceEEEEEEecc-----CcceeeeeeecccchHHHHHHHHHHHHHhcCCC-ccccceEeeEEecCCeEEEEEe
Q 047157          494 KLVGTGSSGKVYRGILRLK-----DTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTH-HKNLVRLLGFCSEEDKRLLVYE  567 (788)
Q Consensus       494 ~~lg~G~~g~Vy~~~~~~~-----~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lV~e  567 (788)
                      +.|+.|-.-.+|+......     .....|.+++... .. ......+|..+++.+. +.-.+++++++.+    .+|+|
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~-~~-~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~e  121 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN-PE-TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  121 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS-CC-CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC-cc-hhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEE
Confidence            5677788889999876521     1223455555432 22 2234557888888774 4334688888754    58899


Q ss_pred             cCCCCCH
Q 047157          568 LMPNGTL  574 (788)
Q Consensus       568 ~~~~gsL  574 (788)
                      |+++..|
T Consensus       122 fi~g~~l  128 (395)
T d1nw1a_         122 YIPSRPL  128 (395)
T ss_dssp             CCCEEEC
T ss_pred             EeccccC
Confidence            9987544

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=94.97  E-value=0.037  Score=55.53  Aligned_cols=68  Identities=12%  Similarity=0.139  Sum_probs=41.3

Q ss_pred             ceEEEEEEeccCcceeeeeeecccchHHHHHHHHHHHHHhcCCCcccc-----ceEe--eEEecCCeEEEEEecCCCCC
Q 047157          502 GKVYRGILRLKDTQIEIAVKKLEKDIEKTNEEFMTELKIIGRTHHKNL-----VRLL--GFCSEEDKRLLVYELMPNGT  573 (788)
Q Consensus       502 g~Vy~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~--~~~~~~~~~~lV~e~~~~gs  573 (788)
                      -.||++..   .++..+++|..+.. ....+++..|...+..|....+     +..-  ..+......+.++++++|..
T Consensus        36 N~vy~v~~---~dg~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~  110 (325)
T d1zyla1          36 NRVYQFQD---EDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQ  110 (325)
T ss_dssp             SEEEEECC---TTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEE
T ss_pred             ceeEEEEc---CCCCEEEEEEeCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcC
Confidence            47998866   45668999987543 2234566778777766642222     1111  12345667888999987643

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.13  E-value=0.015  Score=35.84  Aligned_cols=32  Identities=34%  Similarity=0.801  Sum_probs=26.2

Q ss_pred             cccccCCCCCCCcccccCCCCCcccCCCCCCccC
Q 047157          276 DPCIVNCICGVYGMCTSSDNETVTCNCIPGYTPL  309 (788)
Q Consensus       276 ~~C~~~~~CG~~g~C~~~~~~~~~C~C~~GF~~~  309 (788)
                      |.|.+-..|| +|-|+.-. ....|.|-+||+|.
T Consensus         2 dECsignpCG-nGTCtNvi-GgFec~C~~GFepg   33 (39)
T d1emoa2           2 DECSVGNPCG-NGTCKNVI-GGFECTCEEGFEPG   33 (39)
T ss_dssp             CGGGTTCSSS-SSCEEECS-SSEEECCSSSSCCC
T ss_pred             CccccCCccC-Cceeeecc-cceEEeecCCcCCC
Confidence            7899999998 57897543 46679999999985

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=91.53  E-value=0.44  Score=46.81  Aligned_cols=31  Identities=23%  Similarity=0.367  Sum_probs=26.5

Q ss_pred             CCceEecCCCCCcEEeccCCCCCCCcEEEeecCCcc
Q 047157          609 ETQIIHCDIKPQNVLLDLKTLDTNYMAKISDFGISK  644 (788)
Q Consensus       609 ~~~ivH~dlkp~NIll~~~~~~~~~~~kL~Dfg~a~  644 (788)
                      ..++||+|+.++||+++     .+...-|+||+.+.
T Consensus       182 ~~giIHgDl~~dNvl~~-----~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         182 PAGVIHADLFQDNVFFL-----GDELSGLIDFYFAC  212 (316)
T ss_dssp             CEEEECSCCCGGGEEEE-----TTEEEEECCCTTCE
T ss_pred             ccccccCCcchhhhhcc-----cccceeEecccccc
Confidence            45899999999999998     66566899999875

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.94  E-value=0.1  Score=34.40  Aligned_cols=31  Identities=32%  Similarity=0.827  Sum_probs=25.1

Q ss_pred             ccccc-CCCCCCCcccccCCCCCcccCCCCCCc
Q 047157          276 DPCIV-NCICGVYGMCTSSDNETVTCNCIPGYT  307 (788)
Q Consensus       276 ~~C~~-~~~CG~~g~C~~~~~~~~~C~C~~GF~  307 (788)
                      |+|.. ...|..+|.|... .....|.|++||+
T Consensus         4 deC~~~~~pC~n~g~C~n~-~g~y~C~C~~G~~   35 (42)
T d2vj3a1           4 DECSLGANPCEHAGKCINT-LGSFECQCLQGYT   35 (42)
T ss_dssp             CTTTSSSCSSSTTCEEEEC-SSSEEEECCTTEE
T ss_pred             ccccCCCCCCCCCcEeECC-CCCEEeECCCCCc
Confidence            56765 5689999999864 4568999999997

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.73  E-value=0.37  Score=30.97  Aligned_cols=31  Identities=29%  Similarity=0.741  Sum_probs=23.3

Q ss_pred             cccccCCCCCCCcccccCCCCCcccCCCCCCcc
Q 047157          276 DPCIVNCICGVYGMCTSSDNETVTCNCIPGYTP  308 (788)
Q Consensus       276 ~~C~~~~~CG~~g~C~~~~~~~~~C~C~~GF~~  308 (788)
                      |.|. ..-|-..|.|... .....|.|++||+=
T Consensus         1 D~C~-~~PC~ngg~C~~~-~~~y~C~C~~G~~G   31 (39)
T d1xkba1           1 DQCE-TSPCQNQGKCKDG-LGEYTCTCLEGFEG   31 (39)
T ss_dssp             CTTT-TCCCCSSCEECCC-SSSCCEECCTTEET
T ss_pred             CcCC-CCCCCCCcEEECC-CCCEEEECCCCCCc
Confidence            3555 4678889999754 45788999999973

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.07  E-value=0.48  Score=31.18  Aligned_cols=31  Identities=29%  Similarity=0.578  Sum_probs=24.0

Q ss_pred             cccccCCCCCCCcccccCCCCCcccCCCCCCcc
Q 047157          276 DPCIVNCICGVYGMCTSSDNETVTCNCIPGYTP  308 (788)
Q Consensus       276 ~~C~~~~~CG~~g~C~~~~~~~~~C~C~~GF~~  308 (788)
                      |+|.... |+.++.|.... .+-.|.|++||+.
T Consensus         6 dEC~~~~-~~~~~~C~Nt~-Gsy~C~C~~Gy~~   36 (43)
T d1emoa1           6 DECKEPD-VCKHGQCINTD-GSYRCECPFGYIL   36 (43)
T ss_dssp             CSSSSTT-SCSSSCCCCCS-SCCCCCCCTTEEE
T ss_pred             eccCCcC-CCCCCEeECCC-CCeEeECCCCccc
Confidence            7887554 55789998654 5788999999985