Citrus Sinensis ID: 047206

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370---
MEIKLLLLCLFPLASFFLQCNCHCAASKKKGTAASGIRGMFVFGSSLVDNGNNNFLQNKAKVNYLPYGIDFPYGPSGRYTNGKNVIDLLGEQLQLPGLIPPFADPSTKASKIVHGVNFASGGSGILDDTGSFLGHVYSLTEQINKFEEVTLPELEAELGCNSTHLLSKYLFVVGVGGNDYTFNYFRPSLNGSTILDQGFASNLTNSLSQHLKKLYSLGGRKFVLMSLYPIGCIPMVKSFKPKQKFCLRELNLGVRQFNTQLKSTADAIKEQMPGSNIVIVNQYKIIMDIIKDPSSKGFKDAKRACCDLIPLSEGGNGVSCRKGGNVCGDRNAYVYFDGLHPTEAVNVHIANKAFSSYLKNEVYPINVSQLAKL
ccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccEEcccccHHHHHHHHHHHHHHccccccccccccHHHHHcc
ccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEccccEcccccccHHHHHHcccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccEEEEEEcccccccccccHHHHHcEccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcEEEEEEccccHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHcHHHcccEEcccccccccccccccEEEEcccccccccccccEEEEcccccHHHHHHHHHHHHHccccccccccccHHHHHcc
MEIKLLLLCLFPLasfflqcnchcaaskkkgtaasgirgMFVFGsslvdngnnnflqnkakvnylpygidfpygpsgrytngkNVIDLLGEqlqlpglippfadpstkaskivhgvnfasggsgilddtgsflgHVYSLTEQINKFEEVTLPELEAELGCNSTHLLSKYLFVVGvggndytfnyfrpslngstildqgFASNLTNSLSQHLKKLYSLGGRKFVLmslypigcipmvksfkpkqkfCLRELNLGVRQFNTQLKSTADAIkeqmpgsniviVNQYKIIMDIikdpsskgfkdakraccdliplseggngvscrkggnvcgdrnayvyfdglhpteAVNVHIANKAFSsylknevypinvSQLAKL
MEIKLLLLCLFPLASFFLQCNCHCAASKKKGTAASGIRGMFVFGSSLVDNGNNNFLQNKAKVNYLPYGIDFPYGPSGRYTNGKNVIDLLGEQLQLPGLIPPFADPSTKASKIVHGVNFASGGSGILDDTGSFLGHVYSLTEQINKFEEVTLPELEAELGCNSTHLLSKYLFVVGVGGNDYTFNYFRPSLNGSTILDQGFASNLTNSLSQHLKKLYSLGGRKFVLMSLYPIGCIPMVKSFKPKQKFCLRELNLGVRQFNTQLKSTAdaikeqmpgsniVIVNQYKIIMDIIKDPSSKGFKDAKRACCDLiplseggngvsCRKGGNVCGDRNAYVYFDGLHPTEAVNVHIANKAFssylknevypinvsqlakl
MEIKllllclfplasfflQCNCHCaaskkkgtaasgIRGMFVFGSSLVDNGNNNFLQNKAKVNYLPYGIDFPYGPSGRYTNGKNVIDLLGEQLQLPGLIPPFADPSTKASKIVHGVNFASGGSGILDDTGSFLGHVYSLTEQINKFEEVTLPELEAELGCNSTHLLSKYLFVVGVGGNDYTFNYFRPSLNGSTILDQGFASNLTNSLSQHLKKLYSLGGRKFVLMSLYPIGCIPMVKSFKPKQKFCLRELNLGVRQFNTQLKSTADAIKEQMPGSNIVIVNQYKIIMDIIKDPSSKGFKDAKRACCDLIPLSEGGNGVSCRKGGNVCGDRNAYVYFDGLHPTEAVNVHIANKAFSSYLKNEVYPINVSQLAKL
**IKLLLLCLFPLASFFLQCNCHCAASKKKGTAASGIRGMFVFGSSLVDNGNNNFLQNKAKVNYLPYGIDFPYGPSGRYTNGKNVIDLLGEQLQLPGLIPPFADPSTKASKIVHGVNFASGGSGILDDTGSFLGHVYSLTEQINKFEEVTLPELEAELGCNSTHLLSKYLFVVGVGGNDYTFNYFRPSLNGSTILDQGFASNLTNSLSQHLKKLYSLGGRKFVLMSLYPIGCIPMVKSFKPKQKFCLRELNLGVRQFNTQLKSTADAIKEQMPGSNIVIVNQYKIIMDIIKDPSSKGFKDAKRACCDLIPLSEGGNGVSCRKGGNVCGDRNAYVYFDGLHPTEAVNVHIANKAFSSYLKNEVYPINV******
**IKLLLLCLFPLASFFLQCNCHCAASKKKGTAASGIRGMFVFGSSLVDNGNNNFLQNKAKVNYLPYGIDFPYGPSGRYTNGKNVIDLLGEQLQLPGLIPPFADPSTKASKIVHGVNFASGGSGILDDTGSFLGHVYSLTEQINKFEEVTLPE**********HLLSKYLFVVGVGGNDYTFNYFRPSLNGSTILDQGFASNLTNSLSQHLKKLYSLGGRKFVLMSLYPIGCIPMVKSFKPKQKFCLRELNLGVRQFNTQLKSTADAIKEQMPGSNIVIVNQYKIIMDIIKDPSSKGFKDAKRACCDLIPLSEGGNGVSCRKGGNVCGDRNAYVYFDGLHPTEAVNVHIANKAFSSYLKNEVYPINVSQLAKL
MEIKLLLLCLFPLASFFLQCNCHCAASKKKGTAASGIRGMFVFGSSLVDNGNNNFLQNKAKVNYLPYGIDFPYGPSGRYTNGKNVIDLLGEQLQLPGLIPPFADPSTKASKIVHGVNFASGGSGILDDTGSFLGHVYSLTEQINKFEEVTLPELEAELGCNSTHLLSKYLFVVGVGGNDYTFNYFRPSLNGSTILDQGFASNLTNSLSQHLKKLYSLGGRKFVLMSLYPIGCIPMVKSFKPKQKFCLRELNLGVRQFNTQLKSTADAIKEQMPGSNIVIVNQYKIIMDIIKDPSSKGFKDAKRACCDLIPLSEGGNGVSCRKGGNVCGDRNAYVYFDGLHPTEAVNVHIANKAFSSYLKNEVYPINVSQLAKL
*EIKLLLLCLFPLASFFLQCNCHCAASKKKGTAASGIRGMFVFGSSLVDNGNNNFLQNKAKVNYLPYGIDFPYGPSGRYTNGKNVIDLLGEQLQLPGLIPPFADPSTKASKIVHGVNFASGGSGILDDTGSFLGHVYSLTEQINKFEEVTLPELEAELGCNSTHLLSKYLFVVGVGGNDYTFNYFRPSLNGSTILDQGFASNLTNSLSQHLKKLYSLGGRKFVLMSLYPIGCIPMVKSFKPKQKFCLRELNLGVRQFNTQLKSTADAIKEQMPGSNIVIVNQYKIIMDIIKDPSSKGFKDAKRACCDLIPLSEGGNGVSCRKGGNVCGDRNAYVYFDGLHPTEAVNVHIANKAFSSYLKNEVYPINVSQLAK*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEIKLLLLCLFPLASFFLQCNCHCAASKKKGTAASGIRGMFVFGSSLVDNGNNNFLQNKAKVNYLPYGIDFPYGPSGRYTNGKNVIDLLGEQLQLPGLIPPFADPSTKASKIVHGVNFASGGSGILDDTGSFLGHVYSLTEQINKFEEVTLPELEAELGCNSTHLLSKYLFVVGVGGNDYTFNYFRPSLNGSTILDQGFASNLTNSLSQHLKKLYSLGGRKFVLMSLYPIGCIPMVKSFKPKQKFCLRELNLGVRQFNTQLKSTADAIKEQMPGSNIVIVNQYKIIMDIIKDPSSKGFKDAKRACCDLIPLSEGGNGVSCRKGGNVCGDRNAYVYFDGLHPTEAVNVHIANKAFSSYLKNEVYPINVSQLAKL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query373 2.2.26 [Sep-21-2011]
Q9FVV1374 GDSL esterase/lipase At1g yes no 0.898 0.895 0.394 1e-61
Q9C7N4363 GDSL esterase/lipase At1g no no 0.903 0.928 0.362 3e-61
O23470368 GDSL esterase/lipase At4g no no 0.949 0.961 0.372 1e-60
Q9FNP2385 GDSL esterase/lipase At5g no no 0.957 0.927 0.377 4e-58
Q9FK75362 GDSL esterase/lipase At5g no no 0.876 0.903 0.355 8e-57
Q93YW8361 GDSL esterase/lipase At4g no no 0.876 0.905 0.349 1e-55
Q9C7N5364 GDSL esterase/lipase At1g no no 0.873 0.895 0.346 8e-55
Q8LFJ9364 GDSL esterase/lipase 7 OS no no 0.879 0.901 0.377 4e-54
Q8L5Z1370 GDSL esterase/lipase At1g no no 0.871 0.878 0.356 4e-54
Q9SF78384 GDSL esterase/lipase At1g no no 0.876 0.851 0.357 2e-52
>sp|Q9FVV1|GDL28_ARATH GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana GN=At1g71250 PE=2 SV=1 Back     alignment and function desciption
 Score =  237 bits (604), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/347 (39%), Positives = 197/347 (56%), Gaps = 12/347 (3%)

Query: 32  TAASGIRGMFVFGSSLVDNGNNNFLQNKAKVNYLPYGIDFPYGPSGRYTNGKNVIDLLGE 91
           T  + +  MFV G SLVD GNNNFLQ  A+ N+LPYGID  Y P+GR++NG   IDLL  
Sbjct: 34  TGQARVPAMFVLGDSLVDAGNNNFLQTVARANFLPYGIDMNYQPTGRFSNGLTFIDLLAR 93

Query: 92  QLQLPGLIPPFADPSTKASKIVHGVNFASGGSGILDDTGSFLGHVYSLTEQINKFEEVTL 151
            L++P   PPFADP+T  ++I+ GVN+AS  +GILD +G   G  +SL +Q+    E TL
Sbjct: 94  LLEIPS-PPPFADPTTSGNRILQGVNYASAAAGILDVSGYNYGGRFSLNQQMVNL-ETTL 151

Query: 152 PELEAELGC-NSTHLLSKYLFVVGVGGNDYTFNYFRPSLNGSTILDQ--GFASNLTNSLS 208
            +L   +   N T  L++ L V+  G NDY  NY  P+L  S+I  +   FA+ L +  +
Sbjct: 152 SQLRTMMSPQNFTDYLARSLVVLVFGSNDYINNYLMPNLYDSSIRFRPPDFANLLLSQYA 211

Query: 209 QHLKKLYSLGGRKFVLMSLYPIGCIP--MVKSFKPKQKFCLRELNLGVRQFNTQLKSTAD 266
           + L  LYSLG RK  +  + P+GCIP    +   P  + C+  +N  +  FN  LKS  D
Sbjct: 212 RQLLTLYSLGLRKIFIPGVAPLGCIPNQRARGISPPDR-CVDSVNQILGTFNQGLKSLVD 270

Query: 267 AIKEQMPGSNIVIVNQYKIIMDIIKDPSSKGFKDAKRACCDLIPLSEGGNGVSCRKGGNV 326
            + ++ PG+  V  N Y  I DI+ +P++ GF    RACC    +      ++C      
Sbjct: 271 QLNQRSPGAIYVYGNTYSAIGDILNNPAAYGFSVVDRACCG---IGRNQGQITCLPLQTP 327

Query: 327 CGDRNAYVYFDGLHPTEAVNVHIANKAFSSYLKNEVYPINVSQLAKL 373
           C +RN YV++D  HPT+  N  +A +AF     ++ YP+NV Q+  L
Sbjct: 328 CPNRNQYVFWDAFHPTQTANSILARRAFYG-PPSDAYPVNVQQMTLL 373

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q9C7N4|GDL15_ARATH GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana GN=At1g29670 PE=2 SV=1 Back     alignment and function description
>sp|O23470|GDL64_ARATH GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=3 SV=2 Back     alignment and function description
>sp|Q9FNP2|GDL75_ARATH GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1 Back     alignment and function description
>sp|Q9FK75|GDL82_ARATH GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana GN=At5g45670 PE=2 SV=1 Back     alignment and function description
>sp|Q93YW8|GDL65_ARATH GDSL esterase/lipase At4g18970 OS=Arabidopsis thaliana GN=At4g18970 PE=2 SV=1 Back     alignment and function description
>sp|Q9C7N5|GDL14_ARATH GDSL esterase/lipase At1g29660 OS=Arabidopsis thaliana GN=At1g29660 PE=2 SV=1 Back     alignment and function description
>sp|Q8LFJ9|GLIP7_ARATH GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=GLIP7 PE=2 SV=1 Back     alignment and function description
>sp|Q8L5Z1|GDL17_ARATH GDSL esterase/lipase At1g33811 OS=Arabidopsis thaliana GN=At1g33811 PE=2 SV=1 Back     alignment and function description
>sp|Q9SF78|GDL29_ARATH GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana GN=At1g71691 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query373
224135459373 predicted protein [Populus trichocarpa] 0.975 0.975 0.614 1e-125
255585218369 zinc finger protein, putative [Ricinus c 0.959 0.970 0.614 1e-118
225460470372 PREDICTED: GDSL esterase/lipase At4g1623 0.962 0.965 0.555 1e-107
449443984386 PREDICTED: GDSL esterase/lipase At4g1623 0.943 0.911 0.563 1e-105
449521495386 PREDICTED: LOW QUALITY PROTEIN: GDSL est 0.943 0.911 0.563 1e-104
296088675328 unnamed protein product [Vitis vinifera] 0.879 1.0 0.577 1e-103
326495922414 predicted protein [Hordeum vulgare subsp 0.884 0.797 0.501 1e-91
326521992414 predicted protein [Hordeum vulgare subsp 0.884 0.797 0.501 1e-91
357117823397 PREDICTED: GDSL esterase/lipase At1g2967 0.967 0.909 0.474 2e-91
115468542407 Os06g0560700 [Oryza sativa Japonica Grou 0.879 0.805 0.481 8e-85
>gi|224135459|ref|XP_002327223.1| predicted protein [Populus trichocarpa] gi|222835593|gb|EEE74028.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  453 bits (1165), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/371 (61%), Positives = 277/371 (74%), Gaps = 7/371 (1%)

Query: 4   KLLLLCLFPLASFFLQCNCHCAASKKKGTAASGIRGMFVFGSSLVDNGNNNFLQNK-AKV 62
           +LLLL +  LA  FL C+C+  A+ K G   + IRGMFVFGSSLVDNGNNNFL+N  AK 
Sbjct: 9   RLLLLTIPILACVFL-CSCYARATDKNG---ARIRGMFVFGSSLVDNGNNNFLKNSMAKA 64

Query: 63  NYLPYGIDFPYGPSGRYTNGKNVIDLLGEQLQLPGLIPPFADPSTKASKIVHGVNFASGG 122
           ++LPYGIDFPYGPSGR+TNGKNVIDLL +QL+LP L+P F DPSTK +KI+HGVN+ASG 
Sbjct: 65  DFLPYGIDFPYGPSGRFTNGKNVIDLLCDQLKLP-LVPAFTDPSTKGTKIIHGVNYASGA 123

Query: 123 SGILDDTGSFLGHVYSLTEQINKFEEVTLPELEAELGCNSTHLLSKYLFVVGVGGNDYTF 182
           SGILDDTG   G+V SL +Q+  FEEVTLP LEAE+G     LL KYLFVVG GGNDY+F
Sbjct: 124 SGILDDTGLLAGNVISLNQQVRNFEEVTLPVLEAEMGFQRRELLPKYLFVVGTGGNDYSF 183

Query: 183 NYFRPSLNGSTILDQGFASNLTNSLSQHLKKLYSLGGRKFVLMSLYPIGCIPMVKSFKPK 242
           NYF    N +  L + F +NLT  LS  L+KLYSLGGRKF LM++ PIGC PMV + +  
Sbjct: 184 NYFLRQSNANVSL-EAFTANLTRKLSGQLQKLYSLGGRKFALMAVNPIGCSPMVMANRRT 242

Query: 243 QKFCLRELNLGVRQFNTQLKSTADAIKEQMPGSNIVIVNQYKIIMDIIKDPSSKGFKDAK 302
           +  C+  LN     FN  LKS  D  KEQMPGSN++ VN YK+I DIIK+P S+GFKD  
Sbjct: 243 RNGCIEGLNKAAHLFNAHLKSLVDVSKEQMPGSNVIFVNSYKMIRDIIKNPVSRGFKDTN 302

Query: 303 RACCDLIPLSEGGNGVSCRKGGNVCGDRNAYVYFDGLHPTEAVNVHIANKAFSSYLKNEV 362
            ACC+++ L+EGGNG+ C+K G  C DRN +V+FDGLHPTEAVN+ IA KA++S L +EV
Sbjct: 303 SACCEVMSLNEGGNGILCKKEGQACEDRNIHVFFDGLHPTEAVNIQIATKAYNSNLTSEV 362

Query: 363 YPINVSQLAKL 373
           YPINV QL+ L
Sbjct: 363 YPINVKQLSML 373

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255585218|ref|XP_002533311.1| zinc finger protein, putative [Ricinus communis] gi|223526855|gb|EEF29068.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225460470|ref|XP_002272970.1| PREDICTED: GDSL esterase/lipase At4g16230 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449443984|ref|XP_004139755.1| PREDICTED: GDSL esterase/lipase At4g16230-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449521495|ref|XP_004167765.1| PREDICTED: LOW QUALITY PROTEIN: GDSL esterase/lipase At4g16230-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|296088675|emb|CBI38125.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|326495922|dbj|BAJ90583.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|326521992|dbj|BAK04124.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|357117823|ref|XP_003560661.1| PREDICTED: GDSL esterase/lipase At1g29670-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|115468542|ref|NP_001057870.1| Os06g0560700 [Oryza sativa Japonica Group] gi|53792727|dbj|BAD53738.1| putative proline-rich protein APG [Oryza sativa Japonica Group] gi|113595910|dbj|BAF19784.1| Os06g0560700 [Oryza sativa Japonica Group] gi|125555735|gb|EAZ01341.1| hypothetical protein OsI_23376 [Oryza sativa Indica Group] gi|125597576|gb|EAZ37356.1| hypothetical protein OsJ_21696 [Oryza sativa Japonica Group] gi|215693270|dbj|BAG88652.1| unnamed protein product [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query373
TAIR|locus:2032333374 AT1G71250 "AT1G71250" [Arabido 0.884 0.882 0.403 6.4e-60
TAIR|locus:2013663363 AT1G29670 "AT1G29670" [Arabido 0.873 0.898 0.367 4.5e-59
TAIR|locus:2159547385 AT5G08460 "AT5G08460" [Arabido 0.873 0.846 0.401 3.2e-58
TAIR|locus:2171948362 AT5G45670 "AT5G45670" [Arabido 0.876 0.903 0.355 3.7e-55
TAIR|locus:2143156364 GLIP7 "AT5G15720" [Arabidopsis 0.871 0.892 0.387 6.1e-55
TAIR|locus:505006166370 AT1G33811 "AT1G33811" [Arabido 0.876 0.883 0.358 5.5e-54
TAIR|locus:2824531384 AT1G71691 "AT1G71691" [Arabido 0.876 0.851 0.357 7e-54
TAIR|locus:2013658364 AT1G29660 "AT1G29660" [Arabido 0.873 0.895 0.349 2.4e-53
TAIR|locus:2046743387 AT2G23540 "AT2G23540" [Arabido 0.865 0.834 0.347 1.7e-50
TAIR|locus:2151744356 AT5G37690 [Arabidopsis thalian 0.833 0.873 0.328 6.7e-49
TAIR|locus:2032333 AT1G71250 "AT1G71250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
 Identities = 138/342 (40%), Positives = 198/342 (57%)

Query:    37 IRGMFVFGSSLVDNGNNNFLQNKAKVNYLPYGIDFPYGPSGRYTNGKNVIDLLGEQLQLP 96
             +  MFV G SLVD GNNNFLQ  A+ N+LPYGID  Y P+GR++NG   IDLL   L++P
Sbjct:    39 VPAMFVLGDSLVDAGNNNFLQTVARANFLPYGIDMNYQPTGRFSNGLTFIDLLARLLEIP 98

Query:    97 GLIPPFADPSTKASKIVHGVNFASGGSGILDDTGSFLGHVYSLTEQINKFEEVTLPELEA 156
                PPFADP+T  ++I+ GVN+AS  +GILD +G   G  +SL +Q+   E  TL +L  
Sbjct:    99 SP-PPFADPTTSGNRILQGVNYASAAAGILDVSGYNYGGRFSLNQQMVNLE-TTLSQLRT 156

Query:   157 ELGC-NSTHLLSKYLFVVGVGGNDYTFNYFRPSLNGSTILDQ--GFASNLTNSLSQHLKK 213
              +   N T  L++ L V+  G NDY  NY  P+L  S+I  +   FA+ L +  ++ L  
Sbjct:   157 MMSPQNFTDYLARSLVVLVFGSNDYINNYLMPNLYDSSIRFRPPDFANLLLSQYARQLLT 216

Query:   214 LYSLGGRKFVLMSLYPIGCIP--MVKSFKPKQKFCLRELNLGVRQFNTQLKSTADAIKEQ 271
             LYSLG RK  +  + P+GCIP    +   P  + C+  +N  +  FN  LKS  D + ++
Sbjct:   217 LYSLGLRKIFIPGVAPLGCIPNQRARGISPPDR-CVDSVNQILGTFNQGLKSLVDQLNQR 275

Query:   272 MPGSNIVIVNQYKIIMDIIKDPSSKGFKDAKRACCDLIPLSEGGNGVSCRKGGNVCGDRN 331
              PG+  V  N Y  I DI+ +P++ GF    RACC  I  ++G   ++C      C +RN
Sbjct:   276 SPGAIYVYGNTYSAIGDILNNPAAYGFSVVDRACCG-IGRNQGQ--ITCLPLQTPCPNRN 332

Query:   332 AYVYFDGLHPTEAVNVHIANKAFSSYLKNEVYPINVSQLAKL 373
              YV++D  HPT+  N  +A +AF     ++ YP+NV Q+  L
Sbjct:   333 QYVFWDAFHPTQTANSILARRAFYGP-PSDAYPVNVQQMTLL 373
GO:0004091 "carboxylesterase activity" evidence=ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0016298 "lipase activity" evidence=IEA
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA
TAIR|locus:2013663 AT1G29670 "AT1G29670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2159547 AT5G08460 "AT5G08460" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171948 AT5G45670 "AT5G45670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143156 GLIP7 "AT5G15720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006166 AT1G33811 "AT1G33811" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2824531 AT1G71691 "AT1G71691" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2013658 AT1G29660 "AT1G29660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046743 AT2G23540 "AT2G23540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151744 AT5G37690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FVV1GDL28_ARATH3, ., 1, ., 1, ., -0.39480.89810.8957yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.1LOW CONFIDENCE prediction!
3rd Layer3.1.1.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_scaffold_41000055
hypothetical protein (373 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query373
cd01837315 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase 1e-109
PLN03156351 PLN03156, PLN03156, GDSL esterase/lipase; Provisio 7e-55
cd01846270 cd01846, fatty_acyltransferase_like, Fatty acyltra 1e-39
COG3240370 COG3240, COG3240, Phospholipase/lecithinase/hemoly 1e-22
cd01847281 cd01847, Triacylglycerol_lipase_like, Triacylglyce 2e-16
pfam00657219 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydro 2e-08
>gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information 
 Score =  322 bits (828), Expect = e-109
 Identities = 133/320 (41%), Positives = 190/320 (59%), Gaps = 9/320 (2%)

Query: 40  MFVFGSSLVDNGNNNFLQNKAKVNYLPYGIDFPYGPSGRYTNGKNVIDLLGEQLQLPGLI 99
           +FVFG SLVD GNNN+L   AK N+ PYGIDFP  P+GR++NG+ +ID + E L LP L 
Sbjct: 3   LFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPGRPTGRFSNGRLIIDFIAEALGLPLLP 62

Query: 100 PPFADPSTKASKIVHGVNFASGGSGILDDTGSFLGHVYSLTEQINKFEEVTLPELEAELG 159
           PP+  P+   S  + GVNFASGG+GILD TG FLG V SL+ Q+  F+E     L A +G
Sbjct: 63  PPYLSPNGS-SDFLTGVNFASGGAGILDSTG-FLGSVISLSVQLEYFKE-YKERLRALVG 119

Query: 160 CN-STHLLSKYLFVVGVGGNDYTFNYFRPSLNGSTILDQGFASNLTNSLSQHLKKLYSLG 218
              +  +LSK LF++ +G NDY  NYF        +  + +   L +++S  +K+LY LG
Sbjct: 120 EEAAADILSKSLFLISIGSNDYLNNYFANPTRQYEV--EAYVPFLVSNISSAIKRLYDLG 177

Query: 219 GRKFVLMSLYPIGCIPMVKSFKPKQKF-CLRELNLGVRQFNTQLKSTADAIKEQMPGSNI 277
            RKFV+  L P+GC+P  ++        CL ELN   R FN +LK     ++ ++PG+  
Sbjct: 178 ARKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPGAKF 237

Query: 278 VIVNQYKIIMDIIKDPSSKGFKDAKRACCDLIPLSEGGNGVSCRKGGNVCGDRNAYVYFD 337
           V  + Y  ++D+I++P+  GF++  +ACC        G  +    G  VC D + YV++D
Sbjct: 238 VYADIYNALLDLIQNPAKYGFENTLKACCGTGGP--EGGLLCNPCGSTVCPDPSKYVFWD 295

Query: 338 GLHPTEAVNVHIANKAFSSY 357
           G+HPTEA N  IA+   S  
Sbjct: 296 GVHPTEAANRIIADALLSGP 315

The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315
>gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional Back     alignment and domain information
>gnl|CDD|238882 cd01846, fatty_acyltransferase_like, Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|225780 COG3240, COG3240, Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|238883 cd01847, Triacylglycerol_lipase_like, Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|216048 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydrolase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 373
PLN03156351 GDSL esterase/lipase; Provisional 100.0
cd01837315 SGNH_plant_lipase_like SGNH_plant_lipase_like, a p 100.0
cd01847281 Triacylglycerol_lipase_like Triacylglycerol lipase 100.0
PRK15381408 pathogenicity island 2 effector protein SseJ; Prov 100.0
cd01846270 fatty_acyltransferase_like Fatty acyltransferase-l 100.0
COG3240370 Phospholipase/lecithinase/hemolysin [Lipid metabol 100.0
PF00657234 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter 99.95
cd01839208 SGNH_arylesterase_like SGNH_hydrolase subfamily, s 99.57
cd01832185 SGNH_hydrolase_like_1 Members of the SGNH-hydrolas 99.53
cd01823259 SEST_like SEST_like. A family of secreted SGNH-hyd 99.5
cd01844177 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG 99.5
cd01836191 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee 99.49
cd01830204 XynE_like SGNH_hydrolase subfamily, similar to the 99.49
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 99.48
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 99.47
cd04501183 SGNH_hydrolase_like_4 Members of the SGNH-hydrolas 99.47
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 99.45
PRK10528191 multifunctional acyl-CoA thioesterase I and protea 99.43
cd04506204 SGNH_hydrolase_YpmR_like Members of the SGNH-hydro 99.41
cd01821198 Rhamnogalacturan_acetylesterase_like Rhamnogalactu 99.41
cd01825189 SGNH_hydrolase_peri1 SGNH_peri1; putative periplas 99.37
cd01822177 Lysophospholipase_L1_like Lysophospholipase L1-lik 99.34
cd01824288 Phospholipase_B_like Phospholipase-B_like. This su 99.33
cd01841174 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa 99.33
cd01835193 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG 99.31
PF13472179 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase fami 99.31
cd04502171 SGNH_hydrolase_like_7 Members of the SGNH-hydrolas 99.3
cd01820214 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A 99.3
cd00229187 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, 99.29
cd01828169 sialate_O-acetylesterase_like2 sialate_O-acetylest 99.28
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 99.25
cd01831169 Endoglucanase_E_like Endoglucanase E-like members 99.1
cd01833157 XynB_like SGNH_hydrolase subfamily, similar to Rum 99.08
KOG3035245 consensus Isoamyl acetate-hydrolyzing esterase [Li 98.88
cd01826305 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase l 98.8
PF14606178 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase fami 98.66
COG2755216 TesA Lysophospholipase L1 and related esterases [A 98.59
cd01840150 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SG 98.46
KOG3670397 consensus Phospholipase [Lipid transport and metab 98.2
COG2845354 Uncharacterized protein conserved in bacteria [Fun 96.36
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 95.13
PF08885251 GSCFA: GSCFA family; InterPro: IPR014982 This grou 93.05
PLN02757154 sirohydrochlorine ferrochelatase 82.71
>PLN03156 GDSL esterase/lipase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=8.2e-74  Score=556.23  Aligned_cols=341  Identities=33%  Similarity=0.587  Sum_probs=281.6

Q ss_pred             CcchhHHHHHHHHHHHHHhhhhccccccccCCcCCCccEEEEcCCccccCCCCcccccccccCCCCCCCCCCC-CCcccc
Q 047206            1 MEIKLLLLCLFPLASFFLQCNCHCAASKKKGTAASGIRGMFVFGSSLVDNGNNNFLQNKAKVNYLPYGIDFPY-GPSGRY   79 (373)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~P~g~~~~~-~~~gRf   79 (373)
                      |.|.|.+++.    .+.++|..+.+.+      ..++++|||||||++|+||++++.+..+++.||||++||+ .|+|||
T Consensus         1 ~~~~~~~~~~----~~~~~~~~~~~~~------~~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRf   70 (351)
T PLN03156          1 MQMHLFLIFF----LLLAQLLVLVAET------CAKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRF   70 (351)
T ss_pred             CCcchhhHHH----HHHHHHHHHHhcc------cCCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccc
Confidence            6676655432    2333444433332      3448999999999999999987765557789999999997 499999


Q ss_pred             cCCcchHHHHHhhcCCCCCCCCCCCCCCCCCCccCCcccccccccccCCCCCCcccccCHHHHHHHHHHHHHHHHHHHhC
Q 047206           80 TNGKNVIDLLGEQLQLPGLIPPFADPSTKASKIVHGVNFASGGSGILDDTGSFLGHVYSLTEQINKFEEVTLPELEAELG  159 (373)
Q Consensus        80 snG~~w~d~la~~lg~~~~~p~~~~~~~~~~~~~~g~NyA~gGA~~~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~~G  159 (373)
                      |||++|+||||+.||++..+|||++|..++.++.+|+|||+||+++.+.+.. .....+|..||++|.. +++++....|
T Consensus        71 SnGr~~~D~iA~~lGl~p~~ppyl~~~~~~~~~~~GvNFA~agag~~~~~~~-~~~~~~l~~Qv~~F~~-~~~~l~~~~g  148 (351)
T PLN03156         71 CNGRIAPDFISEAFGLKPAIPAYLDPSYNISDFATGVCFASAGTGYDNATSD-VLSVIPLWKELEYYKE-YQTKLRAYLG  148 (351)
T ss_pred             cCCChhhhhHHHHhCCCCCCCCCcCcccCchhhcccceeecCCccccCCCcc-ccCccCHHHHHHHHHH-HHHHHHHhhC
Confidence            9999999999999999434999999866667889999999999998765442 1235789999999998 8877766556


Q ss_pred             ccc-ccccCccEEEEEeccccccccccCCCCCCCccchHHHHHHHHHHHHHHHHHHHHcCCcEEEEccCCCCCccCCccc
Q 047206          160 CNS-THLLSKYLFVVGVGGNDYTFNYFRPSLNGSTILDQGFASNLTNSLSQHLKKLYSLGGRKFVLMSLYPIGCIPMVKS  238 (373)
Q Consensus       160 ~~~-~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v~~L~~~Gar~~vv~~lp~lg~~P~~~~  238 (373)
                      .++ ....+++||+||||+|||...+..........+++++++.+++.+.+.|++||++|||+|+|+|+||+||+|..+.
T Consensus       149 ~~~~~~~~~~sL~~i~iG~NDy~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~  228 (351)
T PLN03156        149 EEKANEIISEALYLISIGTNDFLENYYTFPGRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERT  228 (351)
T ss_pred             hHHHHHHHhcCeEEEEecchhHHHHhhccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHh
Confidence            433 4556899999999999998644322111123457889999999999999999999999999999999999998754


Q ss_pred             CCCCc-cchhHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEechHHHHHHHhCCCCCCCcccCccccCCcccCCCCCc
Q 047206          239 FKPKQ-KFCLRELNLGVRQFNTQLKSTADAIKEQMPGSNIVIVNQYKIIMDIIKDPSSKGFKDAKRACCDLIPLSEGGNG  317 (373)
Q Consensus       239 ~~~~~-~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~n~~  317 (373)
                      ....+ .+|.+.++.+++.||++|++++++|++++|+++|+++|+|.++.++++||++|||++++++||+.|.+   +..
T Consensus       229 ~~~~~~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~---~~~  305 (351)
T PLN03156        229 TNLMGGSECVEEYNDVALEFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMF---EMG  305 (351)
T ss_pred             hcCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCC---CCc
Confidence            32111 57999999999999999999999999999999999999999999999999999999999999998766   777


Q ss_pred             cccCCCC-CCCCCCCCceEeCCCChhHHHHHHHHHHHHcc
Q 047206          318 VSCRKGG-NVCGDRNAYVYFDGLHPTEAVNVHIANKAFSS  356 (373)
Q Consensus       318 ~~C~~~~-~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~  356 (373)
                      ..|++.. .+|++|++|+|||++|||+++|+++|+.++++
T Consensus       306 ~~C~~~~~~~C~~p~~yvfWD~~HPTe~a~~~iA~~~~~~  345 (351)
T PLN03156        306 YLCNRNNPFTCSDADKYVFWDSFHPTEKTNQIIANHVVKT  345 (351)
T ss_pred             cccCCCCCCccCCccceEEecCCCchHHHHHHHHHHHHHH
Confidence            7898655 58999999999999999999999999999987

>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional Back     alignment and domain information
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] Back     alignment and domain information
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A Back     alignment and domain information
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01823 SEST_like SEST_like Back     alignment and domain information
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases Back     alignment and domain information
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional Back     alignment and domain information
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01824 Phospholipase_B_like Phospholipase-B_like Back     alignment and domain information
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily Back     alignment and domain information
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A Back     alignment and domain information
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases Back     alignment and domain information
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases Back     alignment and domain information
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans Back     alignment and domain information
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB Back     alignment and domain information
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism] Back     alignment and domain information
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family Back     alignment and domain information
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B Back     alignment and domain information
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] Back     alignment and domain information
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>KOG3670 consensus Phospholipase [Lipid transport and metabolism] Back     alignment and domain information
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised Back     alignment and domain information
>PLN02757 sirohydrochlorine ferrochelatase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query373
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 1e-64
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-06
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 Back     alignment and structure
 Score =  216 bits (550), Expect = 1e-64
 Identities = 64/333 (19%), Positives = 99/333 (29%), Gaps = 23/333 (6%)

Query: 33  AASGIRGMFVFGSSLVDNGNNNFLQNKAKVNYLPYGIDFP-YGPSGRYTNGKNVIDLLGE 91
           A S    + VFG SL D G        A           P Y        G     LLG 
Sbjct: 11  APSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTYQNGSGEIFGPTAPMLLGN 70

Query: 92  QLQL-PGLIPPFADPSTKASKIVHGVNFASGGSGILDDTGSFLGHVYSLTEQINKFEEVT 150
           QL + PG +     P      I  G N+A GG        S      SL E+ N     +
Sbjct: 71  QLGIAPGDLAASTSPVNAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLR-S 129

Query: 151 LPELEAELGCNSTHLLSKYLFVVGVGGNDYTFNYFRPSLNGSTILDQGFASNLTNSLSQH 210
                 +            L+ +  GGND+        +          A      L   
Sbjct: 130 RDGYLVDRARQGLGADPNALYYITGGGNDFLQGRILNDVQ---------AQQAAGRLVDS 180

Query: 211 LKKLYSLGGRKFVLMSLYPIGCIPMVKSFKPKQKFCLRELNLGVRQFNTQLKSTADAIKE 270
           ++ L   G R  V+  L  +G  P                +     FN +L +       
Sbjct: 181 VQALQQAGARYIVVWLLPDLGLTPATFGGP-----LQPFASQLSGTFNAELTAQLSQ--- 232

Query: 271 QMPGSNIVIVNQYKIIMDIIKDPSSKGFKDAKRACCDLIPLSEGGNGVSCRKGGNVCGDR 330
              G+N++ +N   ++ + + +P+S G    +           G              D 
Sbjct: 233 --AGANVIPLNIPLLLKEGMANPASFGLAADQNLIGT-CFSGNGCTMNPTYGINGSTPDP 289

Query: 331 NAYVYFDGLHPTEAVNVHIANKAFSSYLKNEVY 363
           +  ++ D +HPT      IA+  +S        
Sbjct: 290 SKLLFNDSVHPTITGQRLIADYTYSLLSAPWEL 322
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query373
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 100.0
3mil_A240 Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola 99.74
3rjt_A216 Lipolytic protein G-D-S-L family; PSI-biology, mid 99.64
2q0q_A216 ARYL esterase; SGNH hydrolase, oligomeric enzyme, 99.6
3dci_A232 Arylesterase; SGNH_hydrolase SUBF structural genom 99.57
1yzf_A195 Lipase/acylhydrolase; structural GENO PSI, protein 99.54
1vjg_A218 Putative lipase from the G-D-S-L family; structura 99.52
2hsj_A214 Putative platelet activating factor; structr genom 99.51
1ivn_A190 Thioesterase I; hydrolase, protease; 1.90A {Escher 99.47
3p94_A204 GDSL-like lipase; serine hydrolase, catalytic tria 99.46
1esc_A306 Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. 99.44
2vpt_A215 Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos 99.43
4hf7_A209 Putative acylhydrolase; PF13472 family, structural 99.42
3dc7_A232 Putative uncharacterized protein LP_3323; NESG LPR 99.42
1fxw_F229 Alpha2, platelet-activating factor acetylhydrolase 99.38
3skv_A385 SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydr 99.35
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 99.34
3bzw_A274 Putative lipase; protein structure initiative II, 99.31
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 99.29
1es9_A232 PAF-AH, platelet-activating factor acetylhydrolase 99.29
1k7c_A233 Rhamnogalacturonan acetylesterase; N-linked glycos 99.25
2o14_A375 Hypothetical protein YXIM; NESG, X-RAY, SR595, str 99.2
2wao_A341 Endoglucanase E; plant cell WALL degradation, carb 99.11
2w9x_A366 AXE2A, CJCE2B, putative acetyl xylan esterase; car 98.98
2waa_A347 Acetyl esterase, xylan esterase, putative, AXE2C; 98.94
4i8i_A271 Hypothetical protein; 5-stranded beta sheet flanke 90.89
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Back     alignment and structure
Probab=100.00  E-value=6e-59  Score=485.29  Aligned_cols=306  Identities=21%  Similarity=0.246  Sum_probs=240.4

Q ss_pred             cccCCcCCCccEEEEcCCccccCCCCccccccc----ccCCCCCCCCCCCCCccccc-CCcchHHHHHhhcCCCC-CCCC
Q 047206           28 KKKGTAASGIRGMFVFGSSLVDNGNNNFLQNKA----KVNYLPYGIDFPYGPSGRYT-NGKNVIDLLGEQLQLPG-LIPP  101 (373)
Q Consensus        28 ~~~~~~~~~~~~l~vFGDSlsD~Gn~~~~~~~~----~~~~~P~g~~~~~~~~gRfs-nG~~w~d~la~~lg~~~-~~p~  101 (373)
                      ++.-..+++|++||+||||||||||........    +... |.|.+|   ++|||| ||++|+||||+.||+|. .++|
T Consensus         6 ~~~~~~~~~~~~i~~FGDS~sDtGn~~~~~~~~~~~~~~~~-~~g~~~---~~Gr~s~~G~~~~D~ia~~lgl~~~~l~p   81 (632)
T 3kvn_X            6 HHHLEAPSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTN-RVGPTY---QNGSGEIFGPTAPMLLGNQLGIAPGDLAA   81 (632)
T ss_dssp             CCTTSCCCCCSCEEEECSTTTCCSCSBCTTSSTTCBCCSSC-BCSSSC---CTTSSCCBCCCHHHHHHHHTTCCGGGGSB
T ss_pred             cccccCCCCCccEEEEccccccCCCcccccCCcCCcccccc-CCCCcc---ccCcccccCCchHHHHHHHcCCCccccCc
Confidence            345566789999999999999999986432110    1111 226555   589999 99999999999999982 1345


Q ss_pred             CCCCCCCCCCccCCccccccccccc---CCCCCCcccccCHHHHHHHHH-HHHHHHHHHHhCcccccccCccEEEEEecc
Q 047206          102 FADPSTKASKIVHGVNFASGGSGIL---DDTGSFLGHVYSLTEQINKFE-EVTLPELEAELGCNSTHLLSKYLFVVGVGG  177 (373)
Q Consensus       102 ~~~~~~~~~~~~~g~NyA~gGA~~~---~~~~~~~~~~~~l~~Qi~~f~-~~~~~~~~~~~G~~~~~~~~~sL~~i~iG~  177 (373)
                      |+.+...+.++.+|+|||+|||++.   +........++++..||.+|+ . +++++... +   .+..+++||+||||+
T Consensus        82 ~~~~~~~~~~~~~G~NfA~gGa~~~~~l~~~~~~~~~~~~l~~ql~~~~~~-~l~~~~~~-~---~~~~~~sL~~v~iG~  156 (632)
T 3kvn_X           82 STSPVNAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDG-YLVDRARQ-G---LGADPNALYYITGGG  156 (632)
T ss_dssp             SSCHHHHHHTCCCCSBCCCTTCCHHHHHHHHHSTTCEEEEETTEEEEEECC-HHHHHHTT-T---CCCCTTSEEEECCSH
T ss_pred             cccccccccccccCceEeeccccccccccccccccccccccchhHHHHHHH-HHHHHhhc-c---CccCCCCEEEEEEec
Confidence            5442222567889999999999962   221111223455556665554 3 33322110 1   457899999999999


Q ss_pred             ccccccccCCCCCCCccchHHHHHHHHHHHHHHHHHHHHcCCcEEEEccCCCCCccCCcccCCCCccchhHHHHHHHHHH
Q 047206          178 NDYTFNYFRPSLNGSTILDQGFASNLTNSLSQHLKKLYSLGGRKFVLMSLYPIGCIPMVKSFKPKQKFCLRELNLGVRQF  257 (373)
Q Consensus       178 ND~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v~~L~~~Gar~~vv~~lp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~  257 (373)
                      |||+..+..         ..++++.+++++..+|++|+++|||+|+|+++||+||+|...  .   .+|.+.++++++.|
T Consensus       157 ND~~~~~~~---------~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~~pp~gc~P~~~--~---~~c~~~~n~~~~~~  222 (632)
T 3kvn_X          157 NDFLQGRIL---------NDVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTPATF--G---GPLQPFASQLSGTF  222 (632)
T ss_dssp             HHHHTTCCC---------SHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCCGGGSTTTT--T---STTHHHHHHHHHHH
T ss_pred             hhhhccccc---------ChHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccc--C---CCchHHHHHHHHHH
Confidence            999865432         136788999999999999999999999999999999999963  2   47999999999999


Q ss_pred             HHHHHHHHHHHHhhCCCCeEEEEechHHHHHHHhCCCCCCCcccC--ccccCCcccCCCCCccccCCC-----CCCCCCC
Q 047206          258 NTQLKSTADAIKEQMPGSNIVIVNQYKIIMDIIKDPSSKGFKDAK--RACCDLIPLSEGGNGVSCRKG-----GNVCGDR  330 (373)
Q Consensus       258 N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~--~~Cc~~~~~~~~n~~~~C~~~-----~~~C~~p  330 (373)
                      |++|++++++|+     .+|+++|+|.++.++++||++|||++++  ++||+.+.        .|++.     ..+|+||
T Consensus       223 N~~L~~~l~~l~-----~~i~~~D~y~~~~~~~~np~~yGf~~~~~~~~cCg~g~--------~C~~~~~~~~~~~C~~~  289 (632)
T 3kvn_X          223 NAELTAQLSQAG-----ANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGN--------GCTMNPTYGINGSTPDP  289 (632)
T ss_dssp             HHHHHHHHHHHC-----CCEEEECHHHHHHHHHHCGGGGTCCTTSCTTTCBSSCT--------TSCBCTTTSTTSSSCCG
T ss_pred             HHHHHHHHHhCC-----CeEEEEEcHHHHHHHHhCHHhcCCCcCCCCccccCCCC--------ccCCcccccccccCCCc
Confidence            999999999995     4799999999999999999999999875  69998652        57753     4689999


Q ss_pred             CCceEeCCCChhHHHHHHHHHHHHccCCCCcccCCChhhhhcC
Q 047206          331 NAYVYFDGLHPTEAVNVHIANKAFSSYLKNEVYPINVSQLAKL  373 (373)
Q Consensus       331 ~~ylfwD~vHPT~~~h~~iA~~~~~~~~~~~~~p~~~~~l~~~  373 (373)
                      ++|+|||++|||+++|++||+.+++.    ++.|+++++|+++
T Consensus       290 ~~y~fwD~~HpTe~~~~~ia~~~~~~----~~~P~~~~~l~~~  328 (632)
T 3kvn_X          290 SKLLFNDSVHPTITGQRLIADYTYSL----LSAPWELTLLPEM  328 (632)
T ss_dssp             GGCSBSSSSCBCHHHHHHHHHHHHHH----HHTHHHHTTHHHH
T ss_pred             cceEEecCCCCHHHHHHHHHHHHHhc----cCCCccHHHHHHH
Confidence            99999999999999999999999998    7899999999863
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* Back     alignment and structure
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Back     alignment and structure
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 Back     alignment and structure
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A Back     alignment and structure
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 Back     alignment and structure
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* Back     alignment and structure
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} Back     alignment and structure
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A Back     alignment and structure
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} Back     alignment and structure
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 Back     alignment and structure
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A Back     alignment and structure
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP} Back     alignment and structure
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 Back     alignment and structure
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A* Back     alignment and structure
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A* Back     alignment and structure
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 Back     alignment and structure
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* Back     alignment and structure
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus} Back     alignment and structure
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus} Back     alignment and structure
>4i8i_A Hypothetical protein; 5-stranded beta sheet flanked by 8 helices fold, structural joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides uniformis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query373
d1esca_302 Esterase {Streptomyces scabies [TaxId: 1930]} 99.68
d1k7ca_233 Rhamnogalacturonan acetylesterase {Fungus (Aspergi 99.52
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 99.48
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 99.45
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 99.42
d1yzfa1195 Lipase/acylhydrolase {Enterococcus faecalis [TaxId 99.31
d2hsja1211 Uncharacterized protein SP1450 {Streptococcus pneu 99.26
d1fxwf_212 Platelet-activating factor acetylhydrolase {Cow (B 99.22
d1jrla_179 Thioesterase I, TAP {Escherichia coli [TaxId: 562] 99.2
d1es9a_212 Platelet-activating factor acetylhydrolase {Cow (B 99.18
d1vjga_201 Hypothetical protein alr1529 {Nostoc sp. pcc 7120 99.05
>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: Esterase
domain: Esterase
species: Streptomyces scabies [TaxId: 1930]

Probab=99.68  E-value=3.5e-17  Score=151.66  Aligned_cols=249  Identities=17%  Similarity=0.034  Sum_probs=134.4

Q ss_pred             EEEEcCCccccCCCCcccccccccCCCCCCCCCCCCCcccccCCcchHHHHHhhcCCCCCCCCCCCCCCCCCCccCCccc
Q 047206           39 GMFVFGSSLVDNGNNNFLQNKAKVNYLPYGIDFPYGPSGRYTNGKNVIDLLGEQLQLPGLIPPFADPSTKASKIVHGVNF  118 (373)
Q Consensus        39 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~P~g~~~~~~~~gRfsnG~~w~d~la~~lg~~~~~p~~~~~~~~~~~~~~g~Ny  118 (373)
                      .+|+||||++-.....          ++.+......+..|  .+..|+++|++.++... ..           ...-.||
T Consensus         4 ~~V~lGDS~tag~g~~----------~~~~~~~~~~~C~r--s~~~y~~~la~~l~~~~-~~-----------~~~~~n~   59 (302)
T d1esca_           4 PTVFFGDSYTANFGIA----------PVTNQDSERGWCFQ--AKENYPAVATRSLADKG-IT-----------LDVQADV   59 (302)
T ss_dssp             EEEECCSHHHHTTTCS----------SBTTTTSGGGGGTC--BTTCHHHHHHHHHHTTT-CE-----------EEEEEEC
T ss_pred             CEEEecchhccCCCCC----------cccCCCCCCCcccC--CCcCHHHHHHHHhcccc-CC-----------ceeEEEe
Confidence            6899999998433221          00110100012222  36789999999998764 11           1123699


Q ss_pred             ccccccccCCCCCCc--ccccCHHHHHHHHHHHHHHHHHHHhCcccccccCccEEEEEeccccccccccC---------C
Q 047206          119 ASGGSGILDDTGSFL--GHVYSLTEQINKFEEVTLPELEAELGCNSTHLLSKYLFVVGVGGNDYTFNYFR---------P  187 (373)
Q Consensus       119 A~gGA~~~~~~~~~~--~~~~~l~~Qi~~f~~~~~~~~~~~~G~~~~~~~~~sL~~i~iG~ND~~~~~~~---------~  187 (373)
                      |.+|+++.+......  ........|++                  ......+|++|+||+||+......         .
T Consensus        60 a~sGatt~~~~~~~~~~~~~~~~~~Q~~------------------~l~~~~dlVtl~iGgND~~~~~~~~~~~~~~~~~  121 (302)
T d1esca_          60 SCGGALIHHFWEKQELPFGAGELPPQQD------------------ALKQDTQLTVGSLGGNTLGFNRILKQCSDELRKP  121 (302)
T ss_dssp             CCTTCCGGGGTSCEECGGGCCEECCGGG------------------GCCTTCCEEEECCCHHHHTHHHHHHHTCTTTTSS
T ss_pred             eecccchhhhhccccccccccchhhhhh------------------hccCCCCEEEEecCCcccchhhhhhhhhhccccc
Confidence            999999865433210  00011111221                  112345899999999997421000         0


Q ss_pred             -CC-------CCC---------ccc----hHHHHHHHHHHHHHHHHHHHHcC-CcEEEEccCCCCCcc---CCcccC---
Q 047206          188 -SL-------NGS---------TIL----DQGFASNLTNSLSQHLKKLYSLG-GRKFVLMSLYPIGCI---PMVKSF---  239 (373)
Q Consensus       188 -~~-------~~~---------~~~----~~~~~~~~v~~i~~~v~~L~~~G-ar~~vv~~lp~lg~~---P~~~~~---  239 (373)
                       ..       ...         ...    ....++.+..++...++++.+.. --+|++++.|++...   +.....   
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~p~a~iv~~~y~~~~~~~~~~~~~~~~~~  201 (302)
T d1esca_         122 SLLPGDPVDGDEPAAKCGEFFGTGDGKQWLDDQFERVGAELEELLDRIGYFAPDAKRVLVGYPRLVPEDTTKCLTAAPGQ  201 (302)
T ss_dssp             CSSCCCCSSTTSCGGGHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEECCCCCSCSCGGGGGSCCTTC
T ss_pred             cccccccccccccccccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHCCCCeEEEecCcccccccCCccccccccc
Confidence             00       000         001    12234445555666666666543 337888888864310   000000   


Q ss_pred             C--C---CccchhHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEechHHHHHHHhCCCCCCCcccCccccCCcccCCC
Q 047206          240 K--P---KQKFCLRELNLGVRQFNTQLKSTADAIKEQMPGSNIVIVNQYKIIMDIIKDPSSKGFKDAKRACCDLIPLSEG  314 (373)
Q Consensus       240 ~--~---~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~~~~~~Cc~~~~~~~~  314 (373)
                      .  .   ........++.+.+.+|+.+++...+       ..+.++|++..|.       .+++-...++|...      
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~n~~i~~~A~~-------~~v~~vd~~~~f~-------~~~~c~~~~~~~~~------  261 (302)
T d1esca_         202 TQLPFADIPQDALPVLDQIQKRLNDAMKKAAAD-------GGADFVDLYAGTG-------ANTACDGADRGIGG------  261 (302)
T ss_dssp             SSCTTTTCCTTTHHHHHHHHHHHHHHHHHHHHT-------TTCEEECTGGGCT-------TSSTTSTTSCSBCC------
T ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHHHHHH-------cCCEEEechhhhc-------cccccccccccccc------
Confidence            0  0   00234567778888899888775432       3478899988753       11111111111110      


Q ss_pred             CCccccCCCCCCCCCCCCceEeCCCChhHHHHHHHHHHHHcc
Q 047206          315 GNGVSCRKGGNVCGDRNAYVYFDGLHPTEAVNVHIANKAFSS  356 (373)
Q Consensus       315 n~~~~C~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~  356 (373)
                             .......++..+++||.+|||++||++||+.+.+.
T Consensus       262 -------~~~~~~~~~~~~~~~d~~HPn~~G~~~iA~~i~~~  296 (302)
T d1esca_         262 -------LLEDSQLELLGTKIPWYAHPNDKGRDIQAKQVADK  296 (302)
T ss_dssp             -------SSSEEEEESSSCEEECSSCBCHHHHHHHHHHHHHH
T ss_pred             -------cccccccccccccccCCcCCCHHHHHHHHHHHHHH
Confidence                   01111235678999999999999999999999886
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]} Back     information, alignment and structure
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} Back     information, alignment and structure
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} Back     information, alignment and structure