Citrus Sinensis ID: 047282

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------
Protein Sequence
MYLLRSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSSLEMDDETTNPVSNPKRRRKNITALVVRLSLGGGKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPYGGEATGSNPGISKSTRFKN
Secondary Structure (PSIPRED)
cEEEEEEcccccEEEEEEEEEccccEEEEEEEEcccccccccEEEEEEcccccccccEEEEEEEcccccEEEEEEEEEEEccccccccccccccccccccccEEEEEEEEEEccccEEccccEEEEEEEEEEEccEEEEEcEEEEEccccccccccEEEEEccccccccccEEEcccccEEEEEEEc
Secondary Structure Prediction (SSPRO)
cEEEEEEcccccEEEEEEEEEccccEEEEEEEccccccccccEEEEEccHHHHcccEEEEEEEEEEcccEEEEEEEEEEEEccccccccccccccccccccccEEEEEEEcccccEEEcccccHHHHHcHHHccHHHHccccEEEEccEEEEEccccEEcccccccccccccccccccccEEEEEcc
Coil and Loop (DISEMBL)
myllrsdvksgrrnEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHlpefvtfgfsmetgvdFTIFSIYLWEfnsslemddettnpvsnpkrrrKNITALVVRLSlgggklgqggfggvdkgflRETNSFFSNWNVQLKHGKAVALCKGLfrdirnptgpyggeatgsnpgiskstrfkn
Flexible Loop (DISEMBL)
myllrsdvksgrrneAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNsslemddettnpvsnpkrrrknITALVVRlslgggklgqggfGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIrnptgpyggeatgsnpgiskstrfkn
Low Complexity Region (SEG)
MYLLRSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSSLEMDDETTNPVSNPKRRRKNITALVVRlslgggklgqggfggvdkgflRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPYGGEATGSNPGISKSTRFKN
Disordered region (IsUnstruct)
***************AWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNS********************NITALVVRLSLGGGKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIR*************************
Disordered Region (DISOPRED)
MYLLRSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSSL***********************VVRLSLGGGKLGQGGFGGVDKGFLRETNSF***********************************TGSNPGIS*S*RFK*
Disordered Region (DISEMBL)
MYLLRSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSSLEM************RRRKNITALVVRLSLGGGKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPYGGEATGSNPGISKSTRFKN
Disordered Region (DISPRO)
MYLLRSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSSLEMD*************RKNITALVVRLSLGGGKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPYGGEATGSNPGISKSTRFKN
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MYLLRSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSSLEMDDETTNPVSNPKRRRKNITALVVRLSLGGGKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPYGGEATGSNPGISKSTRFKN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	187	2.2.26 [Sep-21-2011]
Q39528	293	Agglutinin-1 OS=Cladrasti	N/A	no	0.390	0.249	0.394	2e-05
Q39529	290	Agglutinin-2 OS=Cladrasti	N/A	no	0.411	0.265	0.389	0.0001
Q93WH6	275	Lectin OS=Lens culinaris	N/A	no	0.417	0.283	0.308	0.0001
P02870	275	Lectin OS=Lens culinaris	N/A	no	0.417	0.283	0.308	0.0001
Q8VXF2	275	Lectin OS=Lens culinaris	N/A	no	0.417	0.283	0.308	0.0001
Q93X49	275	Lectin OS=Lens culinaris	N/A	no	0.417	0.283	0.308	0.0001
P81637	237	Lectin alpha chain OS=Dio	N/A	no	0.406	0.320	0.373	0.0003
P58907	237	Lectin alpha chain OS=Dio	N/A	no	0.406	0.320	0.373	0.0003
Q9LXA5	651	L-type lectin-domain cont	no	no	0.481	0.138	0.313	0.0006
P16349	244	Lectin OS=Lathyrus sphaer	N/A	no	0.358	0.274	0.362	0.0007

>sp|Q39528|LEC1_CLAKE Agglutinin-1 OS=Cladrastis kentukea PE=1 SV=1

 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 3/76 (3%)

Query: 9   KSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGV 68
           ++G +  A ISYN ++  L+ A T + N++ +   LD  +DL+  LPE+V  GFS  TG 
Sbjct: 205 QNGVKATAQISYNPASQKLT-AVTSYPNSTPLTVSLD--IDLQTVLPEWVRVGFSASTGQ 261

Query: 69  DFTIFSIYLWEFNSSL 84
           +    SI  W F+SSL
Sbjct: 262 NVERNSILAWSFSSSL 277

Bark lectins are storage proteins that probably maintain stocks of nitrogen during dormant period. Self-aggregatable molecules that can bind their own carbohydrate side chains. They could also play a role in the plant's defense against phytophagous invertebrates or herbivorous higher animals.
Cladrastis kentukea (taxid: 38412)

>sp|Q39529|LEC2_CLAKE Agglutinin-2 OS=Cladrastis kentukea PE=1 SV=1

 Score = 46.6 bits (109), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 40/77 (51%)

Query: 9   KSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGV 68
           ++G    A ISYNS T  LSV  +     +     + Y VDL+  LPE+V  GFS  TG 
Sbjct: 199 ENGSLATAQISYNSDTKKLSVVSSYPNTQANEDYTVSYDVDLKTELPEWVRVGFSGSTGG 258

Query: 69  DFTIFSIYLWEFNSSLE 85
                +I  W FNS+L+
Sbjct: 259 YVQNHNILSWTFNSNLQ 275

Bark lectins are storage proteins that probably maintain stocks of nitrogen during dormant period. Self-aggregatable molecules that can bind their own carbohydrate side chains. They could also play a role in the plant's defense against phytophagous invertebrates or herbivorous higher animals.

Cladrastis kentukea (taxid: 38412)

>sp|Q93WH6|LEC_LENCC Lectin OS=Lens culinaris subsp. culinaris PE=3 SV=2

 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 3/81 (3%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFT---GFRNNSVVMQGLDYQVDLRQHLPEFVTFGFS 63
           ++++G R    I++N++T+ L+V  T        +V    L+  V L+  +PE+V  GFS
Sbjct: 183 NLQNGERANVVIAFNAATNVLTVTLTYPNSLEEENVTSYTLNEVVPLKDVVPEWVRIGFS 242

Query: 64  METGVDFTIFSIYLWEFNSSL 84
             TG +F    ++ W F+S L
Sbjct: 243 ATTGAEFAAHEVHSWSFHSEL 263

D-mannose specific lectin.

Lens culinaris subsp. culinaris (taxid: 362247)

>sp|P02870|LEC_LENCU Lectin OS=Lens culinaris PE=1 SV=2

 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 3/81 (3%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFT---GFRNNSVVMQGLDYQVDLRQHLPEFVTFGFS 63
           ++++G R    I++N++T+ L+V  T        +V    L+  V L+  +PE+V  GFS
Sbjct: 183 NLQNGERANVVIAFNAATNVLTVTLTYPNSLEEENVTSYTLNEVVPLKDVVPEWVRIGFS 242

Query: 64  METGVDFTIFSIYLWEFNSSL 84
             TG +F    ++ W F+S L
Sbjct: 243 ATTGAEFAAHEVHSWSFHSEL 263

D-mannose specific lectin.

Lens culinaris (taxid: 3864)

>sp|Q8VXF2|LEC_LENCT Lectin OS=Lens culinaris subsp. tomentosus PE=3 SV=2

 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 3/81 (3%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFT---GFRNNSVVMQGLDYQVDLRQHLPEFVTFGFS 63
           ++++G R    I++N++T+ L+V  T        +V    L+  V L+  +PE+V  GFS
Sbjct: 183 NLQNGERANVVIAFNAATNVLTVTLTYPNSLEEENVTSYTLNEVVPLKDVVPEWVRIGFS 242

Query: 64  METGVDFTIFSIYLWEFNSSL 84
             TG +F    ++ W F+S L
Sbjct: 243 ATTGAEFAAHEVHSWSFHSEL 263

D-mannose specific lectin.

Lens culinaris subsp. tomentosus (taxid: 175770)

>sp|Q93X49|LEC_LENCO Lectin OS=Lens culinaris subsp. orientalis PE=3 SV=2

 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 3/81 (3%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFT---GFRNNSVVMQGLDYQVDLRQHLPEFVTFGFS 63
           ++++G R    I++N++T+ L+V  T        +V    L+  V L+  +PE+V  GFS
Sbjct: 183 NLQNGERANVVIAFNAATNVLTVTLTYPNSLEEENVTSYTLNEVVPLKDVVPEWVRIGFS 242

Query: 64  METGVDFTIFSIYLWEFNSSL 84
             TG +F    ++ W F+S L
Sbjct: 243 ATTGAEFAAHEVHSWSFHSEL 263

D-mannose specific lectin.

Lens culinaris subsp. orientalis (taxid: 129392)

>sp|P81637|LECA_DIOGU Lectin alpha chain OS=Dioclea guianensis PE=1 SV=1

 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 7/83 (8%)

Query: 5   RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
           R ++++G+   A ISYNS    LS  V++TG  + +V      Y VDL   LPE+V  G 
Sbjct: 39  RWNMQTGKVGTAHISYNSVAKRLSAVVSYTGSSSTTV-----SYDVDLNNVLPEWVRVGL 93

Query: 63  SMETGVDFTIFSIYLWEFNSSLE 85
           S  TG+     +I  W F S L+
Sbjct: 94  SATTGLYKETNTILSWSFTSKLK 116

D-mannose/D-glucose-binding lectin. Has anti-inflammatory activity in rats. Induces histamine release in mast cells from rat. Induces lymphocyte proliferation and IFNG production.

Dioclea guianensis (taxid: 99571)

>sp|P58907|LECA_DIOVI Lectin alpha chain OS=Dioclea virgata PE=1 SV=2

 Score = 45.1 bits (105), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 7/83 (8%)

Query: 5   RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
           R ++++G+   A ISYNS    LS  V++TG  + +V      Y VDL   LPE+V  G 
Sbjct: 39  RWNMQTGKVGTAHISYNSVAKRLSAVVSYTGSSSTTV-----SYDVDLNNVLPEWVRVGL 93

Query: 63  SMETGVDFTIFSIYLWEFNSSLE 85
           S  TG+     +I  W F S L+
Sbjct: 94  SATTGLYKETNTILSWSFTSKLK 116

D-mannose/D-glucose-binding lectin. Has anti-inflammatory activity in rats. Induces histamine release in mast cells from hamster and rat. Induces lymphocyte proliferation and IFNG production. Shows toxicity against the aquatic snail B.glabrata at concentrations higher than 20 ug/ml.

Dioclea virgata (taxid: 167618)

>sp|Q9LXA5|LRK91_ARATH L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1

 Score = 43.9 bits (102), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 9/99 (9%)

Query: 18  ISYNSSTHNLSVAFT-GFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIY 76
           I Y+S+  NLSV++T    ++ +    L Y +DL + LP  VT GFS  +G       + 
Sbjct: 187 IFYDSARRNLSVSWTYDLTSDPLENSSLSYIIDLSKVLPSEVTIGFSATSGGVTEGNRLL 246

Query: 77  LWEFNSSLEMDDETTNPVSNPKRRRKNITALVVRLSLGG 115
            WEF+SSLE+ D         K+ + +   +++ +S+ G
Sbjct: 247 SWEFSSSLELID--------IKKSQNDKKGMIIGISVSG 277

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P16349|LEC_LATSP Lectin OS=Lathyrus sphaericus PE=1 SV=1

 Score = 43.5 bits (101), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 2/69 (2%)

Query: 16  AWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSI 75
           A+I+Y ++T+ L V  T    NS     L   VDL+Q +PE+V  G S  T   ++   +
Sbjct: 171 AYIAYKAATNELDVTVT--YPNSRDYATLREVVDLKQIVPEWVRVGLSASTATYYSAHEV 228

Query: 76  YLWEFNSSL 84
           Y W F+S L
Sbjct: 229 YSWSFHSEL 237

Lathyrus sphaericus (taxid: 3861)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	187
224092745	681	predicted protein [Populus trichocarpa]	0.711	0.195	0.407	6e-24
224096774	713	predicted protein [Populus trichocarpa]	0.491	0.129	0.589	2e-23
225470605	720	PREDICTED: L-type lectin-domain containi	0.652	0.169	0.492	3e-23
356527993	709	PREDICTED: L-type lectin-domain containi	0.679	0.179	0.446	5e-23
356527997	709	PREDICTED: L-type lectin-domain containi	0.700	0.184	0.423	1e-21
224059892	613	predicted protein [Populus trichocarpa]	0.475	0.145	0.561	2e-21
449479047	697	PREDICTED: L-type lectin-domain containi	0.727	0.195	0.356	3e-21
296088135	546	unnamed protein product [Vitis vinifera]	0.534	0.183	0.532	1e-20
449479044	678	PREDICTED: L-type lectin-domain containi	0.486	0.134	0.510	3e-20
449438590	665	PREDICTED: LOW QUALITY PROTEIN: L-type l	0.486	0.136	0.510	3e-20

>gi|224092745|ref|XP_002334872.1| predicted protein [Populus trichocarpa] gi|222831889|gb|EEE70366.1| predicted protein [Populus trichocarpa]

 Score =  115 bits (289), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/184 (40%), Positives = 91/184 (49%), Gaps = 51/184 (27%)

Query: 6   SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSME 65
            D++ GRR EAWISYNSSTHNLSVAFTG+RNN+V MQ L   V LR +LPE V+FGFS  
Sbjct: 182 CDIRRGRRTEAWISYNSSTHNLSVAFTGYRNNTVEMQFLSQIVSLRDYLPERVSFGFSAS 241

Query: 66  TGVDFTIFSIYLWEFNSSLE---------------------------------------- 85
           TG  F I ++Y W+F+SSLE                                        
Sbjct: 242 TGDLFAIHTLYSWDFSSSLEIDDNNRTGLAVGLGVGGGAIVVGAALVGFVIKFMCGHEED 301

Query: 86  ----------MDDETTNPVSNPKRRRKNITALVVRLSLGGGKLGQGGFGGVDKGFLRETN 135
                     MDDE     + PK+      A          KLG+GGFGGV KGFL+E +
Sbjct: 302 EEGGHVLEEYMDDEFERG-TGPKKFSYQELARATSNFKDEEKLGEGGFGGVYKGFLKEID 360

Query: 136 SFFS 139
           SF +
Sbjct: 361 SFVA 364

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224096774|ref|XP_002334671.1| predicted protein [Populus trichocarpa] gi|222874064|gb|EEF11195.1| predicted protein [Populus trichocarpa]

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/95 (58%), Positives = 69/95 (72%), Gaps = 3/95 (3%)

Query: 6   SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSME 65
            D+  GR  EAWISYNSSTHNLSVAFTG+RNN+V MQ L   V LR +LPE V+FGFS  
Sbjct: 184 CDISGGRITEAWISYNSSTHNLSVAFTGYRNNTVEMQFLSQIVSLRDYLPERVSFGFSAS 243

Query: 66  TGVDFTIFSIYLWEFNSSLEMDDETTNPV---SNP 97
           TG    + ++Y W+F+SSLE+DD  TNP+   +NP
Sbjct: 244 TGSASALHTLYSWDFSSSLEIDDNVTNPIDPATNP 278

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225470605|ref|XP_002262748.1| PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Vitis vinifera]

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/138 (49%), Positives = 87/138 (63%), Gaps = 16/138 (11%)

Query: 8   VKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQ-GLDYQVDLRQHLPEFVTFGFSMET 66
           + +GRRN+AWISYNSS+ NLSV FTGFRN+S ++Q  L Y+VDLR +LPE+V+FGFS  T
Sbjct: 203 IINGRRNDAWISYNSSSKNLSVVFTGFRNDSTILQDNLYYEVDLRLYLPEWVSFGFSGAT 262

Query: 67  GVDFTIFSIYLWEFNSSLEMDDETTNPV------------SNPKRRRKNITALVVRLSLG 114
           G    I +IY W F+SSL+ D+  TNP             SNP R+ K    LVV L++G
Sbjct: 263 GNASAIHAIYSWSFSSSLQTDENKTNPTSPEAETPTSNPNSNPSRKIK--VKLVVGLTVG 320

Query: 115 GGKLGQGGFGGVDKGFLR 132
           G     GG   V   FL+
Sbjct: 321 GCAF-VGGLSLVLFLFLK 337

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527993|ref|XP_003532590.1| PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Glycine max]

 Score =  112 bits (281), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 62/139 (44%), Positives = 85/139 (61%), Gaps = 12/139 (8%)

Query: 6   SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSME 65
           +D+K G+ NE WISYNSS+ NLSV FTGF N++++ Q L    DLR HLPEFVT GFS  
Sbjct: 191 ADIKQGKLNEVWISYNSSSFNLSVVFTGFNNDTILRQHLSAITDLRLHLPEFVTVGFSAA 250

Query: 66  TGVDFTIFSIYLWEFNSSLEMDDETTN--------PVSN---PKRRRKNITALVVRLSLG 114
           TG+D  I S+  W+F+S+L   +  T         P ++   P +++KN T L V LS+G
Sbjct: 251 TGIDTAIHSVNSWDFSSTLAAQENITKGADTVARYPATSNIAPSQKKKNKTGLAVGLSIG 310

Query: 115 GGKLGQGGFGGVDKGFLRE 133
           G  L  GG G +  G  ++
Sbjct: 311 GFVL-IGGLGLISIGLWKK 328

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527997|ref|XP_003532592.1| PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Glycine max]

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/151 (42%), Positives = 88/151 (58%), Gaps = 20/151 (13%)

Query: 6   SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSME 65
           +D+K G+ NE WISYNSS+ NLSV FTGF N++++ Q L   +DLR HLPEFVT GFS  
Sbjct: 191 ADIKQGKLNEVWISYNSSSFNLSVVFTGFNNDTILRQHLSAIIDLRLHLPEFVTVGFSAA 250

Query: 66  TGVDFTIFSIYLWEFNSSLEMDDETT--------NPVSN---PKRRRKNITALVVRLSLG 114
           TG    I S+  W+F+S+L   +  T        +P ++   P +++KN T L V LS+G
Sbjct: 251 TGSSTAIHSVNSWDFSSTLAAQENITKGADTVARSPATSNIAPSQKKKNKTGLAVGLSIG 310

Query: 115 GGKLGQGGFGGVD--------KGFLRETNSF 137
           G  L  GG G +         KG + E + F
Sbjct: 311 GFVL-IGGLGLISICLWKKWKKGSVEEVHVF 340

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224059892|ref|XP_002300009.1| predicted protein [Populus trichocarpa] gi|222847267|gb|EEE84814.1| predicted protein [Populus trichocarpa]

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/89 (56%), Positives = 66/89 (74%)

Query: 6   SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSME 65
            ++  G + +AWISY+SSTHNLSVAFTG+RNN+V MQ L   V LR +LPE V+FGFS  
Sbjct: 120 CNISGGIKTDAWISYSSSTHNLSVAFTGYRNNTVEMQFLSQIVSLRDYLPERVSFGFSAS 179

Query: 66  TGVDFTIFSIYLWEFNSSLEMDDETTNPV 94
           TG    + ++Y W+F+SSLE+DD  TNP+
Sbjct: 180 TGSASALHTLYSWDFSSSLEIDDNVTNPI 208

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449479047|ref|XP_004155490.1| PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Cucumis sativus]

 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 94/185 (50%), Gaps = 49/185 (26%)

Query: 3   LLRSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
           + + D+KSGRR + WI+Y+S+T NLS+ FTG+ NN  ++Q L++ VD R  LPE+VTFGF
Sbjct: 188 IWKCDIKSGRRTDVWINYDSATLNLSITFTGYENNKTILQRLNHDVDFRLTLPEWVTFGF 247

Query: 63  SMETGVDFTIFSIYLWEFNSSLEMDDETTNPVSNP------------------------K 98
           S  TG  +   +IY W+F S+L ++ + +N   +P                        K
Sbjct: 248 SAATGTLYATHNIYSWDFKSTLNLNSD-SNLAPSPGQGSKVGLVVGVGVGVGVVFLKRKK 306

Query: 99  RRRKNITALVV----RLSLGGG--------------------KLGQGGFGGVDKGFLRET 134
           R + N    VV        G G                    KLG+GGFGGV KGFLR+ 
Sbjct: 307 RMKMNWEEDVVLDDSEFEKGKGPRKFSYSELARATNNFWEDEKLGEGGFGGVYKGFLRDL 366

Query: 135 NSFFS 139
           NS+ +
Sbjct: 367 NSYVA 371

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088135|emb|CBI35556.3| unnamed protein product [Vitis vinifera]

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/109 (53%), Positives = 76/109 (69%), Gaps = 9/109 (8%)

Query: 8   VKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQ-GLDYQVDLRQHLPEFVTFGFSMET 66
           + +GRRN+AWISYNSS+ NLSV FTGFRN+S ++Q  L Y+VDLR +LPE+V+FGFS  T
Sbjct: 203 IINGRRNDAWISYNSSSKNLSVVFTGFRNDSTILQDNLYYEVDLRLYLPEWVSFGFSGAT 262

Query: 67  GVDFTIFSIYLWEFNSSLEMDDETTNPVSNPKRRRKNITALVVRLSLGG 115
           G    I +IY W      + +  T+NP SNP R+ K    LVV L++GG
Sbjct: 263 GNASAIHAIYSW------KAETPTSNPNSNPSRKIK--VKLVVGLTVGG 303

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449479044|ref|XP_004155489.1| PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Cucumis sativus]

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 48/94 (51%), Positives = 68/94 (72%), Gaps = 3/94 (3%)

Query: 5   RSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSM 64
           + D+  G+RN+ WI+Y+S THNLSV F+GF NN+ ++Q L + VDLR +LPE+VTFGFS 
Sbjct: 174 KCDIMGGKRNDVWINYDSDTHNLSVVFSGFENNNTLLQHLHHVVDLRLNLPEWVTFGFSA 233

Query: 65  ETGVDFTIFSIYLWEFNSSLEMDDE---TTNPVS 95
            TG ++   S+Y W F+S+LE+  E   TT+P S
Sbjct: 234 STGYEYATHSVYSWSFHSTLELTLEPTFTTDPNS 267

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438590|ref|XP_004137071.1| PREDICTED: LOW QUALITY PROTEIN: L-type lectin-domain containing receptor kinase IX.1-like [Cucumis sativus]

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 48/94 (51%), Positives = 68/94 (72%), Gaps = 3/94 (3%)

Query: 5   RSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSM 64
           + D+  G+RN+ WI+Y+S THNLSV F+GF NN+ ++Q L + VDLR +LPE+VTFGFS 
Sbjct: 174 KCDIMGGKRNDVWINYDSDTHNLSVVFSGFENNNTLLQHLHHVVDLRLNLPEWVTFGFSA 233

Query: 65  ETGVDFTIFSIYLWEFNSSLEMDDE---TTNPVS 95
            TG ++   S+Y W F+S+LE+  E   TT+P S
Sbjct: 234 STGYEYATHSVYSWSFHSTLELTLEPTFTTDPNS 267

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	187
UNIPROTKB|P02870	275	P02870 "Lectin" [Lens culinari	0.417	0.283	0.308	1.7e-05
UNIPROTKB|P58907	237	P58907 "Lectin alpha chain" [D	0.406	0.320	0.373	6.8e-05
UNIPROTKB|P81637	237	P81637 "Lectin alpha chain" [D	0.406	0.320	0.373	6.8e-05
TAIR|locus:2143528	711	AT5G03140 [Arabidopsis thalian	0.475	0.125	0.311	0.00023
TAIR|locus:2095390	174	AT3G28230 "AT3G28230" [Arabido	0.224	0.241	0.523	0.00024
UNIPROTKB|P83721	234	P83721 "Mannose/glucose-specif	0.401	0.320	0.384	0.00026
UNIPROTKB|P81517	236	P81517 "Lectin alpha chain" [C	0.417	0.330	0.370	0.00026
UNIPROTKB|P58908	237	P58908 "Lectin alpha chain" [D	0.406	0.320	0.361	0.00026
TAIR|locus:2142499	651	AT5G10530 [Arabidopsis thalian	0.379	0.109	0.388	0.00056
UNIPROTKB|B3EWJ2	237	B3EWJ2 "Lectin alpha chain" [D	0.406	0.320	0.349	0.00091

UNIPROTKB|P02870 P02870 "Lectin" [Lens culinaris (taxid:3864)]

 Score = 115 (45.5 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 25/81 (30%), Positives = 44/81 (54%)

Query:     7 DVKSGRRNEAWISYNSSTHNLSVAFT---GFRNNSVVMQGLDYQVDLRQHLPEFVTFGFS 63
             ++++G R    I++N++T+ L+V  T        +V    L+  V L+  +PE+V  GFS
Sbjct:   183 NLQNGERANVVIAFNAATNVLTVTLTYPNSLEEENVTSYTLNEVVPLKDVVPEWVRIGFS 242

Query:    64 METGVDFTIFSIYLWEFNSSL 84
               TG +F    ++ W F+S L
Sbjct:   243 ATTGAEFAAHEVHSWSFHSEL 263

GO:0005509 "calcium ion binding" evidence=IDA

GO:0009756 "carbohydrate mediated signaling" evidence=TAS

GO:0030145 "manganese ion binding" evidence=IDA

GO:0030246 "carbohydrate binding" evidence=IDA

UNIPROTKB|P58907 P58907 "Lectin alpha chain" [Dioclea virgata (taxid:167618)]

 Score = 110 (43.8 bits), Expect = 6.8e-05, P = 6.8e-05
 Identities = 31/83 (37%), Positives = 44/83 (53%)

Query:     5 RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
             R ++++G+   A ISYNS    LS  V++TG  + +V      Y VDL   LPE+V  G 
Sbjct:    39 RWNMQTGKVGTAHISYNSVAKRLSAVVSYTGSSSTTV-----SYDVDLNNVLPEWVRVGL 93

Query:    63 SMETGVDFTIFSIYLWEFNSSLE 85
             S  TG+     +I  W F S L+
Sbjct:    94 SATTGLYKETNTILSWSFTSKLK 116

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0030246 "carbohydrate binding" evidence=IDA

UNIPROTKB|P81637 P81637 "Lectin alpha chain" [Dioclea guianensis (taxid:99571)]

 Score = 110 (43.8 bits), Expect = 6.8e-05, P = 6.8e-05
 Identities = 31/83 (37%), Positives = 44/83 (53%)

Query:     5 RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
             R ++++G+   A ISYNS    LS  V++TG  + +V      Y VDL   LPE+V  G 
Sbjct:    39 RWNMQTGKVGTAHISYNSVAKRLSAVVSYTGSSSTTV-----SYDVDLNNVLPEWVRVGL 93

Query:    63 SMETGVDFTIFSIYLWEFNSSLE 85
             S  TG+     +I  W F S L+
Sbjct:    94 SATTGLYKETNTILSWSFTSKLK 116

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0030246 "carbohydrate binding" evidence=IDA

TAIR|locus:2143528 AT5G03140 [Arabidopsis thaliana (taxid:3702)]

 Score = 112 (44.5 bits), Expect = 0.00023, P = 0.00023
 Identities = 28/90 (31%), Positives = 45/90 (50%)

Query:     7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
             D+KSG    +WI+Y+ S   L+V +  + N       L   +DL +++ + +  GFS  T
Sbjct:   187 DLKSGNAVNSWITYDGSGRVLTV-YVSYSNLKPKSPILSVPLDLDRYVSDSMFVGFSGST 245

Query:    67 GVDFTIFSIYLWEFNSSLEMDDETTNPVSN 96
                  I S+  W F+SS E   E+  P+ N
Sbjct:   246 QGSTEIHSVDWWSFSSSFEESSESPPPMPN 275

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=ISS

TAIR|locus:2095390 AT3G28230 "AT3G28230" [Arabidopsis thaliana (taxid:3702)]

 Score = 103 (41.3 bits), Expect = 0.00024, P = 0.00024
 Identities = 22/42 (52%), Positives = 24/42 (57%)

Query:   146 KHGKAVALCKGLFRDIRNPTGPYGGEATGSNPGISKSTRFKN 187
             +H K V   KG  RDIR   GPY GE  G NP  S+S R KN
Sbjct:   133 QHKKIVINRKGQVRDIRTQVGPYAGETRGINPYTSRSIRIKN 174

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0016458 "gene silencing" evidence=IEA

UNIPROTKB|P83721 P83721 "Mannose/glucose-specific lectin Cramoll" [Cratylia mollis (taxid:252530)]

 Score = 106 (42.4 bits), Expect = 0.00026, P = 0.00026
 Identities = 30/78 (38%), Positives = 38/78 (48%)

Query:     5 RSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSM 64
             R DV++G+   A ISYNS    LS A   +   S     + Y VDL   LPE+V  G S 
Sbjct:    39 RWDVQNGKVGTAHISYNSVAKRLS-AVVSYPGGSSAT--VSYDVDLNNILPEWVRVGLSA 95

Query:    65 ETGVDFTIFSIYLWEFNS 82
              TG+     +I  W F S
Sbjct:    96 STGLYKETNTILSWSFTS 113

GO:0005536 "glucose binding" evidence=IDA

GO:0005537 "mannose binding" evidence=IDA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|P81517 P81517 "Lectin alpha chain" [Cratylia argentea (taxid:83131)]

 Score = 106 (42.4 bits), Expect = 0.00026, P = 0.00026
 Identities = 30/81 (37%), Positives = 39/81 (48%)

Query:     5 RSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSM 64
             R +V+ G+   A ISYNS    LS A   +   S     + Y VDL   LPE+V  G S 
Sbjct:    39 RWNVQDGKVGTAHISYNSVAKRLS-AIVSYPGGSSAT--VSYDVDLNNILPEWVRVGLSA 95

Query:    65 ETGVDFTIFSIYLWEFNSSLE 85
              TG+     +I  W F S L+
Sbjct:    96 STGLYKETNTILSWSFTSKLK 116

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0030246 "carbohydrate binding" evidence=IDA

UNIPROTKB|P58908 P58908 "Lectin alpha chain" [Dioclea rostrata (taxid:192416)]

 Score = 106 (42.4 bits), Expect = 0.00026, P = 0.00026
 Identities = 30/83 (36%), Positives = 43/83 (51%)

Query:     5 RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
             R ++++G+     ISYNS    LS  V++TG  + +V      Y VDL   LPE+V  G 
Sbjct:    39 RWNMQTGKVGTVHISYNSVAKRLSAVVSYTGSSSTTV-----SYDVDLNNVLPEWVRVGL 93

Query:    63 SMETGVDFTIFSIYLWEFNSSLE 85
             S  TG+     +I  W F S L+
Sbjct:    94 SATTGLYKETNTILSWSFTSKLK 116

GO:0000325 "plant-type vacuole" evidence=IDA

GO:0002553 "histamine secretion by mast cell" evidence=IDA

GO:0030246 "carbohydrate binding" evidence=IDA

GO:0033095 "aleurone grain" evidence=IDA

TAIR|locus:2142499 AT5G10530 [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 0.00056, P = 0.00056
 Identities = 28/72 (38%), Positives = 41/72 (56%)

Query:    18 ISYNSSTHNLSVAFT-GFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIY 76
             I Y+S+  NLSV++T    ++ +    L Y +DL + LP  VT GFS  +G       + 
Sbjct:   187 IFYDSARRNLSVSWTYDLTSDPLENSSLSYIIDLSKVLPSEVTIGFSATSGGVTEGNRLL 246

Query:    77 LWEFNSSLEMDD 88
              WEF+SSLE+ D
Sbjct:   247 SWEFSSSLELID 258

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|B3EWJ2 B3EWJ2 "Lectin alpha chain" [Dioclea sclerocarpa (taxid:1176036)]

 Score = 102 (41.0 bits), Expect = 0.00091, P = 0.00091
 Identities = 29/83 (34%), Positives = 43/83 (51%)

Query:     5 RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
             R ++++G+     ISYNS    LS  V+++G  + +V      Y VDL   LPE+V  G 
Sbjct:    39 RWNMQTGKVGTVHISYNSVAKRLSAVVSYSGSSSTTV-----SYDVDLNNVLPEWVRVGL 93

Query:    63 SMETGVDFTIFSIYLWEFNSSLE 85
             S  TG+     +I  W F S L+
Sbjct:    94 SATTGLYKETNTILSWSFTSKLK 116

GO:0005509 "calcium ion binding" evidence=IDA

GO:0005536 "glucose binding" evidence=IDA

GO:0005537 "mannose binding" evidence=IDA

GO:0030145 "manganese ion binding" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.17120001 hypothetical protein (713 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	187
cd06899	236	cd06899, lectin_legume_LecRK_Arcelin_ConA, legume	9e-16
pfam00139	231	pfam00139, Lectin_legB, Legume lectin domain	9e-08
pfam09368	76	pfam09368, Sas10_Utp3_C, Sas10 C-terminal domain	6e-05
cd01951	223	cd01951, lectin_L-type, legume lectins	3e-04

>gnl|CDD|173887 cd06899, lectin_legume_LecRK_Arcelin_ConA, legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor

 Score = 71.9 bits (177), Expect = 9e-16
 Identities = 30/76 (39%), Positives = 39/76 (51%)

Query: 9   KSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGV 68
           KSG+  +AWI Y+SS+  LSV              L Y VDL + LPE V  GFS  TG+
Sbjct: 161 KSGKPMQAWIDYDSSSKRLSVTLAYSGVAKPKKPLLSYPVDLSKVLPEEVYVGFSASTGL 220

Query: 69  DFTIFSIYLWEFNSSL 84
              +  I  W F+S+ 
Sbjct: 221 LTELHYILSWSFSSNG 236

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by binding glycans on the cell surface. Medically, PHA is used as a mitogen to trigger cell division in T-lymphocytes and to activate latent HIV-1 from human peripheral lymphocytes. Plant L-type lectins are primarily found in the seeds of leguminous plants where they constitute about 10% of the total soluble protein of the seed extracts. They are synthesized during seed development several weeks after flowering and transported to the vacuole where they become condensed into specialized vesicles called protein bodies. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 236

>gnl|CDD|215744 pfam00139, Lectin_legB, Legume lectin domain

 Score = 50.0 bits (120), Expect = 9e-08
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           D+ SG+  + WI Y+ S+  LSV           +  L   VDL   LPE+V  GFS  T
Sbjct: 159 DLNSGKPIQVWIDYDGSSKRLSVTLAYPNKPKRPL--LSASVDLSTVLPEWVYVGFSAST 216

Query: 67  GVDFTIFSIYLWEFN 81
           G       +  W F+
Sbjct: 217 GGATESHYVLSWSFS 231

Length = 231

>gnl|CDD|220207 pfam09368, Sas10_Utp3_C, Sas10 C-terminal domain

 Score = 39.5 bits (93), Expect = 6e-05
 Identities = 15/40 (37%), Positives = 20/40 (50%)

Query: 146 KHGKAVALCKGLFRDIRNPTGPYGGEATGSNPGISKSTRF 185
           K+ KAV   K   R +R   G YGGE TG    + +S + 
Sbjct: 37  KYEKAVKRLKSQRRVVREEDGGYGGETTGIKTNVVRSVKL 76

This family contains a C-terminal presumed domain in Sas10 which hash been identified as a regulator of chromatin silencing. Length = 76

>gnl|CDD|173886 cd01951, lectin_L-type, legume lectins

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 11  GRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDF 70
           G  +   I+Y+ +T+ L+V       +++    +   VDL Q  P    FGF+  TG   
Sbjct: 154 GNEHTVRITYDPTTNTLTVYLDN--GSTLTSLDITIPVDLIQLGPTKAYFGFTASTGGLT 211

Query: 71  TIFSIYLWEFNS 82
            +  I  W F S
Sbjct: 212 NLHDILNWSFTS 223

The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely. Length = 223

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	187
cd06899	236	lectin_legume_LecRK_Arcelin_ConA legume lectins, l	99.8
PF00139	236	Lectin_legB: Legume lectin domain; InterPro: IPR00	99.77
cd01951	223	lectin_L-type legume lectins. The L-type (legume-t	99.56
cd07308	218	lectin_leg-like legume-like lectins: ERGIC-53, ERG	98.17
KOG1187	361	consensus Serine/threonine protein kinase [Signal	97.9
KOG0595	429	consensus Serine/threonine-protein kinase involved	97.77
cd06902	225	lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 tran	97.68
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	97.67
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	97.56
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	97.53
PF09368	76	Sas10: Sas10 C-terminal domain; InterPro: IPR01897	97.46
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	97.43
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	97.38
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	97.22
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	97.12
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.05
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	96.9
PTZ00036	440	glycogen synthase kinase; Provisional	96.89
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	96.78
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	96.75
KOG0575	592	consensus Polo-like serine/threonine protein kinas	96.72
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	96.71
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	96.7
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	96.69
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	96.68
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	96.67
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	96.67
PTZ00284	467	protein kinase; Provisional	96.67
KOG0192	362	consensus Tyrosine kinase specific for activated (	96.65
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	96.65
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	96.61
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	96.59
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	96.59
PTZ00263	329	protein kinase A catalytic subunit; Provisional	96.57
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	96.55
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	96.54
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	96.54
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	96.52
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	96.51
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	96.51
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	96.5
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	96.5
PF03388	229	Lectin_leg-like: Legume-like lectin family; InterP	96.49
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	96.48
PRK09188	365	serine/threonine protein kinase; Provisional	96.48
KOG2052	513	consensus Activin A type IB receptor, serine/threo	96.47
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	96.47
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	96.46
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	96.44
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	96.44
KOG0661	538	consensus MAPK related serine/threonine protein ki	96.44
KOG0598	357	consensus Ribosomal protein S6 kinase and related	96.42
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	96.39
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	96.38
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	96.38
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	96.38
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	96.35
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	96.35
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	96.33
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	96.32
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	96.32
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	96.31
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	96.31
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	96.31
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	96.31
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	96.3
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	96.29
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	96.28
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	96.28
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	96.27
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	96.27
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	96.27
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	96.25
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	96.25
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	96.25
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	96.23
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	96.22
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	96.22
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	96.21
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	96.2
PLN00034	353	mitogen-activated protein kinase kinase; Provision	96.19
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	96.19
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	96.18
PHA03212	391	serine/threonine kinase US3; Provisional	96.18
PTZ00283	496	serine/threonine protein kinase; Provisional	96.18
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	96.17
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	96.16
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	96.16
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	96.16
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	96.15
cd06903	215	lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmem	96.14
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	96.14
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	96.12
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	96.11
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	96.11
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	96.11
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	96.1
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	96.1
KOG3653	534	consensus Transforming growth factor beta/activin	96.09
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	96.09
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	96.09
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	96.09
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	96.09
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	96.07
PLN03224	507	probable serine/threonine protein kinase; Provisio	96.05
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	96.05
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	96.04
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	96.04
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	96.03
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	96.03
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	96.03
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	96.02
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	96.02
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	96.02
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	96.02
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	96.01
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	96.01
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	96.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	96.0
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	96.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	95.99
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	95.99
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	95.98
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	95.98
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	95.97
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	95.97
PTZ00024	335	cyclin-dependent protein kinase; Provisional	95.96
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	95.96
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	95.96
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	95.96
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	95.96
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	95.93
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	95.93
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	95.93
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	95.92
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	95.91
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	95.9
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	95.89
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	95.89
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	95.89
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	95.88
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	95.88
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	95.87
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	95.87
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	95.85
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	95.85
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	95.85
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	95.85
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	95.84
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	95.83
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	95.82
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	95.82
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	95.82
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	95.82
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	95.82
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	95.82
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	95.81
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	95.8
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	95.79
cd06901	248	lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembr	95.78
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	95.78
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	95.78
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	95.78
KOG0605	550	consensus NDR and related serine/threonine kinases	95.76
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	95.76
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	95.76
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	95.75
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	95.75
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	95.75
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	95.74
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	95.74
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	95.74
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	95.73
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	95.73
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	95.73
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	95.73
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	95.73
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	95.71
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	95.69
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	95.69
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	95.68
KOG0198	313	consensus MEKK and related serine/threonine protei	95.68
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	95.67
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	95.67
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	95.67
KOG3838	497	consensus Mannose lectin ERGIC-53, involved in gly	95.66
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	95.66
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	95.66
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	95.65
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	95.65
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	95.65
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	95.64
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	95.63
KOG0201	467	consensus Serine/threonine protein kinase [Signal	95.63
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	95.62
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	95.62
PHA03209	357	serine/threonine kinase US3; Provisional	95.62
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	95.61
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	95.59
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	95.58
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	95.58
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	95.57
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	95.57
PLN00009	294	cyclin-dependent kinase A; Provisional	95.56
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	95.56
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	95.56
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	95.54
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	95.54
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	95.54
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	95.53
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	95.53
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	95.52
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	95.51
KOG0577	948	consensus Serine/threonine protein kinase [Signal	95.51
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	95.49
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	95.49
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	95.48
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	95.47
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	95.46
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	95.46
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	95.46
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	95.45
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	95.45
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	95.44
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	95.43
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	95.41
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	95.41
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	95.4
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	95.4
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	95.4
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	95.4
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	95.39
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	95.38
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	95.38
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	95.37
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	95.36
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	95.36
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	95.36
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	95.36
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	95.33
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	95.33
PHA03211	461	serine/threonine kinase US3; Provisional	95.33
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	95.32
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	95.31
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	95.28
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	95.28
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	95.28
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	95.27
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	95.26
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	95.26
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	95.26
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	95.25
KOG0581	364	consensus Mitogen-activated protein kinase kinase	95.24
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	95.23
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	95.22
PHA02988	283	hypothetical protein; Provisional	95.22
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	95.21
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	95.21
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	95.19
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	95.19
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	95.19
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	95.18
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	95.17
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	95.17
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	95.15
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	95.14
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	95.13
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	95.13
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	95.12
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	95.12
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	95.12
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	95.11
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	95.1
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	95.1
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	95.09
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	95.08
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	95.06
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	95.05
KOG0583	370	consensus Serine/threonine protein kinase [Signal	95.02
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	95.02
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	95.02
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	94.99
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	94.99
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	94.99
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	94.98
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	94.97
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	94.96
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	94.96
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	94.94
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	94.94
KOG0694	694	consensus Serine/threonine protein kinase [Signal	94.94
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	94.92
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	94.9
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	94.9
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	94.88
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	94.87
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	94.87
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	94.86
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	94.82
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	94.78
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	94.77
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	94.75
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	94.75
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	94.75
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	94.73
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	94.73
PTZ00267	478	NIMA-related protein kinase; Provisional	94.73
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	94.73
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	94.72
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	94.69
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	94.69
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	94.66
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	94.63
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	94.63
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	94.62
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	94.55
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	94.52
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	94.5
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	94.45
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	94.44
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	94.43
PHA02882	294	putative serine/threonine kinase; Provisional	94.42
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	94.35
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	94.31
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	94.3
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	94.28
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	94.28
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	94.22
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	94.16
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	94.15
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	94.14
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	94.13
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	94.11
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	94.06
KOG1989	738	consensus ARK protein kinase family [Signal transd	93.99
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	93.96
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	93.95
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	93.91
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	93.83
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	93.81
PHA03207	392	serine/threonine kinase US3; Provisional	93.75
PTZ00266	1021	NIMA-related protein kinase; Provisional	93.75
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	93.72
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	93.57
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	93.45
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	93.45
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	93.44
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	93.42
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	93.41
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	93.28
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	93.24
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	93.23
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	93.05
KOG0578	550	consensus p21-activated serine/threonine protein k	93.03
KOG0582	516	consensus Ste20-like serine/threonine protein kina	92.97
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	92.95
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	92.9
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	92.88
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	92.8
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	92.75
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	92.72
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	92.59
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	92.57
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	92.44
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	92.22
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	92.15
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	92.09
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	91.91
KOG3118	517	consensus Disrupter of silencing SAS10 [Chromatin	91.73
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	91.69
smart00090	237	RIO RIO-like kinase.	91.66
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	91.6
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	91.52
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	91.47
KOG0610	459	consensus Putative serine/threonine protein kinase	91.46
KOG0586	596	consensus Serine/threonine protein kinase [General	91.46
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	91.41
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	91.31
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	91.3
PRK10345	210	hypothetical protein; Provisional	91.3
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	91.24
PRK14879	211	serine/threonine protein kinase; Provisional	90.72
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	90.64
cd06900	255	lectin_VcfQ VcfQ bacterial pilus biogenesis protei	90.58
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	90.46
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	90.18
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	89.78
PHA03210	501	serine/threonine kinase US3; Provisional	89.73
KOG4721	904	consensus Serine/threonine protein kinase, contain	89.12
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	89.04
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	88.85
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	88.82
KOG0589	426	consensus Serine/threonine protein kinase [General	88.45
KOG0611	668	consensus Predicted serine/threonine protein kinas	87.68
KOG3839	351	consensus Lectin VIP36, involved in the transport	87.48
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	87.36
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	86.83
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	85.56
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	85.12
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	83.66
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	83.61
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	82.45
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	82.28
PRK09605	535	bifunctional UGMP family protein/serine/threonine	80.87
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	80.35

>cd06899 lectin_legume_LecRK_Arcelin_ConA legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor

Probab=99.80  E-value=1.6e-19  Score=150.39  Aligned_cols=77  Identities=39%  Similarity=0.568  Sum_probs=72.7

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeeeeeccC
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSS   83 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~F~~~   83 (187)
                      +|.+|+.++|||+||+.+++|+|+|.+.+..+|..|+|+..+||+++|+++|||||||+||...+.|+|++|+|++.
T Consensus       159 ~l~~g~~~~v~I~Y~~~~~~L~V~l~~~~~~~~~~~~ls~~vdL~~~l~~~~~vGFSasTG~~~~~h~i~sWsF~s~  235 (236)
T cd06899         159 KLKSGKPMQAWIDYDSSSKRLSVTLAYSGVAKPKKPLLSYPVDLSKVLPEEVYVGFSASTGLLTELHYILSWSFSSN  235 (236)
T ss_pred             cccCCCeEEEEEEEcCCCCEEEEEEEeCCCCCCcCCEEEEeccHHHhCCCceEEEEEeEcCCCcceEEEEEEEEEcC
Confidence            36799999999999999999999999887668999999999999999999999999999999999999999999875

This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by bindin

>PF00139 Lectin_legB: Legume lectin domain; InterPro: IPR001220 Legume lectins are one of the largest lectin families with more than 70 lectins reported

Probab=99.77  E-value=1.1e-18  Score=145.06  Aligned_cols=77  Identities=32%  Similarity=0.521  Sum_probs=70.4

Q ss_pred             eccccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeeeeec
Q 047282            4 LRSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFN   81 (187)
Q Consensus         4 ~~~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~F~   81 (187)
                      .+.+|.+|+.+.|||+||+.+++|+|+|.... .+|..|+|+..+||+.+|+++||||||||||...+.|.|++|+|+
T Consensus       160 ~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~-~~~~~~~l~~~vdL~~~l~~~v~vGFsasTG~~~~~h~I~sW~F~  236 (236)
T PF00139_consen  160 PSFSLSDGKWHTVWIDYDASTKRLSVYLDDNS-SKPSSPVLSVNVDLSAVLPEQVYVGFSASTGGSYQTHDILSWSFS  236 (236)
T ss_dssp             EEHHHGTTSEEEEEEEEETTTTEEEEEEEETT-TTSEEEEEEEE--HHHHSCSEEEEEEEEEESSSSEEEEEEEEEEE
T ss_pred             ccccccCCcEEEEEEEEcCCccEEEEEEeccc-CCCcceeEEEEEchHHhcCCCcEEEEEeecCCCcceEEEEEEEeC
Confidence            35678899999999999999999999999885 589999999999999999999999999999999999999999995

Leguminous plant lectins resemble each other in their physicochemical properties although they differ in their carbohydrate specificities. They consist of two or four subunits with relative molecular mass of 30 kDa and each subunit has one carbohydrate-binding site. The interaction with sugars requires tightly bound calcium and manganese ions. The structural similarities of these lectins are reported by the primary structural analyses and X-ray crystallographic studies. X-ray studies have shown that the folding of the polypeptide chains in the region of the carbohydrate-binding sites is also similar, despite differences in the primary sequences. The carbohydrate-binding sites of these lectins consist of two conserved amino acids on beta pleated sheets. One of these loops contains transition metals, calcium and manganese, which keep the amino acid residues of the sugar-binding site at the required positions. Amino acid sequences of this loop play an important role in the carbohydrate-binding specificities of these lectins. These lectins bind either glucose/mannose or galactose. The exact function of legume lectins is not known but they may be involved in the attachment of nitrogen-fixing bacteria to legumes and in the protection against pathogens. Some legume lectins are proteolytically processed to produce two chains, beta (which corresponds to the N-terminal) and alpha (C-terminal) (IPR000985 from INTERPRO). The lectin concanavalin A (conA) from jack bean is exceptional in that the two chains are transposed and ligated (by formation of a new peptide bond). The N terminus of mature conA thus corresponds to that of the alpha chain and the C terminus to the beta chain.; GO: 0005488 binding; PDB: 1VLN_B 2GDF_C 2JE9_C 2JEC_C 1DGL_B 2P37_B 2CWM_A 2P34_D 2OW4_A 3IPV_B ....

>cd01951 lectin_L-type legume lectins

Probab=99.56  E-value=1.2e-14  Score=119.57  Aligned_cols=71  Identities=28%  Similarity=0.423  Sum_probs=65.5

Q ss_pred             CCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeeeeecc
Q 047282           10 SGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNS   82 (187)
Q Consensus        10 ~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~F~~   82 (187)
                      +|+.++|||+||+.++.|+|+|.....  |..|.++..+||+.+++++|||||+||||...+.|+|++|+|..
T Consensus       153 ~g~~~~v~I~Y~~~~~~L~v~l~~~~~--~~~~~l~~~~~l~~~~~~~~yvGFTAsTG~~~~~h~V~~wsf~~  223 (223)
T cd01951         153 LGNEHTVRITYDPTTNTLTVYLDNGST--LTSLDITIPVDLIQLGPTKAYFGFTASTGGLTNLHDILNWSFTS  223 (223)
T ss_pred             CCCEEEEEEEEeCCCCEEEEEECCCCc--cccccEEEeeeecccCCCcEEEEEEcccCCCcceeEEEEEEecC
Confidence            388999999999999999999987654  67799999999999999999999999999999999999999963

The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely.

>cd07308 lectin_leg-like legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47

Probab=98.17  E-value=1e-05  Score=66.32  Aligned_cols=72  Identities=22%  Similarity=0.099  Sum_probs=52.6

Q ss_pred             eccccCC-CceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeeeeec
Q 047282            4 LRSDVKS-GRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFN   81 (187)
Q Consensus         4 ~~~~l~~-G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~F~   81 (187)
                      |.+..++ +..++++|.|+  .+.|.|.+....   +....+...++.- .+++..|+||||+||...+.|+|++|.+.
T Consensus       144 c~~~~~~~~~~~~~~I~y~--~~~l~v~i~~~~---~~~~~~c~~~~~~-~l~~~~y~G~sA~tg~~~d~~dIls~~~~  216 (218)
T cd07308         144 CSLKFRNSNAPTTLRISYL--NNTLKVDITYSE---GNNWKECFTVEDV-ILPSQGYFGFSAQTGDLSDNHDILSVHTY  216 (218)
T ss_pred             eeEecccCCCCeEEEEEEE--CCEEEEEEeCCC---CCCccEEEEcCCc-ccCCCCEEEEEeccCCCcCcEEEEEEEee
Confidence            3333433 67899999999  688999997542   2223334433322 56788999999999999999999999875

The legume-like (leg-like) lectins are eukaryotic intracellular sugar transport proteins with a carbohydrate recognition domain similar to that of the legume lectins. This domain binds high-mannose-type oligosaccharides for transport from the endoplasmic reticulum to the Golgi complex. These leg-like lectins include ERGIC-53, ERGL, VIP36, VIPL, EMP46, EMP47, and the UIP5 (ULP1-interacting protein 5) precursor protein. Leg-like lectins have different intracellular distributions and dynamics in the endoplasmic reticulum-Golgi system of the secretory pathway and interact with N-glycans of glycoproteins in a calcium-dependent manner, suggesting a role in glycoprotein sorting and trafficking. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "ba

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.90  E-value=1.6e-05  Score=70.23  Aligned_cols=52  Identities=21%  Similarity=0.324  Sum_probs=36.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ++||+|+||.||||.+.+ +..||||++.....+...++..++.-+.+-+|++
T Consensus        81 ~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~N  132 (361)
T KOG1187|consen   81 NLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPN  132 (361)
T ss_pred             cceecCCCeEEEEEEECC-CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcC
Confidence            899999999999999987 5889999987644321233555555444433443

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=97.77  E-value=2.9e-05  Score=69.14  Aligned_cols=51  Identities=18%  Similarity=0.270  Sum_probs=39.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hh---hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GK---AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~---~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||.|.|+.||+|+++.++.+||||.+.++.  .+   ....+...+++|+|+|-
T Consensus        16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nI   71 (429)
T KOG0595|consen   16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNI   71 (429)
T ss_pred             hhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcce
Confidence            56999999999999999989999999997753  22   22445566677777763

>cd06902 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain

Probab=97.68  E-value=0.00023  Score=59.14  Aligned_cols=67  Identities=18%  Similarity=0.068  Sum_probs=47.0

Q ss_pred             CceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecC-CccCCceeEEEEEeecCCCccccceeeeeec
Q 047282           11 GRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDL-RQHLPEFVTFGFSMETGVDFTIFSIYLWEFN   81 (187)
Q Consensus        11 G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdL-s~~L~~~v~VGFSasTG~~~~~h~i~sW~F~   81 (187)
                      ..+.++.|.|+.  +.|+|.+.....  +.......-+++ .-.||+..|+||||+||...+.|+|++|.|.
T Consensus       155 ~~p~~~rI~Y~~--~~l~V~~d~~~~--~~~~~~~~Cf~~~~v~LP~~~yfGiSA~Tg~l~d~hDIls~~~~  222 (225)
T cd06902         155 PYPVRAKITYYQ--NVLTVSINNGFT--PNKDDYELCTRVENMVLPPNGYFGVSAATGGLADDHDVLSFLTF  222 (225)
T ss_pred             CCCeEEEEEEEC--CeEEEEEeCCcC--CCCCcccEEEecCCeeCCCCCEEEEEecCCCCCCcEeEEEEEEe
Confidence            467889999998  568888864221  121111111222 2357788999999999999999999999886

ERGIC-53 and ERGL, N-terminal carbohydrate recognition domain. ERGIC-53 and ERGL are eukaryotic mannose-binding type 1 transmembrane proteins of the early secretory pathway that transport newly synthesized glycoproteins from the endoplasmic reticulum (ER) to the ER-Golgi intermediate compartment (ERGIC). ERGIC-53 and ERGL have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. ERGIC-53 functions as a 'cargo receptor' to facilitate the export of glycoproteins with different characteristics from the ER, while the ERGIC-53-like protein (ERGL) which may act as a regulator of ERGIC-53. In mammals, ERGIC-53 forms a complex with MCFD2 (multi-coagulation factor deficiency 2) which then recruits blood coagulation factors V and VIII. Mutations in either MCFD2 or ERGIC-53 cause a mild form of inherite

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=97.67  E-value=5.1e-05  Score=66.64  Aligned_cols=50  Identities=24%  Similarity=0.235  Sum_probs=41.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~  166 (187)
                      +++|.|.||.||+|.+.+++.++|||+...+.+... .+...++.+.|||-
T Consensus        30 ~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~kn-rEl~im~~l~HpNI   79 (364)
T KOG0658|consen   30 RLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKN-RELQIMRKLDHPNI   79 (364)
T ss_pred             EEEeecccceEEEEEEcCCCceeEEEEecCCCCcCc-HHHHHHHhcCCcCe
Confidence            899999999999999998889999999988666443 34556678888873

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=97.56  E-value=7e-05  Score=69.59  Aligned_cols=51  Identities=20%  Similarity=0.262  Sum_probs=38.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhh-----HHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKA-----VALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~-----~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|.||+||||+.+.+...||+|.+.+..+..     ...+....++|+|||.
T Consensus         8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpni   63 (808)
T KOG0597|consen    8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNI   63 (808)
T ss_pred             HHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcch
Confidence            56899999999999999989999999997744332     3344445556777663

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=97.53  E-value=0.00012  Score=62.55  Aligned_cols=51  Identities=24%  Similarity=0.316  Sum_probs=38.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-----hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-----KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-----~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|.||.||+|+...++..||||+|...+.     -...++.+..++++|+|.
T Consensus         8 ~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nI   63 (318)
T KOG0659|consen    8 EKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNI   63 (318)
T ss_pred             hhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcch
Confidence            578999999999999988899999999965322     133456666777776653

>PF09368 Sas10: Sas10 C-terminal domain; InterPro: IPR018972 This entry represents the C-terminal domain of the Something about silencing protein 10 (Sas10), which is essential for gene silencing and has a role in the structure of silenced chromatin [, ]

Probab=97.46  E-value=5.5e-05  Score=52.62  Aligned_cols=38  Identities=37%  Similarity=0.589  Sum_probs=32.2

Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCCCCCCCCceeeeeeee
Q 047282          148 GKAVALCKGLFRDIRNPTGPYGGEATGSNPGISKSTRF  185 (187)
Q Consensus       148 ~~~~~~~~~~~~~Ir~~n~~~~~~~~~~~~~~~~~~~~  185 (187)
                      +++......+++.++.+.+.|+||.+||++++.+|++|
T Consensus        39 ~ka~kk~k~q~~~~r~~~~~Y~GE~tGI~~~v~kS~kl   76 (76)
T PF09368_consen   39 EKAMKKRKSQVRVVRKESGNYGGETTGIKANVVKSVKL   76 (76)
T ss_pred             HHHHHHHcCcccccccCCCCCcceecccccCeeeeeeC
Confidence            44555666677788899999999999999999999986

Sas10 plays a role in the developing brain, and may bind RNA. SAS10 from Saccharomyces cerevisiae (Baker's yeast) is primarily required at the G2/M phase and is essential for viability, being involved in nucleolar processing of pre-18S ribosomal RNA as part of the ribosomal small subunit (SSU) processome [].; GO: 0016458 gene silencing, 0005634 nucleus

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=97.43  E-value=0.00017  Score=62.76  Aligned_cols=52  Identities=15%  Similarity=0.204  Sum_probs=38.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh-----hHHHHHHHHHHHhCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK-----AVALCKGLFRDIRNPTGP  167 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~-----~~~~~~~~~~~Ir~~n~~  167 (187)
                      .++|+|+||.|||++.+++|+.||||++-.+.+.     -..++....+.++|+|--
T Consensus         8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLV   64 (396)
T KOG0593|consen    8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLV   64 (396)
T ss_pred             hccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHH
Confidence            4689999999999999999999999999653331     123445556677777743

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=97.38  E-value=0.00019  Score=63.09  Aligned_cols=53  Identities=13%  Similarity=0.198  Sum_probs=43.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh-----hHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK-----AVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~-----~~~~~~~~~~~Ir~~n~~~  168 (187)
                      |.|++|.||.||+|+.+.++..||+|++..+.++     ...++.+.+.++||||--.
T Consensus        82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~  139 (419)
T KOG0663|consen   82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVE  139 (419)
T ss_pred             hhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeee
Confidence            9999999999999999988999999999775543     2356677778888888543

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.22  E-value=0.00029  Score=64.49  Aligned_cols=51  Identities=24%  Similarity=0.275  Sum_probs=37.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh--hH---HHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK--AV---ALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~--~~---~~~~~~~~~Ir~~n~  166 (187)
                      .+||+|.||.||||+...++..||+|++..+.+.  -.   .++...+++|.|||.
T Consensus       123 ~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNI  178 (560)
T KOG0600|consen  123 EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNI  178 (560)
T ss_pred             HHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcc
Confidence            8999999999999999888999999999765532  22   233444445555543

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=97.12  E-value=0.0011  Score=53.44  Aligned_cols=51  Identities=24%  Similarity=0.272  Sum_probs=37.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHH-----HHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVA-----LCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~-----~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++..+.++..+|+|.+.........     .+....+.++|+|-
T Consensus         5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i   60 (260)
T PF00069_consen    5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNI   60 (260)
T ss_dssp             EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTB
T ss_pred             EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccc
Confidence            6799999999999999988889999999765432222     23445566766653

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.05  E-value=0.00047  Score=68.56  Aligned_cols=53  Identities=23%  Similarity=0.216  Sum_probs=37.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc-hhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      .+||+||||.|||++-+-+|.++|||+|.... .+....-..+++.+.+-||+|
T Consensus       485 ~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpN  538 (1351)
T KOG1035|consen  485 ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPN  538 (1351)
T ss_pred             HHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcc
Confidence            88999999999999988889999999996542 222222333455455555544

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=96.90  E-value=0.001  Score=58.09  Aligned_cols=51  Identities=22%  Similarity=0.327  Sum_probs=41.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-----hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-----KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-----~~~~~~~~~~~~Ir~~n~  166 (187)
                      .+||+|.||.||+|+.+.+|..||+|++....+     .....+....++++|+|+
T Consensus        17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~   72 (323)
T KOG0594|consen   17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANH   72 (323)
T ss_pred             HHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcc
Confidence            569999999999999998899999999965433     123566778888999996

>PTZ00036 glycogen synthase kinase; Provisional

Probab=96.89  E-value=0.0017  Score=58.35  Aligned_cols=51  Identities=14%  Similarity=0.074  Sum_probs=39.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGP  167 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~  167 (187)
                      ..||+|+||.||+|....++..+|+|++..... ....+...++.++|+|.-
T Consensus        72 ~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~-~~~~Ei~il~~l~h~niv  122 (440)
T PTZ00036         72 NIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ-YKNRELLIMKNLNHINII  122 (440)
T ss_pred             EEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc-hHHHHHHHHHhcCCCCCc
Confidence            789999999999999987788999999865332 223455667778888753

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=96.78  E-value=0.0028  Score=52.76  Aligned_cols=53  Identities=25%  Similarity=0.329  Sum_probs=35.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch---hhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG---KAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~---~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||++....++..+|+|.+.....   ........+++-+++.++++
T Consensus         6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~   61 (285)
T cd05631           6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRF   61 (285)
T ss_pred             EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCc
Confidence            679999999999999887789999999865321   11122334444455445444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=96.75  E-value=0.003  Score=52.61  Aligned_cols=50  Identities=22%  Similarity=0.367  Sum_probs=35.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch----hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG----KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~----~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..+|+|.+.....    .....+....+.++|+|
T Consensus        11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~n   64 (288)
T cd07871          11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHAN   64 (288)
T ss_pred             eEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCC
Confidence            789999999999999987788999998854321    12223344455566655

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.72  E-value=0.0025  Score=59.27  Aligned_cols=50  Identities=22%  Similarity=0.231  Sum_probs=37.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc------hhhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH------GKAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~------~~~~~~~~~~~~~Ir~~n  165 (187)
                      ++||+|||..||+++..++|..+|+|.+.++.      +.....+.+.-+.|.|||
T Consensus        24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~Hpn   79 (592)
T KOG0575|consen   24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPN   79 (592)
T ss_pred             eeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCc
Confidence            88999999999999997789999999996632      222333444445677776

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=96.71  E-value=0.003  Score=52.84  Aligned_cols=30  Identities=20%  Similarity=0.309  Sum_probs=26.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~   36 (291)
T cd05612           7 KTVGTGTFGRVHLVRDRISEHYYALKVMAI   36 (291)
T ss_pred             eeeecCCCeEEEEEEEcCCCCEEEEEEEEH
Confidence            679999999999999987788999999864

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=96.70  E-value=0.0044  Score=50.67  Aligned_cols=50  Identities=16%  Similarity=0.096  Sum_probs=35.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHH---HHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVA---LCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~---~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..+++|.+.........   .+....+.++|+|
T Consensus        14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~   66 (268)
T cd06624          14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRN   66 (268)
T ss_pred             EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCC
Confidence            5789999999999998877888999988654333322   3333444555554

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=96.69  E-value=0.0014  Score=61.27  Aligned_cols=48  Identities=17%  Similarity=0.237  Sum_probs=33.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHH---HHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLF---RDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~---~~Ir~~n~  166 (187)
                      ..||+|.||+||||+.-+   .||||.++.+.  ..+...|++|+   ++.||.|-
T Consensus       398 ~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NI  450 (678)
T KOG0193|consen  398 ERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENI  450 (678)
T ss_pred             ceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhh
Confidence            889999999999999854   59999986532  22444455554   45555553

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=96.68  E-value=0.0034  Score=53.13  Aligned_cols=30  Identities=17%  Similarity=0.192  Sum_probs=26.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|++..
T Consensus         6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   35 (338)
T cd07859           6 EVIGKGSYGVVCSAIDTHTGEKVAIKKIND   35 (338)
T ss_pred             EEEeecCCeEEEEEEECCCCCEEEEEEech
Confidence            679999999999999887789999999864

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=96.67  E-value=0.0036  Score=54.68  Aligned_cols=30  Identities=23%  Similarity=0.368  Sum_probs=27.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus         7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~   36 (381)
T cd05626           7 KTLGIGAFGEVCLACKVDTHALYAMKTLRK   36 (381)
T ss_pred             EEEeecCCEEEEEEEECCCCCEEEEEEEEH
Confidence            679999999999999988888999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=96.67  E-value=0.0018  Score=60.17  Aligned_cols=49  Identities=22%  Similarity=0.306  Sum_probs=39.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc-----cchhhHHHHHHHHHHHhCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL-----KHGKAVALCKGLFRDIRNP  164 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~-----~~~~~~~~~~~~~~~Ir~~  164 (187)
                      .+||.|-||.||-|..+.+|..||||.|.+     +.+.+...+.+.++.++||
T Consensus       570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HP  623 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHP  623 (888)
T ss_pred             hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCC
Confidence            889999999999999999999999999865     2344455566667777776

>PTZ00284 protein kinase; Provisional

Probab=96.67  E-value=0.0034  Score=56.53  Aligned_cols=50  Identities=18%  Similarity=0.296  Sum_probs=36.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n  165 (187)
                      .+||+|+||.||+|.....+..||||.+....  ......+...++++++.+
T Consensus       135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~  186 (467)
T PTZ00284        135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQAD  186 (467)
T ss_pred             EEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcC
Confidence            68999999999999988778899999985422  122334455566677655

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=96.65  E-value=0.003  Score=56.03  Aligned_cols=50  Identities=28%  Similarity=0.319  Sum_probs=33.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc-----hhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH-----GKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~-----~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|...+ ...+|||.+....     ......+...+..++|||.
T Consensus        47 ~~iG~G~~g~V~~~~~~g-~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNI  101 (362)
T KOG0192|consen   47 EVLGSGSFGTVYKGKWRG-TDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNI  101 (362)
T ss_pred             hhcccCCceeEEEEEeCC-ceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCe
Confidence            568999999999999975 2339999997533     1233344444445666554

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=96.65  E-value=0.0043  Score=52.79  Aligned_cols=30  Identities=23%  Similarity=0.277  Sum_probs=26.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||++....++..+|+|.+..
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~   30 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKK   30 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEH
Confidence            368999999999999887788999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=96.61  E-value=0.0042  Score=52.19  Aligned_cols=30  Identities=30%  Similarity=0.429  Sum_probs=26.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus        12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~   41 (309)
T cd07872          12 EKLGEGTYATVFKGRSKLTENLVALKEIRL   41 (309)
T ss_pred             EEecccCCEEEEEEEecCCCCeEEEEEeec
Confidence            789999999999999887788899999864

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=96.59  E-value=0.0042  Score=52.21  Aligned_cols=51  Identities=18%  Similarity=0.308  Sum_probs=35.6

Q ss_pred             cEEcccCCceEEEEEEcC--CCeeeeeeeecccc-hhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE--TNSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~--~~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~  166 (187)
                      .+||+|+||.||+|...+  ++..+|+|.+.... ......+....++++|+|.
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~ni   60 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNV   60 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCC
Confidence            679999999999998753  45689999986432 2223344556666777764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=96.59  E-value=0.0051  Score=52.45  Aligned_cols=30  Identities=23%  Similarity=0.274  Sum_probs=26.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~   30 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRK   30 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence            368999999999999887789999999865

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=96.57  E-value=0.0041  Score=53.12  Aligned_cols=30  Identities=23%  Similarity=0.392  Sum_probs=27.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~   53 (329)
T PTZ00263         24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKK   53 (329)
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEH
Confidence            789999999999999988888999999864

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=96.55  E-value=0.005  Score=51.61  Aligned_cols=51  Identities=18%  Similarity=0.274  Sum_probs=35.9

Q ss_pred             cEEcccCCceEEEEEEcC--CCeeeeeeeecccch-hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE--TNSFFSNWNVQLKHG-KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~--~~~~vavK~i~~~~~-~~~~~~~~~~~~Ir~~n~  166 (187)
                      .+||+|+||.||+|...+  ++..+|+|.+..... .....+....++++|+|.
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~ni   60 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNV   60 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCe
Confidence            579999999999999754  346799998865322 233344556667777764

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=96.54  E-value=0.0043  Score=51.43  Aligned_cols=28  Identities=29%  Similarity=0.528  Sum_probs=25.3

Q ss_pred             EcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          118 LGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       118 iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ||+|+||.||++..+.++..+|+|.+..
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~   28 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDK   28 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcH
Confidence            6999999999999988889999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=96.54  E-value=0.0029  Score=51.81  Aligned_cols=51  Identities=24%  Similarity=0.307  Sum_probs=40.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc-----hhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH-----GKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~-----~~~~~~~~~~~~~Ir~~n~  166 (187)
                      .+||+|.||+||||+-.+++..||+|++..+.     .+....+.-..+++.|+|.
T Consensus         8 ekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhkni   63 (292)
T KOG0662|consen    8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI   63 (292)
T ss_pred             HhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcce
Confidence            57999999999999999888999999985532     1344556667788888874

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=96.52  E-value=0.0066  Score=49.49  Aligned_cols=31  Identities=23%  Similarity=0.314  Sum_probs=27.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....++..+|+|.+...
T Consensus        15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~   45 (267)
T cd06646          15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLE   45 (267)
T ss_pred             heeecCCCeEEEEEEECCCCeEEEEEEEecC
Confidence            7899999999999998777889999988643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=96.51  E-value=0.0057  Score=50.50  Aligned_cols=30  Identities=27%  Similarity=0.336  Sum_probs=27.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+++...++..+|+|++..
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~   36 (287)
T cd07848           7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKD   36 (287)
T ss_pred             EEecccCCEEEEEEEECCCCcEEEEEEEec
Confidence            678999999999999988788999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=96.51  E-value=0.005  Score=51.62  Aligned_cols=51  Identities=18%  Similarity=0.295  Sum_probs=35.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh----hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK----AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~----~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|.+......    ....+....+.++|+|-
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni   65 (303)
T cd07869          11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANI   65 (303)
T ss_pred             eeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCc
Confidence            7899999999999999877889999998643211    22233344455666653

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=96.50  E-value=0.0062  Score=52.10  Aligned_cols=30  Identities=20%  Similarity=0.266  Sum_probs=26.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||++....++..+|+|.+..
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~   30 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKK   30 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence            468999999999999888789999999865

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=96.50  E-value=0.0051  Score=52.00  Aligned_cols=28  Identities=25%  Similarity=0.451  Sum_probs=25.2

Q ss_pred             EcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          118 LGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       118 iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ||+|+||.||++....++..+|+|.+..
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~   28 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRK   28 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEH
Confidence            6999999999999988788999999864

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PF03388 Lectin_leg-like: Legume-like lectin family; InterPro: IPR005052 Lectins are structurally diverse proteins that bind to specific carbohydrates

Probab=96.49  E-value=0.017  Score=47.91  Aligned_cols=71  Identities=24%  Similarity=0.233  Sum_probs=44.9

Q ss_pred             eccccCC-CceEEEEEEeeCCCceEEEEEEeC--CCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeeee
Q 047282            4 LRSDVKS-GRRNEAWISYNSSTHNLSVAFTGF--RNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWE   79 (187)
Q Consensus         4 ~~~~l~~-G~~~~awI~Yd~~~~~L~V~ls~~--~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~   79 (187)
                      |....++ +....+.|.|..  +.|.|.+...  .....-..++.  ++ .-.||+.-|+||||+||...+.|+|++-.
T Consensus       151 C~~~~rn~~~p~~~ri~Y~~--~~l~v~id~~~~~~~~~~~~Cf~--~~-~v~LP~~~yfGvSA~Tg~~~d~hdi~s~~  224 (229)
T PF03388_consen  151 CSADYRNSDVPTRIRISYSK--NTLTVSIDSNYLKNQDDWELCFT--TD-GVDLPEGYYFGVSAATGELSDNHDILSVK  224 (229)
T ss_dssp             EE---BTESSEEEEEEEEET--TEEEEEEETSCCSECCTTEEEEE--ES-TEEGGSSBEEEEEEEESSSGGEEEEEEEE
T ss_pred             ceeccCcCCCCEEEEEEEEC--CeEEEEEecccccCCcCCcEEEE--cC-CeecCCCCEEEEEecCCCCCCcEEEEEEE
Confidence            4445444 556789999997  5677777632  11111122333  22 22467778999999999999999999854

This family includes the VIP36 and ERGIC-53 lectins. These two proteins were the first members of the family of animal lectins similar to the leguminous plant lectins []. The alignment for this family is towards the N terminus, where the similarity of VIP36 and ERGIC-53 is greatest. Although they have been identified as a family of animal lectins, this alignment also includes yeast sequences[]. ERGIC-53 is a 53kDa protein, localised to the intermediate region between the endoplasmic reticulum and the Golgi apparatus (ER-Golgi-Intermediate Compartment, ERGIC). It was identified as a calcium-dependent, mannose-specific lectin []. Its dysfunction has been associated with combined factors V and VIII deficiency, suggesting an important and substrate-specific role for ERGIC-53 in the glycoprotein-secreting pathway [,]. The L-type lectin-like domain has an overall globular shape composed of a beta-sandwich of two major twisted antiparallel beta-sheets. The beta-sandwich comprises a major concave beta-sheet and a minor convex beta-sheet, in a variation of the jelly roll fold [, , , ]. ; GO: 0016020 membrane; PDB: 3A4U_A 3LCP_B 2A6Z_A 2A71_C 2A70_B 2A6Y_A 2A6X_A 2A6W_B 2A6V_B 2E6V_B ....

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=96.48  E-value=0.0057  Score=52.69  Aligned_cols=30  Identities=20%  Similarity=0.364  Sum_probs=27.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~   36 (364)
T cd05599           7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRK   36 (364)
T ss_pred             EEEEecCCEEEEEEEECCCCCEEEEEEEEH
Confidence            679999999999999987788999999864

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>PRK09188 serine/threonine protein kinase; Provisional

Probab=96.48  E-value=0.0058  Score=54.26  Aligned_cols=51  Identities=12%  Similarity=0.100  Sum_probs=34.0

Q ss_pred             cEEcccCCceEEEEEEcC-CCeeeeeeeeccc-----c---hhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE-TNSFFSNWNVQLK-----H---GKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-~~~~vavK~i~~~-----~---~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|.... ++..+|||++...     .   ......+...++.++|+|.
T Consensus        24 ~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~i   83 (365)
T PRK09188         24 AVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGV   83 (365)
T ss_pred             cEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCC
Confidence            889999999999998764 5677899987432     1   1123344445556666654

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.47  E-value=0.003  Score=57.29  Aligned_cols=49  Identities=16%  Similarity=0.190  Sum_probs=36.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHH--HHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFR--DIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~--~Ir~~n~  166 (187)
                      ..||+|.||.|++|..+  |..||||.++...+..-.++.+..+  -|||+|-
T Consensus       217 e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE~SWfrEtEIYqTvmLRHENI  267 (513)
T KOG2052|consen  217 EIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDERSWFRETEIYQTVMLRHENI  267 (513)
T ss_pred             EEecCccccceeecccc--CCceEEEEecccchhhhhhHHHHHHHHHhccchh
Confidence            88999999999999997  5679999997655544444444333  5888773

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=96.47  E-value=0.0042  Score=60.67  Aligned_cols=50  Identities=12%  Similarity=0.046  Sum_probs=36.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~  166 (187)
                      +.||+|+||.||+|....++..+|+|++...... ...+...+++++|||-
T Consensus       696 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~l~~l~HpnI  745 (968)
T PLN00113        696 NVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-PSSEIADMGKLQHPNI  745 (968)
T ss_pred             cEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-cHHHHHHHhhCCCCCc
Confidence            5799999999999998777889999998643321 1223455566666654

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.46  E-value=0.0016  Score=56.39  Aligned_cols=54  Identities=22%  Similarity=0.228  Sum_probs=37.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc--chhhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK--HGKAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~--~~~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      .+||+|.||.|||+....++..+|.|++.-.  ..++......++.-|++.||++.
T Consensus        25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNI   80 (375)
T KOG0591|consen   25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNI   80 (375)
T ss_pred             HHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchH
Confidence            7899999999999988777899999998532  22333334444554555555443

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=96.44  E-value=0.0057  Score=52.73  Aligned_cols=30  Identities=17%  Similarity=0.069  Sum_probs=27.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus        27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   56 (359)
T cd07876          27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSR   56 (359)
T ss_pred             EEeecCCCEEEEEEEEcCCCceeEEEEecc
Confidence            789999999999999887788999999854

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=96.44  E-value=0.0018  Score=61.26  Aligned_cols=60  Identities=17%  Similarity=0.155  Sum_probs=40.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc-hhhHHHHHHHHHHHhCCCCCCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTGPYGGEATGS  175 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~~~~~~~~~  175 (187)
                      ..||+|+||.||+|+.+.+|..||||.+.... .........+++-+++-||++-=-+++|
T Consensus        19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~i   79 (732)
T KOG4250|consen   19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDI   79 (732)
T ss_pred             hhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhccc
Confidence            77999999999999998899999999986522 2222233335555555555554444444

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.44  E-value=0.0019  Score=58.86  Aligned_cols=30  Identities=30%  Similarity=0.389  Sum_probs=27.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      .+||.|.||.||+|+-.+++..||||++..
T Consensus        16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~   45 (538)
T KOG0661|consen   16 RKLGDGTFGSVYLAKSKETGELVAIKKMKK   45 (538)
T ss_pred             HHhcCCcceeEEEeeecCCCceeeHHHHHh
Confidence            789999999999999988899999999965

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=96.42  E-value=0.0037  Score=55.11  Aligned_cols=50  Identities=18%  Similarity=0.311  Sum_probs=37.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch------hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG------KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~------~~~~~~~~~~~~Ir~~n  165 (187)
                      ++||+|+||.||..+..+++..+|+|.+.++..      .....+...+.+++||+
T Consensus        31 kviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPF   86 (357)
T KOG0598|consen   31 KVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPF   86 (357)
T ss_pred             eeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCc
Confidence            889999999999999999999999999976432      12234444555677764

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=96.39  E-value=0.0068  Score=52.81  Aligned_cols=30  Identities=23%  Similarity=0.337  Sum_probs=27.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus         7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~   36 (382)
T cd05625           7 KTLGIGAFGEVCLARKVDTKALYAMKTLRK   36 (382)
T ss_pred             EEEEeCCCEEEEEEEECCCCCEEEEEEEeH
Confidence            689999999999999888788999999865

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=96.38  E-value=0.0064  Score=51.93  Aligned_cols=50  Identities=10%  Similarity=0.173  Sum_probs=34.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-----hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-----KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-----~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++....++..+|+|++.....     .....+....+.++|+|
T Consensus        21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   75 (343)
T cd07878          21 TPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHEN   75 (343)
T ss_pred             eecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCc
Confidence            678999999999999887788999999864221     11222334455566655

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=96.38  E-value=0.0076  Score=51.35  Aligned_cols=30  Identities=23%  Similarity=0.366  Sum_probs=27.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus         7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~   36 (333)
T cd05600           7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKK   36 (333)
T ss_pred             EEEeecCCeEEEEEEECCCCCEEEEEEEEH
Confidence            679999999999999987788999999865

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=96.38  E-value=0.0083  Score=49.91  Aligned_cols=30  Identities=30%  Similarity=0.493  Sum_probs=26.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||++....++..+|+|.+..
T Consensus         6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~   35 (285)
T cd05632           6 RVLGKGGFGEVCACQVRATGKMYACKRLEK   35 (285)
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEeeh
Confidence            679999999999999987788999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=96.35  E-value=0.0082  Score=52.09  Aligned_cols=30  Identities=17%  Similarity=0.036  Sum_probs=26.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|++..
T Consensus         6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   35 (372)
T cd07853           6 RPIGYGAFGVVWSVTDPRDGKRVALKKMPN   35 (372)
T ss_pred             ceeeeCCCEEEEEEEECCCCCEEEEEeccc
Confidence            679999999999999887789999999854

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=96.35  E-value=0.0072  Score=49.17  Aligned_cols=49  Identities=22%  Similarity=0.351  Sum_probs=33.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n  165 (187)
                      .+||+|+||.||+|..++ +..+|+|.+.....  .....+....+.++|+|
T Consensus        12 ~~ig~G~~g~v~~~~~~~-~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~   62 (260)
T cd05067          12 KKLGAGQFGEVWMGYYNG-HTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPR   62 (260)
T ss_pred             eeeccCccceEEeeecCC-CceEEEEEecCCCCcHHHHHHHHHHHHhcCCcC
Confidence            689999999999999876 67899999865332  22233333444565554

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=96.33  E-value=0.0089  Score=49.26  Aligned_cols=30  Identities=23%  Similarity=0.389  Sum_probs=26.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~   35 (288)
T cd07863           6 AEIGVGAYGTVYKARDPHSGHFVALKSVRV   35 (288)
T ss_pred             eEEeecCCeEEEEEEECCCCcEEEEEEecc
Confidence            578999999999999988889999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=96.32  E-value=0.0083  Score=50.96  Aligned_cols=30  Identities=23%  Similarity=0.347  Sum_probs=26.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   30 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQK   30 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEH
Confidence            368999999999999988889999999865

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=96.32  E-value=0.0081  Score=51.22  Aligned_cols=30  Identities=20%  Similarity=0.243  Sum_probs=27.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~   36 (350)
T cd05573           7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRK   36 (350)
T ss_pred             EEEEeCCcEEEEEEEECCCCCEEEEEEEEH
Confidence            679999999999999987788999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=96.31  E-value=0.01  Score=49.22  Aligned_cols=54  Identities=24%  Similarity=0.285  Sum_probs=38.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      ..||.|+||.||+|....++..+++|.+..........+..+++.+++.+|++.
T Consensus        18 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i   71 (292)
T cd06644          18 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYI   71 (292)
T ss_pred             heecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcE
Confidence            789999999999999988788999999876544444444444444444444443

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=96.31  E-value=0.0088  Score=49.98  Aligned_cols=50  Identities=24%  Similarity=0.403  Sum_probs=35.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch----hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG----KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~----~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..+|+|.+.....    .....+....+.++|+|
T Consensus        12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~n   65 (301)
T cd07873          12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN   65 (301)
T ss_pred             eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCC
Confidence            679999999999999887788999998854322    12223344455566655

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=96.31  E-value=0.009  Score=48.27  Aligned_cols=29  Identities=31%  Similarity=0.473  Sum_probs=25.6

Q ss_pred             EEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          117 KLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       117 ~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      .||+|+||.||+|....++..+|+|.+..
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~   30 (252)
T cd05084           2 RIGRGNFGEVFSGRLRADNTPVAVKSCRE   30 (252)
T ss_pred             ccCcccCccEEEEEEecCCceEEEEecCc
Confidence            68999999999999987788999998754

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=96.31  E-value=0.0094  Score=50.69  Aligned_cols=30  Identities=23%  Similarity=0.273  Sum_probs=26.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~   30 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKK   30 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence            368999999999999877788999999865

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=96.30  E-value=0.0077  Score=52.27  Aligned_cols=30  Identities=23%  Similarity=0.315  Sum_probs=27.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~   36 (376)
T cd05598           7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRK   36 (376)
T ss_pred             EEEEeCCCeEEEEEEECCCCCEEEEEEEcH
Confidence            679999999999999888788999999854

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=96.29  E-value=0.0087  Score=49.11  Aligned_cols=54  Identities=15%  Similarity=0.075  Sum_probs=34.8

Q ss_pred             cEEcccCCceEEEEEEc---CCCeeeeeeeecccc-hhhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLR---ETNSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~---~~~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      +.||+|+||.||+|...   ..+..+|+|.+.... ......+..+++.+++-.|++.
T Consensus        11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i   68 (266)
T cd05064          11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNI   68 (266)
T ss_pred             eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCc
Confidence            78999999999999864   235689999886532 2222334445555544444443

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=96.28  E-value=0.0083  Score=49.77  Aligned_cols=28  Identities=32%  Similarity=0.615  Sum_probs=25.2

Q ss_pred             EcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          118 LGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       118 iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ||+|+||.||++....++..+|+|.+..
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~   28 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNK   28 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeH
Confidence            6999999999999887788999999865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=96.28  E-value=0.008  Score=55.13  Aligned_cols=59  Identities=25%  Similarity=0.214  Sum_probs=41.5

Q ss_pred             cEEcccCCceEEEEEEcCCC---ee-eeeeeecc---cchhhHHHHHHHHHHHhCCCCCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETN---SF-FSNWNVQL---KHGKAVALCKGLFRDIRNPTGPYGGEATG  174 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~---~~-vavK~i~~---~~~~~~~~~~~~~~~Ir~~n~~~~~~~~~  174 (187)
                      .+||+|.||.||+|.+...+   .. ||+|....   ..+.+.+++..|.+-+|+-+|+|.--.-|
T Consensus       163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG  228 (474)
T KOG0194|consen  163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG  228 (474)
T ss_pred             ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence            89999999999999986532   23 89998864   33556666777777777777766543333

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=96.27  E-value=0.0068  Score=54.13  Aligned_cols=50  Identities=18%  Similarity=0.205  Sum_probs=38.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch------hhHHHHHHHHHHHh-CCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG------KAVALCKGLFRDIR-NPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~------~~~~~~~~~~~~Ir-~~n  165 (187)
                      ..||+|.||.||+++.+.++..+|+|.+.+...      .....+...++.|. |||
T Consensus        41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpn   97 (382)
T KOG0032|consen   41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPN   97 (382)
T ss_pred             hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCC
Confidence            889999999999999999899999999976433      24445555666666 555

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=96.27  E-value=0.01  Score=49.39  Aligned_cols=30  Identities=30%  Similarity=0.499  Sum_probs=26.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      .+||+|+||.||++....++..+|+|.+..
T Consensus         6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   35 (285)
T cd05605           6 RVLGKGGFGEVCACQVRATGKMYACKKLEK   35 (285)
T ss_pred             EEEecCCCeEEEEEEEcCCCceEEEEEEeh
Confidence            679999999999999877788999999865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=96.27  E-value=0.0096  Score=50.45  Aligned_cols=30  Identities=27%  Similarity=0.369  Sum_probs=26.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ++||+|+||.||++....++..+|+|.+..
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~   30 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQK   30 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence            368999999999999988788999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=96.25  E-value=0.011  Score=48.82  Aligned_cols=53  Identities=23%  Similarity=0.242  Sum_probs=36.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|....++..+++|.+..........+..+++.+++..|++
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~   63 (282)
T cd06643          11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN   63 (282)
T ss_pred             hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCC
Confidence            56899999999999998878889999986544433333444444444434443

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=96.25  E-value=0.01  Score=51.87  Aligned_cols=54  Identities=11%  Similarity=0.078  Sum_probs=37.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc---hhhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH---GKAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~---~~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      ..||+|+||.||++....++..+|+|.+....   ......+..++..+++.++++.
T Consensus        49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~i  105 (370)
T cd05596          49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWI  105 (370)
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCc
Confidence            78999999999999998888899999986422   1122223344555555555544

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=96.25  E-value=0.0019  Score=54.46  Aligned_cols=32  Identities=19%  Similarity=0.153  Sum_probs=28.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH  147 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~  147 (187)
                      ..||+|.||.||.|+.+.++..+|+|.+.++.
T Consensus        28 r~LgkgkFG~vYlarekks~~IvalKVlfKsq   59 (281)
T KOG0580|consen   28 RPLGKGKFGNVYLAREKKSLFIVALKVLFKSQ   59 (281)
T ss_pred             ccccCCccccEeEeeeccCCcEEEEeeeeHHH
Confidence            78999999999999999888999999997643

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=96.23  E-value=0.01  Score=50.73  Aligned_cols=30  Identities=20%  Similarity=0.340  Sum_probs=27.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~   36 (331)
T cd05597           7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNK   36 (331)
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEH
Confidence            679999999999999988788999999864

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=96.22  E-value=0.01  Score=47.79  Aligned_cols=30  Identities=20%  Similarity=0.353  Sum_probs=26.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||++....++..+|+|.+..
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~   35 (257)
T cd08225           6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDL   35 (257)
T ss_pred             EEecCCCcceEEEEEEcCCCceEEEEEeeH
Confidence            679999999999999988788999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=96.22  E-value=0.011  Score=51.49  Aligned_cols=30  Identities=20%  Similarity=0.329  Sum_probs=27.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~   36 (377)
T cd05629           7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLK   36 (377)
T ss_pred             EEEeecCCEEEEEEEECCCCCEEEEEEEEH
Confidence            679999999999999888888999999854

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=96.21  E-value=0.013  Score=47.45  Aligned_cols=53  Identities=21%  Similarity=0.255  Sum_probs=36.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc---hhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH---GKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~---~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      +.||.|+||.||++....++..+|+|.+....   .........+++.+++-+|+|
T Consensus         6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~   61 (258)
T cd05578           6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPF   61 (258)
T ss_pred             EEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCC
Confidence            67999999999999998778899999986532   122333444444444444443

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=96.20  E-value=0.011  Score=50.22  Aligned_cols=30  Identities=23%  Similarity=0.293  Sum_probs=27.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus         6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~   35 (324)
T cd05587           6 MVLGKGSFGKVMLAERKGTDELYAIKILKK   35 (324)
T ss_pred             EEEeeccCeEEEEEEECCCCCEEEEEEEEH
Confidence            679999999999999988788899999865

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=96.19  E-value=0.011  Score=50.97  Aligned_cols=31  Identities=23%  Similarity=0.259  Sum_probs=27.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      +.||+|+||.||++....++..+|+|.+...
T Consensus        80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~  110 (353)
T PLN00034         80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGN  110 (353)
T ss_pred             hhccCCCCeEEEEEEECCCCCEEEEEEEecC
Confidence            7899999999999998877889999998543

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=96.19  E-value=0.013  Score=47.02  Aligned_cols=30  Identities=37%  Similarity=0.618  Sum_probs=26.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+++|.+..
T Consensus         6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~   35 (258)
T cd06632           6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSL   35 (258)
T ss_pred             ceeeecCCceEEEEEEcCCCcEEEEEEEEE
Confidence            578999999999999986688999998854

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=96.18  E-value=0.012  Score=50.51  Aligned_cols=52  Identities=13%  Similarity=0.058  Sum_probs=37.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhh---HHHHHHHHHHHhCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKA---VALCKGLFRDIRNPTGP  167 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~---~~~~~~~~~~Ir~~n~~  167 (187)
                      ..||.|+||.||+|....++..+|+|.+.......   ...+....+.++|+|..
T Consensus        11 ~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~   65 (342)
T cd07854          11 RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIV   65 (342)
T ss_pred             EEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcch
Confidence            77899999999999998878899999985543322   23344455566676543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>PHA03212 serine/threonine kinase US3; Provisional

Probab=96.18  E-value=0.0087  Score=52.93  Aligned_cols=48  Identities=17%  Similarity=0.015  Sum_probs=36.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++....++..+|+|....   .....+...++.|+|+|-
T Consensus        98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---~~~~~E~~il~~l~HpnI  145 (391)
T PHA03212         98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQR---GGTATEAHILRAINHPSI  145 (391)
T ss_pred             EEEcCCCCeEEEEEEECCCCCEEEEechhh---hhhHHHHHHHHhCCCCCC
Confidence            789999999999999988888999997643   223345556667777665

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=96.18  E-value=0.011  Score=53.98  Aligned_cols=48  Identities=17%  Similarity=0.039  Sum_probs=33.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRN  163 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~  163 (187)
                      ..||+|+||.||++....++..+|+|.+....  .........++..+.+
T Consensus        38 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~   87 (496)
T PTZ00283         38 RVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLN   87 (496)
T ss_pred             EEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhc
Confidence            78999999999999988778999999986532  2222333444444443

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=96.17  E-value=0.011  Score=49.70  Aligned_cols=50  Identities=16%  Similarity=0.098  Sum_probs=34.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHH---HHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFR---DIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~---~Ir~~n  165 (187)
                      ..||+|+||.||++....++..+|+|.+.............++.   .++|+|
T Consensus        27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~   79 (297)
T cd06659          27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQN   79 (297)
T ss_pred             hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCc
Confidence            67899999999999987778899999986533322223333333   455554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=96.16  E-value=0.014  Score=48.96  Aligned_cols=51  Identities=20%  Similarity=0.147  Sum_probs=34.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++....++..+|+|.+.............++..++...|
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h   75 (297)
T cd06656          25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKN   75 (297)
T ss_pred             eeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCC
Confidence            779999999999999877788999999865433322233333333333333

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=96.16  E-value=0.011  Score=50.13  Aligned_cols=31  Identities=19%  Similarity=0.281  Sum_probs=27.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++....++..+|+|.+...
T Consensus         7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~   37 (330)
T cd05601           7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKS   37 (330)
T ss_pred             EEEEeccCEEEEEEEECCCCCEEEEEEEEHH
Confidence            6799999999999999888889999998653

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=96.16  E-value=0.01  Score=47.83  Aligned_cols=30  Identities=30%  Similarity=0.430  Sum_probs=25.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      .+||+|+||.||+|...+ +..+|+|.+...
T Consensus         1 ~~ig~g~~g~vy~~~~~~-~~~~a~K~~~~~   30 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKD-KTPVAVKTCKED   30 (250)
T ss_pred             CccCCCCCceEEEEEecC-CcEEEEEecCCc
Confidence            368999999999999865 778999988653

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=96.15  E-value=0.0079  Score=54.17  Aligned_cols=50  Identities=18%  Similarity=0.329  Sum_probs=39.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch----------hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG----------KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~----------~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.|-.|.-+.+|..||||.+++...          .....+.+.+++|+|||
T Consensus       178 ~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~  237 (475)
T KOG0615|consen  178 KTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPN  237 (475)
T ss_pred             eeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCC
Confidence            889999999999999999999999999975321          12245666777788876

>cd06903 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmembrane proteins, N-terminal lectin domain

Probab=96.14  E-value=0.026  Score=46.66  Aligned_cols=63  Identities=19%  Similarity=0.240  Sum_probs=44.1

Q ss_pred             CCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCC-ceeEEEEEeecCCCccccceeeeeec
Q 047282            9 KSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLP-EFVTFGFSMETGVDFTIFSIYLWEFN   81 (187)
Q Consensus         9 ~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~-~~v~VGFSasTG~~~~~h~i~sW~F~   81 (187)
                      ..+.+.++.|.|+...+.|+|.+..       +.++..  + .-.|| .-.|+||||+||...+.|+|++-.+.
T Consensus       149 n~~~p~~iri~Y~~~~~~l~v~vd~-------~~Cf~~--~-~v~lP~~~y~fGiSAaTg~~~d~hdIl~~~~~  212 (215)
T cd06903         149 DSGVPSTIRLSYDALNSLFKVQVDN-------RLCFQT--D-KVQLPQGGYRFGITAANADNPESFEILKLKVW  212 (215)
T ss_pred             CCCCCEEEEEEEECCCCEEEEEECC-------CEEEec--C-CeecCCCCCEEEEEEcCCCCCCcEEEEEEEEe
Confidence            3455789999999877888888742       112221  1 12345 45679999999999999999986654

EMP46 and EMP47, N-terminal carbohydrate recognition domain. EMP46 and EMP47 are fungal type-I transmembrane proteins that cycle between the endoplasmic reticulum and the golgi apparatus and are thought to function as cargo receptors that transport newly synthesized glycoproteins. EMP47 is a receptor for EMP46 responsible for the selective transport of EMP46 by forming hetero-oligomerization between the two proteins. EMP46 and EMP47 have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. EMP46 and EMP47 are 45% sequence-identical to one another and have sequence homology to a class of intracellular lectins defined by ERGIC-53 and VIP36. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat s

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=96.14  E-value=0.012  Score=48.79  Aligned_cols=30  Identities=30%  Similarity=0.528  Sum_probs=27.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||+|....++..+|+|.+..
T Consensus        13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~   42 (302)
T cd07864          13 GQIGEGTYGQVYKARDKDTGELVALKKVRL   42 (302)
T ss_pred             eeecccCCEEEEEEEECCCCcEEEEEEEee
Confidence            788999999999999988788999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=96.12  E-value=0.014  Score=46.40  Aligned_cols=53  Identities=21%  Similarity=0.310  Sum_probs=36.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|++|.||+|....++..+++|.+.....  ........++..+++-++++
T Consensus         6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~   60 (260)
T cd06606           6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPN   60 (260)
T ss_pred             eEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCC
Confidence            678999999999999987788999999865432  23334444444444444443

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=96.11  E-value=0.0093  Score=50.67  Aligned_cols=30  Identities=37%  Similarity=0.510  Sum_probs=26.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~   30 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKK   30 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEH
Confidence            368999999999999988788999999865

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=96.11  E-value=0.016  Score=47.75  Aligned_cols=30  Identities=33%  Similarity=0.479  Sum_probs=26.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||.|+||.||+|....++..+|+|.+..
T Consensus        10 ~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~   39 (277)
T cd06641          10 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDL   39 (277)
T ss_pred             eeEeecCCeEEEEEEECCCCcEEEEEEecc
Confidence            678999999999999877688999998754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=96.11  E-value=0.015  Score=47.54  Aligned_cols=50  Identities=18%  Similarity=0.356  Sum_probs=35.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhh---HHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKA---VALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~---~~~~~~~~~~Ir~~n  165 (187)
                      ..||.|+||.||+|....++..+|+|.+....  ...   ...+....+.++|+|
T Consensus         5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~   59 (287)
T cd07840           5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPN   59 (287)
T ss_pred             EEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCC
Confidence            57899999999999998778899999997542  111   222333445566665

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=96.10  E-value=0.016  Score=47.63  Aligned_cols=50  Identities=22%  Similarity=0.350  Sum_probs=35.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh----hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK----AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~----~~~~~~~~~~~Ir~~n  165 (187)
                      +.||.|++|.||+|+...++..+|+|.+......    ....+....+.++|+|
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~   59 (284)
T cd07836           6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHEN   59 (284)
T ss_pred             eeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCC
Confidence            6799999999999999887899999998653221    1122334445566655

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=96.10  E-value=0.011  Score=50.72  Aligned_cols=51  Identities=10%  Similarity=-0.019  Sum_probs=35.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hh---hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GK---AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~---~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++.....+..+|+|++....  ..   ....+....+.++|+|-
T Consensus        23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni   78 (355)
T cd07874          23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI   78 (355)
T ss_pred             EEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCch
Confidence            77999999999999987778899999986421  11   22223334455666654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=96.09  E-value=0.0027  Score=57.88  Aligned_cols=43  Identities=21%  Similarity=0.221  Sum_probs=34.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHH
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRD  160 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~  160 (187)
                      .+||+|.||.||||.+.  +..||||.+.....+....+.+....
T Consensus       216 eli~~Grfg~V~KaqL~--~~~VAVKifp~~~kqs~~~Ek~Iy~l  258 (534)
T KOG3653|consen  216 ELIGRGRFGCVWKAQLD--NRLVAVKIFPEQEKQSFQNEKNIYSL  258 (534)
T ss_pred             HHhhcCccceeehhhcc--CceeEEEecCHHHHHHHHhHHHHHhc
Confidence            88999999999999996  47899999987666666656555554

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=96.09  E-value=0.014  Score=49.96  Aligned_cols=30  Identities=20%  Similarity=0.346  Sum_probs=26.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~   36 (331)
T cd05624           7 KVIGRGAFGEVAVVKMKHTERIYAMKILNK   36 (331)
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEeH
Confidence            679999999999999988788899998864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=96.09  E-value=0.017  Score=47.75  Aligned_cols=31  Identities=26%  Similarity=0.269  Sum_probs=26.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....++..+|+|.+...
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~   37 (279)
T cd06619           7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLD   37 (279)
T ss_pred             eeeccCCCeEEEEEEEcCCCcEEEEEEEecC
Confidence            5789999999999998777889999988643

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=96.09  E-value=0.012  Score=47.95  Aligned_cols=31  Identities=23%  Similarity=0.289  Sum_probs=27.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....++..+|+|.+...
T Consensus        12 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~   42 (272)
T cd06637          12 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT   42 (272)
T ss_pred             HheeecCCeEEEEEEEcCCCcEEEEEEEEcC
Confidence            6789999999999999887889999998643

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=96.09  E-value=0.014  Score=47.84  Aligned_cols=31  Identities=26%  Similarity=0.371  Sum_probs=27.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++....++..+|+|++...
T Consensus         7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~   37 (283)
T cd06617           7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRAT   37 (283)
T ss_pred             EEecccCCeEEEEEEEcCCCcEEEEEEEecC
Confidence            5789999999999999887899999988653

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=96.07  E-value=0.013  Score=48.16  Aligned_cols=50  Identities=20%  Similarity=0.328  Sum_probs=34.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-----hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-----KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-----~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||.|+||.||+|+...++..+|+|++..+..     .....+....+.++|+|
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   60 (284)
T cd07860           6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN   60 (284)
T ss_pred             eeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCC
Confidence            578999999999999887788999998864321     12223334445555554

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=96.05  E-value=0.0099  Score=55.00  Aligned_cols=31  Identities=26%  Similarity=0.318  Sum_probs=24.5

Q ss_pred             cEEcccCCceEEEEEEcC----------------CCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRE----------------TNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~----------------~~~~vavK~i~~~  146 (187)
                      ++||+|+||.||+|....                .+..||||++...
T Consensus       151 ~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~  197 (507)
T PLN03224        151 DKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMD  197 (507)
T ss_pred             eEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEeccc
Confidence            899999999999997521                2357999998653

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=96.05  E-value=0.01  Score=50.50  Aligned_cols=30  Identities=23%  Similarity=0.293  Sum_probs=27.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~   35 (323)
T cd05615           6 MVLGKGSFGKVMLAERKGTDELYAIKILKK   35 (323)
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEH
Confidence            679999999999999888888999999865

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=96.04  E-value=0.015  Score=49.04  Aligned_cols=30  Identities=27%  Similarity=0.328  Sum_probs=24.2

Q ss_pred             cEEcccCCceEEEEEEcCCCe----eeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNS----FFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~----~vavK~i~~  145 (187)
                      +.||+|+||.||+|+...++.    .+|+|.+..
T Consensus        13 ~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~   46 (316)
T cd05108          13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE   46 (316)
T ss_pred             eeeecCCCceEEEEEEecCCCccceeEEEEeccc
Confidence            789999999999998755444    389998854

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=96.04  E-value=0.017  Score=48.26  Aligned_cols=50  Identities=22%  Similarity=0.280  Sum_probs=34.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHH---HHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKG---LFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~---~~~~Ir~~n  165 (187)
                      ..||+|+||.||++....++..+++|.+.............   ..+.++|+|
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~   77 (293)
T cd06647          25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPN   77 (293)
T ss_pred             eEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCC
Confidence            77899999999999987667889999986533332222333   344555555

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=96.03  E-value=0.014  Score=49.66  Aligned_cols=30  Identities=20%  Similarity=0.226  Sum_probs=26.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||++....++..+|+|.+..
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~   30 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQK   30 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEH
Confidence            368999999999999887788999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=96.03  E-value=0.011  Score=47.99  Aligned_cols=30  Identities=23%  Similarity=0.238  Sum_probs=26.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus         8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~   37 (267)
T cd08228           8 KKIGRGQFSEVYRATCLLDRKPVALKKVQI   37 (267)
T ss_pred             eeeccCCCeeEEEEEEeCCCCEEEEEEeec
Confidence            679999999999999887788999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=96.03  E-value=0.015  Score=48.78  Aligned_cols=51  Identities=16%  Similarity=0.145  Sum_probs=34.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++....++..+|+|++.............++..+++.++
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h   76 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH   76 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCC
Confidence            568999999999999987789999999854333333333333333333333

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=96.02  E-value=0.014  Score=48.50  Aligned_cols=31  Identities=29%  Similarity=0.351  Sum_probs=27.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....++..+|+|.+...
T Consensus         6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~   36 (298)
T cd07841           6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLG   36 (298)
T ss_pred             eeeeeccccEEEEEEECCCCcEEEEEEEecc
Confidence            5789999999999998877889999998653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=96.02  E-value=0.013  Score=49.96  Aligned_cols=30  Identities=17%  Similarity=0.247  Sum_probs=26.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      .+||+|+||.||++....++..+|+|.+..
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~   30 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKK   30 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEH
Confidence            368999999999999988788999999865

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=96.02  E-value=0.014  Score=48.37  Aligned_cols=50  Identities=20%  Similarity=0.343  Sum_probs=35.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-h---hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-K---AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-~---~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..+|+|.+..... .   ....+....+.++|+|
T Consensus        11 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~n   64 (291)
T cd07870          11 EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHAN   64 (291)
T ss_pred             EEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCC
Confidence            679999999999999887788999999854322 1   2223344555666665

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=96.02  E-value=0.017  Score=46.97  Aligned_cols=30  Identities=30%  Similarity=0.428  Sum_probs=24.6

Q ss_pred             cEEcccCCceEEEEEEcCC---Ceeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRET---NSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~---~~~vavK~i~~  145 (187)
                      +.||+|+||.||+|.+..+   +..+|+|++..
T Consensus         5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~   37 (273)
T cd05035           5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKL   37 (273)
T ss_pred             cccCcCCCceEEEEEEecCCCCcceEEEEEecc
Confidence            6789999999999998642   35799999864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=96.01  E-value=0.016  Score=47.70  Aligned_cols=50  Identities=16%  Similarity=0.308  Sum_probs=33.7

Q ss_pred             cEEcccCCceEEEEEEc----CCCeeeeeeeecccchhhHHHHH---HHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLR----ETNSFFSNWNVQLKHGKAVALCK---GLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~----~~~~~vavK~i~~~~~~~~~~~~---~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++...    .++..+|+|++..........+.   ...+.++|+|
T Consensus        10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~   66 (284)
T cd05081          10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDN   66 (284)
T ss_pred             eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCC
Confidence            67899999999999753    34678999998654443333333   3444566655

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=96.01  E-value=0.013  Score=47.50  Aligned_cols=49  Identities=20%  Similarity=0.287  Sum_probs=33.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|...+ +..+|+|.+.....  .....+....+.++|+|
T Consensus        12 ~~lg~g~~g~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~   62 (261)
T cd05072          12 KKLGAGQFGEVWMGYYNN-STKVAVKTLKPGTMSVQAFLEEANLMKTLQHDK   62 (261)
T ss_pred             eecCCcCCceEEEEEecC-CceEEEEEccCCchhHHHHHHHHHHHHhCCCCC
Confidence            789999999999999765 67799998864332  22233334444555554

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=96.00  E-value=0.01  Score=50.34  Aligned_cols=31  Identities=26%  Similarity=0.367  Sum_probs=27.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ++||+|+||.||+|....++..+|+|.+...
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~   31 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKD   31 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHH
Confidence            3689999999999999887889999998653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=96.00  E-value=0.018  Score=47.09  Aligned_cols=53  Identities=19%  Similarity=0.150  Sum_probs=33.9

Q ss_pred             cEEcccCCceEEEEEEcCCCe---eeeeeeecccc-hhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNS---FFSNWNVQLKH-GKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~---~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      +.||+|+||.||+|....++.   .+|+|.+.... ......+..+++.+++..++|
T Consensus        10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~n   66 (269)
T cd05065          10 EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN   66 (269)
T ss_pred             eEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcC
Confidence            789999999999999875443   59999986532 222333444444444444443

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=96.00  E-value=0.0095  Score=47.71  Aligned_cols=30  Identities=10%  Similarity=-0.083  Sum_probs=26.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|..+ +|..+|+|.+...
T Consensus         3 ~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~   32 (190)
T cd05147           3 GCISTGKEANVYHATTA-NGEERAIKIYKTS   32 (190)
T ss_pred             CccccccceEEEEEECC-CCCEEEEEEEEec
Confidence            46899999999999987 5899999998653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=95.99  E-value=0.015  Score=47.64  Aligned_cols=31  Identities=29%  Similarity=0.383  Sum_probs=27.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|+...++..+++|++...
T Consensus         5 ~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~   35 (283)
T cd07830           5 KQLGDGTFGSVYLARNKETGELVAIKKMKKK   35 (283)
T ss_pred             eeeccCCceEEEEEEECCCCcEEEEEEehhh
Confidence            6789999999999999877888999998653

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=95.99  E-value=0.013  Score=49.96  Aligned_cols=30  Identities=17%  Similarity=0.212  Sum_probs=27.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus        11 ~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~   40 (336)
T cd07849          11 SYIGEGAYGMVCSATHKPTGVKVAIKKISP   40 (336)
T ss_pred             EEEEecCCeEEEEEEEcCCCCeEEEEEecc
Confidence            789999999999999887789999999864

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=95.98  E-value=0.015  Score=49.91  Aligned_cols=50  Identities=16%  Similarity=0.189  Sum_probs=35.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--h---hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--G---KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~---~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++....++..+|+|++....  .   .....+....+.++|+|
T Consensus        23 ~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~   77 (345)
T cd07877          23 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN   77 (345)
T ss_pred             EEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCc
Confidence            67899999999999987778899999986422  1   11222334455666666

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=95.98  E-value=0.017  Score=49.48  Aligned_cols=30  Identities=20%  Similarity=0.265  Sum_probs=26.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||++....++..+|+|.+..
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~   30 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKK   30 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEh
Confidence            469999999999999988788999999865

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=95.97  E-value=0.018  Score=47.92  Aligned_cols=30  Identities=30%  Similarity=0.499  Sum_probs=27.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~   35 (285)
T cd05630           6 RVLGKGGFGEVCACQVRATGKMYACKKLEK   35 (285)
T ss_pred             EEeecCCCeEEEEEEEcCCCceEEEEEEeh
Confidence            579999999999999988888999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=95.97  E-value=0.017  Score=46.88  Aligned_cols=30  Identities=20%  Similarity=0.276  Sum_probs=26.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~   35 (268)
T cd06630           6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTY   35 (268)
T ss_pred             ceecCcCceEEEEEEEcCCCcEEEEEEeec
Confidence            678999999999999877788999998864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=95.96  E-value=0.012  Score=49.99  Aligned_cols=30  Identities=27%  Similarity=0.499  Sum_probs=26.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||.|+||.||++....++..+|+|.+..
T Consensus        15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~   44 (335)
T PTZ00024         15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKI   44 (335)
T ss_pred             hcccCCCceeEEEEEECCCCCeEEEEEeec
Confidence            678999999999999887788999998854

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=95.96  E-value=0.016  Score=50.25  Aligned_cols=30  Identities=20%  Similarity=0.314  Sum_probs=27.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~   36 (363)
T cd05628           7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRK   36 (363)
T ss_pred             EEEEeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence            679999999999999887788999999865

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=95.96  E-value=0.019  Score=48.96  Aligned_cols=53  Identities=17%  Similarity=0.176  Sum_probs=35.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-hhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-KAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||++....++..+|+|.+..... ........+++.++.-++++
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~   64 (331)
T cd06649          11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY   64 (331)
T ss_pred             EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCC
Confidence            678999999999999988788899998865322 12223333444444444443

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=95.96  E-value=0.013  Score=49.80  Aligned_cols=31  Identities=23%  Similarity=0.289  Sum_probs=27.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++....++..+|+|.+...
T Consensus         6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~   36 (323)
T cd05616           6 MVLGKGSFGKVMLAERKGTDELYAIKILKKD   36 (323)
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEHH
Confidence            6799999999999999887889999998653

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=95.96  E-value=0.02  Score=46.73  Aligned_cols=52  Identities=15%  Similarity=0.113  Sum_probs=33.5

Q ss_pred             cEEcccCCceEEEEEEcC----CCeeeeeeeecccchh-hHHHHHHHHHHHhCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE----TNSFFSNWNVQLKHGK-AVALCKGLFRDIRNPTGP  167 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~----~~~~vavK~i~~~~~~-~~~~~~~~~~~Ir~~n~~  167 (187)
                      ..||+|+||.||++....    .+..+|+|.+...... ....+..+++.++.-.++
T Consensus        10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~   66 (284)
T cd05038          10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHE   66 (284)
T ss_pred             eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCC
Confidence            678999999999998753    2578999998654332 233344444444443333

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=95.93  E-value=0.017  Score=46.87  Aligned_cols=49  Identities=18%  Similarity=0.212  Sum_probs=34.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++...+ +..+|+|.+....  ......+....++++|+|
T Consensus        10 ~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~   60 (256)
T cd05114          10 KELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPK   60 (256)
T ss_pred             eEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHCCCCC
Confidence            679999999999999875 5679999875432  223334445556666665

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=95.93  E-value=0.016  Score=49.20  Aligned_cols=31  Identities=35%  Similarity=0.486  Sum_probs=27.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....++..+|+|.+...
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~   31 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKD   31 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHH
Confidence            3689999999999999887889999998653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=95.93  E-value=0.013  Score=48.11  Aligned_cols=50  Identities=16%  Similarity=0.266  Sum_probs=33.6

Q ss_pred             cEEcccCCceEEEEEEc----CCCeeeeeeeecccc-hhhHHHHHHHHH---HHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLR----ETNSFFSNWNVQLKH-GKAVALCKGLFR---DIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~----~~~~~vavK~i~~~~-~~~~~~~~~~~~---~Ir~~n  165 (187)
                      ..||.|.||.||+|...    ..+..|+||.+.... ......+..+++   .++|+|
T Consensus         5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~n   62 (259)
T PF07714_consen    5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPN   62 (259)
T ss_dssp             EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTT
T ss_pred             eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccc
Confidence            67999999999999997    235689999995422 222334444444   455554

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=95.92  E-value=0.018  Score=49.14  Aligned_cols=30  Identities=23%  Similarity=0.373  Sum_probs=26.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~   36 (332)
T cd05623           7 KVIGRGAFGEVAVVKLKNADKVFAMKILNK   36 (332)
T ss_pred             EEEEeCCCeEEEEEEECCCCCEEEEEEEeH
Confidence            679999999999999988788899999854

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=95.91  E-value=0.017  Score=49.03  Aligned_cols=30  Identities=23%  Similarity=0.353  Sum_probs=26.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~   30 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQK   30 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEH
Confidence            368999999999999987788899999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=95.90  E-value=0.015  Score=50.87  Aligned_cols=30  Identities=17%  Similarity=0.274  Sum_probs=27.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus        49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~   78 (370)
T cd05621          49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSK   78 (370)
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEH
Confidence            789999999999999988788999998854

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=95.89  E-value=0.017  Score=47.41  Aligned_cols=30  Identities=27%  Similarity=0.313  Sum_probs=26.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||+|....++..+|+|++..
T Consensus         7 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~   36 (286)
T cd07846           7 GLVGEGSYGMVMKCKHKETGQIVAIKKFLE   36 (286)
T ss_pred             eeeccCCCeEEEEEEECCCCCEEEEEeHhh
Confidence            689999999999999987788999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=95.89  E-value=0.017  Score=47.42  Aligned_cols=30  Identities=30%  Similarity=0.495  Sum_probs=26.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|+...++..+|+|.+..
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~   35 (285)
T cd07861           6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRL   35 (285)
T ss_pred             eEecccCceEEEEEEECCCCcEEEEEEecc
Confidence            678999999999999987788999998854

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=95.89  E-value=0.013  Score=49.90  Aligned_cols=30  Identities=27%  Similarity=0.423  Sum_probs=26.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||++....++..+|+|.+..
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~   30 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKK   30 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEH
Confidence            368999999999999988788999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=95.88  E-value=0.018  Score=47.80  Aligned_cols=51  Identities=22%  Similarity=0.274  Sum_probs=36.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh-----hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK-----AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~-----~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++....++..+|+|.+......     ....+....+.++|+|-
T Consensus        18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i   73 (310)
T cd07865          18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENV   73 (310)
T ss_pred             EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCc
Confidence            6789999999999999888899999988543211     11223445556777653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=95.88  E-value=0.023  Score=49.08  Aligned_cols=30  Identities=13%  Similarity=0.051  Sum_probs=27.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++.....+..+|+|++..
T Consensus        30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   59 (364)
T cd07875          30 KPIGSGAQGIVCAAYDAILERNVAIKKLSR   59 (364)
T ss_pred             EEeecCCCeEEEEEEECCCCcEEEEEEeCc
Confidence            789999999999999887788999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=95.87  E-value=0.017  Score=47.69  Aligned_cols=50  Identities=24%  Similarity=0.402  Sum_probs=34.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch----hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG----KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~----~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|..+.++..+|+|.+.....    .....+....+.++|+|
T Consensus        11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~   64 (291)
T cd07844          11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHAN   64 (291)
T ss_pred             EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcc
Confidence            679999999999999887788999999864322    12223344455566654

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=95.87  E-value=0.022  Score=46.02  Aligned_cols=54  Identities=15%  Similarity=0.237  Sum_probs=37.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh--hHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK--AVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~--~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      ..||+|+||.||+|....++..+++|.+......  .......+++.+++-++++.
T Consensus         6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i   61 (264)
T cd06626           6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNL   61 (264)
T ss_pred             eEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCCh
Confidence            6799999999999998777889999998654332  33334444454554444443

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=95.85  E-value=0.017  Score=48.45  Aligned_cols=51  Identities=16%  Similarity=0.275  Sum_probs=36.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh-----hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK-----AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~-----~~~~~~~~~~~Ir~~n~  166 (187)
                      +.||+|+||.||+|....++..+|+|.+......     ....+....+.++|+|-
T Consensus        13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   68 (309)
T cd07845          13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNI   68 (309)
T ss_pred             eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCC
Confidence            7799999999999999887899999998543211     12233445556776653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=95.85  E-value=0.0069  Score=53.17  Aligned_cols=51  Identities=24%  Similarity=0.419  Sum_probs=38.9

Q ss_pred             cEEcccCCceEEEEEEcCCCe----eeeeeeecccc-----hhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNS----FFSNWNVQLKH-----GKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~----~vavK~i~~~~-----~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|.||.|||++-..++.    ++|+|++...+     ....-++...++||+|+|.
T Consensus        30 g~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nv   89 (438)
T KOG0666|consen   30 GKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNV   89 (438)
T ss_pred             ceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcc
Confidence            678999999999997654332    78999996542     2344567788999999986

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=95.85  E-value=0.021  Score=46.07  Aligned_cols=31  Identities=16%  Similarity=0.116  Sum_probs=26.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      +.||.|+||.||+|....++..+++|.+...
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~   37 (267)
T cd06610           7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLE   37 (267)
T ss_pred             eeecCCCCeEEEEEEEcCCCcEEEEEEeccC
Confidence            6789999999999998777888999998643

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=95.85  E-value=0.021  Score=47.79  Aligned_cols=50  Identities=20%  Similarity=0.180  Sum_probs=34.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHH---HHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGL---FRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~---~~~Ir~~n  165 (187)
                      ..||+|+||.||++....++..+|+|.+.............+   .+.++|+|
T Consensus        28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~   80 (292)
T cd06658          28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHEN   80 (292)
T ss_pred             hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCc
Confidence            668999999999999877788999999865433333333333   34455544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=95.84  E-value=0.019  Score=47.68  Aligned_cols=51  Identities=22%  Similarity=0.333  Sum_probs=35.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-----hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-----KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-----~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|++.....     .....+....+.++|+|-
T Consensus        14 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i   69 (311)
T cd07866          14 GKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNV   69 (311)
T ss_pred             EEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCc
Confidence            779999999999999887788999998854321     122334445556666553

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=95.83  E-value=0.022  Score=45.69  Aligned_cols=32  Identities=31%  Similarity=0.411  Sum_probs=26.7

Q ss_pred             cEEcccCCceEEEEEEcCCC----eeeeeeeecccc
Q 047282          116 GKLGQGGFGGVDKGFLRETN----SFFSNWNVQLKH  147 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~----~~vavK~i~~~~  147 (187)
                      ..||.|+||.||++.....+    ..+|+|.+....
T Consensus         5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~   40 (258)
T smart00219        5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA   40 (258)
T ss_pred             ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC
Confidence            67999999999999987655    789999986543

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=95.82  E-value=0.023  Score=46.74  Aligned_cols=51  Identities=16%  Similarity=0.241  Sum_probs=35.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHH-hCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDI-RNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~I-r~~n~  166 (187)
                      ..||+|+||.||++....++..+|+|.+.....  .....+....+.+ +|+|.
T Consensus        24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i   77 (286)
T cd06638          24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNV   77 (286)
T ss_pred             eeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCe
Confidence            779999999999999987788999998754322  2223334445566 46654

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=95.82  E-value=0.026  Score=46.04  Aligned_cols=53  Identities=17%  Similarity=0.075  Sum_probs=32.9

Q ss_pred             cEEcccCCceEEEEEEcCC---Ceeeeeeeecccch-hhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRET---NSFFSNWNVQLKHG-KAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~---~~~vavK~i~~~~~-~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      +.||+|+||.||+|.....   ...+|+|.+..... .....+..++..++.-++++
T Consensus        10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~   66 (266)
T cd05033          10 KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPN   66 (266)
T ss_pred             eEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCC
Confidence            7899999999999998642   34789998864322 22223333444444434433

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=95.82  E-value=0.015  Score=49.30  Aligned_cols=31  Identities=26%  Similarity=0.383  Sum_probs=27.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ++||+|+||.||++....++..+|+|.+...
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~   31 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKD   31 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHH
Confidence            4689999999999999887889999998653

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=95.82  E-value=0.027  Score=45.91  Aligned_cols=53  Identities=15%  Similarity=0.068  Sum_probs=33.6

Q ss_pred             cEEcccCCceEEEEEEcCCCe---eeeeeeecccc-hhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNS---FFSNWNVQLKH-GKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~---~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      +.||+|+||.||+|..+.++.   .+|+|.+.... ......+..+++.+++-.++|
T Consensus        11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~   67 (268)
T cd05063          11 KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHN   67 (268)
T ss_pred             eEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCC
Confidence            789999999999999865333   68999886532 222233344444444444444

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=95.82  E-value=0.016  Score=46.73  Aligned_cols=56  Identities=18%  Similarity=0.052  Sum_probs=34.5

Q ss_pred             cEEcccCCceEEEEEEcCCC----------eeeeeeeecccchhhHHHHHHHHHHHhCCCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETN----------SFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPYGGEA  172 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~----------~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~~~~~  172 (187)
                      ..||+|+||.||+|.....+          ..+++|.+...... ...+..+++.++...|++....
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~   66 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKL   66 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhhe
Confidence            36899999999999997654          24778876543332 3334444444554444444433

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=95.82  E-value=0.012  Score=48.79  Aligned_cols=16  Identities=44%  Similarity=0.592  Sum_probs=14.2

Q ss_pred             EEcccCCceEEEEEEc
Q 047282          117 KLGQGGFGGVDKGFLR  132 (187)
Q Consensus       117 ~iG~G~fG~Vykg~l~  132 (187)
                      .||+|+||.||+|.+.
T Consensus         2 ~lG~G~~~~vy~g~~~   17 (274)
T cd05076           2 HLGQGTRTNIYDGRLR   17 (274)
T ss_pred             CcCcccccceecceeE
Confidence            5899999999999863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=95.81  E-value=0.02  Score=46.49  Aligned_cols=50  Identities=22%  Similarity=0.306  Sum_probs=34.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|.... +..+|+|.+.....  .....+...++.++|+|.
T Consensus        12 ~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i   63 (261)
T cd05068          12 RKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKL   63 (261)
T ss_pred             EEecccCCccEEEEEecC-CeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCc
Confidence            789999999999999765 56799999865332  222333344455666554

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=95.80  E-value=0.027  Score=46.51  Aligned_cols=30  Identities=23%  Similarity=0.361  Sum_probs=24.7

Q ss_pred             cEEcccCCceEEEEEEc-CCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLR-ETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~-~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++... .++..+|+|.+..
T Consensus         7 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~   37 (290)
T cd07862           7 AEIGEGAYGKVFKARDLKNGGRFVALKRVRV   37 (290)
T ss_pred             eEeccCCCeEEEEEEEcCCCCeEEEEEEEec
Confidence            67999999999999874 3467899998854

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=95.79  E-value=0.016  Score=50.67  Aligned_cols=30  Identities=20%  Similarity=0.239  Sum_probs=24.3

Q ss_pred             cEEcccCCceEEEEEE-----cCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFL-----RETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l-----~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|..     .+++..+|+|.+..
T Consensus        41 ~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~   75 (375)
T cd05104          41 KTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKP   75 (375)
T ss_pred             heecCCccceEEEEEEeccccCccceeEEEEeccC
Confidence            8899999999999964     23456799999854

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06901 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembrane proteins, lectin domain

Probab=95.78  E-value=0.051  Score=45.82  Aligned_cols=67  Identities=22%  Similarity=0.110  Sum_probs=44.7

Q ss_pred             CceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeeeeeccC
Q 047282           11 GRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSS   83 (187)
Q Consensus        11 G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~F~~~   83 (187)
                      +....++|.|..  ..|.|.+...+... -..++.  + -...||...|+||||+||...+.|+|++-.+..-
T Consensus       157 ~~~t~~rI~Y~~--~~l~v~vd~~~~~~-w~~Cf~--~-~~v~LP~~~yfGiSA~Tg~~sd~hdIlsv~~~~l  223 (248)
T cd06901         157 DHDTFVAIRYSK--GRLTVMTDIDGKNE-WKECFD--V-TGVRLPTGYYFGASAATGDLSDNHDIISMKLYEL  223 (248)
T ss_pred             CCCeEEEEEEEC--CeEEEEEecCCCCc-eeeeEE--e-CCeecCCCCEEEEEecCCCCCCcEEEEEEEEecC
Confidence            445689999996  45777776433111 011221  1 1334677799999999999999999999776643

The vesicular integral protein of 36 kDa (VIP36) is a type 1 transmembrane protein of the mammalian early secretory pathway that acts as a cargo receptor transporting high mannose type glycoproteins between the Golgi and the endoplasmic reticulum (ER). Lectins of the early secretory pathway are involved in the selective transport of newly synthesized glycoproteins from the ER to the ER-Golgi intermediate compartment (ERGIC). The most prominent cycling lectin is the mannose-binding type1 membrane protein ERGIC-53, which functions as a cargo receptor to facilitate export of glycoproteins from the ER. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded she

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=95.78  E-value=0.019  Score=46.80  Aligned_cols=50  Identities=20%  Similarity=0.295  Sum_probs=34.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHH---HHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVA---LCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~---~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++....++..+|+|.+.........   .+....+.++|+|
T Consensus        15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~   67 (267)
T cd06645          15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSN   67 (267)
T ss_pred             HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCC
Confidence            6789999999999998877889999988654332222   2333444555554

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=95.78  E-value=0.026  Score=47.24  Aligned_cols=50  Identities=24%  Similarity=0.282  Sum_probs=34.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHH---HHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALC---KGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~---~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..+++|.+...........   ....+.++|+|
T Consensus        26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~   78 (296)
T cd06654          26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN   78 (296)
T ss_pred             EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCC
Confidence            678999999999999877788999999865433322223   33344455554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=95.78  E-value=0.024  Score=46.62  Aligned_cols=53  Identities=21%  Similarity=0.338  Sum_probs=36.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc-hhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||.|+||.||+|....++..+|+|.+.... ......+..+++.+++-+|+|
T Consensus        10 ~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~   63 (277)
T cd06640          10 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY   63 (277)
T ss_pred             hhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCC
Confidence            57899999999999987778899999886432 223334444555555444443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=95.76  E-value=0.017  Score=53.42  Aligned_cols=31  Identities=19%  Similarity=0.353  Sum_probs=28.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      .+||+|+||.||.++-+++|..+|+|.+.++
T Consensus       147 k~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS  177 (550)
T KOG0605|consen  147 KVIGKGAFGEVRLARKKDTGEIYAMKILKKS  177 (550)
T ss_pred             eeeccccceeEEEEEEccCCcEEeeecccHH
Confidence            8899999999999999999999999999764

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=95.76  E-value=0.031  Score=44.25  Aligned_cols=53  Identities=21%  Similarity=0.254  Sum_probs=36.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|++|.||++....++..+++|++.............+++.++.-+++|
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~   58 (253)
T cd05122           6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPN   58 (253)
T ss_pred             eeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCC
Confidence            67899999999999998778889999986644323333444444444444444

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=95.76  E-value=0.022  Score=49.24  Aligned_cols=30  Identities=20%  Similarity=0.324  Sum_probs=27.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~   36 (360)
T cd05627           7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRK   36 (360)
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence            679999999999999988788999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=95.75  E-value=0.021  Score=47.57  Aligned_cols=51  Identities=16%  Similarity=0.270  Sum_probs=35.5

Q ss_pred             cEEcccCCceEEEEEEcC--CCeeeeeeeecccc---h---hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE--TNSFFSNWNVQLKH---G---KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~--~~~~vavK~i~~~~---~---~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....  .+..+|+|.+....   .   .....+......++|+|.
T Consensus         6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i   64 (316)
T cd07842           6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENV   64 (316)
T ss_pred             EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCc
Confidence            579999999999999876  67899999986522   1   122233344556666653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=95.75  E-value=0.023  Score=48.04  Aligned_cols=30  Identities=23%  Similarity=0.324  Sum_probs=26.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|+...++..+++|.+..
T Consensus        27 ~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~   56 (313)
T cd06633          27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSY   56 (313)
T ss_pred             eeeccCCCeEEEEEEECCCCcEEEEEEEec
Confidence            679999999999999887788999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=95.75  E-value=0.029  Score=45.72  Aligned_cols=29  Identities=34%  Similarity=0.375  Sum_probs=26.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeec
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQ  144 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~  144 (187)
                      +.||+|+||.||+|...+++..+|+|.+.
T Consensus         8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~   36 (265)
T cd06652           8 KLLGQGAFGRVYLCYDADTGRELAVKQVQ   36 (265)
T ss_pred             eEEecCCceEEEEEEEcCCCcEEEEEEee
Confidence            78999999999999998888899999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=95.74  E-value=0.03  Score=45.02  Aligned_cols=53  Identities=19%  Similarity=0.273  Sum_probs=35.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      +.||+|+||.||++....++..+++|.+....  .........+++.+++-.|+|
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~   60 (256)
T cd08529           6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY   60 (256)
T ss_pred             EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCC
Confidence            67899999999999998878899999885421  222233333444444444443

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=95.74  E-value=0.026  Score=46.35  Aligned_cols=52  Identities=19%  Similarity=0.306  Sum_probs=34.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc-hhhHHHHHHHHHHHhCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTGP  167 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~  167 (187)
                      ..||+|+||.||+|....++..+|+|.+.... .........+++.+++..|+
T Consensus        10 ~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~   62 (277)
T cd06642          10 ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP   62 (277)
T ss_pred             HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCC
Confidence            56899999999999988778889999876432 22222333444444444443

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=95.74  E-value=0.022  Score=46.36  Aligned_cols=30  Identities=23%  Similarity=0.230  Sum_probs=26.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~   36 (280)
T cd05581           7 KIIGEGSFSTVVLAKEKETNKEYAIKILDK   36 (280)
T ss_pred             eeecCCCceEEEEEEEcCCCCEEEEEEech
Confidence            678999999999999987789999998854

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=95.73  E-value=0.027  Score=47.20  Aligned_cols=50  Identities=22%  Similarity=0.284  Sum_probs=34.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHH---HHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCK---GLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~---~~~~~Ir~~n  165 (187)
                      ..||.|+||.||+|....++..+++|.+............   ...+.++|+|
T Consensus        25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~   77 (296)
T cd06655          25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPN   77 (296)
T ss_pred             EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCc
Confidence            6789999999999998777889999998654333222333   3344455554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=95.73  E-value=0.019  Score=47.62  Aligned_cols=51  Identities=12%  Similarity=0.229  Sum_probs=36.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh-----hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK-----AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~-----~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|..+.++..+++|.+......     ....+....+.++|+|.
T Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni   66 (293)
T cd07843          11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNI   66 (293)
T ss_pred             hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCE
Confidence            6789999999999999877889999998643221     11234445566777663

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=95.73  E-value=0.024  Score=46.19  Aligned_cols=30  Identities=30%  Similarity=0.509  Sum_probs=24.4

Q ss_pred             cEEcccCCceEEEEEEcCCCe--eeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNS--FFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~--~vavK~i~~  145 (187)
                      ..||+|+||.||+|.....+.  .+|+|.+..
T Consensus         5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~   36 (272)
T cd05075           5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKI   36 (272)
T ss_pred             cccCcccCceEEEeEEccCCCeeeEEEEeccc
Confidence            679999999999999876443  589998754

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=95.73  E-value=0.022  Score=46.85  Aligned_cols=50  Identities=24%  Similarity=0.353  Sum_probs=35.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-----hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-----KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-----~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++....++..+|+|.+.....     .....+....+.++|+|
T Consensus         6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~   60 (284)
T cd07839           6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN   60 (284)
T ss_pred             EEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCC
Confidence            578999999999999988788999999854221     12223444555677765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=95.73  E-value=0.021  Score=46.55  Aligned_cols=31  Identities=23%  Similarity=0.338  Sum_probs=27.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      +.||+|+||.||+|.....+..+|+|.+..+
T Consensus        12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~   42 (263)
T cd05052          12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED   42 (263)
T ss_pred             eecCCcccceEEEEEEecCCceEEEEEecCC
Confidence            7799999999999998877888999988643

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=95.71  E-value=0.023  Score=53.22  Aligned_cols=47  Identities=19%  Similarity=0.245  Sum_probs=35.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh--hHHHHHHHHHHHh
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK--AVALCKGLFRDIR  162 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~--~~~~~~~~~~~Ir  162 (187)
                      ..||+|.||+|.||....++..||||.+..+...  +...+...+..|+
T Consensus       192 e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln  240 (586)
T KOG0667|consen  192 EVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLN  240 (586)
T ss_pred             EEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHh
Confidence            8899999999999999998999999999664432  3334444555555

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=95.69  E-value=0.024  Score=45.86  Aligned_cols=51  Identities=20%  Similarity=0.184  Sum_probs=35.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPTGP  167 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n~~  167 (187)
                      ..||+|+||.||++...+ +..+|+|.+.....  .....+....+.++|+|-.
T Consensus        12 ~~ig~g~~~~v~~~~~~~-~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~   64 (261)
T cd05034          12 RKLGAGQFGEVWMGTWNG-TTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLV   64 (261)
T ss_pred             eeeccCcceEEEEEEEcC-CceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEe
Confidence            789999999999999865 57799998865332  2333444455566665543

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=95.69  E-value=0.021  Score=48.52  Aligned_cols=30  Identities=27%  Similarity=0.346  Sum_probs=24.6

Q ss_pred             cEEcccCCceEEEEEEc---CCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLR---ETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~---~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++...   ..+..+|+|.+..
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~   34 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKK   34 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEH
Confidence            57999999999999863   3467899999864

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=95.68  E-value=0.026  Score=47.93  Aligned_cols=30  Identities=23%  Similarity=0.360  Sum_probs=27.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~   34 (324)
T cd05589           5 AVLGRGHFGKVLLAEYKKTGELYAIKALKK   34 (324)
T ss_pred             EEEeecCCEEEEEEEECCCCCEEEEEEEEH
Confidence            679999999999999887788999999864

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=95.68  E-value=0.019  Score=50.11  Aligned_cols=50  Identities=20%  Similarity=0.351  Sum_probs=35.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh---hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK---AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~---~~~~~~~~~~~Ir~~n  165 (187)
                      +.||+|.||+||.+....++...|||.+...+..   ....+...+.+++|+|
T Consensus        23 ~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~   75 (313)
T KOG0198|consen   23 KLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPN   75 (313)
T ss_pred             ccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCC
Confidence            8899999999999999877888999998664322   2233444455565544

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=95.67  E-value=0.014  Score=49.59  Aligned_cols=30  Identities=20%  Similarity=0.180  Sum_probs=24.0

Q ss_pred             cEEcccCCceEEEEEEc-----CCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLR-----ETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~-----~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|...     ..+..+|+|.+..
T Consensus        13 ~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~   47 (338)
T cd05102          13 KVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKE   47 (338)
T ss_pred             eEeccCCcceEEEEEEeccCCcccchhhheecccc
Confidence            78999999999999742     2345799999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=95.67  E-value=0.027  Score=46.28  Aligned_cols=50  Identities=20%  Similarity=0.324  Sum_probs=34.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hh---hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GK---AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~---~~~~~~~~~~~Ir~~n  165 (187)
                      ..||.|++|.||+|....++..+|+|++....  ..   ....+....+.++|+|
T Consensus         5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   59 (283)
T cd07835           5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPN   59 (283)
T ss_pred             eEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCC
Confidence            57899999999999988778999999886432  11   1222334445555555

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=95.67  E-value=0.024  Score=47.72  Aligned_cols=50  Identities=20%  Similarity=0.272  Sum_probs=34.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-h---hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-K---AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-~---~~~~~~~~~~~Ir~~n  165 (187)
                      +.||+|+||.||++....++..+|+|.+..... .   ....+....+.++|+|
T Consensus         7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~   60 (308)
T cd06615           7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPY   60 (308)
T ss_pred             eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCC
Confidence            678999999999999887788889998754321 1   1223333444566554

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG3838 consensus Mannose lectin ERGIC-53, involved in glycoprotein traffic [Intracellular trafficking, secretion, and vesicular transport]

Probab=95.66  E-value=0.053  Score=48.53  Aligned_cols=69  Identities=23%  Similarity=0.154  Sum_probs=48.6

Q ss_pred             eEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeee-eeccCCC
Q 047282           13 RNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLW-EFNSSLE   85 (187)
Q Consensus        13 ~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW-~F~~~~~   85 (187)
                      ++.|.|+|-.  ++|+|.+...-.+. ..+-+...++ .-+||..=|+|.||+||...+.|+|++. .|+..-+
T Consensus       189 PvRarItY~~--nvLtv~innGmtp~-d~yE~C~rve-~~~lp~nGyFGvSAATGgLADDHDVl~FltfsL~e~  258 (497)
T KOG3838|consen  189 PVRARITYYG--NVLTVMINNGMTPS-DDYEFCVRVE-NLLLPPNGYFGVSAATGGLADDHDVLSFLTFSLSEP  258 (497)
T ss_pred             CceEEEEEec--cEEEEEEcCCCCCC-CCcceeEecc-ceeccCCCeeeeeecccccccccceeeeEEeeecCC
Confidence            4689999986  88999886433221 2233444333 3356788999999999999999999997 4555543

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=95.66  E-value=0.022  Score=48.91  Aligned_cols=50  Identities=16%  Similarity=0.209  Sum_probs=34.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--h---hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--G---KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~---~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++....++..+|+|++....  .   .....+....+.++|+|
T Consensus        21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   75 (343)
T cd07880          21 KQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHEN   75 (343)
T ss_pred             EEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCC
Confidence            78999999999999988778899999885421  1   11223334455566665

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=95.66  E-value=0.024  Score=48.60  Aligned_cols=30  Identities=17%  Similarity=0.273  Sum_probs=26.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|++..
T Consensus        21 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~   50 (342)
T cd07879          21 KQVGSGAYGSVCSAIDKRTGEKVAIKKLSR   50 (342)
T ss_pred             EEeeecCCeEEEEEEeCCCCcEEEEEEecC
Confidence            789999999999999877788999998854

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=95.65  E-value=0.02  Score=46.39  Aligned_cols=49  Identities=18%  Similarity=0.179  Sum_probs=34.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHH---HHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGL---FRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~---~~~Ir~~n  165 (187)
                      ..||.|+||.||+|...+ +..+++|.+.............+   .+.++|+|
T Consensus        12 ~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~   63 (261)
T cd05148          12 RKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKH   63 (261)
T ss_pred             hhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcc
Confidence            678999999999999987 78899999865443222233333   34455544

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=95.65  E-value=0.023  Score=48.10  Aligned_cols=30  Identities=23%  Similarity=0.254  Sum_probs=24.6

Q ss_pred             cEEcccCCceEEEEEE---cCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFL---RETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l---~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++..   ..++..+|+|.+..
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~   34 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKK   34 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEH
Confidence            4799999999998875   34578899999865

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=95.65  E-value=0.031  Score=45.81  Aligned_cols=31  Identities=35%  Similarity=0.425  Sum_probs=27.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....++..+|+|.+...
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~   36 (286)
T cd07832           6 GRIGEGAHGIVFKAKDRETGETVALKKVALR   36 (286)
T ss_pred             eecccCCCcEEEEEEECCCCceEEEEEEEcc
Confidence            6789999999999998877889999998653

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=95.64  E-value=0.026  Score=45.43  Aligned_cols=51  Identities=22%  Similarity=0.227  Sum_probs=34.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh-hHHHHHHHHHHHhCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK-AVALCKGLFRDIRNPTGP  167 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~-~~~~~~~~~~~Ir~~n~~  167 (187)
                      .+||+|+||.||++.... +..+|+|.+...... ....+..+++.+++-.++
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~   52 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHP   52 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCC
Confidence            368999999999999887 888999988653322 222334444444444444

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=95.63  E-value=0.018  Score=48.90  Aligned_cols=30  Identities=27%  Similarity=0.420  Sum_probs=26.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||++....++..+|+|.+..
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~   30 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKK   30 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEH
Confidence            368999999999999988888999999865

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.63  E-value=0.012  Score=53.20  Aligned_cols=31  Identities=26%  Similarity=0.382  Sum_probs=28.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|.||.||||....++..||+|.+...
T Consensus        19 ~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le   49 (467)
T KOG0201|consen   19 ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLE   49 (467)
T ss_pred             hhccccccceeeeeeeccccceEEEEEechh
Confidence            7799999999999999888899999999754

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=95.62  E-value=0.029  Score=46.07  Aligned_cols=53  Identities=25%  Similarity=0.295  Sum_probs=35.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||.|+||.||++....++..+|+|.+..........+..+++.+++-+|++
T Consensus        11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~   63 (280)
T cd06611          11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPN   63 (280)
T ss_pred             HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCc
Confidence            56899999999999987778899999986544333333333444344333433

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=95.62  E-value=0.034  Score=46.47  Aligned_cols=50  Identities=18%  Similarity=0.237  Sum_probs=31.9

Q ss_pred             cEEcccCCceEEEEEEcC----------------CCeeeeeeeecccch-hhHH---HHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE----------------TNSFFSNWNVQLKHG-KAVA---LCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~----------------~~~~vavK~i~~~~~-~~~~---~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++...+                .+..+|+|.+..... ....   .+...+..++|+|
T Consensus        11 ~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~n   80 (304)
T cd05096          11 EKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPN   80 (304)
T ss_pred             eEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCC
Confidence            789999999999997532                234699998865322 2222   2333444566665

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PHA03209 serine/threonine kinase US3; Provisional

Probab=95.62  E-value=0.019  Score=49.76  Aligned_cols=48  Identities=15%  Similarity=-0.008  Sum_probs=34.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|......   ...+....+.++|+|-
T Consensus        72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~---~~~E~~~l~~l~h~~i  119 (357)
T PHA03209         72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT---TLIEAMLLQNVNHPSV  119 (357)
T ss_pred             EEecCCCCeEEEEEEECCCCceEEEEeCCccc---cHHHHHHHHhCCCCCC
Confidence            78999999999999998777889999754322   2234445566776654

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=95.61  E-value=0.02  Score=47.21  Aligned_cols=50  Identities=18%  Similarity=0.332  Sum_probs=32.3

Q ss_pred             cEEcccCCceEEEEEEc----CCCeeeeeeeecccc-hh---hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLR----ETNSFFSNWNVQLKH-GK---AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~----~~~~~vavK~i~~~~-~~---~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|...    ..+..+++|.+.... ..   ....+....+.++|+|
T Consensus        11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~n   68 (283)
T cd05090          11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPN   68 (283)
T ss_pred             eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCC
Confidence            67999999999999852    234678999886422 11   2223334555666655

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=95.59  E-value=0.024  Score=46.33  Aligned_cols=49  Identities=22%  Similarity=0.222  Sum_probs=32.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|...+ ...+|+|.+.....  .....+....+.++|+|
T Consensus        12 ~~lg~g~~~~v~~~~~~~-~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~   62 (262)
T cd05071          12 VKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEK   62 (262)
T ss_pred             eecCCCCCCcEEEEEecC-CceEEEEecccCccCHHHHHHHHHHHHhCCCCC
Confidence            678999999999998876 45699999865322  22223333444555554

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=95.58  E-value=0.027  Score=45.73  Aligned_cols=49  Identities=20%  Similarity=0.244  Sum_probs=33.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++...+ +..+|+|.+.....  .....+....+.++|++
T Consensus        12 ~~ig~g~~~~v~~~~~~~-~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~   62 (260)
T cd05070          12 KKLGNGQFGEVWMGTWNG-NTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDK   62 (260)
T ss_pred             heeccccCceEEEEEecC-CceeEEEEecCCCCCHHHHHHHHHHHHhcCCCc
Confidence            789999999999998875 66799998865322  22233344555566654

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=95.58  E-value=0.031  Score=45.26  Aligned_cols=30  Identities=23%  Similarity=0.330  Sum_probs=23.6

Q ss_pred             cEEcccCCceEEEEEEcC---CCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRE---TNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~---~~~~vavK~i~~  145 (187)
                      +.||+|+||.||+|...+   ....+|+|++..
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~   33 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNR   33 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCc
Confidence            468999999999998643   235789998854

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=95.57  E-value=0.024  Score=46.72  Aligned_cols=28  Identities=29%  Similarity=0.533  Sum_probs=24.7

Q ss_pred             EcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          118 LGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       118 iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ||+|+||.||++....++..+|+|.+..
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~   28 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDK   28 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEeh
Confidence            6899999999999887788999998854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=95.57  E-value=0.029  Score=46.24  Aligned_cols=30  Identities=30%  Similarity=0.484  Sum_probs=26.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~   36 (286)
T cd06622           7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRL   36 (286)
T ss_pred             hhhcccCCeEEEEEEEcCCCcEEEEEEeec
Confidence            578999999999999987788999998854

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=95.56  E-value=0.027  Score=46.69  Aligned_cols=30  Identities=33%  Similarity=0.408  Sum_probs=26.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus         8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~   37 (294)
T PLN00009          8 EKIGEGTYGVVYKARDRVTNETIALKKIRL   37 (294)
T ss_pred             EEecCCCCEEEEEEEecCCCcEEEEEehhh
Confidence            678999999999999887788999998854

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=95.56  E-value=0.02  Score=48.68  Aligned_cols=28  Identities=21%  Similarity=0.355  Sum_probs=25.4

Q ss_pred             EcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          118 LGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       118 iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ||+|+||.||+|....++..+|+|.+..
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~   28 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSK   28 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeH
Confidence            6999999999999888789999999864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=95.56  E-value=0.037  Score=45.15  Aligned_cols=30  Identities=33%  Similarity=0.390  Sum_probs=26.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+++|.+..
T Consensus         8 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~   37 (266)
T cd06651           8 KLLGQGAFGRVYLCYDVDTGRELAAKQVQF   37 (266)
T ss_pred             ceecCCCCEEEEEEEEcCCCcEEEEEEeec
Confidence            689999999999999887788999998753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=95.54  E-value=0.037  Score=44.74  Aligned_cols=30  Identities=27%  Similarity=0.293  Sum_probs=26.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus         8 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~   37 (267)
T cd08224           8 KKIGKGQFSVVYKAICLLDGRVVALKKVQI   37 (267)
T ss_pred             eeeccCCceEEEEEEEcCCCCEEEEEEeec
Confidence            678999999999999987788999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=95.54  E-value=0.021  Score=50.90  Aligned_cols=31  Identities=19%  Similarity=0.218  Sum_probs=25.3

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|...+     .+..+|+|++...
T Consensus        43 ~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~   78 (401)
T cd05107          43 RTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKST   78 (401)
T ss_pred             hhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCC
Confidence            889999999999998642     3457999999653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=95.54  E-value=0.028  Score=46.43  Aligned_cols=30  Identities=27%  Similarity=0.405  Sum_probs=26.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||+|....++..+|+|.+..
T Consensus         7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~   36 (295)
T cd07837           7 EKIGEGTYGKVYKARDKNTGKLVALKKTRL   36 (295)
T ss_pred             eEecccCCeEEEEEEECCCCcEEEEEeehh
Confidence            678999999999999987789999998754

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=95.53  E-value=0.035  Score=45.27  Aligned_cols=30  Identities=23%  Similarity=0.327  Sum_probs=24.7

Q ss_pred             cEEcccCCceEEEEEEcC---CCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRE---TNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~---~~~~vavK~i~~  145 (187)
                      +.||+|+||.||+|.+..   ++..+|+|.+..
T Consensus         5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~   37 (273)
T cd05074           5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKA   37 (273)
T ss_pred             hcccCCCCCCEEeeEeeccCCCceEEEEEEecc
Confidence            578999999999998753   357899998854

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=95.53  E-value=0.026  Score=46.42  Aligned_cols=30  Identities=27%  Similarity=0.284  Sum_probs=23.9

Q ss_pred             cEEcccCCceEEEEEEcCCCe----eeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNS----FFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~----~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++.    .+|+|.+..
T Consensus        13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~   46 (279)
T cd05109          13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRE   46 (279)
T ss_pred             eecCCCCCceEEEEEEecCCCccceEEEEEEecC
Confidence            789999999999998654454    378998854

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=95.52  E-value=0.038  Score=43.85  Aligned_cols=30  Identities=10%  Similarity=-0.039  Sum_probs=26.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|... +|..+|||.+...
T Consensus         3 ~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~   32 (190)
T cd05145           3 GCISTGKEANVYHARTG-DGEELAVKIYKTS   32 (190)
T ss_pred             ceeecCCCcEEEEEEcC-CCCEEEEEEEEcC
Confidence            57999999999999987 5899999998653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=95.51  E-value=0.032  Score=45.37  Aligned_cols=29  Identities=28%  Similarity=0.478  Sum_probs=24.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|... ++..+|+|.+..
T Consensus         6 ~~ig~g~~~~v~~~~~~-~~~~~avk~~~~   34 (265)
T cd06631           6 EVLGKGAYGTVYCGLTN-QGQLIAVKQVEL   34 (265)
T ss_pred             ceEeccCCeEEEEEEEc-CCCeEEEEEeec
Confidence            67999999999999875 478899998854

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.51  E-value=0.02  Score=54.10  Aligned_cols=51  Identities=16%  Similarity=0.252  Sum_probs=37.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh------hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK------AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~------~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||-|+||.||-+....+...||||+++-.-.+      ....+..+++.|+|||.
T Consensus        32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPnt   88 (948)
T KOG0577|consen   32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNT   88 (948)
T ss_pred             HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCc
Confidence            7799999999999998877789999999643222      22344556667777764

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=95.49  E-value=0.043  Score=44.11  Aligned_cols=30  Identities=17%  Similarity=0.231  Sum_probs=26.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~   35 (256)
T cd08220           6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPV   35 (256)
T ss_pred             EEecccCceEEEEEEEcCCCcEEEEEEEec
Confidence            679999999999999887788999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=95.49  E-value=0.016  Score=54.06  Aligned_cols=30  Identities=30%  Similarity=0.335  Sum_probs=27.1

Q ss_pred             cEEcccCCceEEEEEEcCC----Ceeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRET----NSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~----~~~vavK~i~~  145 (187)
                      +.||+|+||.||+|....+    +..+|+|++..
T Consensus       138 ~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~  171 (566)
T PLN03225        138 KKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATE  171 (566)
T ss_pred             EEEeeCCCeEEEEEEEcCCccccCcEEEEEEecc
Confidence            8899999999999999877    78899999864

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=95.48  E-value=0.027  Score=48.02  Aligned_cols=31  Identities=16%  Similarity=0.266  Sum_probs=27.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ++||+|+||.||++....++..+|+|.+...
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~   31 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKE   31 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHH
Confidence            4699999999999999887889999999653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=95.47  E-value=0.021  Score=47.02  Aligned_cols=32  Identities=31%  Similarity=0.341  Sum_probs=25.3

Q ss_pred             cEEcccCCceEEEEEEcCC-----Ceeeeeeeecccc
Q 047282          116 GKLGQGGFGGVDKGFLRET-----NSFFSNWNVQLKH  147 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~-----~~~vavK~i~~~~  147 (187)
                      ..||+|+||.||+|....+     +..+|+|.+....
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~   47 (283)
T cd05091          11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA   47 (283)
T ss_pred             HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC
Confidence            5789999999999987532     4679999987543

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=95.46  E-value=0.034  Score=48.57  Aligned_cols=30  Identities=20%  Similarity=0.281  Sum_probs=27.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus        49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~   78 (371)
T cd05622          49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSK   78 (371)
T ss_pred             EEEeecCCeEEEEEEECCCCcEEEEEEEEH
Confidence            789999999999999988888999999854

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=95.46  E-value=0.041  Score=45.69  Aligned_cols=31  Identities=23%  Similarity=0.204  Sum_probs=27.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      +.||+|++|.||++....++..+++|++...
T Consensus        25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~   55 (285)
T cd06648          25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLR   55 (285)
T ss_pred             eEeccCCCeEEEEEEECCCCCEEEEEEEecc
Confidence            7899999999999998777889999988543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=95.46  E-value=0.041  Score=44.85  Aligned_cols=29  Identities=28%  Similarity=0.330  Sum_probs=26.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeec
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQ  144 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~  144 (187)
                      +.||+|+||.||+|....++..+|+|.+.
T Consensus         8 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~   36 (264)
T cd06653           8 KLLGRGAFGEVYLCYDADTGRELAVKQVP   36 (264)
T ss_pred             eeEccCCCeEEEEEEEcCCCCEEEEEEEe
Confidence            78999999999999988778899999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=95.45  E-value=0.029  Score=46.02  Aligned_cols=52  Identities=13%  Similarity=0.009  Sum_probs=31.4

Q ss_pred             EEcccCCceEEEEEEcCC------------CeeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          117 KLGQGGFGGVDKGFLRET------------NSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       117 ~iG~G~fG~Vykg~l~~~------------~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      .||+|+||.||+|.....            ...+++|.+..........+.++...++..+|++
T Consensus         2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~   65 (262)
T cd05077           2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKH   65 (262)
T ss_pred             ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCC
Confidence            689999999999986421            2247888876544433333444444444444443

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=95.45  E-value=0.042  Score=46.04  Aligned_cols=30  Identities=23%  Similarity=0.279  Sum_probs=26.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||+|....++..+|+|.+..
T Consensus        21 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~   50 (307)
T cd06607          21 REIGHGSFGAVYFARDVRTNEVVAIKKMSY   50 (307)
T ss_pred             eeecCCCCeEEEEEEEcCCCcEEEEEEEec
Confidence            779999999999999887788999998854

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=95.44  E-value=0.035  Score=44.39  Aligned_cols=32  Identities=31%  Similarity=0.436  Sum_probs=26.5

Q ss_pred             cEEcccCCceEEEEEEcCC---Ceeeeeeeecccc
Q 047282          116 GKLGQGGFGGVDKGFLRET---NSFFSNWNVQLKH  147 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~---~~~vavK~i~~~~  147 (187)
                      +.||+|+||.||++.....   +..+++|.+....
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~   35 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDA   35 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeecccc
Confidence            3689999999999998754   6789999986543

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=95.43  E-value=0.03  Score=45.72  Aligned_cols=50  Identities=22%  Similarity=0.332  Sum_probs=32.1

Q ss_pred             EEcccCCceEEEEEEc--CCCeeeeeeeecccchhh----HHHHHHHHHHHhCCCC
Q 047282          117 KLGQGGFGGVDKGFLR--ETNSFFSNWNVQLKHGKA----VALCKGLFRDIRNPTG  166 (187)
Q Consensus       117 ~iG~G~fG~Vykg~l~--~~~~~vavK~i~~~~~~~----~~~~~~~~~~Ir~~n~  166 (187)
                      .||+|+||.||+|...  +.+..+|+|.+.......    ...+....+.++|+|-
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   57 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYI   57 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCe
Confidence            4899999999999764  334568999886543221    2233344555666553

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=95.41  E-value=0.038  Score=47.35  Aligned_cols=31  Identities=23%  Similarity=0.219  Sum_probs=26.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++....++..+|+|.+...
T Consensus        11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~   41 (333)
T cd06650          11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLE   41 (333)
T ss_pred             ccccCCCCEEEEEEEECCCCcEEEEEEeecc
Confidence            6789999999999999877888999987653

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=95.41  E-value=0.035  Score=45.02  Aligned_cols=32  Identities=28%  Similarity=0.419  Sum_probs=24.8

Q ss_pred             cEEcccCCceEEEEEEcCCC---eeeeeeeecccc
Q 047282          116 GKLGQGGFGGVDKGFLRETN---SFFSNWNVQLKH  147 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~---~~vavK~i~~~~  147 (187)
                      +.||+|+||.||+|+....+   ..+|+|.+....
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~   35 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEH   35 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEeccccc
Confidence            36899999999999865433   579999986543

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=95.40  E-value=0.03  Score=45.43  Aligned_cols=28  Identities=36%  Similarity=0.490  Sum_probs=24.9

Q ss_pred             EcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          118 LGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       118 iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ||.|+||.||++....++..+++|.+..
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~   28 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKK   28 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEeh
Confidence            6899999999999987788999999864

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=95.40  E-value=0.027  Score=46.13  Aligned_cols=50  Identities=16%  Similarity=0.227  Sum_probs=32.5

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeecccchh----hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQLKHGK----AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~~~~~----~~~~~~~~~~~Ir~~n  165 (187)
                      +.||+|+||.||+|...+     .+..+|+|.+......    ....+.+.++.++|+|
T Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~   69 (280)
T cd05049          11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHEN   69 (280)
T ss_pred             hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCC
Confidence            679999999999998743     2467999998654332    2222333444555554

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=95.40  E-value=0.035  Score=45.46  Aligned_cols=30  Identities=30%  Similarity=0.312  Sum_probs=26.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|++..
T Consensus         7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~   36 (286)
T cd07847           7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVE   36 (286)
T ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEEee
Confidence            578999999999999987788999998854

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=95.40  E-value=0.046  Score=44.09  Aligned_cols=53  Identities=17%  Similarity=0.188  Sum_probs=35.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      +.||+|+||.+|++....++..+|+|.+....  .........+++.++.-++++
T Consensus         6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~   60 (256)
T cd08218           6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPN   60 (256)
T ss_pred             EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCC
Confidence            67999999999999988778899999986432  222223334444444444443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=95.39  E-value=0.036  Score=45.35  Aligned_cols=31  Identities=29%  Similarity=0.431  Sum_probs=27.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||.|+||.||+|....++..+|+|.+...
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~   37 (274)
T cd06609           7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLE   37 (274)
T ss_pred             hhhcCCCCeEEEEEEECCCCeEEEEEEeecc
Confidence            5689999999999999877889999988653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=95.38  E-value=0.032  Score=45.38  Aligned_cols=30  Identities=23%  Similarity=0.253  Sum_probs=24.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      +.||+|+||.||++...+ +..+++|.+...
T Consensus        12 ~~lg~g~~~~vy~~~~~~-~~~~~iK~~~~~   41 (260)
T cd05073          12 KKLGAGQFGEVWMATYNK-HTKVAVKTMKPG   41 (260)
T ss_pred             eEecCccceEEEEEEecC-CccEEEEecCCC
Confidence            789999999999998765 567999987643

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=95.38  E-value=0.044  Score=46.29  Aligned_cols=30  Identities=23%  Similarity=0.279  Sum_probs=26.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||++....++..+|+|.+..
T Consensus        31 ~~lg~G~~~~v~~~~~~~~~~~valK~~~~   60 (317)
T cd06635          31 REIGHGSFGAVYFARDVRTNEVVAIKKMSY   60 (317)
T ss_pred             heeccCCCeEEEEEEEcCCCcEEEEEEEec
Confidence            789999999999999887788999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=95.37  E-value=0.035  Score=44.81  Aligned_cols=54  Identities=15%  Similarity=0.010  Sum_probs=34.5

Q ss_pred             cEEcccCCceEEEEEEcC-CC--eeeeeeeecccch-hhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE-TN--SFFSNWNVQLKHG-KAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-~~--~~vavK~i~~~~~-~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      .+||+|++|.||+|.... .+  ..+|+|.+..... .....+..+++.+++-++++.
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i   58 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENL   58 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCc
Confidence            368999999999998754 22  3689999876444 333444445555544444443

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=95.36  E-value=0.034  Score=46.12  Aligned_cols=30  Identities=20%  Similarity=0.278  Sum_probs=26.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~   36 (290)
T cd05580           7 KTLGTGSFGRVMLVRHKGSGKYYALKILSK   36 (290)
T ss_pred             EEeecCCCeEEEEEEEcCCCCEEEEEEEEH
Confidence            678999999999999987788999998854

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=95.36  E-value=0.035  Score=47.25  Aligned_cols=52  Identities=12%  Similarity=0.121  Sum_probs=37.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-----hhHHHHHHHHHHHhCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-----KAVALCKGLFRDIRNPTGP  167 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-----~~~~~~~~~~~~Ir~~n~~  167 (187)
                      ..||+|+||.||++....++..+|+|++.....     .....+....+.++|+|..
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv   67 (334)
T cd07855          11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNII   67 (334)
T ss_pred             eeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCcc
Confidence            678999999999999888789999999865321     1222334455667777653

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=95.36  E-value=0.037  Score=45.90  Aligned_cols=29  Identities=24%  Similarity=0.381  Sum_probs=25.6

Q ss_pred             EEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          117 KLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       117 ~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      .||+|+||.||++....++..+|+|.+..
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~   29 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDK   29 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEc
Confidence            47999999999999887788999998854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=95.36  E-value=0.038  Score=44.36  Aligned_cols=29  Identities=14%  Similarity=0.249  Sum_probs=25.3

Q ss_pred             EcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          118 LGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       118 iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ||.|+||.||++....++..+++|.+...
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~   29 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKA   29 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecch
Confidence            68999999999999877889999988643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=95.33  E-value=0.036  Score=45.78  Aligned_cols=30  Identities=27%  Similarity=0.285  Sum_probs=26.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus        11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~   40 (284)
T cd06620          11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHI   40 (284)
T ss_pred             HHcCCCCCeEEEEEEEcCCCcEEEEEEEEe
Confidence            678999999999999887788899998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=95.33  E-value=0.036  Score=45.26  Aligned_cols=29  Identities=21%  Similarity=0.319  Sum_probs=25.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeec
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQ  144 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~  144 (187)
                      +.||+|+||.||+|....++..+|+|.+.
T Consensus         7 ~~lg~g~~~~vy~~~~~~~~~~~a~K~~~   35 (272)
T cd06629           7 ELIGKGTYGRVYLALNVTTGEMMAVKQVE   35 (272)
T ss_pred             ceecccCceEEEEEeecCCCceeeeeeee
Confidence            67999999999999987778899999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>PHA03211 serine/threonine kinase US3; Provisional

Probab=95.33  E-value=0.029  Score=51.07  Aligned_cols=48  Identities=15%  Similarity=0.006  Sum_probs=35.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++..+..+..||+|.....   ....+...++.|+|+|.
T Consensus       175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~---~~~~E~~iL~~L~HpnI  222 (461)
T PHA03211        175 RALTPGSEGCVFESSHPDYPQRVVVKAGWYA---SSVHEARLLRRLSHPAV  222 (461)
T ss_pred             EEEccCCCeEEEEEEECCCCCEEEEeccccc---CHHHHHHHHHHCCCCCC
Confidence            7899999999999999887889999975332   12234445566766664

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=95.32  E-value=0.034  Score=45.13  Aligned_cols=30  Identities=23%  Similarity=0.227  Sum_probs=26.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+++|.+..
T Consensus         8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~   37 (267)
T cd08229           8 KKIGRGQFSEVYRATCLLDGVPVALKKVQI   37 (267)
T ss_pred             hhhcccCCeEEEEEeecCCCceEEEEeeee
Confidence            678999999999999876788999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=95.31  E-value=0.034  Score=47.75  Aligned_cols=30  Identities=23%  Similarity=0.198  Sum_probs=24.4

Q ss_pred             cEEcccCCceEEEEEE-----cCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFL-----RETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l-----~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|..     ..++..+|+|.+..
T Consensus        13 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~   47 (343)
T cd05103          13 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE   47 (343)
T ss_pred             ccccCCccceEEEEeeccCCccccceeEEEEEecc
Confidence            7899999999999973     23467899999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=95.28  E-value=0.043  Score=44.56  Aligned_cols=30  Identities=27%  Similarity=0.481  Sum_probs=26.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus         6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~   35 (267)
T cd06628           6 ALIGSGSFGSVYLGMNASSGELMAVKQVEL   35 (267)
T ss_pred             ceeecCCCeEEEEEEecCCCcEEEEEEecC
Confidence            678999999999999877788899998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=95.28  E-value=0.056  Score=43.69  Aligned_cols=53  Identities=23%  Similarity=0.200  Sum_probs=35.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-----hhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-----KAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-----~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      +.||+|+||.||++....++..+|+|.+.....     ........+++.+++-++++
T Consensus         8 ~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~   65 (263)
T cd06625           8 KLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHER   65 (263)
T ss_pred             ceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCC
Confidence            789999999999999887788999998754211     12223344444455555544

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=95.28  E-value=0.03  Score=45.44  Aligned_cols=29  Identities=28%  Similarity=0.507  Sum_probs=23.4

Q ss_pred             EEcccCCceEEEEEEc--CCCeeeeeeeecc
Q 047282          117 KLGQGGFGGVDKGFLR--ETNSFFSNWNVQL  145 (187)
Q Consensus       117 ~iG~G~fG~Vykg~l~--~~~~~vavK~i~~  145 (187)
                      .||+|+||.||+|..+  .++..+|+|.+..
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~   32 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKN   32 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccC
Confidence            5899999999999753  4467899998854

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=95.27  E-value=0.056  Score=42.17  Aligned_cols=32  Identities=25%  Similarity=0.305  Sum_probs=27.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH  147 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~  147 (187)
                      +.||.|++|.||++....++..+++|.+....
T Consensus         5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~   36 (225)
T smart00221        5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEK   36 (225)
T ss_pred             eEeecCCCeEEEEEEEcCCCcEEEEEeecccc
Confidence            67899999999999998767889999997654

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=95.26  E-value=0.04  Score=47.07  Aligned_cols=50  Identities=18%  Similarity=0.133  Sum_probs=34.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc-----hhhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH-----GKAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~-----~~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++....++..+|+|++....     ......+....+.++|+|
T Consensus        16 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpn   70 (328)
T cd07856          16 QPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHEN   70 (328)
T ss_pred             EeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCC
Confidence            78899999999999988778899999874321     122223344455666655

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=95.26  E-value=0.034  Score=45.85  Aligned_cols=31  Identities=23%  Similarity=0.541  Sum_probs=27.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++....++..+|+|.+...
T Consensus        10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~   40 (288)
T cd06616          10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRST   40 (288)
T ss_pred             HHhCCCCceEEEEEEECCCCCEEEEEEehhc
Confidence            5689999999999999887899999998653

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=95.26  E-value=0.043  Score=47.38  Aligned_cols=30  Identities=20%  Similarity=0.250  Sum_probs=24.9

Q ss_pred             cEEcccCCceEEEEEEcCCC-eeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETN-SFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~-~~vavK~i~~  145 (187)
                      ..||+|+||.||+|.....+ ..+|+|.+..
T Consensus        36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~   66 (340)
T PTZ00426         36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEK   66 (340)
T ss_pred             EEEeecCCeEEEEEEEECCCCeEEEEEEEEH
Confidence            78999999999999875533 5799999854

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=95.25  E-value=0.037  Score=44.32  Aligned_cols=28  Identities=25%  Similarity=0.361  Sum_probs=24.7

Q ss_pred             EcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          118 LGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       118 iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ||+|+||.||++....++..+++|.+..
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~   28 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKK   28 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeeh
Confidence            6899999999999887788999998865

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=95.24  E-value=0.047  Score=48.34  Aligned_cols=57  Identities=23%  Similarity=0.176  Sum_probs=41.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhH-HHHHHHHHHHhCCCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAV-ALCKGLFRDIRNPTGPYGGEA  172 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~-~~~~~~~~~Ir~~n~~~~~~~  172 (187)
                      +.||+|..|+|||+.++.++..+|+|.|....+... +.-..|++-+++-+.+|.-.-
T Consensus        85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~  142 (364)
T KOG0581|consen   85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGF  142 (364)
T ss_pred             hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeE
Confidence            889999999999999998899999999954333222 223345555666777775443

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=95.23  E-value=0.037  Score=47.02  Aligned_cols=31  Identities=16%  Similarity=0.329  Sum_probs=26.6

Q ss_pred             cEEccc--CCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQG--GFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G--~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      .+||+|  +|+.||++....++..+|+|++...
T Consensus         4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~   36 (327)
T cd08227           4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLE   36 (327)
T ss_pred             hhccccccceEEEEEEeecccCcEEEEEEechh
Confidence            578999  7889999999888999999998653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=95.22  E-value=0.059  Score=42.98  Aligned_cols=31  Identities=19%  Similarity=0.352  Sum_probs=27.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||.|+||.||++....++..+++|++...
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~   36 (258)
T cd08215           6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLS   36 (258)
T ss_pred             eeeccCCCeEEEEEEEcCCCcEEEEEEeecc
Confidence            5789999999999999877889999998653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>PHA02988 hypothetical protein; Provisional

Probab=95.22  E-value=0.047  Score=45.57  Aligned_cols=29  Identities=10%  Similarity=0.011  Sum_probs=24.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..|++|++|.||+|...  +..+|+|.+...
T Consensus        26 ~~i~~g~~~~v~~~~~~--~~~vavK~~~~~   54 (283)
T PHA02988         26 VLIKENDQNSIYKGIFN--NKEVIIRTFKKF   54 (283)
T ss_pred             eEEeeCCceEEEEEEEC--CEEEEEEecccc
Confidence            56899999999999983  789999998653

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=95.21  E-value=0.023  Score=50.09  Aligned_cols=51  Identities=18%  Similarity=0.167  Sum_probs=36.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc--cch---hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL--KHG---KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~--~~~---~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|.||.|.++....++..||||++..  ++.   +...++....++++|+|.
T Consensus        28 ~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNI   83 (359)
T KOG0660|consen   28 EPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENI   83 (359)
T ss_pred             ccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCc
Confidence            678999999999999998899999999973  222   223344445555555553

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=95.21  E-value=0.013  Score=47.82  Aligned_cols=52  Identities=19%  Similarity=0.086  Sum_probs=30.8

Q ss_pred             EEcccCCceEEEEEEcCCCe-------eeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          117 KLGQGGFGGVDKGFLRETNS-------FFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       117 ~iG~G~fG~Vykg~l~~~~~-------~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      .||+|+||.||+|.....+.       .+++|.+..........+.++...++...|++
T Consensus         2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~   60 (258)
T cd05078           2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKH   60 (258)
T ss_pred             CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCC
Confidence            58999999999998754332       48888876543332233333444333333333

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=95.19  E-value=0.035  Score=45.50  Aligned_cols=30  Identities=23%  Similarity=0.293  Sum_probs=26.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|..+.++..+|+|.+..
T Consensus         7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~   36 (288)
T cd07833           7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKE   36 (288)
T ss_pred             EEecccCCeeEEEEEeCCCCcEEEEehhhh
Confidence            678999999999999987788999998854

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=95.19  E-value=0.04  Score=45.45  Aligned_cols=50  Identities=22%  Similarity=0.289  Sum_probs=34.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n  165 (187)
                      +.||+|+||.||++....++..+++|.+.....  .....+....+.++|+|
T Consensus        25 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~   76 (286)
T cd06614          25 EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPN   76 (286)
T ss_pred             HhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCC
Confidence            778999999999999986688899999865443  22222333344455544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=95.19  E-value=0.036  Score=44.57  Aligned_cols=52  Identities=23%  Similarity=0.317  Sum_probs=34.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      ..||.|+||.||+|....++..+++|.+.....  ......+++.++.-++++.
T Consensus         9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i   60 (256)
T cd06612           9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYI   60 (256)
T ss_pred             hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcE
Confidence            578999999999999987778899999865432  2233334443444344433

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=95.18  E-value=0.056  Score=43.51  Aligned_cols=31  Identities=26%  Similarity=0.289  Sum_probs=27.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|++|.||++....++..+++|++...
T Consensus         7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~   37 (264)
T cd06623           7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVD   37 (264)
T ss_pred             eeeeecCCeEEEEEEEcCCCcEEEEEEeccC
Confidence            6799999999999999887889999998654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=95.17  E-value=0.049  Score=45.15  Aligned_cols=30  Identities=30%  Similarity=0.442  Sum_probs=26.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||.|++|.||++....++..+|+|.+..
T Consensus         7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~   36 (287)
T cd06621           7 SRLGEGAGGSVTKCRLKNTGMIFALKTITT   36 (287)
T ss_pred             EEeccCCceEEEEEEECCCCeEEEEEEEec
Confidence            678999999999999987788999998864

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=95.17  E-value=0.068  Score=42.69  Aligned_cols=32  Identities=34%  Similarity=0.545  Sum_probs=27.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH  147 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~  147 (187)
                      ..||+|++|.||++.....+..+++|.+....
T Consensus         6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~   37 (254)
T cd06627           6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEK   37 (254)
T ss_pred             eEEcccCCeEEEEEEEcCCCcEEEEEEecccc
Confidence            67999999999999988778889999986543

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=95.15  E-value=0.047  Score=44.06  Aligned_cols=49  Identities=16%  Similarity=0.199  Sum_probs=32.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++.... +..+|+|.+.....  .....+....+.++|++
T Consensus        10 ~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~   60 (256)
T cd05112          10 QEIGSGQFGLVWLGYWLE-KRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPK   60 (256)
T ss_pred             eeecCcccceEEEEEEeC-CCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCC
Confidence            679999999999998864 56799998864322  23333334444555543

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=95.14  E-value=0.049  Score=44.53  Aligned_cols=30  Identities=30%  Similarity=0.495  Sum_probs=26.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||+|....++..+|+|++..
T Consensus         5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~   34 (282)
T cd07831           5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKK   34 (282)
T ss_pred             eeccccccceEEEEEEcCCCcEEEEEEehh
Confidence            678999999999999887788999998865

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=95.13  E-value=0.049  Score=46.48  Aligned_cols=30  Identities=23%  Similarity=0.226  Sum_probs=26.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus        11 ~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~   40 (337)
T cd07858          11 KPIGRGAYGIVCSAKNSETNEKVAIKKIAN   40 (337)
T ss_pred             EEeccCCCeEEEEEEecCCCCeEEEEEecc
Confidence            678999999999999887788999999854

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=95.13  E-value=0.041  Score=52.31  Aligned_cols=30  Identities=20%  Similarity=0.341  Sum_probs=27.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus        10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~   39 (669)
T cd05610          10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKK   39 (669)
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEEeh
Confidence            789999999999999987788999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=95.12  E-value=0.031  Score=55.52  Aligned_cols=62  Identities=16%  Similarity=0.068  Sum_probs=45.1

Q ss_pred             cEEcccCCceEEEEEEcCCCe-----eeeeeeeccc-chhhHHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 047282          116 GKLGQGGFGGVDKGFLRETNS-----FFSNWNVQLK-HGKAVALCKGLFRDIRNPTGPYGGEATGSNP  177 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~-----~vavK~i~~~-~~~~~~~~~~~~~~Ir~~n~~~~~~~~~~~~  177 (187)
                      ..||+|.||.||+|...+...     .||+|.+.+. .+++...|..|-.-|++=+|++.=-..||-.
T Consensus       698 ~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l  765 (1025)
T KOG1095|consen  698 RVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCL  765 (1025)
T ss_pred             eeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeec
Confidence            889999999999999875333     3899999764 3455566666667777777777655555543

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=95.12  E-value=0.048  Score=53.90  Aligned_cols=30  Identities=17%  Similarity=0.224  Sum_probs=27.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ++||+|+||.||+|....++..+|+|++..
T Consensus         8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~   37 (932)
T PRK13184          8 RLIGKGGMGEVYLAYDPVCSRRVALKKIRE   37 (932)
T ss_pred             EEEecCCCEEEEEEEECCCCcEEEEEEECc
Confidence            789999999999999887788999999864

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=95.12  E-value=0.064  Score=43.24  Aligned_cols=53  Identities=17%  Similarity=0.265  Sum_probs=35.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||.|+||.||++....++..+++|.+.............+++.++.-++++
T Consensus         9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~   61 (262)
T cd06613           9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPN   61 (262)
T ss_pred             EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCC
Confidence            67899999999999987767889999886543333333444444444444443

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=95.11  E-value=0.056  Score=45.32  Aligned_cols=31  Identities=29%  Similarity=0.278  Sum_probs=27.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++....++..+|+|.+...
T Consensus         7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~   37 (316)
T cd05574           7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKK   37 (316)
T ss_pred             eeecCCccEEEEEEEEcCCCcEEEEEEEecc
Confidence            6789999999999999877889999998653

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=95.10  E-value=0.047  Score=48.58  Aligned_cols=30  Identities=23%  Similarity=0.192  Sum_probs=24.1

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~  145 (187)
                      .+||+|+||.||+|....     .+..+|+|++..
T Consensus        43 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~   77 (400)
T cd05105          43 RILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKP   77 (400)
T ss_pred             heecCCCCceEEEEEEcccCCCCCceEEEEEecCC
Confidence            889999999999998632     234699999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=95.10  E-value=0.041  Score=44.82  Aligned_cols=30  Identities=27%  Similarity=0.253  Sum_probs=24.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|...+ +..+|+|.+...
T Consensus        10 ~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~   39 (256)
T cd05113          10 KELGTGQFGVVKYGKWRG-QYDVAIKMIKEG   39 (256)
T ss_pred             eEecCcccceEEEEEecC-CCcEEEEEcCCC
Confidence            678999999999998765 556999988643

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=95.09  E-value=0.066  Score=42.97  Aligned_cols=30  Identities=20%  Similarity=0.340  Sum_probs=26.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||.|+||.||++....++..+|+|.+..
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~   35 (265)
T cd08217           6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDY   35 (265)
T ss_pred             eeeccCCCeEEEEeeecCCCCEEEEEEEec
Confidence            678999999999999887788899998854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=95.08  E-value=0.049  Score=45.06  Aligned_cols=29  Identities=24%  Similarity=0.381  Sum_probs=25.4

Q ss_pred             EEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          117 KLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       117 ~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +||+|+||.||++....++..+|+|.+..
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~   29 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDK   29 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeec
Confidence            47999999999999877788999998865

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=95.06  E-value=0.063  Score=44.11  Aligned_cols=31  Identities=26%  Similarity=0.277  Sum_probs=24.7

Q ss_pred             cEEcccCCceEEEEEEcCCCe----eeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNS----FFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~----~vavK~i~~~  146 (187)
                      ..||+|+||.||+|..+.++.    .+|+|.+...
T Consensus        13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~   47 (279)
T cd05057          13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREE   47 (279)
T ss_pred             ceecCCCCccEEEEEEecCCCCcceEEEEEeccCC
Confidence            789999999999999865443    5888887654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=95.05  E-value=0.057  Score=44.06  Aligned_cols=31  Identities=29%  Similarity=0.462  Sum_probs=27.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|++|.||++....++..+++|.+...
T Consensus         5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~   35 (283)
T cd05118           5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLR   35 (283)
T ss_pred             eeeecCCCceEEEEEcCCCCcEEEEEEeccc
Confidence            5789999999999999877889999998653

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.02  E-value=0.047  Score=48.44  Aligned_cols=51  Identities=24%  Similarity=0.279  Sum_probs=36.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc-----c---hhhHHHHHHHHHHHh-CCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK-----H---GKAVALCKGLFRDIR-NPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~-----~---~~~~~~~~~~~~~Ir-~~n~  166 (187)
                      ..||+|.||.||.|....++..+|+|.+..+     .   .+....+....+.++ |||-
T Consensus        23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI   82 (370)
T KOG0583|consen   23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNI   82 (370)
T ss_pred             eeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCE
Confidence            8899999999999998887899999966553     1   112223444566677 6643

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=95.02  E-value=0.043  Score=45.30  Aligned_cols=31  Identities=19%  Similarity=0.230  Sum_probs=24.9

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++..+.     ++..+|+|.+...
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~   46 (288)
T cd05050          11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE   46 (288)
T ss_pred             ccccccccccEEEEEEcccCCCCcceeEEEEecCCC
Confidence            678999999999998642     4568999988653

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05119 RIO RIO kinase family, catalytic domain

Probab=95.02  E-value=0.025  Score=44.05  Aligned_cols=29  Identities=14%  Similarity=0.028  Sum_probs=25.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||+|... ++..+|||.+..
T Consensus         3 ~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~   31 (187)
T cd05119           3 GPIGTGKEADVYLALDG-DGEPVAVKIYRT   31 (187)
T ss_pred             cccccccceeEEEEECC-CCCEEEEEEEec
Confidence            57899999999999987 478999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=94.99  E-value=0.046  Score=47.81  Aligned_cols=30  Identities=20%  Similarity=0.138  Sum_probs=24.0

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~  145 (187)
                      +.||+|+||.||++....     ++..+|+|.+..
T Consensus        44 ~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~   78 (374)
T cd05106          44 KTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKA   78 (374)
T ss_pred             heecCCCcccEEEEEEecCCcccccceeEEEeccC
Confidence            889999999999988532     234699999864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=94.99  E-value=0.045  Score=44.87  Aligned_cols=30  Identities=20%  Similarity=0.253  Sum_probs=23.8

Q ss_pred             cEEcccCCceEEEEEEcCCCe--eeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNS--FFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~--~vavK~i~~  145 (187)
                      +.||+|+||.||+|...+++.  .+++|.+..
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~   32 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE   32 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccc
Confidence            368999999999999876554  468888764

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=94.99  E-value=0.049  Score=44.09  Aligned_cols=31  Identities=32%  Similarity=0.486  Sum_probs=27.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||.|+||.||++....++..+++|.+...
T Consensus         7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~   37 (265)
T cd06605           7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLE   37 (265)
T ss_pred             HHhcCCCCeEEEEEEEcCCCcEEEEEEEecc
Confidence            5689999999999999877889999988654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=94.98  E-value=0.056  Score=44.19  Aligned_cols=53  Identities=19%  Similarity=0.296  Sum_probs=35.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch----hhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG----KAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~----~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|....++..+|+|.+.....    .....+....+.+++..+++
T Consensus         7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   63 (277)
T cd06917           7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPN   63 (277)
T ss_pred             hheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCC
Confidence            578999999999999877788999998854321    22233344555666333443

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=94.97  E-value=0.062  Score=43.84  Aligned_cols=54  Identities=15%  Similarity=0.037  Sum_probs=33.6

Q ss_pred             cEEcccCCceEEEEEEcCC---Ceeeeeeeecccc-hhhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRET---NSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~---~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      ..||+|+||.||+|...+.   ...+++|...... ......+..+++.+++-.+++.
T Consensus        12 ~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i   69 (270)
T cd05056          12 RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHI   69 (270)
T ss_pred             eeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCch
Confidence            7899999999999987542   2468889876533 2233334444444444444443

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=94.96  E-value=0.042  Score=44.60  Aligned_cols=49  Identities=18%  Similarity=0.171  Sum_probs=32.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++.... +..+|+|.+.....  .....+.+..+.++|+|
T Consensus        10 ~~lg~G~~~~v~~~~~~~-~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~   60 (256)
T cd05059          10 KELGSGQFGVVHLGKWRG-KIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPN   60 (256)
T ss_pred             hhhccCCCceEEEeEecC-CccEEEEEeccCCCCHHHHHHHHHHHHhCCCCC
Confidence            679999999999998865 56789998854321  22223333444555544

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=94.96  E-value=0.065  Score=43.78  Aligned_cols=30  Identities=23%  Similarity=0.318  Sum_probs=23.4

Q ss_pred             EEcccCCceEEEEEEcC--CCeeeeeeeeccc
Q 047282          117 KLGQGGFGGVDKGFLRE--TNSFFSNWNVQLK  146 (187)
Q Consensus       117 ~iG~G~fG~Vykg~l~~--~~~~vavK~i~~~  146 (187)
                      .||+|+||.||+|...+  ++..+|+|++...
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~   33 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVS   33 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCC
Confidence            58999999999998653  2356899988543

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=94.94  E-value=0.047  Score=45.77  Aligned_cols=51  Identities=22%  Similarity=0.212  Sum_probs=32.5

Q ss_pred             cEEcccCCceEEEEEEcCCCe----eeeeeeecccch-h---hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNS----FFSNWNVQLKHG-K---AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~----~vavK~i~~~~~-~---~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++.    .+|+|.+..... .   ....+....+.++|+|-
T Consensus        13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~ni   71 (303)
T cd05110          13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL   71 (303)
T ss_pred             cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCc
Confidence            679999999999998765454    468887764322 1   12223334445666663

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=94.94  E-value=0.06  Score=45.45  Aligned_cols=30  Identities=17%  Similarity=0.211  Sum_probs=26.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|++..
T Consensus         6 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~   35 (330)
T cd07834           6 KPIGSGAYGVVCSAVDKRTGRKVAIKKISN   35 (330)
T ss_pred             eeecCCCCeEEEEEEeCCCCcEEEEEeecc
Confidence            679999999999999887788999998865

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=94.94  E-value=0.057  Score=51.24  Aligned_cols=31  Identities=29%  Similarity=0.427  Sum_probs=28.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      .+||+|.||.|+.+.++.++..+|||.+.+.
T Consensus       374 ~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~  404 (694)
T KOG0694|consen  374 AVLGRGSFGKVLLAELKGTNEYYAIKVLKKG  404 (694)
T ss_pred             EEeccCcCceEEEEEEcCCCcEEEEEEeecc
Confidence            7899999999999999998999999998663

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=94.92  E-value=0.047  Score=46.46  Aligned_cols=30  Identities=30%  Similarity=0.315  Sum_probs=26.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|++..
T Consensus        13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~   42 (337)
T cd07852          13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFD   42 (337)
T ss_pred             HhhcCCCCeeEEEEEEcCCCeEEEEEeecc
Confidence            678999999999999887788999998853

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=94.90  E-value=0.07  Score=44.14  Aligned_cols=30  Identities=20%  Similarity=0.233  Sum_probs=26.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus        28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~   57 (291)
T cd06639          28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDP   57 (291)
T ss_pred             EEeecCCCeEEEEEEECCCCCEEEEEEecc
Confidence            678999999999999987788999998864

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=94.90  E-value=0.0011  Score=56.74  Aligned_cols=62  Identities=19%  Similarity=0.154  Sum_probs=49.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh-----hHHHHHHHHHHHhCCCCCCCCCCCCCCc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK-----AVALCKGLFRDIRNPTGPYGGEATGSNP  177 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~-----~~~~~~~~~~~Ir~~n~~~~~~~~~~~~  177 (187)
                      ++||+|.||.||+++...++..||+|++...+++     ....+...++.+.|+|.++-.|+|-.+.
T Consensus        23 ~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~   89 (376)
T KOG0669|consen   23 AKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKA   89 (376)
T ss_pred             HhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhcc
Confidence            7899999999999999888889999987654443     2345566777889999999988876553

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=94.88  E-value=0.069  Score=43.13  Aligned_cols=48  Identities=21%  Similarity=0.308  Sum_probs=32.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++...  +..+|+|.+.....  +....+....+.++|+|
T Consensus        12 ~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~   61 (256)
T cd05039          12 ATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPN   61 (256)
T ss_pred             eeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcc
Confidence            78999999999999875  57899999865433  12223333444555554

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=94.87  E-value=0.059  Score=44.53  Aligned_cols=51  Identities=18%  Similarity=0.171  Sum_probs=33.1

Q ss_pred             cEEcccCCceEEEEEEcCCC----------------eeeeeeeecccchh-hH---HHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETN----------------SFFSNWNVQLKHGK-AV---ALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~----------------~~vavK~i~~~~~~-~~---~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++.....+                ..+|+|.+...... ..   ..+...++.++|+|-
T Consensus        11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i   81 (296)
T cd05051          11 EKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNI   81 (296)
T ss_pred             ccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCE
Confidence            78999999999999875422                45799988654322 22   223344556666653

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=94.87  E-value=0.074  Score=43.73  Aligned_cols=52  Identities=15%  Similarity=0.071  Sum_probs=33.4

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeecccc-hhhHHHHHHHHHHHhCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTGP  167 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~  167 (187)
                      +.||+|+||.||+|....     ....+++|.+.... ......+..++..+++-+++
T Consensus        12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~   69 (277)
T cd05036          12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQ   69 (277)
T ss_pred             eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCC
Confidence            789999999999999875     56778999875432 22222333344444444443

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=94.86  E-value=0.064  Score=43.61  Aligned_cols=49  Identities=22%  Similarity=0.226  Sum_probs=32.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++.... +..+|+|.+.....  .....+....+.++|+|
T Consensus        12 ~~ig~g~~~~v~~~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~   62 (260)
T cd05069          12 VKLGQGCFGEVWMGTWNG-TTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDK   62 (260)
T ss_pred             eeecCcCCCeEEEEEEcC-CceEEEEEcccCCccHHHHHHHHHHHHhCCCCC
Confidence            678999999999999876 45689998754322  12233334455566665

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=94.82  E-value=0.034  Score=47.79  Aligned_cols=30  Identities=20%  Similarity=0.165  Sum_probs=24.0

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|...+     ++..+|+|++..
T Consensus        13 ~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~   47 (337)
T cd05054          13 KPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKE   47 (337)
T ss_pred             cccccCcCceEEeccccccccccccceeeeeeccC
Confidence            789999999999997533     246799998864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=94.78  E-value=0.084  Score=43.13  Aligned_cols=30  Identities=27%  Similarity=0.426  Sum_probs=26.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||+|....++..+|+|.+..
T Consensus         5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~   34 (287)
T cd07838           5 AEIGEGAYGTVYKARDLNTGRFVALKKVRV   34 (287)
T ss_pred             EEecccCceEEEEEEECCCCCEEEEEEecc
Confidence            678999999999999987788999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=94.77  E-value=0.094  Score=42.26  Aligned_cols=54  Identities=20%  Similarity=0.089  Sum_probs=36.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      +.||+|+||.||.+....++..+++|.+....  ......+..+++.+++-++++.
T Consensus         6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i   61 (256)
T cd08221           6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNI   61 (256)
T ss_pred             eEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCe
Confidence            67999999999998887778899999876432  2233334445555555555543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=94.75  E-value=0.012  Score=56.70  Aligned_cols=51  Identities=18%  Similarity=0.210  Sum_probs=36.6

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeecccchh----hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQLKHGK----AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~~~~~----~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|.||.||+|....     +.+.||||.+..+.+.    +++.+.+.+.++.|+|.
T Consensus       492 ~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nI  551 (774)
T KOG1026|consen  492 EELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNI  551 (774)
T ss_pred             hhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCe
Confidence            889999999999998753     2457999999764433    34445555567777763

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=94.75  E-value=0.089  Score=42.33  Aligned_cols=30  Identities=20%  Similarity=0.292  Sum_probs=26.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|++..
T Consensus         6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~   35 (257)
T cd08223           6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNL   35 (257)
T ss_pred             EEecCCCCeEEEEEEEcCCCcEEEEEEEeh
Confidence            678999999999999887778899999854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=94.75  E-value=0.09  Score=43.13  Aligned_cols=51  Identities=18%  Similarity=0.125  Sum_probs=32.9

Q ss_pred             cEEcccCCceEEEEEEcC----CCeeeeeeeecccch-hhHH---HHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE----TNSFFSNWNVQLKHG-KAVA---LCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~----~~~~vavK~i~~~~~-~~~~---~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....    .+..+++|.+..... ....   .+....+.++|+|-
T Consensus        12 ~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni   70 (280)
T cd05043          12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNI   70 (280)
T ss_pred             eeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCC
Confidence            789999999999999864    246788888754322 2222   23333445666663

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=94.73  E-value=0.077  Score=43.97  Aligned_cols=50  Identities=14%  Similarity=0.119  Sum_probs=31.7

Q ss_pred             cEEcccCCceEEEEEEc-----CCCeeeeeeeecccchhhHHHHHHHHH---HHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLR-----ETNSFFSNWNVQLKHGKAVALCKGLFR---DIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~-----~~~~~vavK~i~~~~~~~~~~~~~~~~---~Ir~~n  165 (187)
                      +.||+|+||.||++...     .++..+|+|.+.............+++   .++|++
T Consensus        11 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~   68 (288)
T cd05093          11 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH   68 (288)
T ss_pred             cccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCC
Confidence            78999999999999852     234568999886544333333333444   454543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=94.73  E-value=0.067  Score=45.84  Aligned_cols=50  Identities=16%  Similarity=0.171  Sum_probs=34.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc---h--hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH---G--KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~---~--~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..+|+|.+....   .  .....+....+.++|+|
T Consensus        21 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   75 (343)
T cd07851          21 SPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHEN   75 (343)
T ss_pred             EEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCC
Confidence            78899999999999998778899999885421   1  11222344555666665

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=94.73  E-value=0.078  Score=48.08  Aligned_cols=52  Identities=8%  Similarity=-0.078  Sum_probs=33.6

Q ss_pred             cEEcccCCceEEEEEEcCC-CeeeeeeeecccchhhHHHHHHHHHHHhCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRET-NSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGP  167 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~-~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~  167 (187)
                      ..||+|+||.||++....+ +..+|+|.+.............+++.++.-+|+
T Consensus        73 ~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hp  125 (478)
T PTZ00267         73 TLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHF  125 (478)
T ss_pred             EEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCC
Confidence            7899999999999987665 567888877544333333333344444444443

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=94.73  E-value=0.06  Score=44.58  Aligned_cols=50  Identities=18%  Similarity=0.219  Sum_probs=31.5

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeecccchh----hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQLKHGK----AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~~~~~----~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|+...     ....+++|.+......    ....+....+.++|+|
T Consensus         6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~   64 (290)
T cd05045           6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPH   64 (290)
T ss_pred             ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCC
Confidence            678999999999998642     2246888887543221    2223334455666665

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=94.72  E-value=0.072  Score=43.99  Aligned_cols=30  Identities=30%  Similarity=0.319  Sum_probs=23.4

Q ss_pred             cEEcccCCceEEEEEEcCCCe----eeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNS----FFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~----~vavK~i~~  145 (187)
                      +.||+|+||.||+|....++.    .+++|.+..
T Consensus        13 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~   46 (279)
T cd05111          13 KLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQD   46 (279)
T ss_pred             cccCccCCcceEEEEEcCCCCceeeEEEEeeccc
Confidence            789999999999999765454    367777743

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=94.69  E-value=0.09  Score=42.89  Aligned_cols=30  Identities=23%  Similarity=0.285  Sum_probs=23.9

Q ss_pred             cEEcccCCceEEEEEEcCC---Ceeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRET---NSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~---~~~vavK~i~~  145 (187)
                      +.||+|+||.||+|....+   +..+|+|.+..
T Consensus        10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~   42 (267)
T cd05066          10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKA   42 (267)
T ss_pred             eeecccCCCceEEEEEecCCCCceEEEEEECCC
Confidence            7899999999999987532   34689998854

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=94.69  E-value=0.052  Score=44.80  Aligned_cols=50  Identities=18%  Similarity=0.283  Sum_probs=32.2

Q ss_pred             cEEcccCCceEEEEEE----cCCCeeeeeeeecccch-h---hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFL----RETNSFFSNWNVQLKHG-K---AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l----~~~~~~vavK~i~~~~~-~---~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||.+..    ..++..+|+|.+..... .   ....+....+.++|+|
T Consensus        10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~   67 (284)
T cd05079          10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHEN   67 (284)
T ss_pred             eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCC
Confidence            6799999999999874    23467899999864322 1   2222333445555554

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=94.66  E-value=0.1  Score=42.14  Aligned_cols=30  Identities=17%  Similarity=0.254  Sum_probs=26.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus         6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~   35 (255)
T cd08219           6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRL   35 (255)
T ss_pred             EEeeccCCeEEEEEEEcCCCceEEEEEEEc
Confidence            679999999999999887788999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=94.63  E-value=0.09  Score=45.16  Aligned_cols=51  Identities=12%  Similarity=-0.021  Sum_probs=35.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hh---hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GK---AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~---~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++....++..+|+|.+....  ..   ....+....+.++|+|.
T Consensus        22 ~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   77 (353)
T cd07850          22 KPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNI   77 (353)
T ss_pred             EEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCC
Confidence            77899999999999988778899999985421  11   12223344455666654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=94.63  E-value=0.098  Score=42.68  Aligned_cols=54  Identities=17%  Similarity=0.093  Sum_probs=34.1

Q ss_pred             cEEcccCCceEEEEEEcCC-----Ceeeeeeeecccc-hhhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRET-----NSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~-----~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      ..||+|+||.||+|.....     +..+|+|.+.... ......+..+++.++.-+++|.
T Consensus        12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i   71 (277)
T cd05032          12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHV   71 (277)
T ss_pred             eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCce
Confidence            7899999999999987542     3679999985432 2222333444444444444443

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=94.62  E-value=0.043  Score=44.60  Aligned_cols=30  Identities=23%  Similarity=0.267  Sum_probs=23.6

Q ss_pred             cEEcccCCceEEEEEEcCCC------eeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETN------SFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~------~~vavK~i~~  145 (187)
                      +.||+|+||.||+|...+..      ..+|+|.+..
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~   36 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRK   36 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhc
Confidence            46899999999999875422      5789998754

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=94.55  E-value=0.099  Score=43.76  Aligned_cols=31  Identities=19%  Similarity=0.245  Sum_probs=27.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++....++..+++|.+...
T Consensus         7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~   37 (305)
T cd05609           7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQ   37 (305)
T ss_pred             eEeecCCCeeEEEEEECCCCcEEEEEEeehh
Confidence            6789999999999999887889999988653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=94.52  E-value=0.064  Score=43.79  Aligned_cols=50  Identities=18%  Similarity=0.236  Sum_probs=32.4

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeecccchh----hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQLKHGK----AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~~~~~----~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|+...     ....+++|.+......    ....+....+.++|+|
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~   69 (275)
T cd05046          11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKN   69 (275)
T ss_pred             eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcc
Confidence            678999999999999753     2346888888653322    2233344455566654

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=94.50  E-value=0.09  Score=39.75  Aligned_cols=46  Identities=17%  Similarity=0.263  Sum_probs=32.3

Q ss_pred             EcccCCceEEEEEEcCCCeeeeeeeecccch----hhHHHHHHHHHHHhC
Q 047282          118 LGQGGFGGVDKGFLRETNSFFSNWNVQLKHG----KAVALCKGLFRDIRN  163 (187)
Q Consensus       118 iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~----~~~~~~~~~~~~Ir~  163 (187)
                      ||+|.+|.||++....++..+++|.+.....    .....+....+.++|
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~   50 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNH   50 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCC
Confidence            6899999999999976678899999876543    223333344444544

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=94.45  E-value=0.11  Score=42.66  Aligned_cols=30  Identities=30%  Similarity=0.409  Sum_probs=23.8

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~  145 (187)
                      +.||+|+||.||+|....     .+..+|+|.+..
T Consensus        12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~   46 (277)
T cd05062          12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNE   46 (277)
T ss_pred             eeeccccCCeEEEEEeccCCCCCceeEEEEEeccc
Confidence            789999999999987642     245799998854

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=94.44  E-value=0.097  Score=42.92  Aligned_cols=31  Identities=32%  Similarity=0.443  Sum_probs=24.8

Q ss_pred             cEEcccCCceEEEEEEcCCC-----eeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETN-----SFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~-----~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|.....+     ..+|+|.+...
T Consensus        11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~   46 (283)
T cd05048          11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN   46 (283)
T ss_pred             hcccCccCCcEEEEEEecCCCCcceeeEEEEecccC
Confidence            67999999999999875533     57899988643

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=94.43  E-value=0.1  Score=42.99  Aligned_cols=50  Identities=14%  Similarity=0.104  Sum_probs=31.8

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeecccchhhHHHHHHH---HHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQLKHGKAVALCKGL---FRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~~~~~~~~~~~~~---~~~Ir~~n  165 (187)
                      ..||+|+||.||++..+.     ++..+|+|.+..........+..+   +..++|+|
T Consensus        11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~   68 (280)
T cd05092          11 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQH   68 (280)
T ss_pred             cccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCC
Confidence            679999999999997532     345788898765443333333333   34455544

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>PHA02882 putative serine/threonine kinase; Provisional

Probab=94.42  E-value=0.093  Score=43.89  Aligned_cols=28  Identities=25%  Similarity=0.182  Sum_probs=22.0

Q ss_pred             cEEcccCCceEEEEEEcCC---Ceeeeeeee
Q 047282          116 GKLGQGGFGGVDKGFLRET---NSFFSNWNV  143 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~---~~~vavK~i  143 (187)
                      ++||+|+||.||+|...++   ...+|+|..
T Consensus        18 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~   48 (294)
T PHA02882         18 KLIGCGGFGCVYETQCASDHCINNQAVAKIE   48 (294)
T ss_pred             eEEecCCCceEEEEEEcCCcccccceEEEec
Confidence            7899999999999998765   445666653

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=94.35  E-value=0.11  Score=42.39  Aligned_cols=29  Identities=21%  Similarity=0.264  Sum_probs=21.9

Q ss_pred             EEcccCCceEEEEEEcC--CCeeeeeeeecc
Q 047282          117 KLGQGGFGGVDKGFLRE--TNSFFSNWNVQL  145 (187)
Q Consensus       117 ~iG~G~fG~Vykg~l~~--~~~~vavK~i~~  145 (187)
                      .||+|+||.||+|....  ....+++|.+..
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~   32 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRA   32 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCc
Confidence            58999999999997643  234678887753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=94.31  E-value=0.087  Score=42.93  Aligned_cols=31  Identities=29%  Similarity=0.413  Sum_probs=27.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....++..+|+|.+...
T Consensus         5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~   35 (282)
T cd07829           5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLD   35 (282)
T ss_pred             hcccccCcceEEEeeecCCCcEEEEEEeccc
Confidence            5689999999999999877889999988653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=94.30  E-value=0.065  Score=43.34  Aligned_cols=48  Identities=19%  Similarity=0.246  Sum_probs=31.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh-hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK-AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~-~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++..  .+..+|+|.+...... ....+....+.++|+|
T Consensus        12 ~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~   60 (254)
T cd05083          12 EIIGEGEFGAVLQGEY--TGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKN   60 (254)
T ss_pred             eeeccCCCCceEeccc--CCCceEEEeecCcchHHHHHHHHHHHHhCCCCC
Confidence            7899999999999975  3577999988643221 2222333344455554

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=94.28  E-value=0.13  Score=42.50  Aligned_cols=31  Identities=32%  Similarity=0.424  Sum_probs=24.1

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|...+     .+..+|+|.+...
T Consensus        12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~   47 (288)
T cd05061          12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES   47 (288)
T ss_pred             eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCc
Confidence            789999999999997642     2457899987543

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=94.28  E-value=0.088  Score=44.16  Aligned_cols=30  Identities=20%  Similarity=0.253  Sum_probs=23.6

Q ss_pred             cEEcccCCceEEEEEEcCCCe--eeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNS--FFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~--~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++.  .+++|++..
T Consensus        13 ~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~   44 (303)
T cd05088          13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE   44 (303)
T ss_pred             eeecCCCCceEEEEEEccCCceeeEEEEEecc
Confidence            679999999999999865554  457787754

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=94.22  E-value=0.063  Score=52.45  Aligned_cols=50  Identities=24%  Similarity=0.179  Sum_probs=32.0

Q ss_pred             cEEcccCCceEEEEEE-cC---CCeeeeeeeecccc-hhhHHHH---HHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFL-RE---TNSFFSNWNVQLKH-GKAVALC---KGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l-~~---~~~~vavK~i~~~~-~~~~~~~---~~~~~~Ir~~n  165 (187)
                      .+||.|.||+||||.. |+   -..+||+|.+.... .+...++   .-.+-.++|+|
T Consensus       702 kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpn  759 (1177)
T KOG1025|consen  702 KVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPN  759 (1177)
T ss_pred             ceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCch
Confidence            8899999999999975 43   12478999885532 2233333   33344566655

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=94.16  E-value=0.05  Score=49.78  Aligned_cols=49  Identities=18%  Similarity=0.229  Sum_probs=38.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc--chhhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK--HGKAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~--~~~~~~~~~~~~~~Ir~~n  165 (187)
                      +.||+|-||.|+.|.... ...||+|.+...  ....+.++.+.++.|+|++
T Consensus       212 ~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~  262 (468)
T KOG0197|consen  212 RELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMSPEAFLREAQIMKKLRHEK  262 (468)
T ss_pred             HHhcCCccceEEEEEEcC-CCcccceEEeccccChhHHHHHHHHHHhCcccC
Confidence            889999999999999976 457999998653  2345556777777888876

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=94.15  E-value=0.082  Score=43.96  Aligned_cols=31  Identities=23%  Similarity=0.238  Sum_probs=23.4

Q ss_pred             cEEcccCCceEEEEEEcCC--------------Ceeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRET--------------NSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~--------------~~~vavK~i~~~  146 (187)
                      +.||+|+||.||++.....              ...+|+|.+...
T Consensus        11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~   55 (295)
T cd05097          11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD   55 (295)
T ss_pred             hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC
Confidence            7799999999999876431              224899988653

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=94.14  E-value=0.12  Score=43.53  Aligned_cols=30  Identities=17%  Similarity=0.225  Sum_probs=26.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||+|....++..+|+|.+..
T Consensus        21 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~   50 (308)
T cd06634          21 REIGHGSFGAVYFARDVRNSEVVAIKKMSY   50 (308)
T ss_pred             HheeeCCCEEEEEEEEcCCCcEEEEEEEec
Confidence            678999999999999887788899998854

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=94.13  E-value=0.15  Score=41.84  Aligned_cols=31  Identities=23%  Similarity=0.293  Sum_probs=27.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||.|+||.||+|....++..+|+|.+...
T Consensus        22 ~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~   52 (282)
T cd06636          22 EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT   52 (282)
T ss_pred             eeeccCCCeEEEEEEEcCCCcEEEEEEEecC
Confidence            6789999999999999877889999988553

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=94.11  E-value=0.16  Score=40.70  Aligned_cols=30  Identities=37%  Similarity=0.514  Sum_probs=26.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||++....++..+++|.+..
T Consensus         6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~   35 (256)
T cd08530           6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDL   35 (256)
T ss_pred             eeecCCCceeEEEEEECCCCCEEEEEEEeh
Confidence            678999999999998877788899999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=94.06  E-value=0.13  Score=42.52  Aligned_cols=30  Identities=27%  Similarity=0.206  Sum_probs=24.2

Q ss_pred             cEEcccCCceEEEEEEcCC-----Ceeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRET-----NSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~-----~~~vavK~i~~  145 (187)
                      ..||+|+||.||++.....     ...+|+|.+..
T Consensus        18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~   52 (293)
T cd05053          18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKD   52 (293)
T ss_pred             eEecccccccEEEEEEecCCCCCCceeEEEEEccC
Confidence            7789999999999987532     35789998864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=93.99  E-value=0.1  Score=50.29  Aligned_cols=46  Identities=15%  Similarity=0.115  Sum_probs=34.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHH
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDI  161 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~I  161 (187)
                      +.|.+|||+.||.+.....+..+|+|++-...+.+......|+.-+
T Consensus        43 ~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~M   88 (738)
T KOG1989|consen   43 KVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIM   88 (738)
T ss_pred             EEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHH
Confidence            8899999999999999875589999999665555444444444433

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=93.96  E-value=0.15  Score=42.85  Aligned_cols=31  Identities=19%  Similarity=0.200  Sum_probs=24.2

Q ss_pred             cEEcccCCceEEEEEE-----cCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFL-----RETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l-----~~~~~~vavK~i~~~  146 (187)
                      +.||+|+||.||++..     ...+..+|+|.+...
T Consensus        41 ~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~   76 (302)
T cd05055          41 KTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPT   76 (302)
T ss_pred             ceeeccCCeeEEEEEEecCCCCCceeEEEEEecCcc
Confidence            8899999999999974     223457999988643

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=93.95  E-value=0.12  Score=41.81  Aligned_cols=29  Identities=24%  Similarity=0.328  Sum_probs=24.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++..+  +..+|+|.+...
T Consensus        12 ~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~   40 (256)
T cd05082          12 QTIGKGEFGDVMLGDYR--GNKVAVKCIKND   40 (256)
T ss_pred             eeecccCCCeEEEEEEc--CCcEEEEEeCCC
Confidence            77999999999999875  567899988653

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=93.91  E-value=0.15  Score=42.34  Aligned_cols=53  Identities=15%  Similarity=0.004  Sum_probs=33.0

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||++....     ++..+++|.+.............+++.+++-++++
T Consensus        11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~   68 (291)
T cd05094          11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH   68 (291)
T ss_pred             eeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCC
Confidence            789999999999997532     34568889886544333333334444444444443

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=93.83  E-value=0.14  Score=42.64  Aligned_cols=30  Identities=17%  Similarity=0.293  Sum_probs=23.7

Q ss_pred             cEEcccCCceEEEEEEcCCCe--eeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNS--FFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~--~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++.  .+++|.+..
T Consensus         8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~   39 (297)
T cd05089           8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKE   39 (297)
T ss_pred             eeecCCCcceEEEEEecCCCCcceeEEEEccc
Confidence            679999999999999876543  468887753

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=93.81  E-value=0.17  Score=40.81  Aligned_cols=32  Identities=19%  Similarity=0.300  Sum_probs=27.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH  147 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~  147 (187)
                      ..||+|+||.||+|....++..+++|.+....
T Consensus        12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~   43 (275)
T cd06608          12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE   43 (275)
T ss_pred             eeecCCCCeEEEEEEECCCCcEEEEEEEecCc
Confidence            67899999999999998777889999886543

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>PHA03207 serine/threonine kinase US3; Provisional

Probab=93.75  E-value=0.12  Score=45.28  Aligned_cols=49  Identities=12%  Similarity=-0.062  Sum_probs=34.0

Q ss_pred             cEEcccCCceEEEEEEcC--CCeeeeeeeecccchhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE--TNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~--~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++...+  .+..+++|.+....  ....+....+.|+|+|.
T Consensus        98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--~~~~E~~il~~l~h~~i  148 (392)
T PHA03207         98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--TPGREIDILKTISHRAI  148 (392)
T ss_pred             EeecCCCCeEEEEEEEcCCccceeEEEEeccccc--cHHHHHHHHHhcCCCCc
Confidence            789999999999997643  34678999886432  22334456667777664

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=93.75  E-value=0.12  Score=51.62  Aligned_cols=50  Identities=20%  Similarity=0.359  Sum_probs=35.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--h---hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--G---KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~---~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++....++..+|+|.+....  .   .....+...++.|+|+|
T Consensus        19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPN   73 (1021)
T PTZ00266         19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKN   73 (1021)
T ss_pred             EEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCC
Confidence            78999999999999998878889999885421  1   22233444555666665

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=93.72  E-value=0.2  Score=41.61  Aligned_cols=30  Identities=23%  Similarity=0.358  Sum_probs=27.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus        21 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~   50 (296)
T cd06618          21 GEIGSGTCGQVYKMRFKKTGHVMAVKQMRR   50 (296)
T ss_pred             eEeeccCCeEEEEEEECCCCeEEEEEEEec
Confidence            789999999999999987788999999864

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=93.57  E-value=0.11  Score=42.81  Aligned_cols=31  Identities=23%  Similarity=0.283  Sum_probs=23.5

Q ss_pred             cEEcccCCceEEEEEE----cCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFL----RETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l----~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||.+..    ..++..+|+|.+...
T Consensus        10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~   44 (283)
T cd05080          10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRE   44 (283)
T ss_pred             eecccCCCcEEEEeeEccccCCCCceEEEEEeccc
Confidence            6789999999977542    234678999988643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=93.45  E-value=0.2  Score=42.50  Aligned_cols=30  Identities=23%  Similarity=0.225  Sum_probs=24.7

Q ss_pred             cEEcccCCceEEEEEEc---CCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLR---ETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~---~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++...   .++..+|+|.+..
T Consensus         6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~   38 (332)
T cd05614           6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQK   38 (332)
T ss_pred             EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEH
Confidence            67999999999998763   3467899998864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=93.45  E-value=0.16  Score=43.18  Aligned_cols=30  Identities=27%  Similarity=0.252  Sum_probs=25.9

Q ss_pred             cEEcccCCceEEEEEEcCC--Ceeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRET--NSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~--~~~vavK~i~~  145 (187)
                      ..||+|+||.||++.....  +..+|+|++..
T Consensus         6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~   37 (332)
T cd07857           6 KELGQGAYGIVCSARNAETSEEETVAIKKITN   37 (332)
T ss_pred             EEccccCCeEEEEEEeCCCCcCceEEEEEecc
Confidence            5789999999999998766  77899998864

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=93.44  E-value=0.15  Score=41.17  Aligned_cols=30  Identities=23%  Similarity=0.356  Sum_probs=26.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|.....+..+|+|.+..
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~   31 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKK   31 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecc
Confidence            358999999999999877788999998854

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=93.42  E-value=0.058  Score=46.58  Aligned_cols=31  Identities=23%  Similarity=0.535  Sum_probs=27.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||.|.||+|+|=..+.+|...|||+|...
T Consensus        70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~  100 (361)
T KOG1006|consen   70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSN  100 (361)
T ss_pred             HHhcCCcchhhhhhhcCccCcEEEEEEeeec
Confidence            6789999999999988888999999999654

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=93.41  E-value=0.2  Score=40.76  Aligned_cols=30  Identities=23%  Similarity=0.376  Sum_probs=25.3

Q ss_pred             cEEcccCCceEEEEEEcC-CCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRE-TNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++.... .+..+|+|.+..
T Consensus         6 ~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~   36 (269)
T cd08528           6 EHLGSGAFGCVYKVRKKNNGQNLLALKEINV   36 (269)
T ss_pred             hhhcCCCCceEEEEEEcCCCCceeeeeEeec
Confidence            578999999999999876 567899998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=93.28  E-value=0.16  Score=42.22  Aligned_cols=50  Identities=18%  Similarity=0.245  Sum_probs=30.7

Q ss_pred             cEEcccCCceEEEEEEc----------------CCCeeeeeeeecccch-hh---HHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLR----------------ETNSFFSNWNVQLKHG-KA---VALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~----------------~~~~~vavK~i~~~~~-~~---~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++...                .+...+|+|.+..... ..   ...+....+.++|+|
T Consensus        11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (296)
T cd05095          11 EKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPN   80 (296)
T ss_pred             eeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCC
Confidence            77999999999987532                1234689998865322 12   223334445566655

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=93.24  E-value=0.12  Score=45.20  Aligned_cols=51  Identities=16%  Similarity=0.246  Sum_probs=37.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch------hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG------KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~------~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||.|+||+|...+.+.++..+|+|.+++...      .....++..++.+.||+-
T Consensus        50 ~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFl  106 (355)
T KOG0616|consen   50 KTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFL  106 (355)
T ss_pred             eeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCcee
Confidence            678999999999999998899999999976432      122334445556666653

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=93.23  E-value=0.09  Score=48.96  Aligned_cols=47  Identities=17%  Similarity=0.123  Sum_probs=36.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc------hhhHHHHHHHHHHHh
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH------GKAVALCKGLFRDIR  162 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~------~~~~~~~~~~~~~Ir  162 (187)
                      ..||+|+|.+||+|+...++.++|||.+.+..      .+-...+++.+..|.
T Consensus        79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~  131 (604)
T KOG0592|consen   79 KILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS  131 (604)
T ss_pred             heeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh
Confidence            89999999999999999999999999986532      223455666666663

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=93.05  E-value=0.24  Score=42.00  Aligned_cols=29  Identities=17%  Similarity=0.231  Sum_probs=24.0

Q ss_pred             EEccc--CCceEEEEEEcCCCeeeeeeeecc
Q 047282          117 KLGQG--GFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       117 ~iG~G--~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      .||+|  +||.||++....++..+|+|.+..
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~   35 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDL   35 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEecc
Confidence            35666  999999999877789999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=93.03  E-value=0.11  Score=48.23  Aligned_cols=50  Identities=26%  Similarity=0.344  Sum_probs=37.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHH---HHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKG---LFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~---~~~~Ir~~n  165 (187)
                      .+||+|..|.||.+.-..++.+||||++..........-.+   .++..+|+|
T Consensus       279 ~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~N  331 (550)
T KOG0578|consen  279 KKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPN  331 (550)
T ss_pred             hhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchH
Confidence            78999999999999988778999999997755443333333   444556655

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=92.97  E-value=0.17  Score=46.31  Aligned_cols=51  Identities=18%  Similarity=0.040  Sum_probs=35.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh----hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK----AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~----~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||.|..++||+|.....+..||||+++.++-.    ....+...+..++|||.
T Consensus        32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNI   86 (516)
T KOG0582|consen   32 EVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNI   86 (516)
T ss_pred             EEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCc
Confidence            6789999999999998766889999999764322    22223333445677764

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=92.95  E-value=0.2  Score=40.44  Aligned_cols=28  Identities=21%  Similarity=0.118  Sum_probs=20.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeee
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNV  143 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i  143 (187)
                      ..||+|+||.||++.....+..+++|.+
T Consensus         6 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~   33 (260)
T cd08222           6 QRLGKGSFGTVYLVKDKKAVAEERLKVL   33 (260)
T ss_pred             eeecCCCCceEEEEEecCCCCcceEEEe
Confidence            5799999999999987654444555544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=92.90  E-value=0.14  Score=49.94  Aligned_cols=66  Identities=14%  Similarity=0.037  Sum_probs=49.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCCCCCCCCCCceeee
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPYGGEATGSNPGISK  181 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~~~~~~~~~~~~~~  181 (187)
                      ..||.|.+|.|||++-..+++..|+|.+......+...+.+.....-+.+|++..+++|+=+.+.+
T Consensus        25 evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~   90 (953)
T KOG0587|consen   25 EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDP   90 (953)
T ss_pred             EEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecC
Confidence            678999999999999888888899998877655544444444444556899999999997665543

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=92.88  E-value=0.28  Score=40.11  Aligned_cols=51  Identities=16%  Similarity=0.071  Sum_probs=28.9

Q ss_pred             cEEcccCCceEEEEEEcCC--Ceeeeeeeecccc-hhhHHHHHHHH---HHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRET--NSFFSNWNVQLKH-GKAVALCKGLF---RDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~--~~~vavK~i~~~~-~~~~~~~~~~~---~~Ir~~n~  166 (187)
                      ..||+|+||.||+|.....  ...+++|.+.... ......+..++   +.++|+|.
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~i   57 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNI   57 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcch
Confidence            3689999999999976432  2345667665432 22223333333   34555544

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=92.80  E-value=0.053  Score=49.72  Aligned_cols=33  Identities=30%  Similarity=0.439  Sum_probs=29.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG  148 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~  148 (187)
                      .+||+||||.||-+..+.+|..+|.|++.+++.
T Consensus       191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRi  223 (591)
T KOG0986|consen  191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRI  223 (591)
T ss_pred             EEEecccccceeEEEEecchhhHHHHHHHHHHH
Confidence            889999999999999999999999999976543

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=92.75  E-value=0.17  Score=45.88  Aligned_cols=31  Identities=10%  Similarity=0.004  Sum_probs=26.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH  147 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~  147 (187)
                      ..||.|++|+||+|++++ |..||||......
T Consensus       123 ~plasaSigQVh~A~l~~-G~~VaVKv~rp~i  153 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVD-GKEVAVKVLRPGI  153 (437)
T ss_pred             cceeeeehhheEEEEecC-CCEEEEEeeCCCc
Confidence            568999999999999986 8899999986543

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=92.72  E-value=0.26  Score=41.06  Aligned_cols=30  Identities=20%  Similarity=0.117  Sum_probs=23.2

Q ss_pred             cEEcccCCceEEEEEEc-------CCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLR-------ETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~-------~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++...       ..+..+|+|.+..
T Consensus        21 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~   57 (304)
T cd05101          21 KPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKD   57 (304)
T ss_pred             ceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccc
Confidence            78999999999999742       1234689998864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=92.59  E-value=0.076  Score=39.61  Aligned_cols=34  Identities=9%  Similarity=0.027  Sum_probs=27.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhh
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKA  150 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~  150 (187)
                      .-|+.++.|+||+|++++ |..||||.........
T Consensus        17 ~PlasASiaQVh~a~l~~-g~~VaVKV~rP~i~~~   50 (119)
T PF03109_consen   17 EPLASASIAQVHRARLKD-GEEVAVKVQRPGIEEQ   50 (119)
T ss_pred             chhhheehhhheeeeecc-cchhhhhhcchHHHHH
Confidence            446888999999999987 8999999887654443

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=92.57  E-value=0.13  Score=48.06  Aligned_cols=33  Identities=9%  Similarity=-0.053  Sum_probs=28.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG  148 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~  148 (187)
                      .-||.|++|+||+|+++++|..||||.+.+...
T Consensus       125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~  157 (537)
T PRK04750        125 KPLASASIAQVHFARLKDNGREVVVKVLRPDIL  157 (537)
T ss_pred             hhhcCCCccEEEEEEECCCCCEEEEEEeCcchH
Confidence            568999999999999987789999999976443

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=92.44  E-value=0.13  Score=49.78  Aligned_cols=57  Identities=19%  Similarity=0.192  Sum_probs=41.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh---hHHHHHHHHHHHhCCC-CCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK---AVALCKGLFRDIRNPT-GPYGGEA  172 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~---~~~~~~~~~~~Ir~~n-~~~~~~~  172 (187)
                      -+||+|.||.||-|+..++..-+|||.|......   ..-++.+.-..|||+| .+|-|-+
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~  641 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSV  641 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhcc
Confidence            6799999999999998887778899999653322   2233444445788877 5777653

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=92.22  E-value=0.033  Score=48.85  Aligned_cols=31  Identities=35%  Similarity=0.656  Sum_probs=28.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      .+||+|+||+|||+..+++|+.+|+|++.-+
T Consensus        39 ~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~   69 (502)
T KOG0574|consen   39 GKLGEGSYGSVHKAIHRESGHVLAIKKVPVD   69 (502)
T ss_pred             HHhcCCcchHHHHHHHhccCcEEEEEecCcc
Confidence            7899999999999999999999999998653

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=92.15  E-value=0.13  Score=40.70  Aligned_cols=29  Identities=14%  Similarity=0.010  Sum_probs=25.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||++..+ ++..+|||.+..
T Consensus        21 ~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~   49 (198)
T cd05144          21 NQIGVGKESDVYLALDP-DGNPVALKFHRL   49 (198)
T ss_pred             CccccCcceEEEEEEcC-CCCEEEEEEEec
Confidence            78999999999999986 488999998653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=92.09  E-value=0.34  Score=40.51  Aligned_cols=31  Identities=19%  Similarity=0.109  Sum_probs=23.9

Q ss_pred             cEEcccCCceEEEEEEcC-------CCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRE-------TNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-------~~~~vavK~i~~~  146 (187)
                      +.||+|+||.||++....       ....+|+|.+...
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~   61 (307)
T cd05098          24 KPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSD   61 (307)
T ss_pred             eeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCC
Confidence            889999999999987532       1246899988653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=91.91  E-value=0.37  Score=40.94  Aligned_cols=51  Identities=16%  Similarity=0.076  Sum_probs=31.2

Q ss_pred             cEEcccCCceEEEEEEcC-------CCeeeeeeeecccch-h---hHHHHHHHHHHH-hCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE-------TNSFFSNWNVQLKHG-K---AVALCKGLFRDI-RNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-------~~~~vavK~i~~~~~-~---~~~~~~~~~~~I-r~~n~  166 (187)
                      ..||+|+||.||++....       ....+|+|.+..... .   ....+....+.+ +|+|-
T Consensus        18 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i   80 (334)
T cd05100          18 KPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNI   80 (334)
T ss_pred             ceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCe
Confidence            789999999999997532       123689998764322 1   222333444455 56554

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG3118 consensus Disrupter of silencing SAS10 [Chromatin structure and dynamics]

Probab=91.73  E-value=0.093  Score=47.92  Aligned_cols=36  Identities=36%  Similarity=0.603  Sum_probs=30.7

Q ss_pred             HHHHHHHHHH-HhCCCCCCCCCCCCCCceeeeeeeec
Q 047282          151 VALCKGLFRD-IRNPTGPYGGEATGSNPGISKSTRFK  186 (187)
Q Consensus       151 ~~~~~~~~~~-Ir~~n~~~~~~~~~~~~~~~~~~~~~  186 (187)
                      .+....++.. ++.+-+.|.||.+||+++..|||+||
T Consensus       481 ~k~~kgq~~~y~~~q~g~Y~GE~~GI~ag~~kSiklk  517 (517)
T KOG3118|consen  481 KKRLKGQVADYVRKQVGQYSGEKSGIRAGTKKSIKLK  517 (517)
T ss_pred             HHhhhhhhhHHhhhccccccchhcccchhhhhhcccC
Confidence            3445566666 89999999999999999999999986

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=91.69  E-value=0.25  Score=42.29  Aligned_cols=48  Identities=19%  Similarity=0.232  Sum_probs=34.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHH-HHHHhC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGL-FRDIRN  163 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~-~~~Ir~  163 (187)
                      ..||.|+||-+|.|.....|.+||||.-+..........+.. .+.|++
T Consensus        21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~   69 (341)
T KOG1163|consen   21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQG   69 (341)
T ss_pred             EeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhcc
Confidence            899999999999999877799999998765444333333333 333443

>smart00090 RIO RIO-like kinase

Probab=91.66  E-value=0.2  Score=41.55  Aligned_cols=30  Identities=10%  Similarity=0.010  Sum_probs=25.7

Q ss_pred             cEEcccCCceEEEEE-EcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGF-LRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~-l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|. ...++..+|+|.+..
T Consensus        34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~   64 (237)
T smart00090       34 GCISTGKEANVYHALDFDGSGKERAVKIYRT   64 (237)
T ss_pred             CeeccCcceeEEEEEecCCCCcEEEEEEEEc
Confidence            789999999999998 444588999998864

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=91.60  E-value=0.24  Score=42.34  Aligned_cols=32  Identities=25%  Similarity=0.243  Sum_probs=26.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH  147 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~  147 (187)
                      ..+|+|||..||.+.--.++..+|+|++....
T Consensus        27 ~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~   58 (302)
T KOG2345|consen   27 RLLGEGGFSFVDLVKGLSTGHLYALKKILCHS   58 (302)
T ss_pred             eeecCCCceeeeeecccCcccchhhheeeccc
Confidence            78999999999988865667889999996544

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=91.52  E-value=0.38  Score=39.54  Aligned_cols=29  Identities=28%  Similarity=0.295  Sum_probs=25.1

Q ss_pred             EcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          118 LGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       118 iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ||+|+||.||++..+.++..+|+|.+...
T Consensus        24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~   52 (267)
T PHA03390         24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAK   52 (267)
T ss_pred             ecCCCceEEEEEEEcCCCcEEEEEEEehh
Confidence            69999999999998877888999988653

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=91.47  E-value=0.31  Score=45.02  Aligned_cols=55  Identities=13%  Similarity=0.119  Sum_probs=42.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-----------------hhHHHHHHHHHHHhCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-----------------KAVALCKGLFRDIRNPTGPYGG  170 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-----------------~~~~~~~~~~~~Ir~~n~~~~~  170 (187)
                      ..||+|.||.|-+|+...++..+|||.+.+...                 .....+.+.+.+++|+|.---.
T Consensus       103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li  174 (576)
T KOG0585|consen  103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI  174 (576)
T ss_pred             hhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence            779999999999999888889999999865321                 1345667778889998864433

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=91.46  E-value=0.35  Score=43.82  Aligned_cols=50  Identities=24%  Similarity=0.252  Sum_probs=36.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch------hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG------KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~------~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|.-|+||.+.+.+++..+|+|.+.+...      ....-+.+.+..+.||.
T Consensus        83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPF  138 (459)
T KOG0610|consen   83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPF  138 (459)
T ss_pred             HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCc
Confidence            889999999999999998888999999976321      12223334444566664

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=91.46  E-value=0.29  Score=46.00  Aligned_cols=51  Identities=12%  Similarity=0.125  Sum_probs=38.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-----hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-----KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-----~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|.|+.|..++...++.+||+|.+.+...     +....+...+..|.|||-
T Consensus        62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnI  117 (596)
T KOG0586|consen   62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNI  117 (596)
T ss_pred             eeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcce
Confidence            789999999999999988899999999876432     223344455566777774

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=91.41  E-value=0.17  Score=48.81  Aligned_cols=51  Identities=16%  Similarity=0.165  Sum_probs=36.7

Q ss_pred             cEEcccCCceEEEEEEcC---CCeeeeeeeecccch----hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE---TNSFFSNWNVQLKHG----KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~---~~~~vavK~i~~~~~----~~~~~~~~~~~~Ir~~n~  166 (187)
                      .+||+|.||.|++|....   ....||||.+..+..    ..+..+...+.+|+|++.
T Consensus       116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hl  173 (1039)
T KOG0199|consen  116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHL  173 (1039)
T ss_pred             HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcce
Confidence            889999999999998743   223689999865433    344555666667888764

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=91.31  E-value=0.52  Score=36.75  Aligned_cols=47  Identities=13%  Similarity=0.028  Sum_probs=30.4

Q ss_pred             CCceEEEEEEcCCCeeeeeeeecccchhh-HHHHHHHHHHHhCCCCCC
Q 047282          122 GFGGVDKGFLRETNSFFSNWNVQLKHGKA-VALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       122 ~fG~Vykg~l~~~~~~vavK~i~~~~~~~-~~~~~~~~~~Ir~~n~~~  168 (187)
                      +||.||+|+..+++..+++|.+....... ......+++.+++.++++
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~   48 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPN   48 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCc
Confidence            58999999998778899999987644322 333444444444434443

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=91.30  E-value=0.21  Score=47.83  Aligned_cols=51  Identities=18%  Similarity=0.283  Sum_probs=41.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n~  166 (187)
                      ++||-|-||.||.|+.+.-...||||-+..+..  .++..+.+.+++|+|+|-
T Consensus       273 hKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNL  325 (1157)
T KOG4278|consen  273 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL  325 (1157)
T ss_pred             eccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccH
Confidence            889999999999999986556799999976542  456667778889999984

>PRK10345 hypothetical protein; Provisional

Probab=91.30  E-value=0.44  Score=38.95  Aligned_cols=45  Identities=13%  Similarity=0.042  Sum_probs=29.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc---hhhHHHHHHHHHHHhC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH---GKAVALCKGLFRDIRN  163 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~---~~~~~~~~~~~~~Ir~  163 (187)
                      .+||+|+||.||.  .+.+.. .+||++....   ......+....+.+.|
T Consensus         8 ~~LG~G~~~~Vy~--hp~~~~-k~IKv~~~~~~~~~~~~~rEi~~l~~L~~   55 (210)
T PRK10345          8 SPLGTGRHRKCYA--HPEDAQ-RCIKIVYHRGDGGDKEIRRELKYYAHLSR   55 (210)
T ss_pred             ceecCCCceEEEE--CCCCcC-eEEEEEeccccchHHHHHHHHHHHHHhhc
Confidence            6899999999996  555444 4799886542   2233444455556644

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=91.24  E-value=0.49  Score=38.98  Aligned_cols=30  Identities=17%  Similarity=0.201  Sum_probs=24.6

Q ss_pred             cEEcccCCceEEEEEEc---CCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLR---ETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~---~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++...   .++..+|+|.+..
T Consensus         6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~   38 (290)
T cd05613           6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKK   38 (290)
T ss_pred             eeeccCCcceEEEEEeccCCCCCceEEEEEeeh
Confidence            67899999999999863   2477899998854

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PRK14879 serine/threonine protein kinase; Provisional

Probab=90.72  E-value=0.56  Score=37.03  Aligned_cols=27  Identities=7%  Similarity=-0.229  Sum_probs=22.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeec
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQ  144 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~  144 (187)
                      ..||+|++|.||+|...  +..+++|...
T Consensus         2 ~~l~~G~~~~vy~~~~~--~~~~~vK~~~   28 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFL--GIKAVIKWRI   28 (211)
T ss_pred             cccccCceEEEEEEeeC--CCceEEEEeC
Confidence            46899999999999873  5678888754

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=90.64  E-value=0.32  Score=46.09  Aligned_cols=58  Identities=17%  Similarity=0.063  Sum_probs=39.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc-hhhHHHHHHHHHHHhCCCCCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTGPYGGEATG  174 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~~~~~~~~  174 (187)
                      .+||+|-||.|..+.... ...||||.+.... ......+..+++.|.+-.+++..|-.|
T Consensus       544 ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvG  602 (807)
T KOG1094|consen  544 EKIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLG  602 (807)
T ss_pred             hhhcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEe
Confidence            899999999999999864 6889999996633 223344555555444444444455444

>cd06900 lectin_VcfQ VcfQ bacterial pilus biogenesis protein, lectin domain

Probab=90.58  E-value=1.2  Score=37.69  Aligned_cols=27  Identities=22%  Similarity=0.282  Sum_probs=24.1

Q ss_pred             ccCCceeEEEEEeecCCCccccceeee
Q 047282           52 QHLPEFVTFGFSMETGVDFTIFSIYLW   78 (187)
Q Consensus        52 ~~L~~~v~VGFSasTG~~~~~h~i~sW   78 (187)
                      .-+|+..+++|++|||.....|+|-..
T Consensus       225 ~avP~~f~lS~TgSTGgstN~HEIdnf  251 (255)
T cd06900         225 DAIPENFYLSFTGSTGGSTNTHEIDNF  251 (255)
T ss_pred             CCCCccEEEEEEecCCCcccceeecce
Confidence            678999999999999999999998543

This family includes bacterial proteins homologous to the VcfQ (also known as MshQ) bacterial pilus biogenesis protein. VcfQ is encoded by the vcfQ gene of the type IV pilus gene cluster of Vibrio cholerae and is essential for type IV pilus assembly. VcfQ has a Laminin G-like domain as well as an L-type lectin domain.

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=90.46  E-value=0.72  Score=38.72  Aligned_cols=30  Identities=20%  Similarity=0.193  Sum_probs=23.3

Q ss_pred             cEEcccCCceEEEEEEc-------CCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLR-------ETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~-------~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||++...       .....+|+|.+..
T Consensus        18 ~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~   54 (314)
T cd05099          18 KPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKD   54 (314)
T ss_pred             eeecCCCcccEEEeeecccCCccCCcceEEEEEecCC
Confidence            88999999999998742       2244689998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=90.18  E-value=0.54  Score=36.81  Aligned_cols=26  Identities=8%  Similarity=-0.192  Sum_probs=21.4

Q ss_pred             EEcccCCceEEEEEEcCCCeeeeeeeec
Q 047282          117 KLGQGGFGGVDKGFLRETNSFFSNWNVQ  144 (187)
Q Consensus       117 ~iG~G~fG~Vykg~l~~~~~~vavK~i~  144 (187)
                      .||+|+||.||+|...  +..+++|...
T Consensus         1 ~ig~G~~~~vy~~~~~--~~~~viK~~~   26 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL--GLKAVIKERV   26 (199)
T ss_pred             CCCCCceEEEEEeecC--CccEEEEEec
Confidence            4799999999999853  5778998854

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=89.78  E-value=0.28  Score=46.93  Aligned_cols=51  Identities=18%  Similarity=0.148  Sum_probs=40.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc------hhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH------GKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~------~~~~~~~~~~~~~Ir~~n~  166 (187)
                      .-||.|+-|.|-.|+...+|+.+|||.+.+..      ......+...++.|+|||+
T Consensus        18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnV   74 (786)
T KOG0588|consen   18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNV   74 (786)
T ss_pred             ccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCe
Confidence            66899999999999998999999999986531      2344556667778999986

>PHA03210 serine/threonine kinase US3; Provisional

Probab=89.73  E-value=0.33  Score=44.43  Aligned_cols=18  Identities=33%  Similarity=0.433  Sum_probs=15.6

Q ss_pred             cEEcccCCceEEEEEEcC
Q 047282          116 GKLGQGGFGGVDKGFLRE  133 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~  133 (187)
                      ..||+|+||.||++..+.
T Consensus       154 ~~LG~G~fG~Vyl~~~~~  171 (501)
T PHA03210        154 DDLPAGAFGKIFICALRA  171 (501)
T ss_pred             eEecCCCCcceEEEEEec
Confidence            789999999999987643

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=89.12  E-value=0.22  Score=47.12  Aligned_cols=52  Identities=23%  Similarity=0.142  Sum_probs=39.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCCCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPYGGEATGSN  176 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~~~~~~~~~  176 (187)
                      ..||.|.-|.||.|++.  +..||||++...       .+.+++.|||..|.+-++.-|+=
T Consensus       130 eWlGSGaQGAVF~Grl~--netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVC  181 (904)
T KOG4721|consen  130 EWLGSGAQGAVFLGRLH--NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVC  181 (904)
T ss_pred             hhhccCcccceeeeecc--CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeee
Confidence            78999999999999997  478999998642       23456667777777766666653

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=89.04  E-value=0.95  Score=37.21  Aligned_cols=30  Identities=17%  Similarity=0.192  Sum_probs=24.0

Q ss_pred             cEEcccCCceEEEEEEc---CCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLR---ETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~---~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++...   .++..+|+|.+..
T Consensus         6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~   38 (288)
T cd05583           6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKK   38 (288)
T ss_pred             EEeccCCCceEEEEEEeccccCCcEEEEEEEeh
Confidence            67999999999998853   2456799998854

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=88.85  E-value=0.35  Score=47.11  Aligned_cols=51  Identities=18%  Similarity=0.197  Sum_probs=34.9

Q ss_pred             cEEcccCCceEEEEEEcCCC---eeeeeeeeccc-chhhHHHH---HHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETN---SFFSNWNVQLK-HGKAVALC---KGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~---~~vavK~i~~~-~~~~~~~~---~~~~~~Ir~~n~  166 (187)
                      .+||.|-||.||+|.++-.+   ..||||-+..- .+++...|   ...+.+-.|||.
T Consensus       635 ~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNI  692 (996)
T KOG0196|consen  635 KVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNI  692 (996)
T ss_pred             EEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcE
Confidence            88999999999999996433   47999998642 23343334   444445566653

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=88.82  E-value=0.04  Score=47.10  Aligned_cols=50  Identities=20%  Similarity=0.301  Sum_probs=37.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc----c-hhhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK----H-GKAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~----~-~~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|.|..||++....+|+.+|+|.++.+    + -+...++...++.|+|||
T Consensus        17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~   71 (355)
T KOG0033|consen   17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN   71 (355)
T ss_pred             HHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCc
Confidence            6799999999999988888999999987542    1 223344455667788876

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=88.45  E-value=0.43  Score=43.36  Aligned_cols=57  Identities=12%  Similarity=0.098  Sum_probs=39.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPTGPYGGEA  172 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n~~~~~~~  172 (187)
                      .++|+|+||.++..+.+.+...+++|+|....  +........++.-|.+-.|+|..|.
T Consensus        10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y   68 (426)
T KOG0589|consen   10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEY   68 (426)
T ss_pred             hhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeee
Confidence            68999999999987777777889999986543  2233344555555666666665543

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=87.68  E-value=0.38  Score=43.94  Aligned_cols=32  Identities=16%  Similarity=0.325  Sum_probs=28.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH  147 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~  147 (187)
                      ..||+|.||.|-++.....|.+||||.|.++.
T Consensus        59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdk   90 (668)
T KOG0611|consen   59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDK   90 (668)
T ss_pred             HHhcCCcccceeehhhccCCcEeehhhhhhhh
Confidence            77899999999999886679999999997654

>KOG3839 consensus Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans [Intracellular trafficking, secretion, and vesicular transport]

Probab=87.48  E-value=1.3  Score=38.98  Aligned_cols=67  Identities=19%  Similarity=0.088  Sum_probs=44.5

Q ss_pred             ccCCCce-EEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCC-ccCCceeEEEEEeecCCCccccceeeeee
Q 047282            7 DVKSGRR-NEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLR-QHLPEFVTFGFSMETGVDFTIFSIYLWEF   80 (187)
Q Consensus         7 ~l~~G~~-~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs-~~L~~~v~VGFSasTG~~~~~h~i~sW~F   80 (187)
                      .++|... ..+-|.|+.  +.|++.....+   |..  ...-.++. -.||.-=|+|+||+||...+.|+|.+-.+
T Consensus       204 ~~rn~~~dt~~~iry~~--~~l~~~~dl~~---~~~--~~~c~~~n~v~lp~g~~fg~SasTGdlSd~HdivS~kl  272 (351)
T KOG3839|consen  204 NFRNLPHDTLVVIRYEK--KTLSISIDLEG---PNE--WIDCFSLNNVELPLGYFFGVSASTGDLSDSHDIVSLKL  272 (351)
T ss_pred             eeccCCCcceeEEEecC--CceEEEEecCC---Cce--eeeeeeecceecccceEEeeeeccCccchhhHHHHhhh
Confidence            3444443 367889987  66777666543   222  23334443 34566788999999999999999988643

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=87.36  E-value=0.37  Score=48.50  Aligned_cols=30  Identities=20%  Similarity=0.282  Sum_probs=28.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      .+||+|+||.|...+++.++..+|.|++++
T Consensus        81 KvIGrGaFGEV~lVr~k~t~~VYAMK~lnK  110 (1317)
T KOG0612|consen   81 KVIGRGAFGEVALVRHKSTEKVYAMKILNK  110 (1317)
T ss_pred             HHhcccccceeEEEEeeccccchhHHHhhH
Confidence            889999999999999999899999999976

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=86.83  E-value=0.35  Score=41.14  Aligned_cols=47  Identities=17%  Similarity=0.191  Sum_probs=37.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHh
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIR  162 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir  162 (187)
                      +++|+|.++.||.|....++..++||.+..-+.+..+.+...++.|+
T Consensus        44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~   90 (338)
T KOG0668|consen   44 RKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLR   90 (338)
T ss_pred             HHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhcc
Confidence            88999999999999866667788899888766666666666666665

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=85.56  E-value=0.65  Score=41.69  Aligned_cols=48  Identities=25%  Similarity=0.302  Sum_probs=37.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc--cchhhHHHHHHHHHHHhC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL--KHGKAVALCKGLFRDIRN  163 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~--~~~~~~~~~~~~~~~Ir~  163 (187)
                      ..+|+|.||.|.++.....+..+|+|.+..  ..+.+...+....++|.+
T Consensus        95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~  144 (415)
T KOG0671|consen   95 DLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINE  144 (415)
T ss_pred             hhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence            789999999999999888788999998854  334455666667777743

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=85.12  E-value=1.2  Score=38.14  Aligned_cols=47  Identities=17%  Similarity=0.293  Sum_probs=30.7

Q ss_pred             cEEcccCCceEEEEEEcCCC-eeeeeeeecccchh---hHHHHHHHHHHHh
Q 047282          116 GKLGQGGFGGVDKGFLRETN-SFFSNWNVQLKHGK---AVALCKGLFRDIR  162 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~-~~vavK~i~~~~~~---~~~~~~~~~~~Ir  162 (187)
                      ..||+|+||.||.+.....+ ..+|+|........   ..+.+......+.
T Consensus        24 ~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~   74 (322)
T KOG1164|consen   24 KKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLE   74 (322)
T ss_pred             eeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHh
Confidence            78999999999999976543 46788776543221   3344444444554

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=83.66  E-value=2.7  Score=30.05  Aligned_cols=47  Identities=6%  Similarity=-0.180  Sum_probs=33.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-hhHHHHHHHHHHHhCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-KAVALCKGLFRDIRNP  164 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-~~~~~~~~~~~~Ir~~  164 (187)
                      ..||+|.++.||++...+  ..+++|....... .....+....+.+++.
T Consensus         4 ~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~   51 (155)
T cd05120           4 KLLKGGLTNRVYLLGTKD--EDYVLKINPSREKGADREREVAILQLLARK   51 (155)
T ss_pred             eecccccccceEEEEecC--CeEEEEecCCCCchhHHHHHHHHHHHHHHc
Confidence            578999999999999854  5789998855332 2344555566677664

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=83.61  E-value=1.4  Score=42.46  Aligned_cols=50  Identities=18%  Similarity=0.310  Sum_probs=32.6

Q ss_pred             cEEcccCCceEEEEEEcC----CCeeeeeeeecccc----hhhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE----TNSFFSNWNVQLKH----GKAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~----~~~~vavK~i~~~~----~~~~~~~~~~~~~Ir~~n  165 (187)
                      .+||.|-||.||+|+..+    ....||||.-..+.    ...+..+.-.++..+||+
T Consensus       395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHph  452 (974)
T KOG4257|consen  395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPH  452 (974)
T ss_pred             HhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcc
Confidence            889999999999998632    34468888775532    223333344455566665

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=82.45  E-value=1.9  Score=37.60  Aligned_cols=31  Identities=29%  Similarity=0.341  Sum_probs=28.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||.|.+|.|.|.+.+.++...|||.+...
T Consensus        98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt  128 (391)
T KOG0983|consen   98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT  128 (391)
T ss_pred             HhhcCCCccceEEEEEcccceEEEEEeeccc
Confidence            6799999999999999988999999999653

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=82.28  E-value=0.39  Score=46.13  Aligned_cols=46  Identities=24%  Similarity=0.284  Sum_probs=33.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHH
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDI  161 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~I  161 (187)
                      ..||-|.||.|||+.-++++...|.|.|....+.+...+.-++.-|
T Consensus        38 GELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeIL   83 (1187)
T KOG0579|consen   38 GELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEIL   83 (1187)
T ss_pred             hhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhh
Confidence            5679999999999999887777788988766555544444444433

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=80.87  E-value=3.1  Score=38.39  Aligned_cols=18  Identities=22%  Similarity=0.329  Sum_probs=16.4

Q ss_pred             cEEcccCCceEEEEEEcC
Q 047282          116 GKLGQGGFGGVDKGFLRE  133 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~  133 (187)
                      ++||+|+||.||+|....
T Consensus       339 ~~iG~G~~g~Vy~~~~~~  356 (535)
T PRK09605        339 HLIGKGAEADIKKGEYLG  356 (535)
T ss_pred             ceeccCCcEEEEEEeecC
Confidence            889999999999998865

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=80.35  E-value=5.6  Score=34.34  Aligned_cols=37  Identities=30%  Similarity=0.184  Sum_probs=31.1

Q ss_pred             eeEEEEEeccCCcEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          104 ITALVVRLSLGGGKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       104 ~~~l~i~~~~~~~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      .+.|+.+     ..||.|+|+.||.++..++++++|+|....
T Consensus        11 ~r~l~~~-----~~i~~g~~~~v~~v~d~~t~~~~avkvf~~   47 (288)
T PF14531_consen   11 PRTLVRG-----RIIGKGGFSIVFEVTDVETGEEFAVKVFLL   47 (288)
T ss_dssp             EEEEEEE-----EEEEEETTEEEEEEEETTTTEEEEEEEEEE
T ss_pred             ceEEEEc-----cccccCCceEEEEEEEccCCceEEEEEEec
Confidence            3445555     889999999999999999999999998754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	187
1mvq_A	236	Cratylia Mollis Lectin (Isoform 1) In Complex With		2e-05
3rrd_A	237	Native Structure Of Dioclea Virgata Lectin Length =		3e-05
1h9w_A	237	Native Dioclea Guianensis Seed Lectin Length = 237		3e-05
1h9p_A	237	Crystal Structure Of Dioclea Guianensis Seed Lectin		3e-05
3u4x_A	236	Crystal Structure Of A Lectin From Camptosema Pedic		3e-05
1hql_A	257	The Xenograft Antigen In Complex With The B4 Isolec		5e-05
1gnz_A	257	Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)m		6e-05
2jdz_A	239	Crystal Structure Of Recombinant Dioclea Guianensis		6e-05
2je7_A	239	Crystal Structure Of Recombinant Dioclea Guianensis		6e-05
1n3o_A	252	Pterocarcpus Angolensis Lectin In Complex With Alph		7e-05
1q8o_A	252	Pterocartpus Angolensis Lectin Pal In Complex With		7e-05
1qmo_E	133	Structure Of Fril, A Legume Lectin That Delays Hema		7e-05
2bqp_A	234	The Structure Of The Pea Lectin-D-Glucopyranose Com		8e-05
2d3p_A	236	Cratylia Floribunda Seed Lectin Crystallized At Bas		9e-05
2zbj_A	237	Crystal Structure Of Dioclea Rostrata Lectin Length		9e-05
1bjq_A	253	The Dolichos Biflorus Seed Lectin In Complex With A		1e-04
3a0k_A	237	Crystal Structure Of An Antiflamatory Legume Lectin		2e-04
1lul_A	253	Db58, A Legume Lectin From Dolichos Biflorus Length		2e-04
2jec_A	239	Crystal Structure Of Recombinant Dioclea Grandiflor		2e-04
1dgl_A	237	Lectin From Dioclea Grandiflora Complexed To Triman		3e-04
2je9_A	239	Crystal Structure Of Recombinant Dioclea Grandiflor		3e-04
3sh3_A	237	Crystal Structure Of A Pro-Inflammatory Lectin From		3e-04
2gdf_A	237	Crystal Structure Of Dioclea Violacea Seed Lectin L		3e-04
2fmd_A	240	Structural Basis Of Carbohydrate Recognition By Bow		3e-04

>pdb|1MVQ|A Chain A, Cratylia Mollis Lectin (Isoform 1) In Complex With Methyl-Alpha-D- Mannose Length = 236

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 5   RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
           R DV++G+   A ISYNS    LS  V++ G  + +V      Y VDL   LPE+V  G 
Sbjct: 39  RWDVQNGKVGTAHISYNSVAKRLSAVVSYPGGSSATV-----SYDVDLNNILPEWVRVGL 93
Query: 63  SMETGVDFTIFSIYLWEFNSSLE 85
           S  TG+     +I  W F S L+
Sbjct: 94  SASTGLYKETNTILSWSFTSKLK 116

>pdb|3RRD|A Chain A, Native Structure Of Dioclea Virgata Lectin Length = 237

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 5   RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
           R ++++G+   A ISYNS    LS  V++TG  + +V      Y VDL   LPE+V  G 
Sbjct: 39  RWNMQTGKVGTAHISYNSVAKRLSAVVSYTGSSSTTV-----SYDVDLNNVLPEWVRVGL 93
Query: 63  SMETGVDFTIFSIYLWEFNSSLE 85
           S  TG+     +I  W F S L+
Sbjct: 94  SATTGLYKETNTILSWSFTSKLK 116

>pdb|1H9W|A Chain A, Native Dioclea Guianensis Seed Lectin Length = 237

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 5   RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
           R ++++G+   A ISYNS    LS  V++TG  + +V      Y VDL   LPE+V  G 
Sbjct: 39  RWNMQTGKVGTAHISYNSVAKRLSAVVSYTGSSSTTV-----SYDVDLNNVLPEWVRVGL 93
Query: 63  SMETGVDFTIFSIYLWEFNSSLE 85
           S  TG+     +I  W F S L+
Sbjct: 94  SATTGLYKETNTILSWSFTSKLK 116

>pdb|1H9P|A Chain A, Crystal Structure Of Dioclea Guianensis Seed Lectin Length = 237

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 5   RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
           R ++++G+   A ISYNS    LS  V++TG  + +V      Y VDL   LPE+V  G 
Sbjct: 39  RWNMQTGKVGTAHISYNSVAKRLSAVVSYTGSSSTTV-----SYDVDLNNVLPEWVRVGL 93
Query: 63  SMETGVDFTIFSIYLWEFNSSLE 85
           S  TG+     +I  W F S L+
Sbjct: 94  SATTGLYKETNTILSWSFTSKLK 116

>pdb|3U4X|A Chain A, Crystal Structure Of A Lectin From Camptosema Pedicellatum Seeds In Complex With 5-Bromo-4-Chloro-3-Indolyl-Alpha-D-Mannose Length = 236

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 5   RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
           R +V+ G+   A ISYNS    LS  V++ G  + +V      Y VDL   LPE+V  G 
Sbjct: 39  RWNVQDGKVGTAHISYNSVAKRLSAIVSYPGGSSATV-----SYDVDLNNILPEWVRVGL 93
Query: 63  SMETGVDFTIFSIYLWEFNSSLE 85
           S  TGV     +I  W F S L+
Sbjct: 94  SASTGVYKETNTILSWSFTSKLK 116

>pdb|1HQL|A Chain A, The Xenograft Antigen In Complex With The B4 Isolectin Of Griffonia Simplicifolia Lectin-1 Length = 257

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 6   SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSME 65
           SD+ SG+   A ISY+ S   L+V  +    +  +   L + VD+RQ+LPE V  G S  
Sbjct: 163 SDIFSGKIATARISYDGSAEILTVVLSYPDGSDYI---LSHSVDMRQNLPESVRVGISAS 219
Query: 66  TGVD-FTIFSIYLWEFNSSLE 85
           TG + F    I  W F+S+L+
Sbjct: 220 TGNNQFLTVYILSWRFSSNLQ 240

>pdb|1GNZ|A Chain A, Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)metal Free Form Length = 257

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 6   SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSME 65
           SD+ SG+   A ISY+ S   L+V  +    +  +   L + VD+RQ+LPE V  G S  
Sbjct: 163 SDIFSGKIATARISYDGSAEILTVVLSYPDGSDYI---LSHSVDMRQNLPESVRVGISAS 219
Query: 66  TGVD-FTIFSIYLWEFNSSLE 85
           TG + F    I  W F+S+L+
Sbjct: 220 TGNNQFLTVYILSWRFSSNLQ 240

>pdb|2JDZ|A Chain A, Crystal Structure Of Recombinant Dioclea Guianensis Lectin Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose Length = 239

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 5   RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
           R ++++G+   A ISYNS    LS  V+++G  + +V      Y VDL   LPE+V  G 
Sbjct: 41  RWNMQTGKVGTAHISYNSVAKRLSAVVSYSGTSSTTV-----SYDVDLNNVLPEWVRVGL 95
Query: 63  SMETGVDFTIFSIYLWEFNSSLE 85
           S  TG+     +I  W F S L+
Sbjct: 96  SATTGLYKETNTILSWSFTSKLK 118

>pdb|2JE7|A Chain A, Crystal Structure Of Recombinant Dioclea Guianensis Lectin S131h Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose Length = 239

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 5   RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
           R ++++G+   A ISYNS    LS  V+++G  + +V      Y VDL   LPE+V  G 
Sbjct: 41  RWNMQTGKVGTAHISYNSVAKRLSAVVSYSGTSSTTV-----SYDVDLNNVLPEWVRVGL 95
Query: 63  SMETGVDFTIFSIYLWEFNSSLE 85
           S  TG+     +I  W F S L+
Sbjct: 96  SATTGLYKETNTILSWSFTSKLK 118

>pdb|1N3O|A Chain A, Pterocarcpus Angolensis Lectin In Complex With Alpha-Methyl Glucose Length = 252

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 4   LRSDVKSGRRNEAWISYNSSTHNLSVAFT---GFRNNSVVMQGLDYQVDLRQHLPEFVTF 60
           ++ D + G+     +++N ST NL V  T   G R        + Y+VD+R  LPE+V  
Sbjct: 160 VKWDRRDGQSLNVLVTFNPSTRNLDVVATYSDGTRYE------VSYEVDVRSVLPEWVRV 213
Query: 61  GFSMETGVDFTIFSIYLWEFNSSL 84
           GFS  +G  +   ++  W F S+L
Sbjct: 214 GFSAASGEQYQTHTLESWSFTSTL 237

>pdb|1Q8O|A Chain A, Pterocartpus Angolensis Lectin Pal In Complex With The Dimmanoside Man(Alpha1-2)man Length = 252

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 4   LRSDVKSGRRNEAWISYNSSTHNLSVAFT---GFRNNSVVMQGLDYQVDLRQHLPEFVTF 60
           ++ D + G+     +++N ST NL V  T   G R        + Y+VD+R  LPE+V  
Sbjct: 160 VKWDRRDGQSLNVLVTFNPSTRNLDVVATYSDGTRYE------VSYEVDVRSVLPEWVRV 213
Query: 61  GFSMETGVDFTIFSIYLWEFNSSL 84
           GFS  +G  +   ++  W F S+L
Sbjct: 214 GFSAASGEQYQTHTLESWSFTSTL 237

>pdb|1QMO|E Chain E, Structure Of Fril, A Legume Lectin That Delays Hematopoietic Progenitor Maturation Length = 133

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 7   DVKSGRRNEAWISYNSSTHNLSVA--FTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSM 64
           D ++G+   A ISYNS +  LSV   + G +  +     L Y ++L   LPE+V  G S 
Sbjct: 40  DWQNGKIATAHISYNSVSKRLSVTSYYAGSKPAT-----LSYDIELHTVLPEWVRVGLSA 94
Query: 65  ETGVDFTIFSIYLWEFNSSL 84
            TG D    +++ W F SSL
Sbjct: 95  STGQDKERNTVHSWSFTSSL 114

>pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex Length = 234

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 8   VKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQ----VDLRQHLPEFVTFGFS 63
           +++G      I++N++T+ L+V+ T + NNS+  +   Y     V L+  +PE+V  GFS
Sbjct: 154 LQNGEEANVVIAFNAATNVLTVSLT-YPNNSLEEEVTSYTLSDVVSLKDVVPEWVRIGFS 212
Query: 64  METGVDFTIFSIYLWEFNSSL 84
             TG ++    +  W F+S L
Sbjct: 213 ATTGAEYAAHEVLSWSFHSEL 233

>pdb|2D3P|A Chain A, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph Length = 236

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 5   RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
           R +V+ G+   A ISYNS    LS  V++ G  + +V      Y VDL   LPE+V  G 
Sbjct: 39  RWNVQDGKVGTAHISYNSVAKRLSAIVSYPGGSSATV-----SYDVDLNNILPEWVRVGL 93
Query: 63  SMETGVDFTIFSIYLWEFNSSLE 85
           S  TG+     +I  W F S L+
Sbjct: 94  SASTGLYKETNTILSWSFTSKLK 116

>pdb|2ZBJ|A Chain A, Crystal Structure Of Dioclea Rostrata Lectin Length = 237

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 5   RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
           R ++++G+     ISYNS    LS  V++TG  + +V      Y VDL   LPE+V  G 
Sbjct: 39  RWNMQTGKVGTVHISYNSVAKRLSAVVSYTGSSSTTV-----SYDVDLNNVLPEWVRVGL 93
Query: 63  SMETGVDFTIFSIYLWEFNSSLE 85
           S  TG+     +I  W F S L+
Sbjct: 94  SATTGLYKETNTILSWSFTSKLK 116

>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine Length = 253

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFT-GFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSME 65
           D+ +G   E  I+YN++T  L  +     R  S +   L  +VD+   LPE+V+ GFS  
Sbjct: 155 DLANGENAEILITYNAATSLLVASLVHPSRRTSYI---LSERVDITNELPEYVSVGFSAT 211
Query: 66  TGVD---FTIFSIYLWEFNSSLEMDDETTNPVSNPKRRRKNI 104
           TG+         +  W F S L  DD T  P+       +N+
Sbjct: 212 TGLSEGYIETHDVLSWSFASKLP-DDSTAEPLDLASYLVRNV 252

>pdb|3A0K|A Chain A, Crystal Structure Of An Antiflamatory Legume Lectin From Cymbosema Roseum Seeds Length = 237

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 5   RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
           R ++++G+   A ISYNS    L+  V+++G  + +V      Y VDL   LPE+V  G 
Sbjct: 39  RWNMQTGKVGTAHISYNSVAKRLTAVVSYSGSSSTTV-----SYDVDLTNVLPEWVRVGL 93
Query: 63  SMETGVDFTIFSIYLWEFNSSLE 85
           S  TG+     +I  W F S L+
Sbjct: 94  SATTGLYKETNTILSWSFTSKLK 116

>pdb|1LUL|A Chain A, Db58, A Legume Lectin From Dolichos Biflorus Length = 253

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 8   VKSGRRNEAWISYNSSTHNL--SVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSME 65
           + +G+  E  I+YN++T  L  S+     R + +V +    +VD+   LPE+V+ GFS  
Sbjct: 156 LANGQNAEILITYNAATSLLVASLVHPSRRTSYIVSE----RVDITNELPEYVSIGFSAT 211
Query: 66  TGVD--FT-IFSIYLWEFNSSLEMDDETTNPVSNPKRRRKNI 104
           TG+   +T    +  W F S L  DD TT P+       +N+
Sbjct: 212 TGLSEGYTETHDVLSWSFASKLP-DDSTTEPLDIASYLVRNV 252

>pdb|2JEC|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora Lectin Mutant E123a-H131n-K132q Complexed With 5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose Length = 239

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 5   RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
           R ++++G+     ISYNS    LS  V+++G  + +V      Y VDL   LPE+V  G 
Sbjct: 41  RWNMQTGKVGTVHISYNSVAKRLSAVVSYSGSSSTTV-----SYDVDLNNVLPEWVRVGL 95
Query: 63  SMETGVDFTIFSIYLWEFNSSLE 85
           S  TG+     +I  W F S L+
Sbjct: 96  SATTGLYKETNTILSWSFTSKLK 118

>pdb|1DGL|A Chain A, Lectin From Dioclea Grandiflora Complexed To Trimannoside Length = 237

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 5   RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
           R ++++G+     ISYNS    LS  V+++G  + +V      Y VDL   LPE+V  G 
Sbjct: 39  RWNMQTGKVGTVHISYNSVAKRLSAVVSYSGSSSTTV-----SYDVDLNNVLPEWVRVGL 93
Query: 63  SMETGVDFTIFSIYLWEFNSSLE 85
           S  TG+     +I  W F S L+
Sbjct: 94  SATTGLYKETNTILSWSFTSKLK 116

>pdb|2JE9|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora Lectin Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose Length = 239

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 5   RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
           R ++++G+     ISYNS    LS  V+++G  + +V      Y VDL   LPE+V  G 
Sbjct: 41  RWNMQTGKVGTVHISYNSVAKRLSAVVSYSGSSSTTV-----SYDVDLNNVLPEWVRVGL 95
Query: 63  SMETGVDFTIFSIYLWEFNSSLE 85
           S  TG+     +I  W F S L+
Sbjct: 96  SATTGLYKETNTILSWSFTSKLK 118

>pdb|3SH3|A Chain A, Crystal Structure Of A Pro-Inflammatory Lectin From The Seeds Of Dioclea Wilsonii Standl Length = 237

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 5   RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
           R ++++G+     ISYNS    LS  V+++G  + +V      Y VDL   LPE+V  G 
Sbjct: 39  RWNMQTGKVGTVHISYNSVAKRLSAVVSYSGSSSTTV-----SYDVDLNNVLPEWVRVGL 93
Query: 63  SMETGVDFTIFSIYLWEFNSSLE 85
           S  TG+     +I  W F S L+
Sbjct: 94  SATTGLYKETNTILSWSFTSKLK 116

>pdb|2GDF|A Chain A, Crystal Structure Of Dioclea Violacea Seed Lectin Length = 237

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 5   RSDVKSGRRNEAWISYNSSTHNLS--VAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGF 62
           R ++++G+     ISYNS    LS  V+++G  + +V      Y VDL   LPE+V  G 
Sbjct: 39  RWNMQTGKVGTVHISYNSVAKRLSAVVSYSGSSSTTV-----SYDVDLNNVLPEWVRVGL 93
Query: 63  SMETGVDFTIFSIYLWEFNSSLE 85
           S  TG+     +I  W F S L+
Sbjct: 94  SATTGLYKETNTILSWSFTSKLK 116

>pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia Milbraedii Seed Agglutinin Length = 240

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           D ++G+   A ISYNS++  LSV  + + N+S V+  + + V+L    P +V  GFS  T
Sbjct: 160 DWQNGKTATAHISYNSASKRLSVV-SSYPNSSPVV--VSFDVELNNVXPXWVRVGFSATT 216
Query: 67  GVDFTIFSIYLWEFNSSL 84
           G      +I  W F SSL
Sbjct: 217 GQYTQTNNILAWSFRSSL 234

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	187
1qmo_E	133	Mannose binding lectin, FRIL; crosslink, hematopoi	2e-13
2fmd_A	240	Lectin, agglutinin, BMA; legume lectin, beta sandw	8e-12
3zyr_A	261	Lectin; sugar binding protein, N-glycan; HET: NAG	1e-11
1dhk_B	223	Bean lectin-like inhibitor, porcine pancreatic alp	1e-11
1avb_A	226	Arcelin-1; lectin-like glycoprotein, plant defense	2e-11
1v6i_A	232	Agglutinin, PNA, galactose-binding lectin; open qu	1e-10
1gzc_A	239	Erythrina crista-galli lectin; carbohydrate, sugar	2e-10
1fat_A	252	Phytohemagglutinin-L; glycoprotein, plant defense	2e-10
1wbf_A	242	Protein (agglutinin); lectin (agglutinin), legume	5e-10
3ipv_A	251	Lectin alpha chain; galactose binding, SEED lectin	5e-10
1n47_A	233	Isolectin B4; cancer antigen, vicia villosa lectin	6e-10
1g7y_A	253	Stem/LEAF lectin DB58; jelly roll fold, sugar bind	7e-10
1ioa_A	240	Arcelin-5A, ARC5A; lectin-like proteins, plant def	7e-10
2ltn_B	52	PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP	9e-10
1qnw_A	242	Chitin binding lectin, UEA-II; carbohydrate bindin	1e-09
1fny_A	237	BARK lectin, BARK agglutinin I,polypeptide A; legu	1e-09
1hql_A	257	Lectin; xenograft antigen, sugar BI protein; HET:	2e-09
2bqp_A	234	Protein (PEA lectin); D-glucopyranose complex, sug	2e-09
2eig_A	234	Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin	2e-09
1gsl_A	243	Griffonia simplicifolia lectin 4; glycoprotein, ma	3e-09
1dbn_A	239	MAL, protein (leukoagglutinin); plant lectin, carb	7e-09
1fx5_A	242	UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO	9e-09
1sbf_A	253	Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G	1e-08
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	2e-08
1f9k_A	238	Acidic lectin; legume lectin, glycosylated protein	3e-08

>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1 Length = 133

 Score = 63.2 bits (153), Expect = 2e-13
 Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 9/101 (8%)

Query: 9   KSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGV 68
           ++G+   A ISYNS +  LSV      +       L Y ++L   LPE+V  G S  TG 
Sbjct: 42  QNGKIATAHISYNSVSKRLSVTSYYAGSKPAT---LSYDIELHTVLPEWVRVGLSASTGQ 98

Query: 69  DFTIFSIYLWEFNSSLEMDDETTNPVSNPKRRRKNITALVV 109
           D    +++ W F SSL         V+  +   K IT  V+
Sbjct: 99  DKERNTVHSWSFTSSLW------TNVAKKENENKYITRGVL 133

>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii} Length = 240

 Score = 61.0 bits (147), Expect = 8e-12
 Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 3/79 (3%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           D ++G+   A ISYNS++  LSV  +   ++ VV   + + V+L    P++V  GFS  T
Sbjct: 160 DWQNGKTATAHISYNSASKRLSVVSSYPNSSPVV---VSFDVELNNVBPBWVRVGFSATT 216

Query: 67  GVDFTIFSIYLWEFNSSLE 85
           G      +I  W F SSL 
Sbjct: 217 GQYTQTNNILAWSFRSSLM 235

>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ... Length = 261

 Score = 60.6 bits (146), Expect = 1e-11
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           + + G+     ++YN ST  + V  T           L + VDL   LPE+V  GFS  +
Sbjct: 172 ERREGKTLNVLVTYNPSTRTIDVVATYPDGQRYQ---LSHVVDLTTILPEWVRVGFSAAS 228

Query: 67  GVDFTIFSIYLWEFNSSLEMDDETTNP 93
           G  F   ++  W F S+L    +  + 
Sbjct: 229 GEQFQTHNLESWSFTSTLLYTAQKEDE 255

>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B* Length = 223

 Score = 60.1 bits (145), Expect = 1e-11
 Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 5/94 (5%)

Query: 6   SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSME 65
                G+  E  I+YNSST   SV+ +           +   V+L + + ++V+ GFS  
Sbjct: 125 VHDYDGQNAEVRITYNSSTKVFSVSLSNPSTGK--SNNVSTTVELEKEVYDWVSVGFSAT 182

Query: 66  TGV---DFTIFSIYLWEFNSSLEMDDETTNPVSN 96
           +G     +    +  W F+S      +  +  SN
Sbjct: 183 SGAYQWSYETHDVLSWSFSSKFINLKDQKSERSN 216

>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 226

 Score = 59.4 bits (143), Expect = 2e-11
 Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 5/79 (6%)

Query: 9   KSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGV 68
            +G + E  I+Y+S  ++L V+      +S     +   V L + + ++V+ GFS  +G 
Sbjct: 149 NNGEKAEVRITYDSPKNDLRVSLLY--PSSEEKCHVSATVPLEKEVEDWVSVGFSATSGS 206

Query: 69  DFTIFS---IYLWEFNSSL 84
                    +  W F+S+ 
Sbjct: 207 KKETTETHNVLSWSFSSNF 225

>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ... Length = 232

 Score = 57.4 bits (138), Expect = 1e-10
 Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           +  SG   +  + Y+SST  LSVA T    +      +   VDL+  LPE V FGFS   
Sbjct: 154 NSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDITT---IAQVVDLKAKLPERVKFGFSASG 210

Query: 67  GVDFT-IFSIYLWEFNSSLE 85
            +    I  I  W F S+L 
Sbjct: 211 SLGGRQIHLIRSWSFTSTLI 230

>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A* Length = 239

 Score = 56.7 bits (136), Expect = 2e-10
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 5/81 (6%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
            + +G+     I Y++ +  L V       +S  +  +   VD++Q LP++V  G S  T
Sbjct: 159 QLDNGQVANVVIKYDAPSKILHVVLVY--PSSGAIYTIAEIVDVKQVLPDWVDVGLSGAT 216

Query: 67  GVDFTIFS---IYLWEFNSSL 84
           G          +Y W F +SL
Sbjct: 217 GAQRDAAETHDVYSWSFQASL 237

>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A* Length = 252

 Score = 56.7 bits (136), Expect = 2e-10
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 7/93 (7%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           D  +G   E  I+Y+SST+ L  +       +     +   VDL+  LPE+V+ GFS  T
Sbjct: 154 DFVNGENAEVLITYDSSTNLLVASLVYPSQKT--SFIVSDTVDLKSVLPEWVSVGFSATT 211

Query: 67  GVDFTIFS---IYLWEFNSSLEMDDETTNPVSN 96
           G++        +  W F S L   DETT+   N
Sbjct: 212 GINKGNVETNDVLSWSFASKL--SDETTSEGLN 242

>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A* Length = 242

 Score = 55.9 bits (134), Expect = 5e-10
 Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 9/90 (10%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
            + +G      I Y++ST  L V        +  +  +   VDL+Q LPE V  GFS  T
Sbjct: 154 TLDNGGIANVVIKYDASTKILHVVLVFPSLGT--IYTIADIVDLKQVLPESVNVGFSAAT 211

Query: 67  GVDFTIFS-------IYLWEFNSSLEMDDE 89
           G              I  W F++SL   +E
Sbjct: 212 GDPSGKQRNATETHDILSWSFSASLPGTNE 241

>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A* Length = 251

 Score = 55.9 bits (134), Expect = 5e-10
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 5/82 (6%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
            + +G   +  I+YNS+   L  +      +S     L   VDL   LPE+V  GFS  T
Sbjct: 159 SLANGEAAKVLITYNSAVKLLVASLVY--PSSKTSFILADIVDLSSVLPEWVRVGFSAAT 216

Query: 67  GVDFTIFS---IYLWEFNSSLE 85
           G          ++ W F S L 
Sbjct: 217 GASGGKIETHDVFSWSFASKLA 238

>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1 Length = 233

 Score = 55.5 bits (133), Expect = 6e-10
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           D+  G +    I+Y +ST  L+ +       S     +  +VDLR  LPE+V  GFS  T
Sbjct: 154 DMVYGEKANIVITYQASTKALAASLVF--PVSQTSYAVSARVDLRDILPEYVRVGFSATT 211

Query: 67  GVDFTIFS---IYLWEFNSSL 84
           G++  +     I  W F  SL
Sbjct: 212 GLNAGVVETHDIVSWSFAVSL 232

>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A* Length = 253

 Score = 55.6 bits (133), Expect = 7e-10
 Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 6/89 (6%)

Query: 9   KSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGV 68
            +G+  E  I+YN++T  L  +       +     +  +VD+   LPE+V+ GFS  TG+
Sbjct: 157 ANGQNAEILITYNAATSLLVASLVHPSRRT--SYIVSERVDITNELPEYVSIGFSATTGL 214

Query: 69  DFTIFS---IYLWEFNSSLEMDDETTNPV 94
                    +  W F S L  DD TT P+
Sbjct: 215 SEGYTETHDVLSWSFASKLP-DDSTTEPL 242

>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1 Length = 240

 Score = 55.6 bits (133), Expect = 7e-10
 Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)

Query: 6   SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSME 65
               +G + +  I+Y+SS ++L V        S V   +   V L + + E+V+ GFS  
Sbjct: 148 FHKYNGEKTDVQITYDSSNNDLRVFLHF--TVSQVKCSVSATVHLEKEVDEWVSVGFSPT 205

Query: 66  TGVDFTIFS---IYLWEFNSSLEMDDETTNPVSN 96
           +G+         +  W F+S     ++ +N + N
Sbjct: 206 SGLTEDTTETHDVLSWSFSSKFR--NKLSNILLN 237

>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B Length = 52

 Score = 51.4 bits (123), Expect = 9e-10
 Identities = 15/47 (31%), Positives = 23/47 (48%)

Query: 44 LDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSSLEMDDET 90
          L   V L+  +PE+V  GFS  TG ++    +  W F+S L     +
Sbjct: 6  LSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHSELSGTSSS 52

>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A* Length = 242

 Score = 54.8 bits (131), Expect = 1e-09
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           D ++G   +  I+Y + T +L+V  +    +      +   VDL+  LPE+V+ GFS   
Sbjct: 161 DWRNGEVADVVITYRAPTKSLTVCLSY--PSDGTSNIITASVDLKAILPEWVSVGFSGGV 218

Query: 67  G--VDFTIFSIYLWEFNSSLEMDD 88
           G   +F    +  W F S+LE ++
Sbjct: 219 GNAAEFETHDVLSWYFTSNLEANN 242

>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A* Length = 237

 Score = 54.8 bits (131), Expect = 1e-09
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           +  +G     +ISY +ST +L+ +      +      +D  VD++  LPE+V FGFS  T
Sbjct: 157 NWTNGEVANVFISYEASTKSLTASLVY--PSLETSFIIDAIVDVKIVLPEWVRFGFSATT 214

Query: 67  GVDFTIFS---IYLWEFNSSLE 85
           G+D        +  W F S+L 
Sbjct: 215 GIDKGYVQTNDVLSWSFESNLP 236

>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A* Length = 257

 Score = 54.4 bits (130), Expect = 2e-09
 Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 6/98 (6%)

Query: 2   YLLRSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFG 61
               SD+ SG+   A ISY+ S   L+V  +    +  +   L + VD+RQ+LPE V  G
Sbjct: 159 RWEDSDIFSGKIATARISYDGSAEILTVVLSYPDGSDYI---LSHSVDMRQNLPESVRVG 215

Query: 62  FSMETGVDFTIF-SIYLWEFNSSLEMDDETTNPVSNPK 98
            S  TG +  +   I  W F+S+L+    +      P+
Sbjct: 216 ISASTGNNQFLTVYILSWRFSSNLQ--STSVKAAMEPE 251

>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1 Length = 234

 Score = 54.0 bits (129), Expect = 2e-09
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 3/81 (3%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFT---GFRNNSVVMQGLDYQVDLRQHLPEFVTFGFS 63
            +++G      I++N++T+ L+V+ T         V    L   V L+  +PE+V  GFS
Sbjct: 153 KLQNGEEANVVIAFNAATNVLTVSLTYPNNSLEEEVTSYTLSDVVSLKDVVPEWVRIGFS 212

Query: 64  METGVDFTIFSIYLWEFNSSL 84
             TG ++    +  W F+S L
Sbjct: 213 ATTGAEYAAHEVLSWSFHSEL 233

>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus} Length = 234

 Score = 54.0 bits (129), Expect = 2e-09
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 4/85 (4%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           +  SG   +A I Y+S T  L+V  T           +  ++DL+  LPE V+ GFS  T
Sbjct: 152 NRVSGSLEKATIIYDSDTKILTVVMTHQNGQITT---ISQEIDLKTVLPEKVSVGFSATT 208

Query: 67  -GVDFTIFSIYLWEFNSSLEMDDET 90
              +     IY W F S+L+  +E 
Sbjct: 209 WNPERERHDIYSWSFTSTLKEPEEQ 233

>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A* Length = 243

 Score = 54.0 bits (129), Expect = 3e-09
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 4/79 (5%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           D        A I+Y++ +  L+V  +       +   L + VDL + LP+ V  GFS   
Sbjct: 165 DAYGSSIATAHITYDARSKILTVLLSYEHGRDYI---LSHVVDLAKVLPQKVRIGFSAGV 221

Query: 67  GVDFTIFSIYLWEFNSSLE 85
           G    +  I  W F S+L+
Sbjct: 222 GY-DEVTYILSWHFFSTLD 239

>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1 Length = 239

 Score = 52.5 bits (125), Expect = 7e-09
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 4/80 (5%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           D  +G    A I+Y +    L  +      ++     +   VDL++ LPE+V  GFS  T
Sbjct: 162 DWINGGVAFATITYLAPNKTLIASLVY--PSNQTTFSVAASVDLKEILPEWVRVGFSAAT 219

Query: 67  GVDFTIFS--IYLWEFNSSL 84
           G    + +  +  W F S+L
Sbjct: 220 GYPTEVETHDVLSWSFTSTL 239

>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A* Length = 242

 Score = 52.4 bits (125), Expect = 9e-09
 Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 3/84 (3%)

Query: 6   SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSME 65
                       I Y +S+  L+ + T   + + +   +   VDL++ LPE+V+ GFS  
Sbjct: 160 KRYGLNNVANVEIIYEASSKTLTASLTYPSDQTSIS--VTSIVDLKEILPEWVSVGFSGS 217

Query: 66  TGVDFTIF-SIYLWEFNSSLEMDD 88
           T +       +  W F S+    +
Sbjct: 218 TYIGRQATHEVLNWYFTSTFINTN 241

>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A* Length = 253

 Score = 52.5 bits (125), Expect = 1e-08
 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 4/94 (4%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           D+ + +  +  I+Y++ST  L    +    +      L   VDL+  LPE+V  GFS  T
Sbjct: 155 DLANNKVAKVLITYDASTSLLVA--SLVYPSQRTSNILSDVVDLKTSLPEWVRIGFSAAT 212

Query: 67  GVDFTIFS--IYLWEFNSSLEMDDETTNPVSNPK 98
           G+D    S  +  W F S+L       +P+    
Sbjct: 213 GLDIPGESHDVLSWSFASNLPHASSNIDPLDLTS 246

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ... Length = 237

 Score = 51.4 bits (122), Expect = 2e-08
 Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 3/95 (3%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           ++++G+   A I YNS    LS   +    +S     + Y VDL   LPE+V  G S  T
Sbjct: 41  NMQNGKVGTAHIIYNSVDKRLSAVVSYPNADSAT---VSYDVDLDNVLPEWVRVGLSAST 97

Query: 67  GVDFTIFSIYLWEFNSSLEMDDETTNPVSNPKRRR 101
           G+     +I  W F S L+ +        +    +
Sbjct: 98  GLYKETNTILSWSFTSKLKSNSTHETNALHFMFNQ 132

>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A* Length = 238

 Score = 50.9 bits (121), Expect = 3e-08
 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 7/87 (8%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLP--EFVTFGFSM 64
            +++G      I Y+S T  L+V      ++   +  L   VDL+Q  P  E+V  G S 
Sbjct: 154 QLENGGVANVVIKYDSPTKILNVVLAF--HSVGTVYTLSNIVDLKQEFPNSEWVNVGLSA 211

Query: 65  ETGVDFTIFS---IYLWEFNSSLEMDD 88
            TG          I  W F SSL+  +
Sbjct: 212 TTGYQKNAVETHEIISWSFTSSLQETN 238

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	187
1qmo_E	133	Mannose binding lectin, FRIL; crosslink, hematopoi	99.89
1dhk_B	223	Bean lectin-like inhibitor, porcine pancreatic alp	99.85
3ipv_A	251	Lectin alpha chain; galactose binding, SEED lectin	99.85
1hql_A	257	Lectin; xenograft antigen, sugar BI protein; HET:	99.85
1ioa_A	240	Arcelin-5A, ARC5A; lectin-like proteins, plant def	99.85
3ujo_A	281	Legume lectin; carbohydrate-binding, galactose, ad	99.84
1avb_A	226	Arcelin-1; lectin-like glycoprotein, plant defense	99.84
1nls_A	237	Concanavalin A; lectin, agglutinin; 0.94A {Canaval	99.84
2bqp_A	234	Protein (PEA lectin); D-glucopyranose complex, sug	99.84
3zyr_A	261	Lectin; sugar binding protein, N-glycan; HET: NAG	99.84
1dbn_A	239	MAL, protein (leukoagglutinin); plant lectin, carb	99.83
1fny_A	237	BARK lectin, BARK agglutinin I,polypeptide A; legu	99.83
1fx5_A	242	UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HO	99.83
1n47_A	233	Isolectin B4; cancer antigen, vicia villosa lectin	99.83
1qnw_A	242	Chitin binding lectin, UEA-II; carbohydrate bindin	99.83
1gzc_A	239	Erythrina crista-galli lectin; carbohydrate, sugar	99.83
2eig_A	234	Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG bin	99.82
1sbf_A	253	Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {G	99.82
1g7y_A	253	Stem/LEAF lectin DB58; jelly roll fold, sugar bind	99.82
1fat_A	252	Phytohemagglutinin-L; glycoprotein, plant defense	99.82
1wbf_A	242	Protein (agglutinin); lectin (agglutinin), legume	99.82
1f9k_A	238	Acidic lectin; legume lectin, glycosylated protein	99.82
2fmd_A	240	Lectin, agglutinin, BMA; legume lectin, beta sandw	99.81
1v6i_A	232	Agglutinin, PNA, galactose-binding lectin; open qu	99.8
1gsl_A	243	Griffonia simplicifolia lectin 4; glycoprotein, ma	99.8
2ltn_B	52	PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP	99.63
1gv9_A	260	P58/ergic-53; lectin, carbohydrate binding; 1.46A	99.46
2dur_A	253	VIP36;, vesicular integral-membrane protein VIP36;	99.45
2a6y_A	256	EMP47P (FORM1); beta sandwich, carbohydrate bindin	98.97
4aoj_A	329	High affinity nerve growth factor receptor; transf	98.02
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	97.99
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	97.97
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	97.96
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	97.91
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	97.87
2a6z_A	222	EMP47P (FORM2); beta sandwich, carbohydrate bindin	97.85
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	97.81
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	97.79
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	97.79
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	97.77
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	97.76
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	97.73
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	97.7
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	97.48
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	97.48
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	97.43
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	97.37
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	97.37
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	97.32
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	97.3
3q4u_A	301	Activin receptor type-1; structural genomics conso	97.26
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	97.24
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	97.24
3o0g_A	292	Cell division protein kinase 5; kinase activator c	97.24
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	97.23
3uqc_A	286	Probable conserved transmembrane protein; structur	97.22
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	97.21
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	97.19
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	97.19
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	97.18
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	97.17
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	97.16
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	97.15
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	97.13
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	97.12
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	97.11
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	97.11
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	97.11
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	97.1
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	97.08
2a19_B	284	Interferon-induced, double-stranded RNA-activated	97.08
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	97.07
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	97.07
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	97.06
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	97.06
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	97.06
3bhy_A	283	Death-associated protein kinase 3; death associate	97.05
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	97.05
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	97.05
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	97.03
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	97.03
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	97.02
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	97.02
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	97.02
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	97.01
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	97.01
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	97.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	96.99
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	96.99
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	96.99
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	96.98
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	96.98
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	96.98
3niz_A	311	Rhodanese family protein; structural genomics, str	96.98
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	96.96
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	96.96
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	96.96
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	96.96
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	96.95
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	96.95
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	96.95
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	96.95
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	96.95
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	96.95
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	96.95
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	96.94
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	96.94
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	96.93
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	96.93
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	96.93
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	96.92
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	96.92
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	96.92
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	96.91
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	96.91
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	96.91
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	96.9
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	96.9
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	96.9
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	96.9
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	96.9
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	96.9
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	96.89
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	96.89
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	96.89
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	96.89
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	96.88
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	96.88
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	96.87
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	96.87
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	96.87
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	96.87
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	96.86
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	96.85
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	96.84
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	96.84
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	96.84
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	96.83
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	96.83
3fme_A	290	Dual specificity mitogen-activated protein kinase;	96.83
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	96.83
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	96.83
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	96.82
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	96.82
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	96.82
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	96.82
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	96.82
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	96.82
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	96.81
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	96.81
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	96.81
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	96.8
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	96.8
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	96.8
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	96.78
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	96.78
3ork_A	311	Serine/threonine protein kinase; structural genomi	96.78
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	96.77
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	96.77
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	96.77
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	96.76
3rp9_A	458	Mitogen-activated protein kinase; structural genom	96.76
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	96.76
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	96.75
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	96.75
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	96.74
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	96.74
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	96.74
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	96.73
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	96.73
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	96.72
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	96.72
3soc_A	322	Activin receptor type-2A; structural genomics cons	96.72
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	96.72
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	96.72
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	96.71
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	96.71
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	96.71
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	96.71
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	96.7
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	96.7
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	96.68
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	96.68
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	96.67
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	96.67
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	96.67
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	96.67
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	96.66
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	96.65
3an0_A	340	Dual specificity mitogen-activated protein kinase;	96.65
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	96.64
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	96.64
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	96.6
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	96.6
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	96.6
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	96.6
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	96.58
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	96.58
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	96.57
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	96.57
3pls_A	298	Macrophage-stimulating protein receptor; protein k	96.57
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	96.56
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	96.56
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	96.54
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	96.54
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	96.54
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	96.54
3aln_A	327	Dual specificity mitogen-activated protein kinase;	96.53
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	96.53
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	96.52
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	96.52
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	96.51
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	96.51
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	96.5
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	96.5
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	96.5
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	96.5
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	96.5
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	96.49
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	96.48
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	96.48
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	96.48
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	96.45
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	96.45
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	96.45
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	96.44
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	96.44
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	96.44
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	96.43
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	96.43
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	96.42
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	96.42
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	96.42
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	96.4
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	96.39
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	96.38
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	96.38
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	96.37
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	96.32
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	96.3
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	96.29
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	96.29
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	96.28
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	96.28
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	96.28
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	96.26
2dyl_A	318	Dual specificity mitogen-activated protein kinase	96.26
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	96.26
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	96.25
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	96.23
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	96.22
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	96.19
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	96.17
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	96.16
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	96.16
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	96.15
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	96.12
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	96.1
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	96.07
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	96.05
2a6v_A	226	EMP46P; beta sandwich, carbohydrate binding protei	96.04
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	96.01
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	96.01
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	96.0
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	96.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	95.98
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	95.89
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	95.82
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	95.81
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	95.79
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	95.76
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	95.74
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	95.59
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	95.56
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	95.54
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	95.5
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	95.44
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	95.28
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	95.2
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	95.07
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	94.9
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	94.33
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	93.61
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	92.52
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	91.76

>1qmo_E Mannose binding lectin, FRIL; crosslink, hematopoietic progenitor, sugar complex; HET: MAN; 3.5A {Dolichos lab lab} SCOP: b.29.1.1

Probab=99.89  E-value=1.9e-23  Score=159.02  Aligned_cols=77  Identities=36%  Similarity=0.488  Sum_probs=71.3

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeeeeeccCCCC
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSSLEM   86 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~F~~~~~~   86 (187)
                      +|.+|+.++|||+||+.+++|+|+|++.+. +  .|+|+..+||+++|+|+||||||||||...+.|+|++|+|++.+..
T Consensus        40 ~l~sG~~~~v~I~Yd~~~~~L~V~l~~~~~-~--~p~ls~~vdLs~~l~e~v~VGFSAsTG~~~~~h~IlsWsF~s~l~~  116 (133)
T 1qmo_E           40 DWQNGKIATAHISYNSVSKRLSVTSYYAGS-K--PATLSYDIELHTVLPEWVRVGLSASTGQDKERNTVHSWSFTSSLWT  116 (133)
T ss_dssp             CCCTTSCEEEEEEEETTTTEEEEEEECSSS-C--CEEEEEECCGGGTSCSEEEEEEEEECSSSCCEEEEEEEEEEEEEEE
T ss_pred             EEcCCCEEEEEEEEeCCCcEEEEEEccCCC-c--cceEEEeechHHhccccEEEEEEeccCCCcceeEEEEEEEEeeCCC
Confidence            478999999999999999999999998764 2  7999999999999999999999999999999999999999988753

>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B*

Probab=99.85  E-value=1.8e-21  Score=159.90  Aligned_cols=81  Identities=25%  Similarity=0.416  Sum_probs=73.8

Q ss_pred             eeccccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCC---ccccceeeee
Q 047282            3 LLRSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVD---FTIFSIYLWE   79 (187)
Q Consensus         3 ~~~~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~---~~~h~i~sW~   79 (187)
                      +|++.|.+|+.++|||+||+.+++|+|+|++.+.  +..|+|+..+||+++|||+|||||||+||..   .+.|+|++|+
T Consensus       122 ~~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdLs~~l~e~~~VGFSAsTG~~~~~~~~H~IlsWs  199 (223)
T 1dhk_B          122 PWDVHDYDGQNAEVRITYNSSTKVFSVSLSNPST--GKSNNVSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLSWS  199 (223)
T ss_dssp             ECCGGGTTTSCEEEEEEEETTTTEEEEEEECTTT--CCEEEEEEECCCCSGGGSEEEEEEEEEECSGGGSCCEEEEEEEE
T ss_pred             cCCccccCCCEEEEEEEEeCCCCEEEEEEecCCC--CccceEEEEechHHhCCCceEEEEEeccCCCccccceEEEEEEE
Confidence            4677788999999999999999999999998764  4479999999999999999999999999998   9999999999


Q ss_pred             eccCCC
Q 047282           80 FNSSLE   85 (187)
Q Consensus        80 F~~~~~   85 (187)
                      |++.+.
T Consensus       200 F~s~~~  205 (223)
T 1dhk_B          200 FSSKFI  205 (223)
T ss_dssp             EEEEC-
T ss_pred             EEeccc
Confidence            998865

>3ipv_A Lectin alpha chain; galactose binding, SEED lectin, hemagglutinin, legume lectin fungal, sugar binding protein; 2.04A {Spatholobus parviflorus} PDB: 3ipv_B 3usu_B* 3usu_A*

Probab=99.85  E-value=1.2e-21  Score=163.56  Aligned_cols=78  Identities=29%  Similarity=0.442  Sum_probs=72.5

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCC---ccccceeeeeeccC
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVD---FTIFSIYLWEFNSS   83 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~---~~~h~i~sW~F~~~   83 (187)
                      +|.+|+.++|||+||+.+++|+|+|++.+.  |..|+|+..+||+++|+|+|||||||+||..   .|.|+|++|+|+++
T Consensus       159 ~l~~G~~~~v~I~Yd~~tk~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~e~h~IlsWsF~s~  236 (251)
T 3ipv_A          159 SLANGEAAKVLITYNSAVKLLVASLVYPSS--KTSFILADIVDLSSVLPEWVRVGFSAATGASGGKIETHDVFSWSFASK  236 (251)
T ss_dssp             CCCTTCEEEEEEEEETTTTEEEEEEECTTT--CCEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEEEEEE
T ss_pred             EecCCCEEEEEEEEeCCCCEEEEEEecCCC--CccceEEEEechHHhCCCcEEEEEEEecCCCccccceeEEEEEEEEEE
Confidence            478999999999999999999999998764  5688999999999999999999999999998   99999999999998


Q ss_pred             CCC
Q 047282           84 LEM   86 (187)
Q Consensus        84 ~~~   86 (187)
                      +..
T Consensus       237 l~~  239 (251)
T 3ipv_A          237 LAG  239 (251)
T ss_dssp             ECC
T ss_pred             CCC
Confidence            754

>1hql_A Lectin; xenograft antigen, sugar BI protein; HET: GLA MBG NAG; 2.20A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1gnz_A*

Probab=99.85  E-value=2.3e-21  Score=162.24  Aligned_cols=86  Identities=34%  Similarity=0.444  Sum_probs=69.3

Q ss_pred             cCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecC-CCccccceeeeeeccCCCC
Q 047282            8 VKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETG-VDFTIFSIYLWEFNSSLEM   86 (187)
Q Consensus         8 l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG-~~~~~h~i~sW~F~~~~~~   86 (187)
                      |.+|+.++|||+||+.+++|+|+|++.+.   ..|+|+..+||+.+|+++|||||||||| ...+.|+|++|+|++.+..
T Consensus       165 l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdL~~~l~e~~~vGFSAsTG~~~~~~H~IlsWsF~s~~~~  241 (257)
T 1hql_A          165 IFSGKIATARISYDGSAEILTVVLSYPDG---SDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRFSSNLQS  241 (257)
T ss_dssp             HTSCSCEEEEEEEETTTTEEEEEEEETTT---EEEEEEEECCGGGTSCSEEEEEEEEECCSCCCEEEEEEEEEEEEEC--
T ss_pred             ccCCceEEEEEEEeCCCCEEEEEEecCCC---CceeeEEeechHHhcCCceEEEEEeccCCCccceeEEEEEEeEecCCC
Confidence            55699999999999999999999998754   4689999999999999999999999999 8999999999999998865


Q ss_pred             CCCC--CCCCCC
Q 047282           87 DDET--TNPVSN   96 (187)
Q Consensus        87 ~~~~--~~p~~~   96 (187)
                      +..+  .+|..|
T Consensus       242 ~~~~~~~~p~~~  253 (257)
T 1hql_A          242 TSVKAAMEPEIT  253 (257)
T ss_dssp             ------------
T ss_pred             CCcccccCCCCC
Confidence            4333  235554

>1ioa_A Arcelin-5A, ARC5A; lectin-like proteins, plant defense proteins, lectin; HET: NAG FUC; 2.70A {Phaseolus vulgaris} SCOP: b.29.1.1

Probab=99.85  E-value=2e-21  Score=161.14  Aligned_cols=81  Identities=23%  Similarity=0.383  Sum_probs=73.7

Q ss_pred             eeccccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCC---ccccceeeee
Q 047282            3 LLRSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVD---FTIFSIYLWE   79 (187)
Q Consensus         3 ~~~~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~---~~~h~i~sW~   79 (187)
                      +|++.|.+|+.++|||+||+.+++|+|+|++.+.  +..|+|+..+||+++|+|+|||||||+||..   .+.|+|++|+
T Consensus       145 ~~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~~H~IlsWs  222 (240)
T 1ioa_A          145 NCDFHKYNGEKTDVQITYDSSNNDLRVFLHFTVS--QVKCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTTETHDVLSWS  222 (240)
T ss_dssp             ECCHHHHCSSCEEEEEEEETTTTEEEEEEEETTT--CCEEEEEEECCGGGTSCSEEEEEEEEEECSSTTTCBCCEEEEEE
T ss_pred             cCCccccCCCEEEEEEEEeCCCcEEEEEEecCCC--CccceeEEEechHHhCCCceEEEEEeccCCCCcccceeEEEEEE
Confidence            3666677999999999999999999999998764  4479999999999999999999999999998   9999999999


Q ss_pred             eccCCC
Q 047282           80 FNSSLE   85 (187)
Q Consensus        80 F~~~~~   85 (187)
                      |++.++
T Consensus       223 F~s~~~  228 (240)
T 1ioa_A          223 FSSKFR  228 (240)
T ss_dssp             EEEEEC
T ss_pred             EEeeCC
Confidence            998764

>3ujo_A Legume lectin; carbohydrate-binding, galactose, adenine binding protein; HET: ADE GAL; 2.00A {Dolichos lablab} PDB: 3ujq_A* 3uk9_A* 3ul2_A* 1fat_A* 1g8w_A*

Probab=99.84  E-value=4.3e-21  Score=162.30  Aligned_cols=79  Identities=32%  Similarity=0.487  Sum_probs=72.0

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCC---CccccceeeeeeccC
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGV---DFTIFSIYLWEFNSS   83 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~---~~~~h~i~sW~F~~~   83 (187)
                      ++.+|+.++|||+||+.+++|+|+|++.+.  |..|+|+..+||+++|+|+||||||||||.   ..|.|+|++|+|+++
T Consensus       178 ~l~~G~~~~vwI~Yd~~tk~L~V~l~~~~~--~~~~~lS~~vDL~~~L~e~v~VGFSAsTG~~~~~~e~H~IlsWSFss~  255 (281)
T 3ujo_A          178 DFANGENAEVLITYDSSTNLLVASLVHPSQ--KTSFIVSERVDLTSVLPEWVSVGFSATTGLSKGYVETNEVLSWSFASK  255 (281)
T ss_dssp             CCCSSCCEEEEEEECTTTCEEEEEEECTTT--CCCEEEEEECCSTTTSCSEEEEEEEEEECSSTTSCCCCEEEEEEEEEE
T ss_pred             cccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCCceEEEEechHHhccCcEEEEEEeecCCCCcccceeEEEEEEEEEE
Confidence            367999999999999999999999998764  558899999999999999999999999996   589999999999998


Q ss_pred             CCCC
Q 047282           84 LEMD   87 (187)
Q Consensus        84 ~~~~   87 (187)
                      +...
T Consensus       256 l~~~  259 (281)
T 3ujo_A          256 LSIN  259 (281)
T ss_dssp             ECSS
T ss_pred             cCCC
Confidence            7653

>1avb_A Arcelin-1; lectin-like glycoprotein, plant defense, insecticidal activi lectin; HET: NAG; 1.90A {Phaseolus vulgaris} SCOP: b.29.1.1

Probab=99.84  E-value=1.4e-21  Score=160.79  Aligned_cols=80  Identities=21%  Similarity=0.377  Sum_probs=72.8

Q ss_pred             eeccccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCC---ccccceeeee
Q 047282            3 LLRSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVD---FTIFSIYLWE   79 (187)
Q Consensus         3 ~~~~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~---~~~h~i~sW~   79 (187)
                      +|++.|.+|+.++|||+||+.+++|+|+|++.+.  +..|+|+..+||+++|||+|||||||+||..   .+.|+|++|+
T Consensus       143 ~~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~~h~IlsWs  220 (226)
T 1avb_A          143 SCNFGHNNGEKAEVRITYDSPKNDLRVSLLYPSS--EEKCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHNVLSWS  220 (226)
T ss_dssp             ECCSGGGTTCEEEEEEEEEGGGTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECSSGGGCEEEEEEEEE
T ss_pred             cCCccccCCCeEEEEEEEeCCCcEEEEEEeecCC--CccceEEEEechHHhCCCceEEEEEeccCCCCcccceeEEEEEE
Confidence            4667788999999999999999999999998764  4479999999999999999999999999999   9999999999


Q ss_pred             eccCC
Q 047282           80 FNSSL   84 (187)
Q Consensus        80 F~~~~   84 (187)
                      |++.+
T Consensus       221 F~s~l  225 (226)
T 1avb_A          221 FSSNF  225 (226)
T ss_dssp             EEEEE
T ss_pred             EEeec
Confidence            98753

>1nls_A Concanavalin A; lectin, agglutinin; 0.94A {Canavalia ensiformis} SCOP: b.29.1.1 PDB: 1bxh_A* 1apn_A 1ces_A 1cjp_A* 1c57_A 1cvn_A* 1con_A 1dq1_A 1dq2_A 1dq4_A 1dq5_A 1dq6_A 1enq_A 1enr_A 1ens_A 1gic_A* 1dq0_A 1hqw_A 1gkb_A* 1i3h_A ...

Probab=99.84  E-value=3.7e-21  Score=159.27  Aligned_cols=77  Identities=32%  Similarity=0.487  Sum_probs=71.3

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeeeeeccCCCC
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSSLEM   86 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~F~~~~~~   86 (187)
                      +|.+|+.++|||+||+.+++|+|+|++.+.   ..|+|+..+||+++|+|+||||||||||...|.|+|++|+|++.+..
T Consensus        41 ~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdLs~~l~e~~~VGFSAsTG~~~~~h~IlsWsF~s~~~a  117 (237)
T 1nls_A           41 NMQNGKVGTAHIIYNSVDKRLSAVVSYPNA---DSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLKS  117 (237)
T ss_dssp             CCCTTCEEEEEEEEETTTTEEEEEEECTTS---CCEEEEEECCGGGTSCSEEEEEEEEECSSSCCCCEEEEEEEEEEEEE
T ss_pred             cccCCCEEEEEEEEeCCCCEEEEEEecCCC---CcceEEEeeChHHhCccccEEEEEeccCCcceeeeeEEEEEEecccc
Confidence            478999999999999999999999998653   57999999999999999999999999999999999999999988753

>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1

Probab=99.84  E-value=3.8e-21  Score=158.88  Aligned_cols=78  Identities=31%  Similarity=0.562  Sum_probs=70.7

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCC---CcccceeEEEecCCccCCceeEEEEEeecCCCccccceeeeeeccC
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNN---SVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSS   83 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~---~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~F~~~   83 (187)
                      ++.+|+.++|||+||+.+++|+|+|++.+..   +|..|+|+..+||+.+||++|||||||+||...+.|+|++|+|+++
T Consensus       153 ~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~~~~~~p~~~~ls~~vdL~~~l~~~~yvGFSAsTG~~~~~H~IlsWsF~s~  232 (234)
T 2bqp_A          153 KLQNGEEANVVIAFNAATNVLTVSLTYPNNSLEEEVTSYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHSE  232 (234)
T ss_dssp             CCCTTCEEEEEEEEETTTTEEEEEEEECC------CEEEEEEEECCGGGTSCSEEEEEEEEECSSSCCEEEEEEEEEEEE
T ss_pred             EEcCCCEEEEEEEEeCCCCEEEEEEecCCCCcccCCCcceEEEEechHHhCCCceEEEEEeccCCCcccEEEEEEEEEee
Confidence            4789999999999999999999999987655   6788999999999999999999999999999999999999999875


Q ss_pred             C
Q 047282           84 L   84 (187)
Q Consensus        84 ~   84 (187)
                      +
T Consensus       233 l  233 (234)
T 2bqp_A          233 L  233 (234)
T ss_dssp             E
T ss_pred             c
Confidence            3

>3zyr_A Lectin; sugar binding protein, N-glycan; HET: NAG BMA MAN GOL; 1.65A {Platypodium elegans} SCOP: b.29.1.1 PDB: 3zvx_A* 1ukg_A* 1q8o_A* 1q8q_A* 1q8s_A* 1q8v_A* 1q8p_A* 2auy_A* 2gme_A 2gmm_A* 2gmp_A* 2gn3_A* 2gn7_A* 2gnb_A* 2gnd_A* 2gnm_A* 2gnt_A 2phf_A* 2phr_A* 2pht_A* ...

Probab=99.84  E-value=4.1e-21  Score=160.96  Aligned_cols=77  Identities=31%  Similarity=0.487  Sum_probs=71.4

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeeeeeccCCCC
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSSLEM   86 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~F~~~~~~   86 (187)
                      .+.+|+.++|||+||+.+++|+|+|++.+.   ..|+|+..+||+++|+|+|||||||+||...|.|+|++|+|++++..
T Consensus       172 ~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~e~h~IlsWsF~s~l~~  248 (261)
T 3zyr_A          172 ERREGKTLNVLVTYNPSTRTIDVVATYPDG---QRYQLSHVVDLTTILPEWVRVGFSAASGEQFQTHNLESWSFTSTLLY  248 (261)
T ss_dssp             CCCTTCCEEEEEEEETTTTEEEEEEECTTC---CEEEEEEECCGGGTSCSEEEEEEEEEESSSCCEEEEEEEEEEEEECC
T ss_pred             cccCCceEEEEEEEcCCCCEEEEEEEcCCC---CCeEEEEEechHHhCcCcEEEEEEecCCCccceEEEEEEEEEEEcCC
Confidence            467999999999999999999999998763   38899999999999999999999999999999999999999998765

>1dbn_A MAL, protein (leukoagglutinin); plant lectin, carbohydrate binding, sialyllactose, sugar BIN protein; HET: NAG SIA GAL BGC; 2.75A {Maackia amurensis} SCOP: b.29.1.1

Probab=99.83  E-value=4.7e-21  Score=158.88  Aligned_cols=75  Identities=29%  Similarity=0.420  Sum_probs=70.0

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCC--ccccceeeeeeccC
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVD--FTIFSIYLWEFNSS   83 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~--~~~h~i~sW~F~~~   83 (187)
                      +|.+|+.++|||+||+.+++|+|+|++.+.  |..|+|+..+||+++|+|+|||||||+||..  .+.|+|++|+|++.
T Consensus       162 ~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~h~IlsWsF~s~  238 (239)
T 1dbn_A          162 DWINGGVAFATITYLAPNKTLIASLVYPSN--QTTFSVAASVDLKEILPEWVRVGFSAATGYPTEVETHDVLSWSFTST  238 (239)
T ss_dssp             CCCTTCCEEEEEEEEGGGTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECSGGGCCCCEEEEEEEEEE
T ss_pred             cccCCCEEEEEEEEeCCCcEEEEEEccCCC--CCcceEEEEechHHhCCccEEEEEEeccCCCccceeeEEEEEEeEec
Confidence            488999999999999999999999998764  6679999999999999999999999999998  99999999999875

>1fny_A BARK lectin, BARK agglutinin I,polypeptide A; legume lectin, jelly roll, sugar binding protein; 1.81A {Robinia pseudoacacia} SCOP: b.29.1.1 PDB: 1fnz_A*

Probab=99.83  E-value=4.9e-21  Score=158.60  Aligned_cols=76  Identities=33%  Similarity=0.526  Sum_probs=70.8

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCC---ccccceeeeeeccC
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVD---FTIFSIYLWEFNSS   83 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~---~~~h~i~sW~F~~~   83 (187)
                      +|.+|+.++|||+||+.+++|+|+|++.+.  |..|+|+..+||+++|+|+|||||||+||..   .+.|+|++|+|+++
T Consensus       157 ~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~~h~IlsWsF~s~  234 (237)
T 1fny_A          157 NWTNGEVANVFISYEASTKSLTASLVYPSL--ETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWSFESN  234 (237)
T ss_dssp             CCCTTCCEEEEEEEEGGGTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEEEEEE
T ss_pred             cccCCCEEEEEEEEeCCCcEEEEEEecCCC--CCcceEEEEechHHhCCCcEEEEEEEeeCCCCcccceeEEEEEEEEEe
Confidence            488999999999999999999999998754  6789999999999999999999999999998   99999999999876


Q ss_pred             C
Q 047282           84 L   84 (187)
Q Consensus        84 ~   84 (187)
                      +
T Consensus       235 l  235 (237)
T 1fny_A          235 L  235 (237)
T ss_dssp             E
T ss_pred             c
Confidence            4

>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A*

Probab=99.83  E-value=1.5e-20  Score=156.18  Aligned_cols=76  Identities=28%  Similarity=0.436  Sum_probs=70.6

Q ss_pred             ccCCC--ceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeec--CCCccccceeeeeecc
Q 047282            7 DVKSG--RRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET--GVDFTIFSIYLWEFNS   82 (187)
Q Consensus         7 ~l~~G--~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasT--G~~~~~h~i~sW~F~~   82 (187)
                      +|.+|  +.++|||+||+.+++|+|+|++.+.  |..|+|+..+||+++|+|+|||||||+|  |.. +.|+|++|+|++
T Consensus       159 ~l~~G~~~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsT~~G~~-~~h~IlsWsF~s  235 (242)
T 1fx5_A          159 NKRYGLNNVANVEIIYEASSKTLTASLTYPSD--QTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQ-ATHEVLNWYFTS  235 (242)
T ss_dssp             CCCCSGGGCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCGGGTSCSEEEEEEEEEEETTSC-EEEEEEEEEEEE
T ss_pred             cccCCCceeEEEEEEEeCCCCEEEEEEecCCC--CccceeeEEechHHhCCccEEEEEEecccCCCc-ceeEEEEEEeEe
Confidence            47899  9999999999999999999998764  6679999999999999999999999999  998 999999999998


Q ss_pred             CCC
Q 047282           83 SLE   85 (187)
Q Consensus        83 ~~~   85 (187)
                      .+.
T Consensus       236 ~l~  238 (242)
T 1fx5_A          236 TFI  238 (242)
T ss_dssp             ESS
T ss_pred             ecc
Confidence            864

>1n47_A Isolectin B4; cancer antigen, vicia villosa lectin, glycoprotein TN-bindin protein, carbohydrate recognition, sugar binding protein; HET: NAG FUC TNR; 2.70A {Vicia villosa} SCOP: b.29.1.1

Probab=99.83  E-value=1.4e-20  Score=155.47  Aligned_cols=76  Identities=33%  Similarity=0.525  Sum_probs=70.2

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCC---ccccceeeeeeccC
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVD---FTIFSIYLWEFNSS   83 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~---~~~h~i~sW~F~~~   83 (187)
                      +|.+|+.++|||+||+.+++|+|+|++.+.  +..|+|+..+||+.+|+|+|||||||+||..   .+.|+|++|+|+++
T Consensus       154 ~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~~~~~vGFSAsTG~~~~~~~~h~IlsWsF~s~  231 (233)
T 1n47_A          154 DMVYGEKANIVITYQASTKALAASLVFPVS--QTSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVETHDIVSWSFAVS  231 (233)
T ss_dssp             CCCTTSCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCGGGTSCSEEEEEEEEEECSSTTCCCCCEEEEEEEEEE
T ss_pred             cccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCcceEEEEechHHhCCCceEEEEEeccCCCccccceeEEEEEEEEee
Confidence            478999999999999999999999998764  4579999999999999999999999999998   99999999999875


Q ss_pred             C
Q 047282           84 L   84 (187)
Q Consensus        84 ~   84 (187)
                      +
T Consensus       232 l  232 (233)
T 1n47_A          232 L  232 (233)
T ss_dssp             E
T ss_pred             c
Confidence            3

>1qnw_A Chitin binding lectin, UEA-II; carbohydrate binding; HET: NAG; 2.35A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1dzq_A* 1qoo_A* 1qos_A* 1qot_A*

Probab=99.83  E-value=6.5e-21  Score=158.26  Aligned_cols=77  Identities=31%  Similarity=0.513  Sum_probs=71.1

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCC--ccccceeeeeeccCC
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVD--FTIFSIYLWEFNSSL   84 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~--~~~h~i~sW~F~~~~   84 (187)
                      +|.+|+.++|||+||+.+++|+|+|++.+.  |..|+|+..+||+++|+|+|||||||+||..  .+.|+|++|+|++.+
T Consensus       161 ~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~h~IlsWsF~s~l  238 (242)
T 1qnw_A          161 DWRNGEVADVVITYRAPTKSLTVCLSYPSD--GTSNIITASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLSWYFTSNL  238 (242)
T ss_dssp             CCCTTCCEEEEEEEEGGGTEEEEEEECTTT--CCEEEEEEECCHHHHSCSEEEEEEEEEESCGGGCBCCEEEEEEEEEEC
T ss_pred             cccCCCEEEEEEEEeCCCcEEEEEEecCCC--CcceeEEEeechHHhcCCceEEEEEeccCCCccceEEEEEEEEeEeec
Confidence            488999999999999999999999998754  6679999999999999999999999999999  999999999999876


Q ss_pred             C
Q 047282           85 E   85 (187)
Q Consensus        85 ~   85 (187)
                      .
T Consensus       239 ~  239 (242)
T 1qnw_A          239 E  239 (242)
T ss_dssp             -
T ss_pred             C
Confidence            4

>1gzc_A Erythrina crista-galli lectin; carbohydrate, sugar binding protein, saccharide, protein-carbohydrate interactions, lactose, glycoprotein; HET: LAT; 1.58A {Erythrina crista-galli} SCOP: b.29.1.1 PDB: 1gz9_A* 1fyu_A* 1ax0_A* 1ax1_A* 1ax2_A* 1axy_A* 1axz_A* 1lte_A* 1sfy_A* 1v00_A* 1uzz_A 1uzy_A* 3n35_A* 3n36_A* 3n3h_A*

Probab=99.83  E-value=9.6e-21  Score=156.98  Aligned_cols=76  Identities=26%  Similarity=0.467  Sum_probs=70.0

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCC---CccccceeeeeeccC
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGV---DFTIFSIYLWEFNSS   83 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~---~~~~h~i~sW~F~~~   83 (187)
                      +|.+|+.++|||+||+.+++|+|+|++.+.  |..|+|+..+||+++|+|+|||||||+||.   ..+.|+|++|+|++.
T Consensus       159 ~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTG~~~~~~~~h~IlsWsF~s~  236 (239)
T 1gzc_A          159 QLDNGQVANVVIKYDAPSKILHVVLVYPSS--GAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQAS  236 (239)
T ss_dssp             CCCTTCEEEEEEEEETTTTEEEEEEECTTT--CCEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEEEEEE
T ss_pred             cccCCCEEEEEEEEeCCCcEEEEEEecCCC--CccceEEEEechHHhCCCceEEEEEeccCCCccccceEEEEEEEeEEe
Confidence            488999999999999999999999998754  567999999999999999999999999997   489999999999876


Q ss_pred             C
Q 047282           84 L   84 (187)
Q Consensus        84 ~   84 (187)
                      +
T Consensus       237 l  237 (239)
T 1gzc_A          237 L  237 (239)
T ss_dssp             E
T ss_pred             c
Confidence            4

>2eig_A Lectin; L-fucosyl, N-acetyl-D-glucosamine, SUG binding protein; HET: NAG; 2.00A {Lotus tetragonolobus}

Probab=99.82  E-value=1.3e-20  Score=155.79  Aligned_cols=76  Identities=34%  Similarity=0.503  Sum_probs=70.4

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeec--CCCccccceeeeeeccCC
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET--GVDFTIFSIYLWEFNSSL   84 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasT--G~~~~~h~i~sW~F~~~~   84 (187)
                      +|.+|+.++|||+||+.+++|+|+|++ +  .|..|+|+..+||+++|+|+|||||||+|  |.. +.|+|++|+|++.+
T Consensus       152 ~l~~g~~~~v~I~Yd~~~~~L~V~l~~-~--~~~~~~ls~~vdL~~~l~e~v~VGFSAsT~~G~~-~~h~IlsWsF~s~l  227 (234)
T 2eig_A          152 NRVSGSLEKATIIYDSDTKILTVVMTH-Q--NGQITTISQEIDLKTVLPEKVSVGFSATTWNPER-ERHDIYSWSFTSTL  227 (234)
T ss_dssp             CCCTTCCEEEEEEEETTTTEEEEEEEE-T--TSCEEEEEEECCHHHHSCSEEEEEEEEEECSSCC-EEEEEEEEEEEEEC
T ss_pred             cccCCCEEEEEEEEeCCCcEEEEEEec-C--CCCcceEeEeechHHhcCCceEEEEEeeecCCCc-ceeEEEEEEEEecC
Confidence            488999999999999999999999998 5  36789999999999999999999999999  988 99999999999886


Q ss_pred             CC
Q 047282           85 EM   86 (187)
Q Consensus        85 ~~   86 (187)
                      ..
T Consensus       228 ~~  229 (234)
T 2eig_A          228 KE  229 (234)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>1sbf_A Soybean agglutinin; lectin; HET: NAG GAL; 2.43A {Glycine max} SCOP: b.29.1.1 PDB: 1sbd_A* 1sbe_A* 1g9f_A* 2sba_A*

Probab=99.82  E-value=1.5e-20  Score=157.06  Aligned_cols=78  Identities=31%  Similarity=0.460  Sum_probs=72.3

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCC--ccccceeeeeeccCC
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVD--FTIFSIYLWEFNSSL   84 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~--~~~h~i~sW~F~~~~   84 (187)
                      +|.+|+.++|||+||+.+++|+|+|++.+.  |..|+|+..+||+.+|+|+||||||||||..  .+.|+|++|+|++.+
T Consensus       155 ~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~H~IlsWsF~s~l  232 (253)
T 1sbf_A          155 DLANNKVAKVLITYDASTSLLVASLVYPSQ--RTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNL  232 (253)
T ss_dssp             CCCTTCCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECSSSCCCEEEEEEEEEEEEE
T ss_pred             cccCCCeeEEEEEEeCCCcEEEEEEecCCC--CCcceEEEEechHHhCCCceEEEEEeccCCCccceeeEEEEEEeEeec
Confidence            488999999999999999999999998764  6689999999999999999999999999998  999999999999887


Q ss_pred             CC
Q 047282           85 EM   86 (187)
Q Consensus        85 ~~   86 (187)
                      ..
T Consensus       233 ~~  234 (253)
T 1sbf_A          233 PH  234 (253)
T ss_dssp             CC
T ss_pred             CC
Confidence            53

>1g7y_A Stem/LEAF lectin DB58; jelly roll fold, sugar binding protein; HET: NAG FUC FUL; 2.50A {Vigna unguiculata subsp} SCOP: b.29.1.1 PDB: 1lul_A 1lu1_A* 1bjq_A* 1lu2_A*

Probab=99.82  E-value=1.8e-20  Score=156.54  Aligned_cols=78  Identities=28%  Similarity=0.474  Sum_probs=72.2

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCC---ccccceeeeeeccC
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVD---FTIFSIYLWEFNSS   83 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~---~~~h~i~sW~F~~~   83 (187)
                      +|.+|+.++|||+||+.+++|+|+|++.+.  |..|+|+..+||+.+|||+|||||||+||..   .+.|+|++|+|++.
T Consensus       155 ~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~~H~IlsWsF~s~  232 (253)
T 1g7y_A          155 GLANGQNAEILITYNAATSLLVASLVHPSR--RTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFASK  232 (253)
T ss_dssp             CCCTTSEEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEECCSSSSCCCCCEEEEEEEEEE
T ss_pred             ccCCCCeEEEEEEEeCCCCEEEEEEecCCC--CCcceEEEEechHHhCCCceEEEEEeCcCCCCcccceeEEEEEEEEee
Confidence            488999999999999999999999998753  6689999999999999999999999999998   99999999999988


Q ss_pred             CCC
Q 047282           84 LEM   86 (187)
Q Consensus        84 ~~~   86 (187)
                      +..
T Consensus       233 l~~  235 (253)
T 1g7y_A          233 LPD  235 (253)
T ss_dssp             ECS
T ss_pred             CCC
Confidence            753

>1fat_A Phytohemagglutinin-L; glycoprotein, plant defense protein, lectin; HET: NAG; 2.80A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1g8w_A*

Probab=99.82  E-value=2.2e-20  Score=155.99  Aligned_cols=78  Identities=32%  Similarity=0.477  Sum_probs=71.8

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCC---ccccceeeeeeccC
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVD---FTIFSIYLWEFNSS   83 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~---~~~h~i~sW~F~~~   83 (187)
                      +|.+|+.++|||+||+.+++|+|+|++.+.  |..|+|+..+||+.+|||+|||||||+||..   .+.|+|++|+|++.
T Consensus       154 ~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~~~VGFSAsTG~~~~~~~~H~IlsWsF~s~  231 (252)
T 1fat_A          154 DFVNGENAEVLITYDSSTNLLVASLVYPSQ--KTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSFASK  231 (252)
T ss_dssp             CCCTTCEEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTBCCCCEEEEEEEEEE
T ss_pred             cccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCcceEEEEechHHhCCCceEEEEEeccCCCCcccceEEEEEEEEEee
Confidence            488999999999999999999999998754  6689999999999999999999999999998   99999999999988


Q ss_pred             CCC
Q 047282           84 LEM   86 (187)
Q Consensus        84 ~~~   86 (187)
                      +..
T Consensus       232 l~~  234 (252)
T 1fat_A          232 LSD  234 (252)
T ss_dssp             EC-
T ss_pred             CCC
Confidence            753

>1wbf_A Protein (agglutinin); lectin (agglutinin), legume lectin, protein crystallography, group specificity, saccharide free form; HET: NAG; 2.30A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 2d3s_A* 2dtw_A* 1wbl_A* 2dty_A* 2du0_A* 2du1_A* 2e51_A* 2e53_A* 2zmk_A* 2zml_A* 2zmn_A* 2e7t_A* 2e7q_A*

Probab=99.82  E-value=2.5e-20  Score=154.81  Aligned_cols=77  Identities=32%  Similarity=0.422  Sum_probs=71.4

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeec----CCC---ccccceeeee
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET----GVD---FTIFSIYLWE   79 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasT----G~~---~~~h~i~sW~   79 (187)
                      +|.+|+.++|||+||+.+++|+|+|++.+.  |..|+|+..+||+++|+|+|||||||||    |..   .+.|+|++|+
T Consensus       154 ~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~e~v~VGFSAsTg~~~G~~~~~~~~h~IlsWs  231 (242)
T 1wbf_A          154 TLDNGGIANVVIKYDASTKILHVVLVFPSL--GTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILSWS  231 (242)
T ss_dssp             CCCTTSCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSCSEEEEEEEEEECCGGGCCTTCCCCCEEEEEE
T ss_pred             EecCCCEEEEEEEEeCCCCEEEEEEccCCC--CCcceEEEEechHHhcCCceEEEEEEeecCcCCccccccceEEEEEEE
Confidence            488999999999999999999999998764  5679999999999999999999999999    888   8999999999


Q ss_pred             eccCCC
Q 047282           80 FNSSLE   85 (187)
Q Consensus        80 F~~~~~   85 (187)
                      |++.+.
T Consensus       232 F~s~l~  237 (242)
T 1wbf_A          232 FSASLP  237 (242)
T ss_dssp             EEEECC
T ss_pred             eEecCC
Confidence            998864

>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A*

Probab=99.82  E-value=2.4e-20  Score=154.48  Aligned_cols=77  Identities=31%  Similarity=0.482  Sum_probs=71.2

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCc--eeEEEEEeecCCC---ccccceeeeeec
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPE--FVTFGFSMETGVD---FTIFSIYLWEFN   81 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~--~v~VGFSasTG~~---~~~h~i~sW~F~   81 (187)
                      +|.+|+.++|||+||+.+++|+|+|++.+.  |..|+|+..+||+.+|+|  +||||||||||..   .+.|+|++|+|+
T Consensus       154 ~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~--~~~~~ls~~vdL~~~l~~~~~~~vGFSAsTG~~~~~~~~h~IlsWsF~  231 (238)
T 1f9k_A          154 QLENGGVANVVIKYDSPTKILNVVLAFHSV--GTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWSFT  231 (238)
T ss_dssp             CCCTTCCEEEEEEEETTTTEEEEEEEETTT--TEEEEEEEECCHHHHSTTCSEEEEEEEEEECSSTTCCCEEEEEEEEEE
T ss_pred             cccCCCEEEEEEEEeCCCCEEEEEEecCCC--CCceeEEEEechHHhCCCCceEEEEEEeCcCCCCcccceEEEEEeEeE
Confidence            488999999999999999999999998764  668999999999999999  9999999999998   999999999999


Q ss_pred             cCCC
Q 047282           82 SSLE   85 (187)
Q Consensus        82 ~~~~   85 (187)
                      +.+.
T Consensus       232 s~~~  235 (238)
T 1f9k_A          232 SSLQ  235 (238)
T ss_dssp             EEC-
T ss_pred             eecc
Confidence            8764

>2fmd_A Lectin, agglutinin, BMA; legume lectin, beta sandwich, protein-carbohydrate complex, sugar binding protein; HET: MAN; 1.90A {Bowringia mildbraedii}

Probab=99.81  E-value=5.9e-20  Score=152.30  Aligned_cols=76  Identities=34%  Similarity=0.476  Sum_probs=70.6

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeeeeeccCCC
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSSLE   85 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~F~~~~~   85 (187)
                      ++.+|+.++|||+||+.+++|+|+|++.+.   ..|+|+..+||+.+||++|||||||+||...+.|+|++|+|++.+.
T Consensus       160 ~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdL~~~l~~~~yvGFSAsTG~~~~~H~IlsWsF~s~~~  235 (240)
T 2fmd_A          160 DWQNGKTATAHISYNSASKRLSVVSSYPNS---SPVVVSFDVELNNVBPBWVRVGFSATTGQYTQTNNILAWSFRSSLM  235 (240)
T ss_dssp             CCCSSCEEEEEEEEETTTTEEEEEEECTTS---CCEEEEEECCGGGTSCSEEEEEEEEECCSSCBCCEEEEEEEEEEEE
T ss_pred             EeeCCCEEEEEEEEeCCCCEEEEEEecCCC---CceEEEEEechHHhCCCceEEEEEeccCCccccEEEEEEEeEecCC
Confidence            478999999999999999999999998754   4789999999999999999999999999999999999999998764

>1v6i_A Agglutinin, PNA, galactose-binding lectin; open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography; HET: GAL GLC; 2.15A {Arachis hypogaea} SCOP: b.29.1.1 PDB: 1bzw_A* 1v6j_A* 1v6k_A* 1v6l_A* 1v6m_A 1v6n_A 1v6o_A 2dva_A* 1cq9_A 1ciw_A* 1qf3_A* 1rir_A* 1rit_A* 2dh1_A 1cr7_A* 2dv9_A* 2dvb_A* 2dvd_A* 2dvf_A 2dvg_A* ...

Probab=99.80  E-value=6.6e-20  Score=151.36  Aligned_cols=75  Identities=39%  Similarity=0.521  Sum_probs=69.3

Q ss_pred             ccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCC--CccccceeeeeeccCC
Q 047282            7 DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGV--DFTIFSIYLWEFNSSL   84 (187)
Q Consensus         7 ~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~--~~~~h~i~sW~F~~~~   84 (187)
                      +|.+|+.++|||+||+.+++|+|+|++ +  .|..|+|+..+||+++|+|+|||||| |||.  ..+.|+|++|+|++.+
T Consensus       154 ~l~~G~~~~v~I~Yd~~~~~L~V~l~~-~--~~~~~~ls~~vdL~~~l~e~v~VGFS-sTG~~~~~~~h~IlsWsF~s~l  229 (232)
T 1v6i_A          154 NSVSGAVVKVTVIYDSSTKTLSVAVTN-D--NGDITTIAQVVDLKAKLPERVKFGFS-ASGSLGGRQIHLIRSWSFTSTL  229 (232)
T ss_dssp             CCCTTCEEEEEEEEETTTTEEEEEEEC-T--TSCEEEEEEECCHHHHSCSEEEEEEE-EECCSSBCCEEEEEEEEEEEEE
T ss_pred             cccCCCEEEEEEEEeCCCcEEEEEEec-C--CCCcceEEEEechHHhCCccEEEEEE-ecCCCccccEEEEEEEEEEeec
Confidence            488999999999999999999999998 4  46789999999999999999999999 9998  5999999999999875


Q ss_pred             C
Q 047282           85 E   85 (187)
Q Consensus        85 ~   85 (187)
                      .
T Consensus       230 ~  230 (232)
T 1v6i_A          230 I  230 (232)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1gsl_A Griffonia simplicifolia lectin 4; glycoprotein, manganese; HET: FUC GAL MAG NAG BMA; 2.00A {Griffonia simplicifolia} SCOP: b.29.1.1 PDB: 1lec_A* 1led_A*

Probab=99.80  E-value=1e-19  Score=151.21  Aligned_cols=75  Identities=28%  Similarity=0.323  Sum_probs=68.8

Q ss_pred             cCC---CceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeeeeeccCC
Q 047282            8 VKS---GRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSSL   84 (187)
Q Consensus         8 l~~---G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~F~~~~   84 (187)
                      |.+   |+.++|||+||+.+++|+|+|++...   ..|+|+..+||+.+||++|||||||+|| ..+.|+|++|+|++.+
T Consensus       163 l~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~~---~~~~ls~~vdL~~~l~~~~~vGFSAsTG-~~~~h~IlsWsF~s~l  238 (243)
T 1gsl_A          163 NDDAYGSSIATAHITYDARSKILTVLLSYEHG---RDYILSHVVDLAKVLPQKVRIGFSAGVG-YDEVTYILSWHFFSTL  238 (243)
T ss_dssp             HHHHTSCCEEEEEEEEETTTTEEEEEEEETTS---CEEEEEEECCHHHHSCSEEEEEEEEEEC-BSEEEEEEEEEEEEEC
T ss_pred             EeccCCCcEEEEEEEEeCCCCEEEEEEecCCC---CceeEEEEechHHhCCCceEEEEEeccC-CcceeEEEEEEEEeec
Confidence            555   99999999999999999999998764   4689999999999999999999999999 9999999999999886


Q ss_pred             CC
Q 047282           85 EM   86 (187)
Q Consensus        85 ~~   86 (187)
                      ..
T Consensus       239 ~~  240 (243)
T 1gsl_A          239 DG  240 (243)
T ss_dssp             TT
T ss_pred             cC
Confidence            43

>2ltn_B PEA lectin, beta chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1hkd_B 1rin_B* 1ofs_B* 1bqp_B* 1loe_B 1loa_B* 1loc_B* 1lod_B* 1lob_B 1lof_B* 1log_B* 1lof_D* 1les_B* 2b7y_B* 1lgc_B* 1lgb_B* 1len_B 1lem_B 2lal_B

Probab=99.63  E-value=9.6e-17  Score=103.11  Aligned_cols=45  Identities=33%  Similarity=0.655  Sum_probs=42.5

Q ss_pred             cceeEEEecCCccCCceeEEEEEeecCCCccccceeeeeeccCCC
Q 047282           41 MQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSSLE   85 (187)
Q Consensus        41 ~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~F~~~~~   85 (187)
                      .|+|+..+||+++|+|+|||||||+||...+.|.|++|+|++.++
T Consensus         3 ~p~ls~~vdLs~~l~e~v~VGFSAsTG~~~~~h~IlsWsF~s~~~   47 (52)
T 2ltn_B            3 SYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAHEVLSWSFHSELS   47 (52)
T ss_dssp             EEEEEEECCHHHHSCSEEEEEEEEECCSSCCEEEEEEEEEEEEEC
T ss_pred             eeeEEEEEcHHHhcCceEEEEEEeccCCcceeEEEEEeEEEeecc
Confidence            589999999999999999999999999999999999999998764

>1gv9_A P58/ergic-53; lectin, carbohydrate binding; 1.46A {Rattus norvegicus} SCOP: b.29.1.13 PDB: 1r1z_A 3a4u_A 3lcp_A

Probab=99.46  E-value=2.8e-13  Score=113.23  Aligned_cols=76  Identities=17%  Similarity=0.089  Sum_probs=61.1

Q ss_pred             eccccC-CCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeeeeecc
Q 047282            4 LRSDVK-SGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNS   82 (187)
Q Consensus         4 ~~~~l~-~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~F~~   82 (187)
                      |+..++ +|..++|||+||+.  .|+|.+.+...+......++..+| ..+||+++||||||+||...+.|+|++|+|..
T Consensus       174 c~~~~~n~g~~~~~~I~Y~~~--~L~V~l~~~~~~~~~~~~~~~~vd-~~~LP~~~~vGfSAaTG~~~e~hdIlsw~~~~  250 (260)
T 1gv9_A          174 CQRDFRNKPYPVRAKITYYQK--TLTVMINNGFTPDKNDYEFCAKVE-NMVIPTQGHFGISAATGGLADDHDVLSFLTFQ  250 (260)
T ss_dssp             ECCCCBSCSSCEEEEEEEETT--EEEEEEECSSCCCTTCCEEEEEET-TCCCCSSBEEEEEEECCSSCCEEEEEEEEEEE
T ss_pred             cChhhccCCCcEEEEEEEECC--EEEEEEeeccCCCCCcceEEEEEc-ccccCCCcEEEEEEeCCCCcceEEEEEEEEEE
Confidence            434453 58899999999986  899999874211112347888899 68899999999999999999999999999975

>2dur_A VIP36;, vesicular integral-membrane protein VIP36; beta sandwich, carbohydrate binding protein, cargo receptor, transport; HET: MAN; 1.65A {Canis lupus familiaris} PDB: 2dup_A 2duq_A* 2duo_A* 2e6v_A*

Probab=99.45  E-value=1.9e-13  Score=113.79  Aligned_cols=76  Identities=16%  Similarity=0.087  Sum_probs=58.8

Q ss_pred             eccccC-CCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeeeeecc
Q 047282            4 LRSDVK-SGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNS   82 (187)
Q Consensus         4 ~~~~l~-~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~F~~   82 (187)
                      |+.+++ .|..++|||+||+.  .|+|+|.+.+. .+..+++  .++ ..+||++|||||||+||...+.|+|++|+|..
T Consensus       154 c~~~~~n~g~~~~v~I~Y~~~--~L~V~l~~~~~-~~~~~~~--~~~-~v~Lp~~~yvGfSAaTG~~~~~h~Ilswsf~s  227 (253)
T 2dur_A          154 CTADFRNRDHDTFLAVRYSRG--RLTVMTDLEDK-NEWKNCI--DIT-GVRLPTGYYFGASAGTGDLSDNHDIISMKLFQ  227 (253)
T ss_dssp             EECCCBTCSSCEEEEEEEETT--EEEEEEECSSS-SCCEEEE--EEC-CEECCSSBEEEEEEEESSSCCEEEEEEEEEEE
T ss_pred             ccHhhccCCCCeEEEEEEECC--EEEEEEeCCCC-CCceEEE--EeC-CcccCCCcEEEEEeccCCCcceEEEEEEEEEe
Confidence            444553 48889999999975  89999997653 2333343  344 45699999999999999999999999999986


Q ss_pred             CCC
Q 047282           83 SLE   85 (187)
Q Consensus        83 ~~~   85 (187)
                      -..
T Consensus       228 l~~  230 (253)
T 2dur_A          228 LMV  230 (253)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            543

>2a6y_A EMP47P (FORM1); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.42A {Saccharomyces cerevisiae} SCOP: b.29.1.13

Probab=98.97  E-value=1.7e-09  Score=90.11  Aligned_cols=71  Identities=15%  Similarity=0.232  Sum_probs=55.3

Q ss_pred             eccccC-CCceEEEEEEee-CCCceEEEEEEeCCCCCcccceeEEEecCCcc-CCcee-EEEEEeecC---CCcccccee
Q 047282            4 LRSDVK-SGRRNEAWISYN-SSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQH-LPEFV-TFGFSMETG---VDFTIFSIY   76 (187)
Q Consensus         4 ~~~~l~-~G~~~~awI~Yd-~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~-L~~~v-~VGFSasTG---~~~~~h~i~   76 (187)
                      |....+ +|...+|||+|+ +.++.|+|.+.+       ..    -+++..+ ||+++ ||||||+||   ...+.|+|+
T Consensus       153 c~~~~rn~~~~~~v~I~Y~~~~~~~L~V~i~~-------~~----c~~~~~v~LP~~~~~~GfSAaTG~~~~~~d~hdIl  221 (256)
T 2a6y_A          153 CLMGYQDSSVPSTIRVTYDLEDDNLLKVQVDN-------KV----CFQTRKVRFPSGSYRIGVTAQNGAVNNNAESFEIF  221 (256)
T ss_dssp             EECCCTTCSSCEEEEEEEEGGGTSEEEEEETT-------EE----EEEESCEECCSEEEEEEEEEECCSGGGCCCEEEEE
T ss_pred             ceeecccCCCcEEEEEEEecCCCcEEEEEEcC-------EE----EEEECcEEeCCCCeEEEEEEeCCCCCCCcceEEEE
Confidence            433444 688899999999 888999999854       11    2334444 89998 699999999   778999999


Q ss_pred             eeeeccCCC
Q 047282           77 LWEFNSSLE   85 (187)
Q Consensus        77 sW~F~~~~~   85 (187)
                      +|+|.....
T Consensus       222 s~~~~~~~~  230 (256)
T 2a6y_A          222 KMQFFNGVI  230 (256)
T ss_dssp             EEEEEESCS
T ss_pred             EEEEEeccc
Confidence            999998543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=98.02  E-value=8.6e-06  Score=69.44  Aligned_cols=55  Identities=13%  Similarity=-0.046  Sum_probs=39.6

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPYGG  170 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~~~  170 (187)
                      ..||+|+||.||+|.+..     ++..||||++..........+..|++-+++-+|+|--
T Consensus        47 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV  106 (329)
T 4aoj_A           47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIV  106 (329)
T ss_dssp             EEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBC
T ss_pred             EEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCC
Confidence            889999999999998753     4678999999766555555555666655555555543

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=97.99  E-value=6.5e-06  Score=69.04  Aligned_cols=47  Identities=17%  Similarity=0.246  Sum_probs=33.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHH---HhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRD---IRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~---Ir~~n  165 (187)
                      +.||+|+||.||+|++.  |..||||++....... ..++.++..   ++|||
T Consensus         9 ~~iG~G~fG~Vy~~~~~--g~~VAvK~l~~~~~~~-~~~e~Ei~~~~~l~HpN   58 (303)
T 3hmm_A            9 ESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERS-WFREAEIYQTVMLRHEN   58 (303)
T ss_dssp             EEEEECSSSEEEEEEET--TEEEEEEEECGGGHHH-HHHHHHHHTSTTCCCTT
T ss_pred             EEEeeCCCeEEEEEEEC--CEEEEEEEECccchhh-HHHHHHHHHHhcCCCCC
Confidence            78999999999999984  7899999997644332 233445543   45555

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=97.97  E-value=8.4e-06  Score=68.90  Aligned_cols=51  Identities=22%  Similarity=0.207  Sum_probs=34.4

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeecccch----hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQLKHG----KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~~~~----~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|.+..     ++..||||++.....    ..+..+......++|||-
T Consensus        32 ~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNI   91 (308)
T 4gt4_A           32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV   91 (308)
T ss_dssp             EEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTB
T ss_pred             eEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCC
Confidence            789999999999999742     467899999965322    233344445556777663

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=97.96  E-value=1.3e-05  Score=67.52  Aligned_cols=56  Identities=14%  Similarity=-0.002  Sum_probs=37.7

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPYGGE  171 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~~~~  171 (187)
                      ..||+|+||.||+|.+..     ++..||||++..........+..|++-+++-+|+|--.
T Consensus        19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~   79 (299)
T 4asz_A           19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK   79 (299)
T ss_dssp             EEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             eEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCcc
Confidence            889999999999998752     46789999997655555555555666555555555433

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=97.91  E-value=1.1e-05  Score=67.84  Aligned_cols=53  Identities=21%  Similarity=0.175  Sum_probs=35.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|....++..||+|.+....  ......+..|++-++.-+|+|
T Consensus        32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~Hpn   86 (290)
T 3fpq_A           32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPN   86 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTT
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCC
Confidence            57999999999999998888999999996532  222233334444444444444

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=97.87  E-value=1.1e-05  Score=69.49  Aligned_cols=50  Identities=18%  Similarity=0.225  Sum_probs=38.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh---hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK---AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~---~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..||||++......   ....+...++.++|||
T Consensus        80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~Hpn  132 (346)
T 4fih_A           80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN  132 (346)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTT
T ss_pred             EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCC
Confidence            7799999999999999888999999999654332   3334455556676666

>2a6z_A EMP47P (FORM2); beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.00A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a70_A 2a71_A

Probab=97.85  E-value=2e-05  Score=64.13  Aligned_cols=69  Identities=16%  Similarity=0.216  Sum_probs=48.1

Q ss_pred             eccccC-CCceEEEEEEee-CCCceEEEEEEeCCCCCcccceeEEEecCCccCCce-eEEEEEeecC---CCccccceee
Q 047282            4 LRSDVK-SGRRNEAWISYN-SSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEF-VTFGFSMETG---VDFTIFSIYL   77 (187)
Q Consensus         4 ~~~~l~-~G~~~~awI~Yd-~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~-v~VGFSasTG---~~~~~h~i~s   77 (187)
                      |....+ .+...+++|+|+ ...+.|+|.+..      ..+.-...++    ||+. .|+||||+||   ...+.|+|++
T Consensus       146 C~~~~rn~~~~~~~rI~Y~~~~~~~l~v~id~------~~C~~~~~v~----LP~~~~y~G~SA~TG~l~~~~d~hdil~  215 (222)
T 2a6z_A          146 CLMGYQDSSVPSTIRVTYDLEDDNLLKVQVDN------KVCFQTRKVR----FPSGSYRIGVTAQNGAVNNNAESFEIFK  215 (222)
T ss_dssp             EECCCTTEEEEEEEEEEEEGGGTSEEEEEETT------EEEEEESCCC----CCSSEEEEEEEEECCSGGGCCCEEEEEE
T ss_pred             cceeccCCCCcEEEEEEEEcCCCcEEEEEEcC------eEEEEeCCee----cCCCCcEEEEEEcCCCCCCCCccEEEEE
Confidence            333443 456789999999 667788888743      1221122233    5665 4799999999   7889999999


Q ss_pred             eeecc
Q 047282           78 WEFNS   82 (187)
Q Consensus        78 W~F~~   82 (187)
                      |++..
T Consensus       216 ~~~~~  220 (222)
T 2a6z_A          216 MQFFN  220 (222)
T ss_dssp             EEEEE
T ss_pred             EEEEc
Confidence            98863

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=97.81  E-value=3.2e-05  Score=64.91  Aligned_cols=54  Identities=19%  Similarity=0.164  Sum_probs=35.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-hhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-KAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      ..||+|+||.||+|+...++..+|||++..... ........|++-+++-+|+|-
T Consensus        11 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnI   65 (299)
T 4g31_A           11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI   65 (299)
T ss_dssp             EEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTB
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCC
Confidence            689999999999999988899999999965332 222333444444444444443

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=97.79  E-value=2.1e-05  Score=65.64  Aligned_cols=50  Identities=22%  Similarity=0.264  Sum_probs=33.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch------hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG------KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~------~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..+|+|.+.+...      .....+....+.++|||
T Consensus        19 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~Hpn   74 (275)
T 3hyh_A           19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH   74 (275)
T ss_dssp             EEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTT
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCC
Confidence            789999999999999888899999999865321      12233444555666665

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=97.79  E-value=2.4e-05  Score=68.38  Aligned_cols=50  Identities=12%  Similarity=0.163  Sum_probs=37.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--h---hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--K---AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~---~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..||||++.....  .   ....+...++.++|||
T Consensus        60 ~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~Hpn  114 (398)
T 4b99_A           60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDN  114 (398)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTT
T ss_pred             EEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCC
Confidence            789999999999999988899999999964321  1   2233444555667766

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=97.77  E-value=2e-05  Score=68.12  Aligned_cols=50  Identities=16%  Similarity=0.274  Sum_probs=30.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hh---hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GK---AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~---~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|+...++..||||.+....  ..   ....+...++.|+|||
T Consensus        30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~Hpn   84 (350)
T 4b9d_A           30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN   84 (350)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTT
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCC
Confidence            78999999999999998889999999996532  22   2223334444566655

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=97.76  E-value=2.4e-05  Score=69.25  Aligned_cols=50  Identities=18%  Similarity=0.225  Sum_probs=37.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh---hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK---AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~---~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..||||++......   ....+...++.++|||
T Consensus       157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~Hpn  209 (423)
T 4fie_A          157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN  209 (423)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTT
T ss_pred             eEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence            7899999999999999988999999999654332   2334455555666665

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=97.73  E-value=2.6e-05  Score=66.33  Aligned_cols=30  Identities=20%  Similarity=0.123  Sum_probs=28.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+++...++..+|+|.+.+
T Consensus        38 ~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k   67 (311)
T 4aw0_A           38 KILGEGSFSTVVLARELATSREYAIKILEK   67 (311)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEH
T ss_pred             EEEecccCeEEEEEEECCCCCEEEEEEEEH
Confidence            789999999999999988899999999965

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=97.70  E-value=1.4e-05  Score=68.64  Aligned_cols=48  Identities=19%  Similarity=0.187  Sum_probs=35.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|+.+.++..||||++..+...  .++...+..++|||
T Consensus        64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~--~~E~~il~~l~Hpn  111 (336)
T 4g3f_A           64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--VEELVACAGLSSPR  111 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--THHHHTTTTCCCTT
T ss_pred             cEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH--HHHHHHHHhCCCCC
Confidence            6799999999999999888999999999653221  22333445566665

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=97.48  E-value=0.00011  Score=60.33  Aligned_cols=53  Identities=17%  Similarity=0.189  Sum_probs=35.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc-hhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|+...++..+|||++.... .........+++.+++-+|++
T Consensus        12 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpn   65 (332)
T 3qd2_B           12 QCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG   65 (332)
T ss_dssp             EEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTT
T ss_pred             eEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCC
Confidence            68999999999999998778999999986432 222233344444444444443

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=97.48  E-value=0.00011  Score=61.41  Aligned_cols=50  Identities=16%  Similarity=0.182  Sum_probs=38.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHh-CCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIR-NPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir-~~n  165 (187)
                      ..||+|+||.||++....++..+|+|.+..........+...++.++ |+|
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~n   67 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPN   67 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTT
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCC
Confidence            67999999999999998888999999997655444455555555665 655

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=97.43  E-value=0.00021  Score=58.87  Aligned_cols=51  Identities=18%  Similarity=0.180  Sum_probs=41.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHh-CCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIR-NPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir-~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|.+..........+...++.++ |+|.
T Consensus        42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i   93 (330)
T 3nsz_A           42 RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNI   93 (330)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTB
T ss_pred             EEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCE
Confidence            88999999999999988778999999997666666666667777786 6654

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=97.37  E-value=0.00019  Score=65.44  Aligned_cols=50  Identities=30%  Similarity=0.330  Sum_probs=37.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhh---HHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKA---VALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~---~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|..+.++..+|+|.+.......   ...+...++.++|||
T Consensus       163 ~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpn  215 (573)
T 3uto_A          163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT  215 (573)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTT
T ss_pred             EEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCC
Confidence            78999999999999999889999999996544332   233444555677766

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=97.37  E-value=0.00035  Score=57.27  Aligned_cols=53  Identities=21%  Similarity=0.125  Sum_probs=39.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||++....++..+|+|.+..........+..+++.+++-+|++
T Consensus        16 ~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~   68 (310)
T 3s95_A           16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPN   68 (310)
T ss_dssp             EEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTT
T ss_pred             ceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcC
Confidence            78999999999999998888999999986544444444555555555544544

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=97.32  E-value=0.00025  Score=57.76  Aligned_cols=31  Identities=19%  Similarity=0.486  Sum_probs=25.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....++..+|+|.+...
T Consensus        19 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~   49 (298)
T 2zv2_A           19 DEIGKGSYGVVKLAYNENDNTYYAMKVLSKK   49 (298)
T ss_dssp             EEEEC--CCEEEEEEETTTTEEEEEEEEECC
T ss_pred             eEEeecCCEEEEEEEECCCCcEEEEEEeehh
Confidence            7899999999999999888899999998653

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=97.30  E-value=0.00032  Score=58.33  Aligned_cols=52  Identities=15%  Similarity=0.040  Sum_probs=36.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGP  167 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~  167 (187)
                      ..||+|+||.||+|....++..||||.+.............+++.++.-+|+
T Consensus        51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            6799999999999999877899999998654433333334444444444443

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=97.26  E-value=0.0004  Score=56.26  Aligned_cols=48  Identities=17%  Similarity=0.214  Sum_probs=33.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHH--HhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRD--IRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~--Ir~~n  165 (187)
                      ..||+|+||.||+|...  +..+|+|.+..........+.+....  ++|+|
T Consensus        14 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~n   63 (301)
T 3q4u_A           14 ECVGKGRYGEVWRGSWQ--GENVAVKIFSSRDEKSWFRETELYNTVMLRHEN   63 (301)
T ss_dssp             EEEEECSSEEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTT
T ss_pred             EeeccCCCcEEEEEEEC--CEEEEEEEeccccchhhHHHHHHHHHhhccCcC
Confidence            78999999999999873  78899999976544333333333333  55655

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=97.24  E-value=0.0004  Score=57.24  Aligned_cols=51  Identities=16%  Similarity=0.102  Sum_probs=36.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch----hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG----KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~----~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|.+.....    .....+....+.++|+|-
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   69 (319)
T 4euu_A           15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNI   69 (319)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTB
T ss_pred             EEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCc
Confidence            789999999999999988889999999864321    222334445556666553

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=97.24  E-value=0.00049  Score=55.98  Aligned_cols=53  Identities=19%  Similarity=0.113  Sum_probs=32.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|....++..+|+|.+.............+++.+++-+|++
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~   69 (320)
T 2i6l_A           17 KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDN   69 (320)
T ss_dssp             EECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTT
T ss_pred             EEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCC
Confidence            78999999999999998888999999986554433333444444444433333

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=97.24  E-value=0.00035  Score=56.75  Aligned_cols=30  Identities=37%  Similarity=0.479  Sum_probs=27.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus         8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   37 (292)
T 3o0g_A            8 EKIGEGTYGTVFKAKNRETHEIVALKRVRL   37 (292)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEES
T ss_pred             eEecCCCCeEEEEEEECCCCceEEEEeeec
Confidence            679999999999999988889999999864

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=97.23  E-value=0.00058  Score=55.10  Aligned_cols=53  Identities=11%  Similarity=0.001  Sum_probs=35.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      .+||+|+||.||+|....++..+|+|.+.............++..+++-.|++
T Consensus        28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~   80 (295)
T 2clq_A           28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKN   80 (295)
T ss_dssp             CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTT
T ss_pred             EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCC
Confidence            57999999999999988778899999986544333333334444444333333

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=97.22  E-value=0.00043  Score=56.83  Aligned_cols=53  Identities=6%  Similarity=-0.260  Sum_probs=36.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch---hhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG---KAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~---~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|....++..+|+|.+.....   .....+..+++.++.-+|++
T Consensus        37 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~   92 (286)
T 3uqc_A           37 IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPG   92 (286)
T ss_dssp             EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTT
T ss_pred             EEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCC
Confidence            789999999999999988789999999965322   22233344444444444443

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=97.21  E-value=0.00059  Score=55.37  Aligned_cols=53  Identities=15%  Similarity=0.173  Sum_probs=36.1

Q ss_pred             cEEcccCCceEEEEEE----cCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFL----RETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l----~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||++..    ..++..+|+|++..........+..+++.++.-+|++
T Consensus        16 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~   72 (295)
T 3ugc_A           16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN   72 (295)
T ss_dssp             EEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTT
T ss_pred             heeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCC
Confidence            7899999999999984    4467899999997654444344444444444444443

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=97.19  E-value=0.00045  Score=59.35  Aligned_cols=50  Identities=14%  Similarity=0.041  Sum_probs=33.4

Q ss_pred             cEEcccCCceEEEEEEcCC-----Ceeeeeeeecccch-hh---HHHHHHHHHHHhC-CC
Q 047282          116 GKLGQGGFGGVDKGFLRET-----NSFFSNWNVQLKHG-KA---VALCKGLFRDIRN-PT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~-----~~~vavK~i~~~~~-~~---~~~~~~~~~~Ir~-~n  165 (187)
                      ..||+|+||.||+|.....     +..||||.+..... ..   ...+...+..++| ||
T Consensus        70 ~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpn  129 (353)
T 4ase_A           70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN  129 (353)
T ss_dssp             EEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTT
T ss_pred             eEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCc
Confidence            8899999999999987642     25799999865332 22   2333444456655 54

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=97.19  E-value=0.00027  Score=61.25  Aligned_cols=50  Identities=16%  Similarity=0.143  Sum_probs=37.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..||||++...... ...+...++.++|+|-
T Consensus        60 ~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~E~~il~~l~hpni  109 (420)
T 1j1b_A           60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-KNRELQIMRKLDHCNI  109 (420)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEECCTTS-CCHHHHHHHTCCCTTB
T ss_pred             eEEeeCCCEEEEEEEECCCCcEEEEEEecccchh-HHHHHHHHHHcCCCCc
Confidence            7899999999999999887899999998654322 2234555666777663

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=97.18  E-value=0.00038  Score=57.18  Aligned_cols=50  Identities=22%  Similarity=0.218  Sum_probs=35.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhH---HHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAV---ALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~---~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..+|+|.+........   ..+....+.++|+|
T Consensus        26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~   78 (297)
T 3fxz_A           26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN   78 (297)
T ss_dssp             EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTT
T ss_pred             eeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCC
Confidence            789999999999999877789999999865433222   23333444555554

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=97.17  E-value=0.00056  Score=58.44  Aligned_cols=53  Identities=19%  Similarity=0.090  Sum_probs=32.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|....++..+|+|.+..........+..+++.+++-+|++
T Consensus        95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn  147 (373)
T 2x4f_A           95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHAN  147 (373)
T ss_dssp             EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTT
T ss_pred             eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCC
Confidence            67999999999999998878999999997644333334444555444444444

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=97.16  E-value=0.00044  Score=55.83  Aligned_cols=30  Identities=37%  Similarity=0.557  Sum_probs=27.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   54 (287)
T 4f0f_A           25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLIL   54 (287)
T ss_dssp             EECCCCSSSCEEEEEETTTCCEEEEEECCC
T ss_pred             hccccCCceeEEEEEEcCCceEEEEEEeec
Confidence            789999999999999987789999999854

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=97.15  E-value=0.00047  Score=58.12  Aligned_cols=51  Identities=20%  Similarity=0.257  Sum_probs=36.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--------hhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--------GKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--------~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++....++..+|+|.+....        ......+....+.++|+|-
T Consensus        30 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI   88 (351)
T 3c0i_A           30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI   88 (351)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTB
T ss_pred             eEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCC
Confidence            78999999999999998888999999985421        1223344445556666653

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=97.13  E-value=0.00067  Score=55.48  Aligned_cols=51  Identities=20%  Similarity=0.303  Sum_probs=36.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--------hhhHHHHHHHHHHHh---CCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--------GKAVALCKGLFRDIR---NPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--------~~~~~~~~~~~~~Ir---~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|.+....        ......+....+.++   |+|-
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni   76 (308)
T 3g33_A           15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV   76 (308)
T ss_dssp             EEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTB
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCe
Confidence            78999999999999987778999999986422        122334444455555   7764

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=97.12  E-value=0.00073  Score=54.21  Aligned_cols=53  Identities=15%  Similarity=0.160  Sum_probs=36.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|....++..+|+|++.............+++.+++-+|++
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~   67 (277)
T 3f3z_A           15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN   67 (277)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTT
T ss_pred             eEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCC
Confidence            78999999999999998878899999986543333333334444444444443

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=97.11  E-value=0.00032  Score=59.67  Aligned_cols=50  Identities=20%  Similarity=0.126  Sum_probs=36.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|++..+... ...+...++.++|+|-
T Consensus        13 ~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-~~~E~~il~~l~hpnI   62 (383)
T 3eb0_A           13 KTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-KNRELDIMKVLDHVNI   62 (383)
T ss_dssp             EEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-CCHHHHHHTTCCCTTB
T ss_pred             EEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-HHHHHHHHHHcCCCCc
Confidence            7899999999999999888999999998654322 2234555666777664

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=97.11  E-value=0.00084  Score=54.92  Aligned_cols=55  Identities=20%  Similarity=0.075  Sum_probs=36.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPYGG  170 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~~~  170 (187)
                      ..||+|+||.||++....++..+|+|.+.............+++.++.-+|++--
T Consensus        35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   89 (317)
T 2buj_A           35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL   89 (317)
T ss_dssp             EEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBC
T ss_pred             EEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCee
Confidence            8899999999999998777899999998654443333444444444444444433

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=97.11  E-value=0.00061  Score=58.34  Aligned_cols=51  Identities=16%  Similarity=0.102  Sum_probs=36.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch----hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG----KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~----~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|.+.....    .....+....+.++|+|-
T Consensus        15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnI   69 (396)
T 4eut_A           15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNI   69 (396)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTB
T ss_pred             EEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCC
Confidence            789999999999999988889999999865321    222334445556666653

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=97.10  E-value=0.0007  Score=56.36  Aligned_cols=51  Identities=18%  Similarity=0.292  Sum_probs=37.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch---------hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG---------KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~---------~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++....++..+|+|.+.....         .....+...++.++|||-
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i   76 (326)
T 2y0a_A           17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV   76 (326)
T ss_dssp             EEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTB
T ss_pred             eEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCC
Confidence            789999999999999988889999999865321         223344445556666653

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=97.08  E-value=0.00068  Score=58.71  Aligned_cols=51  Identities=20%  Similarity=0.223  Sum_probs=37.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-----------hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-----------KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-----------~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|.+.....           .....+...++.++|+|-
T Consensus       141 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni  202 (419)
T 3i6u_A          141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI  202 (419)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTB
T ss_pred             eEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCE
Confidence            789999999999999988889999999865321           112334455566767664

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=97.08  E-value=0.00076  Score=54.00  Aligned_cols=51  Identities=18%  Similarity=0.152  Sum_probs=39.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGP  167 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~  167 (187)
                      ..||+|+||.||++....++..+|+|.+..... ....+....+.++|+|-.
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~e~~~l~~l~h~~i~   67 (284)
T 2a19_B           17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE-KAEREVKALAKLDHVNIV   67 (284)
T ss_dssp             EEEECSSSCCEEEEEETTTCCEEEEEEEECCSG-GGHHHHHHHHHCCCTTBC
T ss_pred             eeeccCCceEEEEEEEcCCCeEEEEEEeccccH-HHHHHHHHHHhCCCCCEE
Confidence            789999999999999987789999999965432 334455566677777643

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=97.07  E-value=0.00061  Score=60.09  Aligned_cols=30  Identities=13%  Similarity=0.075  Sum_probs=27.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..||+|++..
T Consensus        68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~   97 (464)
T 3ttj_A           68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSR   97 (464)
T ss_dssp             EEEEECSSCEEEEEEETTTTEEEEEEEEES
T ss_pred             EEeecCCCeEEEEEEECCCCCEEEEEEECc
Confidence            789999999999999988899999999965

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=97.07  E-value=0.00066  Score=57.31  Aligned_cols=51  Identities=16%  Similarity=0.143  Sum_probs=33.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc--chhhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK--HGKAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~--~~~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      ..||+|+||.||+|++.+   .+|||.+...  .......+..|++-+++-+|+|-
T Consensus        42 ~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNI   94 (307)
T 3omv_A           42 TRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNI   94 (307)
T ss_dssp             EECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTB
T ss_pred             eEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCE
Confidence            789999999999998753   4899988532  22333444555555555455443

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=97.06  E-value=0.00076  Score=57.17  Aligned_cols=51  Identities=18%  Similarity=0.137  Sum_probs=38.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++....++..+|+|.+.....  .....+....+.++|+|-
T Consensus        26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpni   78 (361)
T 3uc3_A           26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNI   78 (361)
T ss_dssp             EEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTB
T ss_pred             EEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCC
Confidence            789999999999999988889999999965322  233444455566777663

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=97.06  E-value=0.00069  Score=55.84  Aligned_cols=52  Identities=19%  Similarity=0.205  Sum_probs=37.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|...+ +..+|+|++..........+..+++.++.-+|++
T Consensus        45 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~   96 (321)
T 2qkw_B           45 FLIGHGVFGKVYKGVLRD-GAKVALKRRTPESSQGIEEFETEIETLSFCRHPH   96 (321)
T ss_dssp             CCSCBCSSSEEEEEECTT-CCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTT
T ss_pred             ceeecCCCeeEEEEEECC-CCEEEEEEecccChHHHHHHHHHHHHHHhCCCCC
Confidence            779999999999999764 7889999987654444444555555555444444

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=97.05  E-value=0.00085  Score=53.88  Aligned_cols=51  Identities=22%  Similarity=0.315  Sum_probs=36.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc---------hhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH---------GKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~---------~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++....++..+|+|.+....         ......+....+.++|+|-
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   70 (283)
T 3bhy_A           11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI   70 (283)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTB
T ss_pred             HhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCe
Confidence            68999999999999998778999999886432         1223334445556666653

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=97.05  E-value=0.00079  Score=62.99  Aligned_cols=30  Identities=23%  Similarity=0.357  Sum_probs=28.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      .+||+|+||.||+++.+.++..+|+|.+.+
T Consensus       195 k~LG~G~fG~V~la~~~~tg~~~AiK~i~K  224 (689)
T 3v5w_A          195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDK  224 (689)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEH
T ss_pred             EEEecccCeEEEEEEECCCCCEEEEEEEeH
Confidence            889999999999999998899999999965

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=97.05  E-value=0.00014  Score=61.48  Aligned_cols=30  Identities=23%  Similarity=0.235  Sum_probs=25.3

Q ss_pred             cEEcccCCceEEEEEEc---CCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLR---ETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~---~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|+..   .++..+|+|.+..
T Consensus        30 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~   62 (304)
T 3ubd_A           30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKK   62 (304)
T ss_dssp             EEEECGGGCEEEEEEECSSTTTTCEEEEEEEES
T ss_pred             EEEecCCCeEEEEEEEccCCCCCEEEEEEEEeh
Confidence            78999999999999863   3467899999865

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=97.03  E-value=0.00084  Score=56.71  Aligned_cols=51  Identities=14%  Similarity=0.229  Sum_probs=35.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch---h---hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG---K---AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~---~---~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..||+|++.....   .   ....+....+.++|+|-
T Consensus        60 ~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni  116 (348)
T 1u5q_A           60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT  116 (348)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             eEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCE
Confidence            789999999999999877789999999864321   1   12233344455666553

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=97.03  E-value=0.00057  Score=56.94  Aligned_cols=51  Identities=20%  Similarity=0.111  Sum_probs=27.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|++.....  .........+..++|+|-
T Consensus        29 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~ni   81 (360)
T 3e3p_A           29 RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNI   81 (360)
T ss_dssp             ----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTB
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCc
Confidence            789999999999999988789999999854322  222333344456677764

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=97.02  E-value=0.00091  Score=54.55  Aligned_cols=51  Identities=20%  Similarity=0.281  Sum_probs=35.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh-----hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK-----AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~-----~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|++......     ....+....+.++|+|-
T Consensus         9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   64 (311)
T 4agu_A            9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNL   64 (311)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTB
T ss_pred             eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCc
Confidence            6899999999999999888899999988543221     12233444455666553

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=97.02  E-value=0.00091  Score=55.56  Aligned_cols=51  Identities=12%  Similarity=0.138  Sum_probs=36.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh----hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK----AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~----~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|.+......    ....+....+.++|+|-
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   71 (353)
T 2b9h_A           17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI   71 (353)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             eEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCc
Confidence            7899999999999999877899999998643221    22234444555666654

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=97.02  E-value=0.00067  Score=56.48  Aligned_cols=50  Identities=18%  Similarity=0.238  Sum_probs=35.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch----hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG----KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~----~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..+|+|.+.....    .....+....+.++|+|
T Consensus        13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpn   66 (323)
T 3tki_A           13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN   66 (323)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTT
T ss_pred             eEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCC
Confidence            789999999999999987789999999854322    22334444555666665

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=97.01  E-value=0.00072  Score=58.07  Aligned_cols=32  Identities=16%  Similarity=0.171  Sum_probs=25.9

Q ss_pred             cEEcccCCceEEEEEEc---CCCeeeeeeeecccc
Q 047282          116 GKLGQGGFGGVDKGFLR---ETNSFFSNWNVQLKH  147 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~---~~~~~vavK~i~~~~  147 (187)
                      ..||+|+||.||+|+.+   .++..||+|++....
T Consensus        27 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~   61 (361)
T 4f9c_A           27 DKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS   61 (361)
T ss_dssp             EEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS
T ss_pred             EEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc
Confidence            78999999999999864   246789999986543

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=97.01  E-value=0.00094  Score=55.03  Aligned_cols=30  Identities=23%  Similarity=0.351  Sum_probs=27.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      .+||+|+||.||+|....++..+|||++..
T Consensus        63 ~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~   92 (311)
T 3p1a_A           63 SRLGHGSYGEVFKVRSKEDGRLYAVKRSMS   92 (311)
T ss_dssp             EEEEEETTEEEEEEEETTTSCEEEEEEESS
T ss_pred             heeccCCCeEEEEEEECCCCeEEEEEEecc
Confidence            789999999999999987789999998854

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=97.00  E-value=0.00091  Score=56.50  Aligned_cols=31  Identities=16%  Similarity=-0.187  Sum_probs=28.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....++..+|+|.+...
T Consensus        68 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~   98 (371)
T 3q60_A           68 EPLRVGDRSVVFLVRDVERLEDFALKVFTMG   98 (371)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEECC
T ss_pred             eeccCCCCEEEEEEEECCCCceeEEEEEEec
Confidence            8899999999999999877999999999763

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=96.99  E-value=0.00053  Score=58.28  Aligned_cols=51  Identities=14%  Similarity=0.110  Sum_probs=29.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hh---hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GK---AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~---~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..||+|++....  ..   ....+....+.++|+|-
T Consensus        31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI   86 (367)
T 1cm8_A           31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV   86 (367)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTB
T ss_pred             EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCC
Confidence            78999999999999998889999999985422  11   22233344455666553

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=96.99  E-value=0.0011  Score=53.08  Aligned_cols=49  Identities=14%  Similarity=0.243  Sum_probs=35.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|.... +..+|+|.+....  ......+....+.++|+|
T Consensus        16 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~   66 (269)
T 4hcu_A           16 QEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK   66 (269)
T ss_dssp             EEEEECSSCEEEEEEETT-TEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTT
T ss_pred             heecCCCccEEEEEEecC-CCeEEEEEecccccCHHHHHHHHHHHHhCCCCC
Confidence            789999999999999875 7789999986533  223334444555566555

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=96.99  E-value=0.00088  Score=54.30  Aligned_cols=50  Identities=24%  Similarity=0.338  Sum_probs=34.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHH---HHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVAL---CKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~---~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..+|+|.+..........   +......++|+|
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~   77 (302)
T 2j7t_A           25 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY   77 (302)
T ss_dssp             EEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTT
T ss_pred             ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCC
Confidence            77999999999999998878899999986543333333   333444555554

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=96.98  E-value=0.00065  Score=55.57  Aligned_cols=32  Identities=16%  Similarity=0.140  Sum_probs=27.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH  147 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~  147 (187)
                      ..||+|+||.||++....++..+|+|.+....
T Consensus        19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~   50 (316)
T 2ac3_A           19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQP   50 (316)
T ss_dssp             CCCCCCSSEEEEEEECSSSCCEEEEEEEECCS
T ss_pred             ceecCCceEEEEEEEEcCCCcEEEEEEEeeCc
Confidence            56899999999999987778999999996543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=96.98  E-value=0.0007  Score=57.78  Aligned_cols=31  Identities=23%  Similarity=0.251  Sum_probs=28.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++....++..+|+|.+...
T Consensus        18 ~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~   48 (361)
T 2yab_A           18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKR   48 (361)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEBC
T ss_pred             eEEeeCcCEEEEEEEECCCCCEEEEEEEEcc
Confidence            7899999999999999888899999998653

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=96.98  E-value=0.0011  Score=53.84  Aligned_cols=50  Identities=18%  Similarity=0.237  Sum_probs=35.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch----hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG----KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~----~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++....++..+|+|.+.....    .....+....+.++|+|
T Consensus        28 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~   81 (285)
T 3is5_A           28 RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN   81 (285)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTT
T ss_pred             ceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCch
Confidence            889999999999999988788999999865432    22233333444555554

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=96.98  E-value=0.0009  Score=55.25  Aligned_cols=50  Identities=18%  Similarity=0.277  Sum_probs=34.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-----hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-----KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-----~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|.... +..+|+|++.....     .....+....+.++|+|-
T Consensus        27 ~~lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i   81 (311)
T 3niz_A           27 EKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI   81 (311)
T ss_dssp             EEEEECSSCEEEEEEETT-SCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTB
T ss_pred             hhccCCCCeEEEEEEECC-CCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCE
Confidence            789999999999999865 78999999864322     122334445556666653

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=96.96  E-value=0.00043  Score=58.31  Aligned_cols=52  Identities=13%  Similarity=0.091  Sum_probs=37.3

Q ss_pred             cEEcccCCceEEEEE-----EcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCC
Q 047282          116 GKLGQGGFGGVDKGF-----LRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGP  167 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~-----l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~  167 (187)
                      ..||+|+||.||+|.     ...++..+|+|.+..........+....+.+++..++
T Consensus        71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~  127 (365)
T 3e7e_A           71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQH  127 (365)
T ss_dssp             EEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGG
T ss_pred             EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhh
Confidence            789999999999994     3445788999999876665666666666667643343

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=96.96  E-value=0.0011  Score=54.73  Aligned_cols=50  Identities=16%  Similarity=0.232  Sum_probs=36.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch---------hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG---------KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~---------~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++....++..+|+|.+.....         .....+....+.++|+|
T Consensus        18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   76 (321)
T 2a2a_A           18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN   76 (321)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTT
T ss_pred             eEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCC
Confidence            789999999999999988889999999865321         12333444455666665

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=96.96  E-value=0.0007  Score=60.04  Aligned_cols=51  Identities=18%  Similarity=0.284  Sum_probs=37.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..||||.+....  ......+...++.++|+|-
T Consensus       226 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpni  278 (495)
T 1opk_A          226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL  278 (495)
T ss_dssp             EESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTB
T ss_pred             eEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCE
Confidence            78999999999999998778899999996543  2233344455556666653

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=96.96  E-value=0.001  Score=55.00  Aligned_cols=51  Identities=18%  Similarity=0.281  Sum_probs=36.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc-----h---hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH-----G---KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~-----~---~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|.+....     .   .....+....+.++|+|-
T Consensus        32 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni   90 (345)
T 3hko_A           32 GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNI   90 (345)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTB
T ss_pred             ceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCc
Confidence            78999999999999998888899999885431     1   222334444555666553

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=96.95  E-value=0.00097  Score=54.94  Aligned_cols=30  Identities=27%  Similarity=0.281  Sum_probs=27.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus        16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   45 (322)
T 2ycf_A           16 KTLGSGACGEVKLAFERKTCKKVAIKIISK   45 (322)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECC
T ss_pred             eEEecCCCEEEEEEEEcCCCcEEEEEEeeh
Confidence            789999999999999988889999999864

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=96.95  E-value=0.0012  Score=55.39  Aligned_cols=31  Identities=16%  Similarity=0.091  Sum_probs=27.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....++..||+|.+...
T Consensus        21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~   51 (328)
T 3fe3_A           21 KTIGKGNFAKVKLARHILTGREVAIKIIDKT   51 (328)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGG
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEhh
Confidence            7899999999999999877899999998653

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=96.95  E-value=0.001  Score=55.11  Aligned_cols=51  Identities=20%  Similarity=0.243  Sum_probs=38.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc-hhhHHHHHHHHHHH-hCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH-GKAVALCKGLFRDI-RNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~-~~~~~~~~~~~~~I-r~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|.+.... ......+....+.+ +|+|.
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i   67 (330)
T 2izr_A           15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGI   67 (330)
T ss_dssp             EECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTS
T ss_pred             EEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCC
Confidence            78999999999999988789999999986433 23445556666777 67664

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=96.95  E-value=0.00083  Score=54.09  Aligned_cols=50  Identities=18%  Similarity=0.318  Sum_probs=37.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..+|+|.+.....  .....+....+.++|+|
T Consensus        19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~   70 (288)
T 3kfa_A           19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN   70 (288)
T ss_dssp             EESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTT
T ss_pred             eecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCC
Confidence            789999999999999988788999999865432  23334445555666665

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=96.95  E-value=0.0009  Score=54.79  Aligned_cols=51  Identities=12%  Similarity=0.115  Sum_probs=36.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhh---HHHHHHHHHHHh-CCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKA---VALCKGLFRDIR-NPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~---~~~~~~~~~~Ir-~~n~  166 (187)
                      ..||+|+||.||++....++..+|+|.+.......   ...+....+.++ |+|-
T Consensus        34 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~i   88 (337)
T 3ll6_A           34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI   88 (337)
T ss_dssp             EEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTB
T ss_pred             EEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCCh
Confidence            88999999999999998778999999985543322   233344445564 6654

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=96.95  E-value=0.001  Score=55.36  Aligned_cols=51  Identities=20%  Similarity=0.197  Sum_probs=36.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh--hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK--AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~--~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++....++..+|+|.+......  ....+....+.++|||-
T Consensus        11 ~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnI   63 (321)
T 1tki_A           11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNI   63 (321)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTB
T ss_pred             eEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCC
Confidence            6799999999999999888899999998643222  22334445556666653

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=96.95  E-value=0.00094  Score=55.83  Aligned_cols=51  Identities=10%  Similarity=0.103  Sum_probs=36.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hh---hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GK---AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~---~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|.+....  ..   ....+....+.++|+|-
T Consensus        30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   85 (353)
T 3coi_A           30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV   85 (353)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             eeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCc
Confidence            78999999999999998889999999986432  11   22233344445666554

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=96.94  E-value=0.001  Score=56.15  Aligned_cols=50  Identities=12%  Similarity=0.153  Sum_probs=36.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHH-hCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDI-RNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~I-r~~n~  166 (187)
                      ..||+|+||.||++....++..+|+|.+....... ..+...+..+ +|+|-
T Consensus        28 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~E~~~l~~~~~hp~i   78 (342)
T 2qr7_A           28 EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDP-TEEIEILLRYGQHPNI   78 (342)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCC-HHHHHHHHHHTTSTTB
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCCh-HHHHHHHHHhcCCCCc
Confidence            78999999999999998889999999996643322 2333444454 56653

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=96.93  E-value=0.00062  Score=56.30  Aligned_cols=31  Identities=32%  Similarity=0.514  Sum_probs=20.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....++..+|+|.+...
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~   41 (317)
T 2pmi_A           11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLD   41 (317)
T ss_dssp             --------CEEEEEECSSSCCEEEEEEEECC
T ss_pred             eEECCCCCEEEEEEEECCCCcEEEEEEeecc
Confidence            7899999999999998877899999998643

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=96.93  E-value=0.00098  Score=56.60  Aligned_cols=50  Identities=20%  Similarity=0.314  Sum_probs=36.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--h---hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--K---AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~---~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++....++..+|+|.+.....  .   ....+....+.++|||
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpn   89 (362)
T 2bdw_A           35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN   89 (362)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTT
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCC
Confidence            789999999999999988889999999865321  1   2223344445566665

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=96.93  E-value=0.0012  Score=55.80  Aligned_cols=30  Identities=23%  Similarity=0.274  Sum_probs=27.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus        11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~   40 (337)
T 1o6l_A           11 KLLGKGTFGKVILVREKATGRYYAMKILRK   40 (337)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEH
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEeH
Confidence            789999999999999988889999999865

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=96.92  E-value=0.001  Score=56.06  Aligned_cols=51  Identities=10%  Similarity=0.065  Sum_probs=37.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch----hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG----KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~----~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++....++..+|+|++.....    .....+....+.++|+|-
T Consensus        33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni   87 (364)
T 3qyz_A           33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI   87 (364)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             EEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCC
Confidence            789999999999999887889999999864222    222344445556777664

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=96.92  E-value=0.0011  Score=52.98  Aligned_cols=30  Identities=13%  Similarity=0.216  Sum_probs=27.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus        12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   41 (279)
T 2w5a_A           12 YTIGTGSYGRCQKIRRKSDGKILVWKELDY   41 (279)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEEC
T ss_pred             hhccCCCCcEEEEEEECCCCcEEEEEEEEc
Confidence            789999999999999987789999999864

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=96.92  E-value=0.0012  Score=53.02  Aligned_cols=50  Identities=20%  Similarity=0.314  Sum_probs=35.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--h---hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--K---AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~---~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..+|+|.+.....  .   ....+....+.++|+|
T Consensus        12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~   66 (284)
T 3kk8_A           12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN   66 (284)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTT
T ss_pred             hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCC
Confidence            789999999999999988889999999865321  1   1223333445566655

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=96.91  E-value=0.00097  Score=58.63  Aligned_cols=50  Identities=14%  Similarity=0.132  Sum_probs=36.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch------hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG------KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~------~~~~~~~~~~~~Ir~~n  165 (187)
                      .+||+|+||.||++....++..+|+|.+.....      .....+......++|+|
T Consensus        80 ~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~  135 (437)
T 4aw2_A           80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW  135 (437)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTT
T ss_pred             EEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCC
Confidence            789999999999999998889999999865221      11333444455566665

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=96.91  E-value=0.00093  Score=58.20  Aligned_cols=51  Identities=14%  Similarity=0.093  Sum_probs=36.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc------hhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH------GKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~------~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++....++..+|+|.+....      ......+......++|||-
T Consensus        75 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~I  131 (410)
T 3v8s_A           75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV  131 (410)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTB
T ss_pred             EEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCC
Confidence            78999999999999998888999999986421      1123344445556666653

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=96.91  E-value=0.0014  Score=56.37  Aligned_cols=53  Identities=19%  Similarity=0.180  Sum_probs=36.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|....++..+|+|.+.............+++.++.-+|++
T Consensus        57 ~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpn  109 (387)
T 1kob_A           57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK  109 (387)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTT
T ss_pred             EEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcC
Confidence            78999999999999998888999999987643333333344444444444443

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=96.90  E-value=0.00097  Score=55.62  Aligned_cols=51  Identities=22%  Similarity=0.222  Sum_probs=37.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-----hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-----KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-----~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|++.....     .....+....+.++|+|-
T Consensus        23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   78 (351)
T 3mi9_A           23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV   78 (351)
T ss_dssp             EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTB
T ss_pred             EEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCc
Confidence            789999999999999987789999998854322     123344555666777664

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=96.90  E-value=0.0011  Score=54.01  Aligned_cols=51  Identities=18%  Similarity=0.144  Sum_probs=36.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh---hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK---AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~---~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++....++..+|+|.+......   ....+....+.++|+|-
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i   68 (304)
T 2jam_A           15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENI   68 (304)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTB
T ss_pred             eeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCe
Confidence            7899999999999999877899999998654322   23334445556666653

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=96.90  E-value=0.00054  Score=57.43  Aligned_cols=31  Identities=26%  Similarity=0.232  Sum_probs=27.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....++..+|+|.+...
T Consensus        30 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~   60 (335)
T 3dls_A           30 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKE   60 (335)
T ss_dssp             EECSSSSSCSEEEEEETTTTEEEEEEEEEST
T ss_pred             eEEEecCCEEEEEEEECCCCcEEEEEEEehh
Confidence            7899999999999998888999999998653

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=96.90  E-value=0.0017  Score=52.52  Aligned_cols=30  Identities=17%  Similarity=0.139  Sum_probs=27.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus        23 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   52 (298)
T 1phk_A           23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDV   52 (298)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEET
T ss_pred             eeecCCCceEEEEEEEcCcCceEEEEEEec
Confidence            789999999999999988889999999854

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=96.90  E-value=0.00061  Score=57.96  Aligned_cols=30  Identities=30%  Similarity=0.500  Sum_probs=27.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..||+|.+..
T Consensus       120 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~  149 (377)
T 3cbl_A          120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRE  149 (377)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEECCT
T ss_pred             eEeccCCCCeEEEEEEecCCeEEEEEEccc
Confidence            889999999999999987788999999864

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=96.90  E-value=0.00091  Score=53.67  Aligned_cols=30  Identities=23%  Similarity=0.211  Sum_probs=27.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus        17 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~   46 (278)
T 3cok_A           17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDK   46 (278)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEH
T ss_pred             eeecCCCceEEEEEEEccCCceEEEEEeeh
Confidence            789999999999999877789999999864

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=96.89  E-value=0.0014  Score=52.24  Aligned_cols=31  Identities=29%  Similarity=0.392  Sum_probs=27.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....++..+|+|.+...
T Consensus        13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   43 (276)
T 2yex_A           13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK   43 (276)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEEGG
T ss_pred             EEeecCCCcEEEEEEECCCCcEEEEEEeeec
Confidence            6799999999999999877889999998643

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=96.89  E-value=0.00067  Score=57.16  Aligned_cols=51  Identities=18%  Similarity=0.154  Sum_probs=34.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|.+..... .....+......++|+|-
T Consensus        59 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~ni  110 (349)
T 2w4o_A           59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNI  110 (349)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTB
T ss_pred             eEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCC
Confidence            789999999999999988788999999865332 223334445556666653

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=96.89  E-value=0.0015  Score=55.33  Aligned_cols=31  Identities=32%  Similarity=0.486  Sum_probs=28.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++....++..+|+|.+...
T Consensus        23 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~   53 (345)
T 1xjd_A           23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKD   53 (345)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEEHH
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEhH
Confidence            7899999999999999888999999999653

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=96.89  E-value=0.00086  Score=55.70  Aligned_cols=31  Identities=32%  Similarity=0.424  Sum_probs=27.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++....++..+|+|.+...
T Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~   70 (329)
T 3gbz_A           40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLE   70 (329)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEECCCC
T ss_pred             EEEEecCCeEEEEEEECCCCceEEEEEEccc
Confidence            7899999999999998888999999998643

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=96.88  E-value=0.0015  Score=52.64  Aligned_cols=53  Identities=19%  Similarity=0.078  Sum_probs=35.0

Q ss_pred             cEEcccCCceEEEEEEcCCC-------eeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETN-------SFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~-------~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|....++       ..+|+|.+..........+..+++.+++-++++
T Consensus        14 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~   73 (289)
T 4fvq_A           14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKH   73 (289)
T ss_dssp             EEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTT
T ss_pred             eeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCC
Confidence            78999999999999987644       469999986544433333444444444433433

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=96.88  E-value=0.0013  Score=52.75  Aligned_cols=49  Identities=18%  Similarity=0.309  Sum_probs=35.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|...+ +..+|+|.+....  ......+....+.++|+|
T Consensus        19 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~   69 (279)
T 1qpc_A           19 ERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQR   69 (279)
T ss_dssp             EEEEEETTEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTT
T ss_pred             eeecCCCCeEEEEEEEcC-CcEEEEEEecCCcccHHHHHHHHHHHHhCCCcC
Confidence            789999999999999875 6789999986532  223344445555666665

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=96.87  E-value=0.0012  Score=55.99  Aligned_cols=51  Identities=12%  Similarity=0.138  Sum_probs=36.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--h---hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--G---KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~---~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|.+....  .   .....+....+.++|+|-
T Consensus        48 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni  103 (371)
T 4exu_A           48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV  103 (371)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCc
Confidence            78999999999999998889999999986532  1   122233444555666654

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=96.87  E-value=0.0013  Score=55.76  Aligned_cols=51  Identities=10%  Similarity=-0.033  Sum_probs=35.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hh---hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GK---AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~---~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|.+....  ..   ....+....+.++|+|-
T Consensus        31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpni   86 (371)
T 2xrw_A           31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI   86 (371)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             eeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCc
Confidence            78999999999999988788999999986422  11   22233344455666653

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=96.87  E-value=0.0014  Score=52.21  Aligned_cols=49  Identities=16%  Similarity=0.161  Sum_probs=35.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++.... +..+|+|.+....  ......+....+.++|+|
T Consensus        14 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~   64 (268)
T 3sxs_A           14 KELGSGQFGVVKLGKWKG-QYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPK   64 (268)
T ss_dssp             EEEEEETTEEEEEEEETT-TEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTT
T ss_pred             eeeccCCCceEEEEEecC-ceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCC
Confidence            789999999999998875 6789999986533  233344445555666665

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=96.86  E-value=0.001  Score=56.44  Aligned_cols=50  Identities=14%  Similarity=0.171  Sum_probs=32.8

Q ss_pred             cEEcccCCceEEEEEEc-----CCCeeeeeeeecccc-hh---hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLR-----ETNSFFSNWNVQLKH-GK---AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~-----~~~~~vavK~i~~~~-~~---~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|...     .++..||||++.... ..   ....+...+..++|+|
T Consensus        77 ~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpn  135 (367)
T 3l9p_A           77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN  135 (367)
T ss_dssp             EECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTT
T ss_pred             eEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCC
Confidence            78999999999999953     346689999985432 22   2223333445566665

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=96.85  E-value=0.0012  Score=54.80  Aligned_cols=50  Identities=18%  Similarity=0.243  Sum_probs=35.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh--h---HHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK--A---VALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~--~---~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++....++..+|+|.+......  .   ...+....+.++|+|
T Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   85 (331)
T 4aaa_A           31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHEN   85 (331)
T ss_dssp             EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTT
T ss_pred             eEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCC
Confidence            7899999999999999888899999998543221  1   223334445566655

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=96.84  E-value=0.0016  Score=57.27  Aligned_cols=51  Identities=22%  Similarity=0.217  Sum_probs=37.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc-----hhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH-----GKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~-----~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++....++..+|+|.+....     ......+...++.++|||-
T Consensus        28 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpni   83 (486)
T 3mwu_A           28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI   83 (486)
T ss_dssp             EEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTB
T ss_pred             EEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCc
Confidence            78999999999999998778999999985421     2233344455566666653

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=96.84  E-value=0.002  Score=52.01  Aligned_cols=53  Identities=13%  Similarity=0.079  Sum_probs=38.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc-hhhHHHHHHHHHHH-hCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH-GKAVALCKGLFRDI-RNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~-~~~~~~~~~~~~~I-r~~n~~~  168 (187)
                      ..||+|+||.||+|....++..+|+|.+.... ......+....+.+ +|++...
T Consensus        16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~   70 (298)
T 1csn_A           16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPN   70 (298)
T ss_dssp             EEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCC
T ss_pred             EEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCe
Confidence            78999999999999987779999999986432 23344455556666 5666543

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=96.84  E-value=0.0011  Score=53.31  Aligned_cols=30  Identities=20%  Similarity=0.217  Sum_probs=27.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~   44 (279)
T 3fdn_A           15 RPLGKGKFGNVYLAREKQSKFILALKVLFK   44 (279)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEH
T ss_pred             eEEecCCCeEEEEEEEccCCcEEEEEEEec
Confidence            789999999999999988888999999854

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=96.83  E-value=0.001  Score=57.00  Aligned_cols=52  Identities=17%  Similarity=0.287  Sum_probs=32.7

Q ss_pred             cEEcccCCceEEEEEEcC--CCeeeeeeeecccc-hhhHHHHHHHHHHHhCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE--TNSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTGP  167 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~--~~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~  167 (187)
                      .+||+|+||.||+|...+  ++..+|+|.+.... ......+...++.++|+|-.
T Consensus        27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv   81 (405)
T 3rgf_A           27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVI   81 (405)
T ss_dssp             CCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBC
T ss_pred             cEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCee
Confidence            679999999999999763  46789999996533 22344455566677777643

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=96.83  E-value=0.0022  Score=51.46  Aligned_cols=52  Identities=17%  Similarity=0.225  Sum_probs=35.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|....++..+|+|.+.... ........+++.++.-+|++
T Consensus        12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~   63 (303)
T 1zy4_A           12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQY   63 (303)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTT
T ss_pred             heeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchH
Confidence            67999999999999988778999999986432 22233334444444444444

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=96.83  E-value=0.0023  Score=51.36  Aligned_cols=31  Identities=19%  Similarity=0.296  Sum_probs=26.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++....++..+|+|.+...
T Consensus        13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   43 (290)
T 3fme_A           13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRAT   43 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEC--
T ss_pred             HhcCCCCCeEEEEEEecCCCeEEEEEEeecc
Confidence            7899999999999999877899999998653

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=96.83  E-value=0.0015  Score=54.57  Aligned_cols=51  Identities=22%  Similarity=0.053  Sum_probs=37.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGP  167 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~  167 (187)
                      .+||+|+||.||+|....++..+|+|.+.... ....+.....+.++|+|..
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~e~~~~~~~~~h~~i~   85 (336)
T 3fhr_A           35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-KARQEVDHHWQASGGPHIV   85 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEESSH-HHHHHHHHHHHHTTSTTBC
T ss_pred             eeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-HHHHHHHHHHHhcCCCChH
Confidence            56899999999999998878999999986532 2333344445566776654

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=96.83  E-value=0.002  Score=56.04  Aligned_cols=49  Identities=18%  Similarity=0.281  Sum_probs=37.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNP  164 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~  164 (187)
                      ..||+|+||.||+|....++..||||.+.....  .....+...++.+++.
T Consensus       103 ~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~  153 (429)
T 3kvw_A          103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQ  153 (429)
T ss_dssp             EEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhc
Confidence            789999999999999988889999999965432  2333455566677665

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=96.82  E-value=0.0013  Score=53.17  Aligned_cols=31  Identities=26%  Similarity=0.358  Sum_probs=26.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....++..+|+|.+...
T Consensus         9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   39 (299)
T 2r3i_A            9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD   39 (299)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEC---
T ss_pred             hhhccCCCeeEEEEEEcCCCceEEEEEeecC
Confidence            6799999999999999877899999998643

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=96.82  E-value=0.0013  Score=57.46  Aligned_cols=49  Identities=16%  Similarity=0.194  Sum_probs=34.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|.... +..||||.+.....  .....+...++.++|+|
T Consensus       194 ~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~  244 (454)
T 1qcf_A          194 KKLGAGQFGEVWMATYNK-HTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDK  244 (454)
T ss_dssp             EEEECCSSEEEEEEEETT-TEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTT
T ss_pred             EEcccCCceEEEEEEECC-ccEEEEEEecCCCccHHHHHHHHHHHhhCCCCC
Confidence            789999999999999875 67899999965332  22333333444555554

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=96.82  E-value=0.0018  Score=52.20  Aligned_cols=51  Identities=16%  Similarity=0.219  Sum_probs=39.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|.+..... .....+....+.++|++.
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~   66 (296)
T 3uzp_A           15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVG   66 (296)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTT
T ss_pred             EEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCC
Confidence            789999999999999877799999998865332 344555666777887664

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=96.82  E-value=0.0014  Score=52.71  Aligned_cols=49  Identities=16%  Similarity=0.148  Sum_probs=31.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++.... +..+|+|.+....  ......+....+.++|+|
T Consensus        30 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~   80 (283)
T 3gen_A           30 KELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEK   80 (283)
T ss_dssp             EECC---CEEEEEEEETT-TEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTT
T ss_pred             hhcCCCCCceEEEEEEcC-CCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCC
Confidence            789999999999999875 7789999996543  223333444444555554

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=96.82  E-value=0.002  Score=53.15  Aligned_cols=53  Identities=15%  Similarity=0.173  Sum_probs=36.5

Q ss_pred             cEEcccCCceEEEEEE----cCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFL----RETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l----~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||++..    ..++..+|+|.+..........+..+++.++.-++++
T Consensus        47 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~  103 (326)
T 2w1i_A           47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN  103 (326)
T ss_dssp             EEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTT
T ss_pred             eeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCC
Confidence            7899999999999984    3457899999997654444444444555444444443

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=96.82  E-value=0.0014  Score=52.18  Aligned_cols=30  Identities=27%  Similarity=0.356  Sum_probs=27.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   46 (289)
T 1x8b_A           17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKK   46 (289)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC
T ss_pred             hhhcCCCceEEEEEEEcCCCceEEEEEecc
Confidence            789999999999999987789999999864

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=96.81  E-value=0.0019  Score=54.72  Aligned_cols=30  Identities=20%  Similarity=0.192  Sum_probs=27.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..||||.+..
T Consensus       100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~  129 (365)
T 2y7j_A          100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEV  129 (365)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEET
T ss_pred             eEEecCCCEEEEEEEECCCCcEEEEEEEEc
Confidence            789999999999999987789999998854

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=96.81  E-value=0.0019  Score=51.90  Aligned_cols=51  Identities=16%  Similarity=0.217  Sum_probs=38.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc-hhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|.+.... ......+....+.++|++.
T Consensus        15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~   66 (296)
T 4hgt_A           15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVG   66 (296)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTT
T ss_pred             eeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCC
Confidence            78999999999999987778999999875432 2344455566677877664

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=96.81  E-value=0.0016  Score=53.71  Aligned_cols=49  Identities=16%  Similarity=0.225  Sum_probs=34.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHH--HhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRD--IRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~--Ir~~n~  166 (187)
                      ..||+|+||.||+|...  +..+|+|.+..........+......  ++|+|-
T Consensus        48 ~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni   98 (342)
T 1b6c_B           48 ESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFREAEIYQTVMLRHENI   98 (342)
T ss_dssp             EEEEEETTEEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTB
T ss_pred             eeecCCCCcEEEEEEEc--CccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcE
Confidence            78999999999999974  78999999976544333333333333  566653

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=96.80  E-value=0.0014  Score=53.47  Aligned_cols=50  Identities=22%  Similarity=0.401  Sum_probs=31.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..+|+|.+..... .....+....+.++|+|
T Consensus        35 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~   85 (314)
T 3com_A           35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPH   85 (314)
T ss_dssp             EECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTT
T ss_pred             eeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCC
Confidence            789999999999999988789999999865332 23333444444555554

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=96.80  E-value=0.0017  Score=53.80  Aligned_cols=29  Identities=21%  Similarity=0.307  Sum_probs=25.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|+.  ++..+|+|.+...
T Consensus        26 ~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~   54 (336)
T 2vuw_A           26 EKIGEGVFGEVFQTIA--DHTPVAIKIIAIE   54 (336)
T ss_dssp             EEEEEETTEEEEEEEE--TTEEEEEEEEEES
T ss_pred             eeecccCceEEEEEEe--CCceEEEEEEecC
Confidence            7899999999999987  4789999999654

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=96.80  E-value=0.001  Score=56.18  Aligned_cols=30  Identities=23%  Similarity=0.241  Sum_probs=27.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus        15 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~   44 (336)
T 3h4j_B           15 ETLGEGSFGKVKLATHYKTQQKVALKFISR   44 (336)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEH
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEeh
Confidence            789999999999999987889999999864

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=96.78  E-value=0.002  Score=53.20  Aligned_cols=53  Identities=15%  Similarity=0.213  Sum_probs=36.3

Q ss_pred             cEEcccCCceEEEEEE----cCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFL----RETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l----~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||++..    ..++..+|+|.+.............+++.++.-++++
T Consensus        29 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~   85 (327)
T 3lxl_A           29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF   85 (327)
T ss_dssp             EEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTT
T ss_pred             hhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCc
Confidence            7899999999999984    4457889999997654444333444444444444443

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=96.78  E-value=0.0018  Score=53.24  Aligned_cols=49  Identities=20%  Similarity=0.219  Sum_probs=34.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++...  +..+|+|.+..... .....+....+.++|+|-
T Consensus        14 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~i   63 (307)
T 2eva_A           14 EVVGRGAFGVVCKAKWR--AKDVAIKQIESESERKAFIVELRQLSRVNHPNI   63 (307)
T ss_dssp             EEEECCSSSEEEEEEET--TEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTB
T ss_pred             eEeecCCCceEEEEEEC--CeeEEEEEecChhHHHHHHHHHHHHhcCCCCCc
Confidence            78999999999999975  57899999965332 223334444555666653

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=96.78  E-value=0.0019  Score=53.02  Aligned_cols=53  Identities=11%  Similarity=-0.016  Sum_probs=37.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch---hhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG---KAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~---~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||++....++..+|+|.+.....   .....+..+++.++.-+|++
T Consensus        18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~   73 (311)
T 3ork_A           18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA   73 (311)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTT
T ss_pred             EEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCC
Confidence            789999999999999887789999999865322   22233444555455445544

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=96.77  E-value=0.00085  Score=56.87  Aligned_cols=30  Identities=20%  Similarity=-0.011  Sum_probs=26.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|||.+..
T Consensus        79 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~  108 (377)
T 3byv_A           79 TVLGQEDPYAYLEATDQETGESFEVHVPYF  108 (377)
T ss_dssp             EEEEEETTEEEEEEEC-CCCCEEEEEEEEE
T ss_pred             ceeecCCCEEEEEEEECCCCcEEEEEEEee
Confidence            889999999999999877789999999864

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=96.77  E-value=0.0012  Score=56.19  Aligned_cols=30  Identities=30%  Similarity=0.317  Sum_probs=20.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|++..
T Consensus        15 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~   44 (388)
T 3oz6_A           15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFD   44 (388)
T ss_dssp             EC-------CEEEEEETTTCCEEEEEEECC
T ss_pred             EEeeeCCCeEEEEEEECCCCCEEEEEEecc
Confidence            679999999999999988889999999854

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=96.77  E-value=0.0015  Score=57.82  Aligned_cols=30  Identities=23%  Similarity=0.158  Sum_probs=25.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus        42 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~   71 (504)
T 3q5i_A           42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKK   71 (504)
T ss_dssp             EEEEC--CEEEEEEEETTTCCEEEEEEEEC
T ss_pred             eEecccCCeEEEEEEECCCCcEEEEEEEEh
Confidence            889999999999999988888999999865

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=96.76  E-value=0.0012  Score=53.55  Aligned_cols=29  Identities=28%  Similarity=0.391  Sum_probs=25.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|... ++..+|+|++..
T Consensus         8 ~~lg~G~~g~V~~~~~~-~~~~~aiK~~~~   36 (288)
T 1ob3_A            8 EKIGEGTYGVVYKAQNN-YGETFALKKIRL   36 (288)
T ss_dssp             EEEEEETTEEEEEEEET-TSCEEEEEEECC
T ss_pred             hhcccCCCEEEEEEEcC-CCCEEEEEEEec
Confidence            67999999999999984 478899999854

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=96.76  E-value=0.0013  Score=57.28  Aligned_cols=50  Identities=8%  Similarity=0.109  Sum_probs=27.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hh---hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GK---AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~---~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..||||++....  ..   ....+...++.++|+|
T Consensus        59 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~n  113 (458)
T 3rp9_A           59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDH  113 (458)
T ss_dssp             CC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTT
T ss_pred             eEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCC
Confidence            78999999999999988778999999985421  11   2223444455566655

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=96.76  E-value=0.0016  Score=56.75  Aligned_cols=30  Identities=17%  Similarity=0.278  Sum_probs=27.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+.+
T Consensus        67 ~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k   96 (412)
T 2vd5_A           67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNK   96 (412)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEH
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEeH
Confidence            789999999999999988899999999865

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=96.75  E-value=0.0031  Score=50.91  Aligned_cols=53  Identities=21%  Similarity=0.175  Sum_probs=35.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|....++..+|+|.+....  .........++..++.-+|++
T Consensus        32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~   86 (290)
T 1t4h_A           32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPN   86 (290)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTT
T ss_pred             eeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCC
Confidence            67999999999999998888899999986432  222233344444444444443

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=96.75  E-value=0.0012  Score=55.12  Aligned_cols=47  Identities=17%  Similarity=0.302  Sum_probs=34.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHh
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIR  162 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir  162 (187)
                      ..||+|+||.||+|....++..+|+|.+.....  .....+...++.++
T Consensus        41 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~   89 (360)
T 3llt_A           41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQ   89 (360)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTC
T ss_pred             EEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhc
Confidence            789999999999999987788999999864222  22333444555565

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=96.74  E-value=0.0016  Score=52.02  Aligned_cols=30  Identities=27%  Similarity=0.235  Sum_probs=27.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~   46 (276)
T 2h6d_A           17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNR   46 (276)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEH
T ss_pred             eeecCCCCeEEEEEEECCCCceEEEEEecc
Confidence            789999999999999987789999999865

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=96.74  E-value=0.0019  Score=56.44  Aligned_cols=50  Identities=22%  Similarity=0.201  Sum_probs=36.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|.... +..||||.+....  ......+...++.++|+|-
T Consensus       190 ~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~i  241 (452)
T 1fmk_A          190 VKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL  241 (452)
T ss_dssp             EEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTB
T ss_pred             eeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCE
Confidence            789999999999999976 5779999986533  2233444555666777663

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=96.74  E-value=0.0013  Score=54.92  Aligned_cols=51  Identities=24%  Similarity=0.321  Sum_probs=34.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--------hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--------KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--------~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|.+.....        .....+....+.++|+|-
T Consensus        16 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   74 (346)
T 1ua2_A           16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNI   74 (346)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTB
T ss_pred             eEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCC
Confidence            789999999999999987789999999864221        122234445556666653

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=96.73  E-value=0.003  Score=51.46  Aligned_cols=30  Identities=23%  Similarity=0.226  Sum_probs=25.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus        38 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~   67 (310)
T 2wqm_A           38 KKIGRGQFSEVYRAACLLDGVPVALKKVQI   67 (310)
T ss_dssp             EEEECC--CEEEEEEETTTCCEEEEEEECT
T ss_pred             EeecCCCCceEEEEEEcCCCceEEEEeeeh
Confidence            789999999999999877789999999864

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=96.73  E-value=0.0017  Score=57.00  Aligned_cols=50  Identities=16%  Similarity=0.240  Sum_probs=34.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-----hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-----KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-----~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++....++..+|+|.+.....     .....+...++.++|||
T Consensus        17 ~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpn   71 (444)
T 3soa_A           17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPN   71 (444)
T ss_dssp             EEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTT
T ss_pred             EEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcC
Confidence            789999999999999988899999999865331     12233344455566665

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=96.72  E-value=0.0017  Score=53.54  Aligned_cols=32  Identities=22%  Similarity=0.323  Sum_probs=26.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK  149 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~  149 (187)
                      ..||+|+||.||+|...  +..+|+|.+......
T Consensus        19 ~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~   50 (336)
T 3g2f_A           19 ELIGRGRYGAVYKGSLD--ERPVAVKVFSFANRQ   50 (336)
T ss_dssp             EEEEECSSEEEEEEEET--TEEEEEEEEEGGGHH
T ss_pred             eecccCCCeEEEEEEEC--CeEEEEEEeeccchh
Confidence            78999999999999873  689999999754443

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=96.72  E-value=0.0015  Score=54.74  Aligned_cols=50  Identities=22%  Similarity=0.204  Sum_probs=37.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|+...++..+|+|.+.....  .....+...++.++|++
T Consensus        43 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~   94 (397)
T 1wak_A           43 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSD   94 (397)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSC
T ss_pred             EEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcC
Confidence            789999999999999888889999999965322  23344555666776544

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=96.72  E-value=0.0025  Score=52.66  Aligned_cols=50  Identities=14%  Similarity=0.046  Sum_probs=33.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|...  +..||||.+....... ...+.++..+++-+|++
T Consensus        30 ~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~-~~~~~E~~~l~~l~hpn   79 (322)
T 3soc_A           30 EVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQS-WQNEYEVYSLPGMKHEN   79 (322)
T ss_dssp             EEEECSTTCEEEEEEET--TEEEEEEEECGGGHHH-HHHHHHHHTSTTCCCTT
T ss_pred             heecccCceEEEEEEEC--CCEEEEEEeecCchHH-HHHHHHHHHHhcCCCCC
Confidence            78999999999999875  6889999996543322 22333444444444444

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=96.72  E-value=0.0014  Score=54.70  Aligned_cols=29  Identities=21%  Similarity=0.140  Sum_probs=25.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|.... +..+|+|++..
T Consensus        28 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~   56 (362)
T 3pg1_A           28 RFISSGSYGAVCAGVDSE-GIPVAIKRVFN   56 (362)
T ss_dssp             EEEEEETTEEEEEEECTT-SCEEEEEEECE
T ss_pred             EEeccCCCEEEEEEECCC-CCeEEEEeccc
Confidence            789999999999999876 88999999854

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=96.72  E-value=0.0029  Score=51.12  Aligned_cols=31  Identities=26%  Similarity=0.237  Sum_probs=27.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++....++..+|+|.+...
T Consensus        21 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~   51 (294)
T 2rku_A           21 RFLGKGGFAKCFEISDADTKEVFAGKIVPKS   51 (294)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGG
T ss_pred             EEEeecCCEEEEEEEECCCCceEEEEEechh
Confidence            7899999999999999888889999988653

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=96.71  E-value=0.0017  Score=53.93  Aligned_cols=50  Identities=16%  Similarity=0.098  Sum_probs=33.3

Q ss_pred             cEEcccCCceEEEEEE-----cCCCeeeeeeeecccch-hh---HHHHHHHHHHH-hCCC
Q 047282          116 GKLGQGGFGGVDKGFL-----RETNSFFSNWNVQLKHG-KA---VALCKGLFRDI-RNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l-----~~~~~~vavK~i~~~~~-~~---~~~~~~~~~~I-r~~n  165 (187)
                      ..||+|+||.||+|..     ..++..+|||.+..... ..   ...+......+ +|+|
T Consensus        28 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpn   87 (359)
T 3vhe_A           28 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN   87 (359)
T ss_dssp             EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTT
T ss_pred             eeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcc
Confidence            7899999999999984     33457899999965322 22   23334444455 4555

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=96.71  E-value=0.0022  Score=51.66  Aligned_cols=30  Identities=20%  Similarity=0.202  Sum_probs=27.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus        20 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~   49 (284)
T 2vgo_A           20 RPLGKGKFGNVYLAREKQNKFIMALKVLFK   49 (284)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEH
T ss_pred             heecCCCCeEEEEEEEcCCCcEEEEEEEcc
Confidence            789999999999999988788999999854

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=96.71  E-value=0.00071  Score=56.08  Aligned_cols=50  Identities=24%  Similarity=0.429  Sum_probs=34.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh----hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK----AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~----~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..+|+|.+......    ....+....+.++|+|
T Consensus         8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~   61 (324)
T 3mtl_A            8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN   61 (324)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTT
T ss_pred             EEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCC
Confidence            6799999999999999877889999998643221    1122334445555554

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=96.71  E-value=0.0019  Score=55.01  Aligned_cols=51  Identities=14%  Similarity=0.129  Sum_probs=31.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hh---hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GK---AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~---~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..||+|++....  ..   ....+...++.++|+|-
T Consensus        35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI   90 (367)
T 2fst_X           35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV   90 (367)
T ss_dssp             EECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             eEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCC
Confidence            78999999999999988889999999985421  11   22233344455666553

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=96.70  E-value=0.0027  Score=52.68  Aligned_cols=53  Identities=15%  Similarity=0.015  Sum_probs=33.8

Q ss_pred             cEEcccCCceEEEEEEcCC---Ceeeeeeeecccc-hhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRET---NSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~---~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|....+   +..+|||.+.... ......+..+++.+++-+|++
T Consensus        55 ~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~  111 (325)
T 3kul_A           55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPN  111 (325)
T ss_dssp             EEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTT
T ss_pred             eEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence            7899999999999998643   3459999986532 222233334444444444443

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=96.70  E-value=0.0017  Score=53.27  Aligned_cols=31  Identities=19%  Similarity=0.200  Sum_probs=26.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG  148 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~  148 (187)
                      ..||+|+||.||+|...  +..+|+|.+.....
T Consensus        43 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~   73 (337)
T 3mdy_A           43 KQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEE   73 (337)
T ss_dssp             EEEEEETTEEEEEEEET--TEEEEEEEEEGGGH
T ss_pred             eEeecCCCeEEEEEEEC--CceEEEEEEecccc
Confidence            88999999999999975  68899999865443

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=96.68  E-value=0.0022  Score=55.61  Aligned_cols=50  Identities=14%  Similarity=0.153  Sum_probs=35.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--h---hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--G---KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~---~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..||||++....  .   .....+...++.++|+|
T Consensus        32 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n   86 (432)
T 3n9x_A           32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY   86 (432)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTT
T ss_pred             EEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCC
Confidence            78999999999999998889999999996421  1   12223344455566655

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=96.68  E-value=0.0028  Score=51.36  Aligned_cols=53  Identities=21%  Similarity=0.103  Sum_probs=36.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch----hhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG----KAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~----~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||++....++..+|+|.+.....    ........+++.++.-+|++
T Consensus        11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   67 (305)
T 2wtk_C           11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKN   67 (305)
T ss_dssp             CEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTT
T ss_pred             eEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCC
Confidence            789999999999999987788999999865321    12233344444444444444

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=96.67  E-value=0.0022  Score=50.89  Aligned_cols=49  Identities=14%  Similarity=0.224  Sum_probs=34.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++.... +..+|+|.+.....  .....+....+.++|+|
T Consensus        14 ~~lg~G~~g~V~~~~~~~-~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~   64 (267)
T 3t9t_A           14 QEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK   64 (267)
T ss_dssp             EEEEEETTEEEEEEEETT-TEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTT
T ss_pred             eEecCCCceeEEEEEecC-CCeEEEEEccccCCCHHHHHHHHHHHHhCCCCC
Confidence            789999999999999875 77899999965432  22333334444555554

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=96.67  E-value=0.0026  Score=51.65  Aligned_cols=31  Identities=32%  Similarity=0.476  Sum_probs=27.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....++..+|+|.+...
T Consensus        28 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~   58 (303)
T 3a7i_A           28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE   58 (303)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEETT
T ss_pred             hhhcccCCeEEEEEEECCCCcEEEEEEeccc
Confidence            7899999999999998877889999998643

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=96.67  E-value=0.0017  Score=57.19  Aligned_cols=30  Identities=23%  Similarity=0.112  Sum_probs=24.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus        43 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~   72 (494)
T 3lij_A           43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRK   72 (494)
T ss_dssp             EEEECC---EEEEEEETTTCCEEEEEEEEC
T ss_pred             eEEecCCCEEEEEEEECCCCcEEEEEEEec
Confidence            789999999999999988788999999864

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=96.67  E-value=0.0029  Score=51.65  Aligned_cols=53  Identities=13%  Similarity=0.024  Sum_probs=35.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc---hhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH---GKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~---~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||++....++..+|+|.+....   ......+..+++.+++-+|++
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~   72 (294)
T 4eqm_A           17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN   72 (294)
T ss_dssp             EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTT
T ss_pred             EEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCC
Confidence            78999999999999988778899999985422   222233344444444444443

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=96.66  E-value=0.0027  Score=55.00  Aligned_cols=31  Identities=19%  Similarity=0.304  Sum_probs=28.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      .+||+|+||.||+++...++..+|+|.+...
T Consensus        58 ~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~   88 (396)
T 4dc2_A           58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKE   88 (396)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEGG
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEhh
Confidence            7899999999999999988899999998653

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=96.65  E-value=0.0027  Score=52.08  Aligned_cols=51  Identities=14%  Similarity=0.174  Sum_probs=36.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHH-hCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDI-RNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~I-r~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|.+....  ......+...++.+ +|+|-
T Consensus        30 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i   83 (326)
T 2x7f_A           30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNI   83 (326)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTB
T ss_pred             EEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCe
Confidence            78999999999999998778899999986432  22333444455566 56653

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=96.64  E-value=0.0024  Score=51.63  Aligned_cols=30  Identities=30%  Similarity=0.261  Sum_probs=27.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus        28 ~~lg~G~~g~V~~~~~~~~~~~valK~~~~   57 (287)
T 2wei_A           28 CMLGKGSFGEVLKCKDRITQQEYAVKVINK   57 (287)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEG
T ss_pred             EEEcCCCCEEEEEEEEcCCCcEEEEEEecc
Confidence            789999999999999987788999999854

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=96.64  E-value=0.0032  Score=52.58  Aligned_cols=53  Identities=17%  Similarity=0.140  Sum_probs=36.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-hhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-KAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||++....++..+|+|.+..... ........+++.+++-+|++
T Consensus        39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~   92 (360)
T 3eqc_A           39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY   92 (360)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTT
T ss_pred             eeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCC
Confidence            789999999999999987789999999865422 22233444555444444444

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=96.60  E-value=0.0032  Score=53.08  Aligned_cols=31  Identities=19%  Similarity=0.283  Sum_probs=28.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++....++..+|+|.+...
T Consensus        15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~   45 (345)
T 3a8x_A           15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKE   45 (345)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEEGG
T ss_pred             EEEEecCCeEEEEEEECCCCCEEEEEEEEhH
Confidence            7899999999999999888999999999653

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=96.60  E-value=0.0026  Score=54.75  Aligned_cols=30  Identities=30%  Similarity=0.161  Sum_probs=27.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus        68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~   97 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD   97 (400)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEC
T ss_pred             ceeeeccCeEEEEEEECCCCCEEEEEEeCc
Confidence            579999999999999988889999999864

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=96.60  E-value=0.0037  Score=51.91  Aligned_cols=31  Identities=26%  Similarity=0.237  Sum_probs=27.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++....++..+|+|.+...
T Consensus        47 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~   77 (335)
T 2owb_A           47 RFLGKGGFAKCFEISDADTKEVFAGKIVPKS   77 (335)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEGG
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEechh
Confidence            8899999999999999888889999998653

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=96.60  E-value=0.0028  Score=52.81  Aligned_cols=30  Identities=23%  Similarity=0.353  Sum_probs=27.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus        12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~   41 (318)
T 1fot_A           12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKK   41 (318)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEH
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence            789999999999999988889999999865

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=96.58  E-value=0.0023  Score=54.48  Aligned_cols=53  Identities=19%  Similarity=0.144  Sum_probs=33.8

Q ss_pred             cEEcccCCceEEEEEEc---CCCeeeeeeeecccc-hhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLR---ETNSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~---~~~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|...   ..+..+|+|.+.... ......+..+++.+++-+|++
T Consensus        51 ~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~n  107 (373)
T 2qol_A           51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN  107 (373)
T ss_dssp             EEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTT
T ss_pred             eEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCC
Confidence            78999999999999876   345679999986532 223333444444444444444

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=96.58  E-value=0.0032  Score=53.22  Aligned_cols=53  Identities=19%  Similarity=0.204  Sum_probs=36.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch---hhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG---KAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~---~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||++....++..+|+|.+.....   ........+.+.+++.+|++
T Consensus        47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~  102 (350)
T 1rdq_E           47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF  102 (350)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTT
T ss_pred             EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCC
Confidence            789999999999999988889999999865321   12223333444444444444

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=96.57  E-value=0.0014  Score=56.57  Aligned_cols=30  Identities=20%  Similarity=-0.011  Sum_probs=27.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ++||+|+||.||+|....++..||||.+..
T Consensus        84 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~  113 (413)
T 3dzo_A           84 TVLGQEDPYAYLEATDQETGESFEVHVPYF  113 (413)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEECC
T ss_pred             cccccCCCEEEEEEEecCCCCceEEEEEec
Confidence            889999999999999887789999998863

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=96.57  E-value=0.0021  Score=53.39  Aligned_cols=51  Identities=18%  Similarity=0.238  Sum_probs=33.5

Q ss_pred             cEEcccCCceEEEEEEc---CCCeeeeeeeecccch-------hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLR---ETNSFFSNWNVQLKHG-------KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~---~~~~~vavK~i~~~~~-------~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++...   .++..+|+|.+.....       .....+...++.++|+|-
T Consensus        23 ~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i   83 (327)
T 3a62_A           23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI   83 (327)
T ss_dssp             EEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTB
T ss_pred             EEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCc
Confidence            78999999999999874   4578999999865321       122334445556666653

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=96.57  E-value=0.0038  Score=50.27  Aligned_cols=53  Identities=17%  Similarity=0.082  Sum_probs=32.9

Q ss_pred             cEEcccCCceEEEEEEcCCCe---eeeeeeecccch-hhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNS---FFSNWNVQLKHG-KAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~---~vavK~i~~~~~-~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      .+||+|+||.||+|....++.   .+|+|.+..... .....+..+++.++.-+|++
T Consensus        27 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~   83 (298)
T 3pls_A           27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN   83 (298)
T ss_dssp             EEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTT
T ss_pred             ceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCC
Confidence            789999999999998754333   689999865332 22233334444444434443

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=96.56  E-value=0.0053  Score=50.31  Aligned_cols=53  Identities=13%  Similarity=0.038  Sum_probs=36.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh---hHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK---AVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~---~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||++....++..+|+|.+......   .......+++.+++-++++
T Consensus        40 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~   95 (309)
T 2h34_A           40 RLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPH   95 (309)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTT
T ss_pred             EEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCC
Confidence            7899999999999999877899999998653221   1233334444444444444

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=96.56  E-value=0.0031  Score=54.38  Aligned_cols=30  Identities=20%  Similarity=0.295  Sum_probs=27.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus        21 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~   50 (384)
T 4fr4_A           21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNK   50 (384)
T ss_dssp             EEEECCTTCCEEEEEETTTCCEEEEEEEEH
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEeh
Confidence            789999999999999988889999999865

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=96.54  E-value=0.0023  Score=51.83  Aligned_cols=53  Identities=19%  Similarity=0.276  Sum_probs=32.0

Q ss_pred             cEEcccCCceEEEEEE--cCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFL--RETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l--~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|..  ...+..+|+|.+.....  ........+++.++..++++
T Consensus        23 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~   79 (291)
T 1xbb_A           23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY   79 (291)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTT
T ss_pred             CccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCC
Confidence            3899999999999954  44567899999865321  12233344444444444444

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=96.54  E-value=0.0026  Score=55.49  Aligned_cols=48  Identities=19%  Similarity=0.282  Sum_probs=34.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc-hhhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH-GKAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|...  +..||||.+.... ......+...++.++|+|
T Consensus       199 ~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~n  247 (450)
T 1k9a_A          199 QTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSN  247 (450)
T ss_dssp             EEEEECSSEEEEEEEET--TEEEEEEEESSCTTSHHHHHHHHHHHTCCCTT
T ss_pred             eeecCcCCeeEEEEEec--CCeEEEEEeCCchHHHHHHHHHHHHHhccCCC
Confidence            88999999999999985  5789999996543 223334444455566655

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=96.54  E-value=0.0024  Score=54.17  Aligned_cols=31  Identities=26%  Similarity=0.410  Sum_probs=28.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++....++..+|+|.+...
T Consensus        29 ~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~   59 (353)
T 3txo_A           29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKD   59 (353)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHH
T ss_pred             EEEeeCCCEEEEEEEEcCCCCEEEEEEEEHH
Confidence            7899999999999999888899999998653

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=96.54  E-value=0.003  Score=56.55  Aligned_cols=50  Identities=22%  Similarity=0.201  Sum_probs=36.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|.... +..||||.+....  ......+...++.++|+|-
T Consensus       273 ~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpni  324 (535)
T 2h8h_A          273 VKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL  324 (535)
T ss_dssp             EEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTB
T ss_pred             eecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCE
Confidence            789999999999999976 5779999986533  2233444555566766653

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=96.53  E-value=0.0049  Score=50.68  Aligned_cols=31  Identities=19%  Similarity=0.502  Sum_probs=28.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++....++..+|+|.+...
T Consensus        28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~   58 (327)
T 3aln_A           28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRST   58 (327)
T ss_dssp             CEEEECSSEEEEEEEETTTTEEEEEEEEECC
T ss_pred             heeccCCCEEEEEEEEcCCCCEEEEEEeecc
Confidence            7899999999999999877899999999653

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=96.53  E-value=0.0027  Score=52.08  Aligned_cols=55  Identities=15%  Similarity=0.157  Sum_probs=31.7

Q ss_pred             cEEcccCCceEEEEEEcCCCe---eeeeeeeccc--chhhHHHHHHHHHHHhCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNS---FFSNWNVQLK--HGKAVALCKGLFRDIRNPTGPYGG  170 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~---~vavK~i~~~--~~~~~~~~~~~~~~Ir~~n~~~~~  170 (187)
                      ..||+|+||.||+|....++.   .+|+|.+...  .......+..+++.++.-++++.-
T Consensus        29 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   88 (323)
T 3qup_A           29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA   88 (323)
T ss_dssp             EEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBC
T ss_pred             ceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCcee
Confidence            789999999999999865443   7999998653  222333344455555544554443

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=96.52  E-value=0.0033  Score=55.01  Aligned_cols=30  Identities=23%  Similarity=0.116  Sum_probs=27.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus        32 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~   61 (484)
T 3nyv_A           32 RVLGKGSFGEVILCKDKITGQECAVKVISK   61 (484)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEET
T ss_pred             eEEecCCCEEEEEEEECCCCCEEEEEEEEh
Confidence            789999999999999988889999999854

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=96.52  E-value=0.0037  Score=54.27  Aligned_cols=50  Identities=14%  Similarity=0.016  Sum_probs=34.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHH-hCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDI-RNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~I-r~~n~  166 (187)
                      ..||+|+||.||.+... ++..||||++..........+...++++ +|||-
T Consensus        21 ~~LG~G~~g~V~~~~~~-~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnI   71 (434)
T 2rio_A           21 KILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNV   71 (434)
T ss_dssp             EEEEECSTTCEEEEEES-SSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTB
T ss_pred             CeEeeCCCeEEEEEEEE-CCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCc
Confidence            78999999999765544 4789999998664433334444445554 67764

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=96.51  E-value=0.0021  Score=53.23  Aligned_cols=50  Identities=22%  Similarity=0.272  Sum_probs=28.9

Q ss_pred             cEEcccCCceEEEEEEcCCCee----eeeeeecccc----hhhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSF----FSNWNVQLKH----GKAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~----vavK~i~~~~----~~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..    +|+|.+....    ......+......++|+|
T Consensus        21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~   78 (327)
T 3poz_A           21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH   78 (327)
T ss_dssp             EEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTT
T ss_pred             eEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCC
Confidence            7899999999999997655554    4777774322    122333444455566655

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=96.51  E-value=0.0028  Score=51.48  Aligned_cols=49  Identities=20%  Similarity=0.309  Sum_probs=33.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc----h---hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH----G---KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~----~---~~~~~~~~~~~~Ir~~n~  166 (187)
                      +.||+|+||.||+|...  +..+|+|.+....    .   .....+....+.++|+|-
T Consensus        37 ~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   92 (307)
T 2nru_A           37 NKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL   92 (307)
T ss_dssp             CEEEECSSEEEEEEESS--SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTB
T ss_pred             CccccCCCeEEEEEEEC--CceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCe
Confidence            78999999999999863  6789999985421    1   222333444556666653

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=96.50  E-value=0.0016  Score=54.45  Aligned_cols=48  Identities=10%  Similarity=-0.037  Sum_probs=34.3

Q ss_pred             cEEcccCCceEEEEEEcC--------CCeeeeeeeecccchhhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE--------TNSFFSNWNVQLKHGKAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~--------~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....        .+..+|+|.+...  .....+....+.++|+|
T Consensus        48 ~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--~~~~~E~~~l~~l~h~n  103 (352)
T 2jii_A           48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--GRLFNEQNFFQRAAKPL  103 (352)
T ss_dssp             EEEEEETTEEEEEEEECC-----------CEEEEEEETT--STHHHHHHHHHHHCCHH
T ss_pred             EEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--chHHHHHHHHHHhcccc
Confidence            889999999999999875        3678999998653  23444555666677654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=96.50  E-value=0.0036  Score=50.99  Aligned_cols=50  Identities=24%  Similarity=0.087  Sum_probs=34.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHH-HHHHhCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGL-FRDIRNPTGP  167 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~-~~~Ir~~n~~  167 (187)
                      ..||+|+||.||++....++..+|+|.+....  ....+... .+.++|+|..
T Consensus        24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~e~~~~~~~~~h~~i~   74 (299)
T 3m2w_A           24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--KARREVELHWRASQCPHIV   74 (299)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECSH--HHHHHHHHHHHHTTSTTBC
T ss_pred             cccccCCCeEEEEEEEcCCCcEEEEEEecccH--HHHHHHHHHHHhccCCCch
Confidence            67899999999999998778999999986422  22222222 2445666643

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=96.50  E-value=0.0033  Score=56.98  Aligned_cols=51  Identities=20%  Similarity=0.298  Sum_probs=36.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch------hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG------KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~------~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++....++..+|+|.+.....      .....+...++.++|+|-
T Consensus       191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~I  247 (543)
T 3c4z_A          191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFI  247 (543)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTB
T ss_pred             EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCE
Confidence            779999999999999988899999999965321      122334444555666653

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=96.50  E-value=0.0032  Score=51.98  Aligned_cols=49  Identities=18%  Similarity=0.261  Sum_probs=33.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hh---hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GK---AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~---~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|...  +..+|+|.+....  ..   ....+....+.++|+|-
T Consensus        43 ~~lG~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i   96 (309)
T 3p86_A           43 EKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI   96 (309)
T ss_dssp             EEEEECSSEEEEEEEET--TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             eEeecCCCeEEEEEEEC--CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCE
Confidence            78999999999999874  6889999986432  12   22233444555666553

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=96.50  E-value=0.0026  Score=58.38  Aligned_cols=50  Identities=20%  Similarity=0.375  Sum_probs=33.5

Q ss_pred             cEEcccCCceEEEEEEc--CCCeeeeeeeecccch-----hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLR--ETNSFFSNWNVQLKHG-----KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~--~~~~~vavK~i~~~~~-----~~~~~~~~~~~~Ir~~n  165 (187)
                      +.||+|+||.||+|...  ..+..+|||.+.....     .....+...++.++|+|
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpn  431 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY  431 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCC
Confidence            57999999999999653  3457899999865322     22333444555566655

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=96.49  E-value=0.0018  Score=52.92  Aligned_cols=31  Identities=26%  Similarity=0.264  Sum_probs=27.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....++..+|+|.+...
T Consensus        37 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~   67 (312)
T 2iwi_A           37 PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRN   67 (312)
T ss_dssp             EEEEEETTEEEEEEECTTTCCEEEEEECCST
T ss_pred             eEEEcCCCEEEEEEEEccCCeEEEEEEEecc
Confidence            7899999999999998877889999998643

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=96.48  E-value=0.0031  Score=53.47  Aligned_cols=48  Identities=19%  Similarity=0.299  Sum_probs=34.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRN  163 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~  163 (187)
                      ..||+|+||.||+|....++..||||.+.....  .....+....+.+++
T Consensus        60 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~  109 (382)
T 2vx3_A           60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNK  109 (382)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHh
Confidence            789999999999999988889999999965332  222333444555553

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=96.48  E-value=0.0029  Score=57.90  Aligned_cols=50  Identities=22%  Similarity=0.302  Sum_probs=35.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch------hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG------KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~------~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++....++..+|+|.+.....      .....+...++.++|+|
T Consensus       190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~  245 (576)
T 2acx_A          190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF  245 (576)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTT
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            789999999999999988899999999865321      11223344455566655

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=96.48  E-value=0.0039  Score=51.96  Aligned_cols=47  Identities=13%  Similarity=0.208  Sum_probs=33.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hh---hHHHHHHHHHHHhC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GK---AVALCKGLFRDIRN  163 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~---~~~~~~~~~~~Ir~  163 (187)
                      ..||+|+||.||++.... +..+|+|.+....  ..   ....+...+..++|
T Consensus        15 ~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~   66 (343)
T 3dbq_A           15 KQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ   66 (343)
T ss_dssp             EEESCCSSEEEEEEECTT-SCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCCCeEEEEEEeCC-CCEEEEEEeeccccchHHHHHHHHHHHHHHhhhh
Confidence            789999999999999865 7889999986432  11   22334445556665

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=96.45  E-value=0.0022  Score=52.72  Aligned_cols=30  Identities=33%  Similarity=0.565  Sum_probs=25.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|...+ +..+|+|.+...
T Consensus        36 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~   65 (326)
T 3uim_A           36 NILGRGGFGKVYKGRLAD-GTLVAVKRLKEE   65 (326)
T ss_dssp             TEEECCSSSEEEEECCSS-SCCEEEEECCC-
T ss_pred             eeEecCCCcEEEEEEecC-CCEEEEEEeccc
Confidence            889999999999998764 788999998653

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=96.45  E-value=0.005  Score=50.68  Aligned_cols=53  Identities=13%  Similarity=0.078  Sum_probs=34.4

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeecccch-hhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQLKHG-KAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~~~~-~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|....     ++..+|+|.+..... .....+..+++.++.-+|++
T Consensus        53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~  111 (343)
T 1luf_A           53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPN  111 (343)
T ss_dssp             EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTT
T ss_pred             eeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCC
Confidence            789999999999999863     347899999865322 22233344444444444444

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=96.45  E-value=0.0035  Score=50.89  Aligned_cols=51  Identities=14%  Similarity=0.096  Sum_probs=34.2

Q ss_pred             cEEcccCCceEEEEEE-----cCCCeeeeeeeecccch----hhHHHHHHHHHHH-hCCCC
Q 047282          116 GKLGQGGFGGVDKGFL-----RETNSFFSNWNVQLKHG----KAVALCKGLFRDI-RNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l-----~~~~~~vavK~i~~~~~----~~~~~~~~~~~~I-r~~n~  166 (187)
                      ..||+|+||.||+|..     ..++..+|+|.+.....    .....+......+ +|+|-
T Consensus        29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i   89 (313)
T 1t46_A           29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI   89 (313)
T ss_dssp             EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             HhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCe
Confidence            7899999999999985     23467899999865332    1223333444556 66653

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=96.44  E-value=0.0026  Score=52.49  Aligned_cols=30  Identities=23%  Similarity=0.303  Sum_probs=21.6

Q ss_pred             cEEcccCCceEEEEEE-----cCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFL-----RETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l-----~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|..     ..++..+|+|.+..
T Consensus        36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~   70 (327)
T 2yfx_A           36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE   70 (327)
T ss_dssp             EECC--CSSCEEEEEC--------CCEEEEEECCS
T ss_pred             EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecc
Confidence            7899999999999984     33466899999854

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=96.44  E-value=0.0041  Score=52.65  Aligned_cols=31  Identities=16%  Similarity=0.329  Sum_probs=27.9

Q ss_pred             cEEccc--CCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQG--GFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G--~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|  +||.||++....++..||+|.+...
T Consensus        31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~   63 (389)
T 3gni_B           31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLE   63 (389)
T ss_dssp             EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGG
T ss_pred             ecccCCcCCceEEEEEEEcCCCCEEEEEEeccc
Confidence            789999  9999999999888899999999653

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=96.44  E-value=0.0044  Score=49.73  Aligned_cols=51  Identities=16%  Similarity=0.192  Sum_probs=34.3

Q ss_pred             cEEcccCCceEEEEEEcC---CCeeeeeeeecccc----hhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE---TNSFFSNWNVQLKH----GKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~---~~~~vavK~i~~~~----~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....   .+..+|+|.+....    ......+....+.++|+|-
T Consensus        18 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   75 (281)
T 3cc6_A           18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI   75 (281)
T ss_dssp             EEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTB
T ss_pred             EEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCc
Confidence            789999999999998653   23459999986532    1223334445566777664

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=96.43  E-value=0.0037  Score=50.44  Aligned_cols=50  Identities=20%  Similarity=0.266  Sum_probs=32.5

Q ss_pred             cEEcccCCceEEEEEEc--CCCeeeeeeeecccch-hhH---HHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLR--ETNSFFSNWNVQLKHG-KAV---ALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~--~~~~~vavK~i~~~~~-~~~---~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|...  ..+..+|+|.+..... ...   ..+....+.++|+|
T Consensus        16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~   71 (287)
T 1u59_A           16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPY   71 (287)
T ss_dssp             EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTT
T ss_pred             ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCC
Confidence            47999999999999864  3467899999865322 222   23333444555554

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=96.43  E-value=0.0043  Score=50.17  Aligned_cols=31  Identities=23%  Similarity=0.303  Sum_probs=25.2

Q ss_pred             cEEcccCCceEEEEEE----cCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFL----RETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l----~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++..    ..++..+|+|.+...
T Consensus        27 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~   61 (302)
T 4e5w_A           27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE   61 (302)
T ss_dssp             EEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--
T ss_pred             hccCCCCceEEEEEEEccccCccCeEEEEEEeccc
Confidence            7899999999999984    445789999998643

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=96.42  E-value=0.0023  Score=54.84  Aligned_cols=49  Identities=20%  Similarity=0.180  Sum_probs=35.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|.... +..+|+|++....... ..+...++.++|+|-
T Consensus        46 ~~lG~G~~g~V~~a~~~~-~~~~aikk~~~~~~~~-~~E~~il~~l~h~ni   94 (394)
T 4e7w_A           46 KVIGNGSFGVVFQAKLVE-SDEVAIKKVLQDKRFK-NRELQIMRIVKHPNV   94 (394)
T ss_dssp             EEEEEETTEEEEEEEETT-TEEEEEEEEECCTTSC-CHHHHHHHTCCCTTB
T ss_pred             EEEeeCCCeEEEEEEECC-CCeEEEEEEecCcchH-HHHHHHHHhCCCCCc
Confidence            889999999999999977 4559999886543222 234555666777664

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=96.42  E-value=0.0043  Score=51.37  Aligned_cols=30  Identities=20%  Similarity=0.291  Sum_probs=27.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|+|.+..
T Consensus        35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~   64 (327)
T 3lm5_A           35 KELGRGKFAVVRQCISKSTGQEYAAKFLKK   64 (327)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEES
T ss_pred             ceeCCCCCeEEEEEEECCCCCEEEEEEEeh
Confidence            679999999999999988889999999865

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=96.42  E-value=0.0029  Score=53.72  Aligned_cols=31  Identities=23%  Similarity=0.294  Sum_probs=27.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++....++..+|+|.+...
T Consensus        26 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~   56 (353)
T 2i0e_A           26 MVLGKGSFGKVMLSERKGTDELYAVKILKKD   56 (353)
T ss_dssp             EEEEEETTEEEEEEEETTEEEEEEEEEEEHH
T ss_pred             EEEeeCCCEEEEEEEECCCCCEEEEEEEEHH
Confidence            7899999999999999887889999998653

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=96.40  E-value=0.0018  Score=56.29  Aligned_cols=30  Identities=23%  Similarity=0.273  Sum_probs=27.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|+|.+..
T Consensus       154 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~  183 (446)
T 4ejn_A          154 KLLGKGTFGKVILVKEKATGRYYAMKILKK  183 (446)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEH
T ss_pred             EEEeeCcCEEEEEEEEcCCCCEEEEEEEEh
Confidence            789999999999999988889999999865

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=96.39  E-value=0.0032  Score=52.06  Aligned_cols=28  Identities=21%  Similarity=0.206  Sum_probs=25.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++..  ++..+|+|.+..
T Consensus        37 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~   64 (348)
T 2pml_X           37 RTLNQGKFNKIILCEK--DNKFYALKKYEK   64 (348)
T ss_dssp             EEEECCSSCCEEEEEE--TTEEEEEEEEEH
T ss_pred             EEEcCCCCeEEEEEEc--CCceEEEEEeec
Confidence            7899999999999998  489999999864

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=96.38  E-value=0.003  Score=52.00  Aligned_cols=51  Identities=22%  Similarity=0.266  Sum_probs=36.9

Q ss_pred             cEEcccCCceEEEEEEcCCC-eeeeeeeecccc--hhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETN-SFFSNWNVQLKH--GKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~-~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++....++ ..+|+|.+....  ......+...++.++|++.
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~   78 (355)
T 2eu9_A           25 GNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDK   78 (355)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             EEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCC
Confidence            78999999999999986555 689999986532  2233445556667777653

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=96.38  E-value=0.0051  Score=50.59  Aligned_cols=51  Identities=14%  Similarity=0.094  Sum_probs=34.3

Q ss_pred             cEEcccCCceEEEEEEcCCCe-----eeeeeeecccch----hhHHHHHHHHHHH-hCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNS-----FFSNWNVQLKHG----KAVALCKGLFRDI-RNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~-----~vavK~i~~~~~----~~~~~~~~~~~~I-r~~n~  166 (187)
                      ..||+|+||.||+|....++.     .+|+|.+.....    .....+....+.+ +|+|-
T Consensus        52 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i  112 (333)
T 2i1m_A           52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI  112 (333)
T ss_dssp             EEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             eEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCe
Confidence            789999999999999865443     699998865322    2223344445556 66663

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=96.37  E-value=0.0041  Score=49.47  Aligned_cols=49  Identities=22%  Similarity=0.306  Sum_probs=31.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-------hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-------KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-------~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|...  +..+|+|.+.....       .....+....+.++|+|-
T Consensus        13 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i   68 (271)
T 3dtc_A           13 EIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI   68 (271)
T ss_dssp             EEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTB
T ss_pred             eeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCE
Confidence            78999999999999975  68899999854321       122333444455666653

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=96.32  E-value=0.0037  Score=51.63  Aligned_cols=48  Identities=25%  Similarity=0.302  Sum_probs=35.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch---------hhHHHHHHHHHHHhC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG---------KAVALCKGLFRDIRN  163 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~---------~~~~~~~~~~~~Ir~  163 (187)
                      ..||+|+||.||+|....++..+|+|.+.....         .....+....+.+++
T Consensus        49 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~  105 (320)
T 3a99_A           49 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS  105 (320)
T ss_dssp             EECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS
T ss_pred             EEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhcc
Confidence            789999999999999887889999999865321         222345556667765

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=96.30  E-value=0.006  Score=54.14  Aligned_cols=31  Identities=26%  Similarity=0.243  Sum_probs=28.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....++..+|+|.+...
T Consensus        22 ~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~   52 (476)
T 2y94_A           22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQ   52 (476)
T ss_dssp             EEEECCSSSCEEEEEETTTCCEEEEEEEEHH
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEEhh
Confidence            7899999999999999877899999999653

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=96.29  E-value=0.0037  Score=51.00  Aligned_cols=50  Identities=16%  Similarity=0.175  Sum_probs=36.0

Q ss_pred             cEEcccCCceEEEEEE-cCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFL-RETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l-~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++.. ..++..+|+|.+.....  .....+...++.++|++
T Consensus        20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~   72 (339)
T 1z57_A           20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTD   72 (339)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcC
Confidence            7899999999999987 44678999999865322  23344455566677655

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=96.29  E-value=0.0059  Score=49.87  Aligned_cols=51  Identities=20%  Similarity=0.329  Sum_probs=34.7

Q ss_pred             cEEcccCCceEEEEEEc-CCCeeeeeeeecccch-----hhHHHHHHHHHHH---hCCCC
Q 047282          116 GKLGQGGFGGVDKGFLR-ETNSFFSNWNVQLKHG-----KAVALCKGLFRDI---RNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~-~~~~~vavK~i~~~~~-----~~~~~~~~~~~~I---r~~n~  166 (187)
                      ..||+|+||.||++... .++..+|+|.+.....     .....+...++.+   +|+|-
T Consensus        17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i   76 (326)
T 1blx_A           17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV   76 (326)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTB
T ss_pred             eeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCe
Confidence            78999999999999984 5578899999854321     1223344445555   56554

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=96.28  E-value=0.0057  Score=48.31  Aligned_cols=51  Identities=14%  Similarity=0.058  Sum_probs=35.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|...  +..+|+|.+....  ......+..+++.+++-+|++
T Consensus        16 ~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   68 (271)
T 3kmu_A           16 TKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN   68 (271)
T ss_dssp             EEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTT
T ss_pred             HHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCc
Confidence            78999999999999985  6889999986532  223334455555555555544

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=96.28  E-value=0.0048  Score=52.33  Aligned_cols=50  Identities=16%  Similarity=0.125  Sum_probs=32.6

Q ss_pred             cEEcccCCceEEEEEEc-------CCCeeeeeeeecccch-hh---HHHHHHHHHHH-hCCC
Q 047282          116 GKLGQGGFGGVDKGFLR-------ETNSFFSNWNVQLKHG-KA---VALCKGLFRDI-RNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~-------~~~~~vavK~i~~~~~-~~---~~~~~~~~~~I-r~~n  165 (187)
                      ..||+|+||.||+|...       ..+..+|+|.+..... ..   ...+...++.+ +|+|
T Consensus        87 ~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpn  148 (370)
T 2psq_A           87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN  148 (370)
T ss_dssp             EEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTT
T ss_pred             eEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCC
Confidence            78999999999999864       2345799999865322 22   22333344455 5655

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=96.28  E-value=0.0079  Score=48.72  Aligned_cols=53  Identities=17%  Similarity=0.133  Sum_probs=34.0

Q ss_pred             cEEcccCCceEEEEEEc-----CCCeeeeeeeecccc-hhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLR-----ETNSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~-----~~~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||++...     .++..+|+|.+.... .........+++.++.-+|++
T Consensus        29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~   87 (314)
T 2ivs_A           29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPH   87 (314)
T ss_dssp             EEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTT
T ss_pred             eeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCc
Confidence            78999999999999873     335789999986532 222233344444444444443

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=96.26  E-value=0.0037  Score=53.50  Aligned_cols=31  Identities=26%  Similarity=0.364  Sum_probs=28.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++....++..+|+|.+...
T Consensus        44 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~   74 (373)
T 2r5t_A           44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKK   74 (373)
T ss_dssp             EEEECCTTCEEEEEEETTTCCEEEEEEEEGG
T ss_pred             EEEeeCCCeEEEEEEEcCCCCEEEEEEEEHH
Confidence            7899999999999999888889999999654

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=96.26  E-value=0.0065  Score=49.36  Aligned_cols=31  Identities=26%  Similarity=0.337  Sum_probs=21.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....++..+|+|.+...
T Consensus        31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~   61 (318)
T 2dyl_A           31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS   61 (318)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEEEETT
T ss_pred             ceeeecCCeeEEEEEEecCCeEEEEEEeccc
Confidence            7899999999999999877899999998653

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=96.26  E-value=0.0031  Score=52.10  Aligned_cols=51  Identities=22%  Similarity=0.142  Sum_probs=32.3

Q ss_pred             cEEcccCCceEEEEEEcCCCee----eeeeeecccc-h---hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSF----FSNWNVQLKH-G---KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~----vavK~i~~~~-~---~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..    +|+|.+.... .   .....+...+..++|+|-
T Consensus        19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i   77 (325)
T 3kex_A           19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI   77 (325)
T ss_dssp             EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTB
T ss_pred             eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCc
Confidence            7899999999999998765655    6777664321 1   122233344455666553

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=96.25  E-value=0.0043  Score=55.20  Aligned_cols=51  Identities=24%  Similarity=0.289  Sum_probs=38.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc-hhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~  166 (187)
                      .+||+|+||.||+|....++..||||.+.... ......+...++.++|.++
T Consensus        13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~   64 (483)
T 3sv0_A           13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTG   64 (483)
T ss_dssp             CCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTT
T ss_pred             EEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCC
Confidence            78999999999999988778999999875432 2344455566667777554

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=96.23  E-value=0.0062  Score=50.33  Aligned_cols=51  Identities=16%  Similarity=0.106  Sum_probs=34.3

Q ss_pred             cEEcccCCceEEEEEEc-----CCCeeeeeeeecccc----hhhHHHHHHHHHHH-hCCCC
Q 047282          116 GKLGQGGFGGVDKGFLR-----ETNSFFSNWNVQLKH----GKAVALCKGLFRDI-RNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~-----~~~~~vavK~i~~~~----~~~~~~~~~~~~~I-r~~n~  166 (187)
                      ..||+|+||.||+|...     ..+..+|+|.+....    ......+......+ +|||-
T Consensus        51 ~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i  111 (344)
T 1rjb_A           51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI  111 (344)
T ss_dssp             EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTB
T ss_pred             eeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCe
Confidence            78999999999999972     245679999986432    12233444455566 67663

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=96.22  E-value=0.0061  Score=52.16  Aligned_cols=47  Identities=13%  Similarity=0.201  Sum_probs=33.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--h---hhHHHHHHHHHHHhC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--G---KAVALCKGLFRDIRN  163 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~---~~~~~~~~~~~~Ir~  163 (187)
                      ..||+|+||.||++.... +..+|||.+....  .   .....+...++.++|
T Consensus        62 ~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~  113 (390)
T 2zmd_A           62 KQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ  113 (390)
T ss_dssp             EEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHccc
Confidence            789999999999999876 7889999986432  1   122334444555654

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=96.19  E-value=0.0042  Score=51.56  Aligned_cols=29  Identities=28%  Similarity=0.377  Sum_probs=23.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeee----eeeeec
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFF----SNWNVQ  144 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~v----avK~i~  144 (187)
                      ..||+|+||.||+|....++..+    |+|.+.
T Consensus        21 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~   53 (327)
T 3lzb_A           21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR   53 (327)
T ss_dssp             EEEEECSSEEEEEEEECCTTCSCCEEEEEEEEC
T ss_pred             EEeeeCCCeEEEEEEEcCCCceEEEEEEEEeec
Confidence            78999999999999987656654    666664

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=96.17  E-value=0.005  Score=49.34  Aligned_cols=48  Identities=19%  Similarity=0.271  Sum_probs=32.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||++...  +..+|+|.+..... .....+....+.++|+|
T Consensus        27 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~   75 (278)
T 1byg_A           27 QTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSN   75 (278)
T ss_dssp             EEEEECSSCEEEEEEET--TEEEEEEECCCCC--HHHHHTHHHHTTCCCTT
T ss_pred             eEEecCCCceEEEEEEc--CCEEEEEEecchhHHHHHHHHHHHHHhCCCCC
Confidence            78999999999999874  68899999865432 22223333444455544

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=96.16  E-value=0.0087  Score=49.67  Aligned_cols=53  Identities=19%  Similarity=0.137  Sum_probs=32.3

Q ss_pred             cEEcccCCceEEEEEEcCCC----eeeeeeeecccc-hhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETN----SFFSNWNVQLKH-GKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~----~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|....++    ..+|+|.+.... ......+..+++.+++-++++
T Consensus        50 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~  107 (333)
T 1mqb_A           50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN  107 (333)
T ss_dssp             EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTT
T ss_pred             cEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence            78999999999999886432    359999986532 222223334444444444443

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=96.16  E-value=0.0067  Score=50.52  Aligned_cols=48  Identities=21%  Similarity=0.074  Sum_probs=35.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRN  163 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~  163 (187)
                      ..||+|+||.||+|....++..+|+|.+.....  .....+...++.+++
T Consensus        25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~   74 (373)
T 1q8y_A           25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVND   74 (373)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHH
T ss_pred             EeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhc
Confidence            789999999999999887789999999865322  223344445556654

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=96.15  E-value=0.0064  Score=50.26  Aligned_cols=51  Identities=16%  Similarity=0.110  Sum_probs=32.9

Q ss_pred             cEEcccCCceEEEEEEc-------CCCeeeeeeeecccch-h---hHHHHHHHHHHH-hCCCC
Q 047282          116 GKLGQGGFGGVDKGFLR-------ETNSFFSNWNVQLKHG-K---AVALCKGLFRDI-RNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~-------~~~~~vavK~i~~~~~-~---~~~~~~~~~~~I-r~~n~  166 (187)
                      ..||+|+||.||+|...       .++..+|+|.+..... .   ....+...++.+ +|+|-
T Consensus        41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i  103 (334)
T 2pvf_A           41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI  103 (334)
T ss_dssp             EEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             eEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCE
Confidence            78999999999999874       2356799999865322 1   223334444556 66653

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=96.12  E-value=0.006  Score=49.50  Aligned_cols=31  Identities=23%  Similarity=0.147  Sum_probs=25.5

Q ss_pred             cEEcccCCceEEEEEEc-----CCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLR-----ETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~-----~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|...     .++..+|+|.+...
T Consensus        33 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~   68 (316)
T 2xir_A           33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG   68 (316)
T ss_dssp             EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT
T ss_pred             eEEcCCCceeEEEEEEecCCccccceEEEEEecccC
Confidence            78999999999999853     34678999998653

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=96.10  E-value=0.0086  Score=48.76  Aligned_cols=54  Identities=20%  Similarity=0.263  Sum_probs=31.9

Q ss_pred             cEEcccCCceEEEEEEcC---CCeeeeeeeecccc--hhhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE---TNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~---~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      ..||+|+||.||+|....   ++..+|+|.+....  ......+..+++.+++-+|++-
T Consensus        40 ~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i   98 (313)
T 3brb_A           40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV   98 (313)
T ss_dssp             EEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTB
T ss_pred             cceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCe
Confidence            789999999999998754   34579999986432  2222333444444444444443

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=96.07  E-value=0.012  Score=47.25  Aligned_cols=53  Identities=15%  Similarity=0.111  Sum_probs=33.0

Q ss_pred             cEEcccCCceEEEEEEcCC---Ceeeeeeeecccc-hhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRET---NSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~---~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|....+   +..+|+|.+.... ......+..+++.++.-+|++
T Consensus        21 ~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~   77 (281)
T 1mp8_A           21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH   77 (281)
T ss_dssp             EEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTT
T ss_pred             eEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCc
Confidence            7899999999999998542   4569999886432 222223334444444444443

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=96.05  E-value=0.0097  Score=48.01  Aligned_cols=30  Identities=23%  Similarity=0.340  Sum_probs=23.4

Q ss_pred             cEEcccCCceEEEEEEcCC---Ceeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRET---NSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~---~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|.....   ...+|+|.+..
T Consensus        31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~   63 (298)
T 3f66_A           31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR   63 (298)
T ss_dssp             EEEEEETTEEEEEEEEC-----CEEEEEEEETT
T ss_pred             ceeeecCCceEEEEEEecCCCceeEEEEEeccc
Confidence            7899999999999997542   23589998865

>2a6v_A EMP46P; beta sandwich, carbohydrate binding protein, cargo receptor, structural genomics, NPPSFA; 1.52A {Saccharomyces cerevisiae} SCOP: b.29.1.13 PDB: 2a6w_A 2a6x_A

Probab=96.04  E-value=0.014  Score=47.40  Aligned_cols=63  Identities=16%  Similarity=0.148  Sum_probs=44.3

Q ss_pred             CCCceEEEEEEee-CCCceEEEEEEeCCCCCcccceeEE-EecCCccCCce--eEEEEEeecCCCccccceeeeeecc
Q 047282            9 KSGRRNEAWISYN-SSTHNLSVAFTGFRNNSVVMQGLDY-QVDLRQHLPEF--VTFGFSMETGVDFTIFSIYLWEFNS   82 (187)
Q Consensus         9 ~~G~~~~awI~Yd-~~~~~L~V~ls~~~~~~p~~p~ls~-~vdLs~~L~~~--v~VGFSasTG~~~~~h~i~sW~F~~   82 (187)
                      +.+....+.|.|+ ...+.|+|.+..       +.++.. .|+    ||+.  .|+||||+||...+.|+|++-.+..
T Consensus       153 n~~~~t~~ri~Y~~~~~~~l~v~id~-------~~Cf~~~~v~----LP~g~~~yfGiSAaTg~~~D~hdils~~~~~  219 (226)
T 2a6v_A          153 DSMVPSTLRLTYNPLDNHLLKLQMDN-------RVCFQTRKVK----FMGSSPFRIGTSAINDASKESFEILKMKLYD  219 (226)
T ss_dssp             SCSSCEEEEEEEEGGGTSEEEEEETT-------EEEEEESCCC----GGGTSCBEEEEEEECCTTCCEEEEEEEEEES
T ss_pred             CCCCCEEEEEEEEccCCCEEEEEEcC-------CeeEEECCee----cCCCCccEEEEEEcCCCCcccEEEEEEEEEe
Confidence            3456789999997 456789988842       123321 133    4443  4999999999999999999976653

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=96.01  E-value=0.003  Score=50.95  Aligned_cols=31  Identities=13%  Similarity=0.197  Sum_probs=20.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||++....++..+|+|.+...
T Consensus        21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~   51 (303)
T 2vwi_A           21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLE   51 (303)
T ss_dssp             EECC---CCCEEEEEC----CEEEEECCC--
T ss_pred             heeccccceEEEEEEECCCCcEEEEEEEEhh
Confidence            7899999999999998766889999998653

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=96.01  E-value=0.0078  Score=51.03  Aligned_cols=50  Identities=16%  Similarity=0.124  Sum_probs=32.9

Q ss_pred             cEEcccCCceEEEEEEcC-------CCeeeeeeeecccch-h---hHHHHHHHHHHH-hCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE-------TNSFFSNWNVQLKHG-K---AVALCKGLFRDI-RNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-------~~~~vavK~i~~~~~-~---~~~~~~~~~~~I-r~~n  165 (187)
                      ..||+|+||.||+|....       .+..+|+|.+..... .   ....+....+.+ +|+|
T Consensus        75 ~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpn  136 (382)
T 3tt0_A           75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN  136 (382)
T ss_dssp             EEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTT
T ss_pred             eEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCch
Confidence            789999999999998642       235799999865322 2   223334444455 6665

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=96.00  E-value=0.0079  Score=49.10  Aligned_cols=53  Identities=19%  Similarity=0.149  Sum_probs=33.8

Q ss_pred             cEEcccCCceEEEEEEc-----CCCeeeeeeeecccch-hhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLR-----ETNSFFSNWNVQLKHG-KAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~-----~~~~~vavK~i~~~~~-~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|...     ..+..+|+|.+..... .....+..+++.+++-++++
T Consensus        31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~   89 (322)
T 1p4o_A           31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH   89 (322)
T ss_dssp             EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTT
T ss_pred             eEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCC
Confidence            78999999999999865     2356899999865322 22223334444444444443

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=96.00  E-value=0.0077  Score=48.61  Aligned_cols=29  Identities=10%  Similarity=-0.176  Sum_probs=24.9

Q ss_pred             cEEcccCCceEEEEEEcCCCee--eeeeeec
Q 047282          116 GKLGQGGFGGVDKGFLRETNSF--FSNWNVQ  144 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~--vavK~i~  144 (187)
                      ..||+|+||.||+|....++..  +|||.+.
T Consensus        53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~   83 (258)
T 1zth_A           53 GVISTGKEANVFYADGVFDGKPVAMAVKIYR   83 (258)
T ss_dssp             EEEEECSSEEEEEEEEEETTEEEEEEEEEEC
T ss_pred             CEEeecceEEEEEEEEcCCCcEeeEEEEEEE
Confidence            7899999999999998445888  9999763

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=95.98  E-value=0.0048  Score=53.78  Aligned_cols=50  Identities=16%  Similarity=0.048  Sum_probs=33.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHH-hCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDI-RNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~I-r~~n~  166 (187)
                      .+||+|+||.||..... ++..||||++..........+...++++ +|||-
T Consensus        30 ~~LG~G~~G~V~~~~~~-~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnI   80 (432)
T 3p23_A           30 DVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADREVQLLRESDEHPNV   80 (432)
T ss_dssp             EEEEECGGGCEEEEEES-SSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTB
T ss_pred             CeeecCcCEEEEEEEEe-CCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCc
Confidence            78999999996543333 3788999999664433334455555566 56653

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=95.89  E-value=0.011  Score=53.95  Aligned_cols=52  Identities=19%  Similarity=0.241  Sum_probs=32.9

Q ss_pred             EEcccCCceEEEEEEc--CCCeeeeeeeecccch-hhHHHHHHHHHHHhCCCCCC
Q 047282          117 KLGQGGFGGVDKGFLR--ETNSFFSNWNVQLKHG-KAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       117 ~iG~G~fG~Vykg~l~--~~~~~vavK~i~~~~~-~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      .||+|+||.||+|...  ..+..||||.+..... .....+..+++.++.-+|++
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpn  397 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPY  397 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTT
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCC
Confidence            7999999999999875  2356799999865322 22233344444444444443

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=95.82  E-value=0.012  Score=47.60  Aligned_cols=50  Identities=18%  Similarity=0.197  Sum_probs=32.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|....   .+|+|.+....  ......+..+++.++.-++++
T Consensus        30 ~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   81 (289)
T 3og7_A           30 QRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN   81 (289)
T ss_dssp             EEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTT
T ss_pred             eEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCc
Confidence            789999999999998643   48999885432  223333444555555544444

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=95.81  E-value=0.0054  Score=50.48  Aligned_cols=51  Identities=18%  Similarity=0.214  Sum_probs=33.6

Q ss_pred             cEEcccCCceEEEEEEc----CCCeeeeeeeecccch-h---hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLR----ETNSFFSNWNVQLKHG-K---AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~----~~~~~vavK~i~~~~~-~---~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||++...    .++..+|+|.+..... .   ....+....+.++|+|-
T Consensus        37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   95 (318)
T 3lxp_A           37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI   95 (318)
T ss_dssp             EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             heecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcch
Confidence            78999999999888642    3578899999965432 1   22334444555666553

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=95.79  E-value=0.0084  Score=50.38  Aligned_cols=51  Identities=18%  Similarity=0.192  Sum_probs=35.5

Q ss_pred             cEEcccCCceEEEEEEc---CCCeeeeeeeecccc-------hhhHHHHHHHHHHHh-CCCC
Q 047282          116 GKLGQGGFGGVDKGFLR---ETNSFFSNWNVQLKH-------GKAVALCKGLFRDIR-NPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~---~~~~~vavK~i~~~~-------~~~~~~~~~~~~~Ir-~~n~  166 (187)
                      ..||+|+||.||++...   .++..+|+|.+....       ......+...++.++ |+|-
T Consensus        60 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i  121 (355)
T 1vzo_A           60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL  121 (355)
T ss_dssp             EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTB
T ss_pred             EEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCce
Confidence            78999999999999983   357899999985421       122334555566674 6653

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=95.76  E-value=0.013  Score=47.85  Aligned_cols=47  Identities=13%  Similarity=0.201  Sum_probs=33.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--h---hhHHHHHHHHHHHhC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--G---KAVALCKGLFRDIRN  163 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~---~~~~~~~~~~~~Ir~  163 (187)
                      ..||+|+||.||++.... +..+|+|.+....  .   .....+......++|
T Consensus        34 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~   85 (313)
T 3cek_A           34 KQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ   85 (313)
T ss_dssp             EEEECCSSEEEEEEECTT-CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGG
T ss_pred             EEecCCCCEEEEEEEcCC-CcEEEEEEeccccccccchHHHHHHHHHHHhccc
Confidence            789999999999999865 7889999985432  1   222334444556664

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=95.74  E-value=0.011  Score=54.53  Aligned_cols=30  Identities=23%  Similarity=0.298  Sum_probs=27.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++....++..+|||.+..
T Consensus       347 ~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~  376 (674)
T 3pfq_A          347 MVLGKGSFGKVMLSERKGTDELYAVKILKK  376 (674)
T ss_dssp             EESSBTTTBCEEEEEESSSCCEEEEEEEEH
T ss_pred             EEEccCCCEEEEEEEECCCCcEEEEEEEec
Confidence            789999999999999988888999999865

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=95.59  E-value=0.0095  Score=49.63  Aligned_cols=31  Identities=23%  Similarity=0.275  Sum_probs=20.7

Q ss_pred             cEEcccCCceEEEEEEcC---CCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRE---TNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~---~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....   .+..+|+|.+...
T Consensus        43 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~   76 (345)
T 2v62_A           43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQE   76 (345)
T ss_dssp             EEC------CEEEEEESSSCGGGCCEEEEEEECC
T ss_pred             eeEeecCCeEEEEEEecCCCCccceEEEEeeecC
Confidence            789999999999999875   5678999998654

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=95.56  E-value=0.016  Score=48.54  Aligned_cols=31  Identities=19%  Similarity=0.185  Sum_probs=25.0

Q ss_pred             cEEcccCCceEEEEEEcCC-----Ceeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRET-----NSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~-----~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....+     +..+|+|.+...
T Consensus        41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~   76 (364)
T 3op5_A           41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSD   76 (364)
T ss_dssp             EECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETT
T ss_pred             EEEecCCCeEEEEeeecCccccccccceEEEEeecc
Confidence            8899999999999998653     467999998654

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=95.54  E-value=0.016  Score=49.34  Aligned_cols=56  Identities=16%  Similarity=0.060  Sum_probs=34.7

Q ss_pred             cEEcccCCceEEEEEEcCC---Ceeeeeeeecccc-hhhHHHHHHHHHHHhCCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRET---NSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTGPYGGE  171 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~---~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~~~~~  171 (187)
                      ..||+|+||.||+|.....   ...+|+|.+.... ......+..++..+++-+|++.-.
T Consensus        95 ~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~  154 (373)
T 3c1x_A           95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS  154 (373)
T ss_dssp             EEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCC
T ss_pred             cEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            7899999999999987532   2368999886432 223334444554444444444333

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=95.50  E-value=0.017  Score=47.52  Aligned_cols=30  Identities=20%  Similarity=0.310  Sum_probs=25.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeee--eeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFF--SNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~v--avK~i~~  145 (187)
                      ..||+|+||.||+|....++..+  |+|.+..
T Consensus        31 ~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~   62 (327)
T 1fvr_A           31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE   62 (327)
T ss_dssp             EEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred             eeeecCCCceEEEEEEccCCcccceeeeeecc
Confidence            78999999999999987767654  9998864

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=95.44  E-value=0.018  Score=52.86  Aligned_cols=30  Identities=17%  Similarity=0.188  Sum_probs=26.2

Q ss_pred             cEEcccCCceEEEEEEcC-CCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRE-TNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-~~~~vavK~i~~  145 (187)
                      ..||+|+||.||++.... ++..||||.+..
T Consensus        86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~  116 (681)
T 2pzi_A           86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVH  116 (681)
T ss_dssp             EEEEEETTEEEEEEEEGGGTTEEEEEEESCS
T ss_pred             EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCc
Confidence            789999999999999864 578999998864

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=95.28  E-value=0.016  Score=46.43  Aligned_cols=30  Identities=27%  Similarity=0.351  Sum_probs=17.7

Q ss_pred             cEEcccCCceEEEEEEcC-CC--eeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRE-TN--SFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-~~--~~vavK~i~~  145 (187)
                      ..||+|+||.||+|.... ++  ..+|+|.+..
T Consensus        24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~   56 (291)
T 1u46_A           24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKP   56 (291)
T ss_dssp             EECC----CCCEEEEEECTTSCEEEEEEEC---
T ss_pred             eeecCCCceeEEEEEeccCCCceeEEEEEEEcc
Confidence            789999999999998643 22  3689999864

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=95.07  E-value=0.029  Score=51.58  Aligned_cols=50  Identities=16%  Similarity=0.199  Sum_probs=32.5

Q ss_pred             cEEcccCCceEEEEEEcC---CCeeeeeeeecccch-h---hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE---TNSFFSNWNVQLKHG-K---AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~---~~~~vavK~i~~~~~-~---~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....   .+..+|+|.+..... .   ....+....+.++|||
T Consensus       396 ~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~Hpn  452 (656)
T 2j0j_A          396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH  452 (656)
T ss_dssp             EEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTT
T ss_pred             eEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCC
Confidence            789999999999999853   245789998854322 1   2223333444556655

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=94.90  E-value=0.041  Score=45.10  Aligned_cols=29  Identities=14%  Similarity=-0.010  Sum_probs=25.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|.. .++..+|+|.+..
T Consensus        96 ~~iG~G~~g~Vy~~~~-~~g~~valK~~~~  124 (282)
T 1zar_A           96 KLMGEGKESAVFNCYS-EKFGECVVKFHKV  124 (282)
T ss_dssp             EEEEECSSEEEEEEEE-TTTEEEEEEEECC
T ss_pred             CEeccCCCceEEEEEe-CCCCEEEEEEEEC
Confidence            7899999999999999 5589999999854

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=94.33  E-value=0.014  Score=54.47  Aligned_cols=51  Identities=20%  Similarity=0.286  Sum_probs=36.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc-h---hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH-G---KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~-~---~~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|+|.+.... .   .....+....+.++|||-
T Consensus        20 ~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnI   74 (676)
T 3qa8_A           20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV   74 (676)
T ss_dssp             CCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTB
T ss_pred             EEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCC
Confidence            78999999999999988778999999986532 1   122334445556677664

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=93.61  E-value=0.062  Score=48.30  Aligned_cols=50  Identities=10%  Similarity=-0.035  Sum_probs=28.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc-----------hhhHHHHHHHHHHHhCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH-----------GKAVALCKGLFRDIRNPTGP  167 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~-----------~~~~~~~~~~~~~Ir~~n~~  167 (187)
                      ++||+|+||.||+|...  +..+++|+.....           ......+....+.++|+|-.
T Consensus       342 ~~LG~G~fg~Vy~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv  402 (540)
T 3en9_A          342 HLIGKGAEADIKRDSYL--DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIP  402 (540)
T ss_dssp             ------CCEEEEEEECS--SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCC
T ss_pred             CEEeeCCCEEEEEEEEC--CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcC
Confidence            78999999999999543  5678888763321           01123445566678888765

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=92.52  E-value=0.071  Score=46.66  Aligned_cols=28  Identities=7%  Similarity=-0.153  Sum_probs=24.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeec
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQ  144 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~  144 (187)
                      ..||+|+||.||+|..++ |..+|||.+.
T Consensus       101 ~~IG~Gk~a~VY~a~d~~-G~~vAvKi~r  128 (397)
T 4gyi_A          101 SRIGVGKESDIMIVADEK-GKQKVLKIHR  128 (397)
T ss_dssp             EEEEECSSEEEEEEECTT-CCEEEEEEEC
T ss_pred             CEeeeCCceEEEEEECCC-CCEEEEEEEe
Confidence            889999999999999875 8899999753

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=91.76  E-value=0.043  Score=44.51  Aligned_cols=27  Identities=22%  Similarity=0.330  Sum_probs=23.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....   .+|+|.+..
T Consensus        39 ~~lg~G~~g~V~~~~~~~---~~avk~~~~   65 (319)
T 2y4i_B           39 ELIGKGRFGQVYHGRWHG---EVAIRLIDI   65 (319)
T ss_dssp             CBCCCSSSSEEEEEEESS---SEEEEECCC
T ss_pred             eEeccCCceEEEEEEEcC---eEEEEEeec
Confidence            889999999999999854   489998854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	187
g1qmo.1	230	b.29.1.1 (A:,E:) Legume lectin {Field bean (Dolich	7e-13
d1v6ia_	232	b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypog	1e-12
d1qnwa_	237	b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus	2e-12
d1nlsa_	237	b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia	2e-12
d1gzca_	239	b.29.1.1 (A:) Legume lectin {Cockspur coral tree (	3e-12
d1hqla_	236	b.29.1.1 (A:) Legume lectin {Griffonia simplicifol	2e-11
d1g7ya_	253	b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos	2e-11
d1ukga_	241	b.29.1.1 (A:) Legume lectin {Bloodwood tree (Ptero	3e-11
d1avba_	226	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	6e-11
d1n47a_	233	b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia vi	1e-10
d1f9ka_	234	b.29.1.1 (A:) Legume lectin {Winged bean (Psophoca	1e-10
d1leda_	243	b.29.1.1 (A:) Legume lectin {West-central african	1e-10
g2ltn.1	229	b.29.1.1 (A:,B:) Legume lectin {Garden pea (Pisum	1e-10
d1ioaa_	228	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	1e-10
d1g8wa_	233	b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also ar	3e-10
d1fx5a_	240	b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus	5e-10
d1g9fa_	251	b.29.1.1 (A:) Legume lectin {Soybean (Glycine max)	5e-10
d2d3sa1	237	b.29.1.1 (A:1-237) Legume lectin {Winged bean (Pso	6e-10
d1dhkb_	204	b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also ar	1e-09
d1fnya_	237	b.29.1.1 (A:) Legume lectin {Black locust (Robinia	2e-09
d1dbna_	239	b.29.1.1 (A:) Legume lectin {Maackia amurensis, le	7e-09
d1gv9a_	228	b.29.1.13 (A:) Carbohydrate-recognition domain of	0.003

>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 232

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Peanut (Arachis hypogaea) [TaxId: 3818]

 Score = 61.7 bits (149), Expect = 1e-12
 Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           +  SG   +  + Y+SST  LSVA T    +      +   VDL+  LPE V FGFS   
Sbjct: 154 NSVSGAVVKVTVIYDSSTKTLSVAVTNDNGDITT---IAQVVDLKAKLPERVKFGFSASG 210

Query: 67  GVDFT-IFSIYLWEFNSSLE 85
            +    I  I  W F S+L 
Sbjct: 211 SLGGRQIHLIRSWSFTSTLI 230

>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-II [TaxId: 3902]

 Score = 61.2 bits (148), Expect = 2e-12
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           D ++G   +  I+Y + T +L+V  +   + +  +  +   VDL+  LPE+V+ GFS   
Sbjct: 159 DWRNGEVADVVITYRAPTKSLTVCLSYPSDGTSNI--ITASVDLKAILPEWVSVGFSGGV 216

Query: 67  G--VDFTIFSIYLWEFNSSLE 85
           G   +F    +  W F S+LE
Sbjct: 217 GNAAEFETHDVLSWYFTSNLE 237

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

 Score = 61.1 bits (148), Expect = 2e-12
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 3/90 (3%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           ++++G+   A I YNS    LS   +    +S     + Y VDL   LPE+V  G S  T
Sbjct: 41  NMQNGKVGTAHIIYNSVDKRLSAVVSYPNADSAT---VSYDVDLDNVLPEWVRVGLSAST 97

Query: 67  GVDFTIFSIYLWEFNSSLEMDDETTNPVSN 96
           G+     +I  W F S L+ +        +
Sbjct: 98  GLYKETNTILSWSFTSKLKSNSTHETNALH 127

>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]} Length = 239

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]

 Score = 60.8 bits (147), Expect = 3e-12
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 5/81 (6%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
            + +G+     I Y++ +  L V       +S  +  +   VD++Q LP++V  G S  T
Sbjct: 159 QLDNGQVANVVIKYDAPSKILHVVLVY--PSSGAIYTIAEIVDVKQVLPDWVDVGLSGAT 216

Query: 67  GVDFTIFS---IYLWEFNSSL 84
           G          +Y W F +SL
Sbjct: 217 GAQRDAAETHDVYSWSFQASL 237

>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]} Length = 236

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

 Score = 58.9 bits (142), Expect = 2e-11
 Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 2   YLLRSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFG 61
               SD+ SG+   A ISY+ S   L+V  +    +  +   L + VD+RQ+LPE V  G
Sbjct: 156 RWEDSDIFSGKIATARISYDGSAEILTVVLSYPDGSDYI---LSHSVDMRQNLPESVRVG 212

Query: 62  FSMETGVD-FTIFSIYLWEFNSSL 84
            S  TG + F    I  W F+S+L
Sbjct: 213 ISASTGNNQFLTVYILSWRFSSNL 236

>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]} Length = 253

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]

 Score = 59.0 bits (142), Expect = 2e-11
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 6/91 (6%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
            + +G+  E  I+YN++T  L  +       +  +  +  +VD+   LPE+V+ GFS  T
Sbjct: 155 GLANGQNAEILITYNAATSLLVASLVHPSRRTSYI--VSERVDITNELPEYVSIGFSATT 212

Query: 67  GVDFTIFS---IYLWEFNSSLEMDDETTNPV 94
           G+         +  W F S L  DD TT P+
Sbjct: 213 GLSEGYTETHDVLSWSFASKLP-DDSTTEPL 242

>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]} Length = 241

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]

 Score = 58.2 bits (140), Expect = 3e-11
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 3/79 (3%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           D + G+     +++N ST NL V  T           + Y+VD+R  LPE+V  GFS  +
Sbjct: 163 DRRDGQSLNVLVTFNPSTRNLDVVATYSDGTRYE---VSYEVDVRSVLPEWVRVGFSAAS 219

Query: 67  GVDFTIFSIYLWEFNSSLE 85
           G  +   ++  W F S+L 
Sbjct: 220 GEQYQTHTLESWSFTSTLL 238

>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 226

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score = 57.0 bits (137), Expect = 6e-11
 Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 5/81 (6%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
              +G + E  I+Y+S  ++L V+      +S     +   V L + + ++V+ GFS  +
Sbjct: 147 GHNNGEKAEVRITYDSPKNDLRVSLLY--PSSEEKCHVSATVPLEKEVEDWVSVGFSATS 204

Query: 67  GVDFTIFS---IYLWEFNSSL 84
           G          +  W F+S+ 
Sbjct: 205 GSKKETTETHNVLSWSFSSNF 225

>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]} Length = 233

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]

 Score = 56.7 bits (136), Expect = 1e-10
 Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 5/79 (6%)

Query: 9   KSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGV 68
             G +    I+Y +ST  L+ +       S     +  +VDLR  LPE+V  GFS  TG+
Sbjct: 156 VYGEKANIVITYQASTKALAASLVF--PVSQTSYAVSARVDLRDILPEYVRVGFSATTGL 213

Query: 69  DFTIFS---IYLWEFNSSL 84
           +  +     I  W F  SL
Sbjct: 214 NAGVVETHDIVSWSFAVSL 232

>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]} Length = 234

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]

 Score = 56.6 bits (136), Expect = 1e-10
 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 7/83 (8%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLP--EFVTFGFSM 64
            +++G      I Y+S T  L+V      ++   +  L   VDL+Q  P  E+V  G S 
Sbjct: 154 QLENGGVANVVIKYDSPTKILNVVLAF--HSVGTVYTLSNIVDLKQEFPNSEWVNVGLSA 211

Query: 65  ETGVDFTIFS---IYLWEFNSSL 84
            TG          I  W F SSL
Sbjct: 212 TTGYQKNAVETHEIISWSFTSSL 234

>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]} Length = 243

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: West-central african legume (Griffonia simplicifolia) [TaxId: 3850]

 Score = 56.3 bits (135), Expect = 1e-10
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)

Query: 6   SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSME 65
            D        A I+Y++ +  L+V  +       +   L + VDL + LP+ V  GFS  
Sbjct: 164 DDAYGSSIATAHITYDARSKILTVLLSYEHGRDYI---LSHVVDLAKVLPQKVRIGFSAG 220

Query: 66  TGVDFTIFSIYLWEFNSSLE 85
            G D  +  I  W F S+L+
Sbjct: 221 VGYD-EVTYILSWHFFSTLD 239

>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]} Length = 228

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]

 Score = 56.3 bits (135), Expect = 1e-10
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 5/82 (6%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
              +G + +  I+Y+SS ++L V        S V   +   V L + + E+V+ GFS  +
Sbjct: 149 HKYNGEKTDVQITYDSSNNDLRVFLHF--TVSQVKCSVSATVHLEKEVDEWVSVGFSPTS 206

Query: 67  GVDFTIFS---IYLWEFNSSLE 85
           G+         +  W F+S   
Sbjct: 207 GLTEDTTETHDVLSWSFSSKFR 228

>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 233

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score = 55.5 bits (133), Expect = 3e-10
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           D  +G   E  I+Y+SST+ L  +       +  +  +   VDL+  LPE+V+ GFS  T
Sbjct: 154 DFVNGENAEVLITYDSSTNLLVASLVYPSQKTSFI--VSDTVDLKSVLPEWVSVGFSATT 211

Query: 67  GV---DFTIFSIYLWEFNSSL 84
           G+   +     +  W F S L
Sbjct: 212 GINKGNVETNDVLSWSFASKL 232

>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]} Length = 240

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-I [TaxId: 3902]

 Score = 54.7 bits (131), Expect = 5e-10
 Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 6   SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSME 65
                       I Y +S+  L+ + T    +      +   VDL++ LPE+V+ GFS  
Sbjct: 160 KRYGLNNVANVEIIYEASSKTLTASLTY--PSDQTSISVTSIVDLKEILPEWVSVGFSGS 217

Query: 66  TGVDFT-IFSIYLWEFNSSLE 85
           T +       +  W F S+  
Sbjct: 218 TYIGRQATHEVLNWYFTSTFI 238

>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]} Length = 251

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 54.8 bits (131), Expect = 5e-10
 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 4/94 (4%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           D+ + +  +  I+Y++ST  L  +             L   VDL+  LPE+V  GFS  T
Sbjct: 155 DLANNKVAKVLITYDASTSLLVASLVYPSQR--TSNILSDVVDLKTSLPEWVRIGFSAAT 212

Query: 67  G--VDFTIFSIYLWEFNSSLEMDDETTNPVSNPK 98
           G  +      +  W F S+L       +P+    
Sbjct: 213 GLDIPGESHDVLSWSFASNLPHASSNIDPLDLTS 246

>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]

 Score = 54.3 bits (130), Expect = 6e-10
 Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 9/83 (10%)

Query: 9   KSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGV 68
            +G      I Y++ST  L V        ++    +   VDL+Q LPE V  GFS  TG 
Sbjct: 155 DNGGIANVVIKYDASTKILHVVLVFPSLGTI--YTIADIVDLKQVLPESVNVGFSAATGD 212

Query: 69  DFTIFS-------IYLWEFNSSL 84
                        I  W F++SL
Sbjct: 213 PSGKQRNATETHDILSWSFSASL 235

>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 204

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

 Score = 52.8 bits (126), Expect = 1e-09
 Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 5/81 (6%)

Query: 6   SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSME 65
                G+  E  I+YNSST   SV+ +           +   V+L + + ++V+ GFS  
Sbjct: 125 VHDYDGQNAEVRITYNSSTKVFSVSLSNPSTG--KSNNVSTTVELEKEVYDWVSVGFSAT 182

Query: 66  TGV---DFTIFSIYLWEFNSS 83
           +G     +    +  W F+S 
Sbjct: 183 SGAYQWSYETHDVLSWSFSSK 203

>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]} Length = 237

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Black locust (Robinia pseudoacacia) [TaxId: 35938]

 Score = 53.3 bits (127), Expect = 2e-09
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           +  +G     +ISY +ST +L+ +      +      +D  VD++  LPE+V FGFS  T
Sbjct: 157 NWTNGEVANVFISYEASTKSLTASLVY--PSLETSFIIDAIVDVKIVLPEWVRFGFSATT 214

Query: 67  GVDFTIFS---IYLWEFNSSL 84
           G+D        +  W F S+L
Sbjct: 215 GIDKGYVQTNDVLSWSFESNL 235

>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]} Length = 239

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Maackia amurensis, leukoagglutinin [TaxId: 37501]

 Score = 51.3 bits (122), Expect = 7e-09
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 4/80 (5%)

Query: 7   DVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMET 66
           D  +G    A I+Y +    L  +     N +     +   VDL++ LPE+V  GFS  T
Sbjct: 162 DWINGGVAFATITYLAPNKTLIASLVYPSNQTTFS--VAASVDLKEILPEWVRVGFSAAT 219

Query: 67  GV--DFTIFSIYLWEFNSSL 84
           G   +     +  W F S+L
Sbjct: 220 GYPTEVETHDVLSWSFTSTL 239

>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 228

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Carbohydrate-recognition domain of P58/ERGIC-53
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 35.1 bits (80), Expect = 0.003
 Identities = 10/73 (13%), Positives = 18/73 (24%), Gaps = 3/73 (4%)

Query: 10  SGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVD 69
                 A I+Y   T  + +      + +               +P    FG S  TG  
Sbjct: 156 KPYPVRAKITYYQKTLTVMINNGFTPDKNDY---EFCAKVENMVIPTQGHFGISAATGGL 212

Query: 70  FTIFSIYLWEFNS 82
                +  +    
Sbjct: 213 ADDHDVLSFLTFQ 225

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	187
d1qnwa_	237	Legume lectin {Furze (Ulex europaeus), UEA-II [Tax	99.81
d1hqla_	236	Legume lectin {Griffonia simplicifolia, lectin I-b	99.81
d1gzca_	239	Legume lectin {Cockspur coral tree (Erythrina cris	99.81
d1nlsa_	237	Concanavalin A {Jack bean (Canavalia ensiformis) [	99.81
d1g9fa_	251	Legume lectin {Soybean (Glycine max) [TaxId: 3847]	99.8
d2d3sa1	237	Legume lectin {Winged bean (Psophocarpus tetragono	99.8
d1ioaa_	228	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	99.8
d1fx5a_	240	Legume lectin {Furze (Ulex europaeus), UEA-I [TaxI	99.79
d1leda_	243	Legume lectin {West-central african legume (Griffo	99.79
d1f9ka_	234	Legume lectin {Winged bean (Psophocarpus tetragono	99.78
d1dhkb_	204	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	99.78
d1ukga_	241	Legume lectin {Bloodwood tree (Pterocarpus angolen	99.78
d1g7ya_	253	Legume lectin {Horse gram (Dolichos biflorus), dif	99.78
d1n47a_	233	Legume lectin {Hairy vetch (Vicia villosa), isolec	99.78
g1qmo.1	230	Legume lectin {Field bean (Dolichos lablab), Fril	99.77
d1fnya_	237	Legume lectin {Black locust (Robinia pseudoacacia)	99.76
d1v6ia_	232	Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3	99.75
d1g8wa_	233	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	99.74
d1avba_	226	Phytohemagglutinin-L, PHA-L, also arcelin {Kidney	99.72
d1dbna_	239	Legume lectin {Maackia amurensis, leukoagglutinin	99.72
g2ltn.1	229	Legume lectin {Garden pea (Pisum sativum) [TaxId:	99.71
d1gv9a_	228	Carbohydrate-recognition domain of P58/ERGIC-53 {R	98.83
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	98.06
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	98.03
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	98.03
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	97.98
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	97.95
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	97.9
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	97.9
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	97.89
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	97.88
d2a6va1	218	Emp46p N-terminal domain {Baker's yeast (Saccharom	97.86
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	97.86
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	97.84
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	97.83
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	97.83
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	97.83
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	97.82
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	97.82
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	97.8
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	97.79
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	97.79
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	97.79
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	97.79
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	97.78
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	97.78
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	97.76
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	97.76
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	97.76
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	97.74
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	97.74
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	97.73
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	97.72
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	97.72
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	97.71
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	97.7
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	97.7
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	97.69
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	97.69
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	97.69
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	97.68
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	97.66
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	97.65
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	97.62
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	97.58
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	97.57
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	97.56
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	97.55
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	97.54
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	97.53
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	97.51
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	97.5
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	97.5
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	97.49
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	97.48
d2a6za1	221	Emp47p N-terminal domain {Baker's yeast (Saccharom	97.48
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	97.46
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	97.34
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	97.33
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	97.31
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	97.28
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	97.27
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	97.18
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	97.17
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	97.16
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	96.98
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	96.84

>d1qnwa_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-II [TaxId: 3902]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-II [TaxId: 3902]

Probab=99.81  E-value=1.1e-20  Score=154.10  Aligned_cols=77  Identities=30%  Similarity=0.476  Sum_probs=70.7

Q ss_pred             cccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCC--ccccceeeeeeccC
Q 047282            6 SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVD--FTIFSIYLWEFNSS   83 (187)
Q Consensus         6 ~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~--~~~h~i~sW~F~~~   83 (187)
                      .++.+|+.++|||+||+.+++|+|+|++..  +|..|+|+..+||+++|+++||||||||||..  .|.|+|++|+|+++
T Consensus       158 ~~~~~G~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~p~ls~~vDLs~~l~~~vyvGFSasTG~~~~~q~h~I~sWsF~s~  235 (237)
T d1qnwa_         158 WDWRNGEVADVVITYRAPTKSLTVCLSYPS--DGTSNIITASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLSWYFTSN  235 (237)
T ss_dssp             CCCCTTCCEEEEEEEEGGGTEEEEEEECTT--TCCEEEEEEECCHHHHSCSEEEEEEEEEESCGGGCBCCEEEEEEEEEE
T ss_pred             cccCCCcEEEEEEEEcCCCcEEEEEEecCC--CCccceEEEEEChHHhCCCcEEEEEEeECCCCCCccEeEEEEeEeEEe
Confidence            457899999999999999999999998764  68899999999999999999999999999975  48999999999987


Q ss_pred             C
Q 047282           84 L   84 (187)
Q Consensus        84 ~   84 (187)
                      +
T Consensus       236 l  236 (237)
T d1qnwa_         236 L  236 (237)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d1hqla_ b.29.1.1 (A:) Legume lectin {Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Griffonia simplicifolia, lectin I-b4 [TaxId: 3850]

Probab=99.81  E-value=2e-20  Score=152.81  Aligned_cols=77  Identities=39%  Similarity=0.501  Sum_probs=69.7

Q ss_pred             ccccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCC-ccccceeeeeeccC
Q 047282            5 RSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVD-FTIFSIYLWEFNSS   83 (187)
Q Consensus         5 ~~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~-~~~h~i~sW~F~~~   83 (187)
                      +.++.+|+.++|||+||+.+++|+|+|++.   +|..|+|++.+||+++|+++||||||||||.. .+.|+|++|+|+++
T Consensus       159 ~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~---~~~~~~ls~~vdL~~~l~~~v~vGFSasTG~~~~~~h~I~sWsF~s~  235 (236)
T d1hqla_         159 DSDIFSGKIATARISYDGSAEILTVVLSYP---DGSDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRFSSN  235 (236)
T ss_dssp             HHHHTSCSCEEEEEEEETTTTEEEEEEEET---TTEEEEEEEECCGGGTSCSEEEEEEEEECCSCCCEEEEEEEEEEEEE
T ss_pred             cccccCCCEEEEEEEEeCCCcEEEEEEecC---CCCCeeEEEEeCHHHhCCCcEEEEEEeECCCCCceEEEEEEeEeEec
Confidence            356899999999999999999999999975   46789999999999999999999999999974 67899999999976


Q ss_pred             C
Q 047282           84 L   84 (187)
Q Consensus        84 ~   84 (187)
                      +
T Consensus       236 l  236 (236)
T d1hqla_         236 L  236 (236)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1gzca_ b.29.1.1 (A:) Legume lectin {Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]

Probab=99.81  E-value=2e-20  Score=152.77  Aligned_cols=78  Identities=27%  Similarity=0.447  Sum_probs=71.5

Q ss_pred             cccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCC---Cccccceeeeeecc
Q 047282            6 SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGV---DFTIFSIYLWEFNS   82 (187)
Q Consensus         6 ~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~---~~~~h~i~sW~F~~   82 (187)
                      .++.+|+.++|||+||+.+++|+|+|++..  +|..|+|+..+||+++|+++|||||||+||.   ..|.|+|++|+|++
T Consensus       158 ~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~~~~H~V~sWsF~s  235 (239)
T d1gzca_         158 FQLDNGQVANVVIKYDAPSKILHVVLVYPS--SGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQA  235 (239)
T ss_dssp             CCCCTTCEEEEEEEEETTTTEEEEEEECTT--TCCEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEEEEE
T ss_pred             ccccCCCEEEEEEEEeCCCcEEEEEEecCC--CCcceeeeeEechHHhcCCcEEEEEEEEcCCCCCCceeeEEEEEEeEe
Confidence            468899999999999999999999998765  6889999999999999999999999999995   46899999999998


Q ss_pred             CCC
Q 047282           83 SLE   85 (187)
Q Consensus        83 ~~~   85 (187)
                      +++
T Consensus       236 ~lp  238 (239)
T d1gzca_         236 SLP  238 (239)
T ss_dssp             EEC
T ss_pred             eCC
Confidence            864

>d1nlsa_ b.29.1.1 (A:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Concanavalin A
species: Jack bean (Canavalia ensiformis) [TaxId: 3823]

Probab=99.81  E-value=3.7e-20  Score=151.33  Aligned_cols=81  Identities=31%  Similarity=0.475  Sum_probs=74.2

Q ss_pred             ccccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeeeeeccCC
Q 047282            5 RSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSSL   84 (187)
Q Consensus         5 ~~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~F~~~~   84 (187)
                      ++++.+|+.++|||+||+.+++|+|++.+.   +|..|+|++.+||+++|+++|||||+||||...+.|+|++|+|++.+
T Consensus        39 ~~~l~~G~~~~v~I~Yd~~~~~L~V~~~~~---~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~h~I~sWsFsS~~  115 (237)
T d1nlsa_          39 KWNMQNGKVGTAHIIYNSVDKRLSAVVSYP---NADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKL  115 (237)
T ss_dssp             ECCCCTTCEEEEEEEEETTTTEEEEEEECT---TSCCEEEEEECCGGGTSCSEEEEEEEEECSSSCCCCEEEEEEEEEEE
T ss_pred             cccccCCCEEEEEEEEecCCcEEEEEEecC---CCCCeEEEEEEChHHhCCCcEEEEEEeecCCCccceEEEEEEEEeec
Confidence            356899999999999999999999999864   46789999999999999999999999999999999999999999988


Q ss_pred             CCCC
Q 047282           85 EMDD   88 (187)
Q Consensus        85 ~~~~   88 (187)
                      ....
T Consensus       116 ~~~s  119 (237)
T d1nlsa_         116 KSNS  119 (237)
T ss_dssp             EESS
T ss_pred             cccc
Confidence            6554

>d1g9fa_ b.29.1.1 (A:) Legume lectin {Soybean (Glycine max) [TaxId: 3847]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.80  E-value=4e-20  Score=152.02  Aligned_cols=82  Identities=29%  Similarity=0.447  Sum_probs=71.9

Q ss_pred             ccccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCc--cccceeeeeecc
Q 047282            5 RSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDF--TIFSIYLWEFNS   82 (187)
Q Consensus         5 ~~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~--~~h~i~sW~F~~   82 (187)
                      +.++.+|+.++|||+||+.+++|+|++++..  +|..|+++..+||+.+|+++||||||||||...  |.|+|++|+|++
T Consensus       153 ~~~l~~g~~~~v~I~Yd~~~~~L~v~l~~~~--~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~~~~~~h~I~sWsF~s  230 (251)
T d1g9fa_         153 SWDLANNKVAKVLITYDASTSLLVASLVYPS--QRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFAS  230 (251)
T ss_dssp             ECCCCTTCCEEEEEEEETTTTEEEEEEEEGG--GTEEEEEEEECCC-CCSCSEEEEEEEEEECSSSCCCEEEEEEEEEEE
T ss_pred             ceEecCCCEEEEEEEEECCccEEEEEEecCC--CCcceeEEEEecchhhCCCcEEEEEEeecCCCCCCceeEEEEeEeEC
Confidence            3568899999999999999999999998754  688999999999999999999999999999754  889999999999


Q ss_pred             CCCCCC
Q 047282           83 SLEMDD   88 (187)
Q Consensus        83 ~~~~~~   88 (187)
                      .++++.
T Consensus       231 ~~~~~~  236 (251)
T d1g9fa_         231 NLPHAS  236 (251)
T ss_dssp             EECC--
T ss_pred             CCCCCC
Confidence            876653

>d2d3sa1 b.29.1.1 (A:1-237) Legume lectin {Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), basic agglutinin [TaxId: 3891]

Probab=99.80  E-value=3.7e-20  Score=151.09  Aligned_cols=79  Identities=32%  Similarity=0.390  Sum_probs=72.1

Q ss_pred             ccccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCC-------Cccccceee
Q 047282            5 RSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGV-------DFTIFSIYL   77 (187)
Q Consensus         5 ~~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~-------~~~~h~i~s   77 (187)
                      +.++.+|+.++|||+||+.+++|+|+|++.+  +|..|+++..+||+.+|+++||||||||||.       ..|.|+|++
T Consensus       151 ~~~l~~G~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSasTG~~~~~~~~~~e~h~I~s  228 (237)
T d2d3sa1         151 PFTLDNGGIANVVIKYDASTKILHVVLVFPS--LGTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDILS  228 (237)
T ss_dssp             ECCCCTTCEEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECCGGGCCTTCCCCCEEEE
T ss_pred             ceeecCCCEEEEEEEEECCCCEEEEEEEcCC--CCcccceeeEechHHhCCCcEEEEEEeECCCCccCccccceeeEEEE
Confidence            3458899999999999999999999999866  4788999999999999999999999999995       469999999


Q ss_pred             eeeccCCC
Q 047282           78 WEFNSSLE   85 (187)
Q Consensus        78 W~F~~~~~   85 (187)
                      |+|+++++
T Consensus       229 WsFss~lp  236 (237)
T d2d3sa1         229 WSFSASLP  236 (237)
T ss_dssp             EEEEEECC
T ss_pred             eEeEeeCC
Confidence            99998875

>d1ioaa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris), G02771, arcelin-5a [TaxId: 3885]

Probab=99.80  E-value=4.3e-20  Score=149.28  Aligned_cols=78  Identities=26%  Similarity=0.401  Sum_probs=70.8

Q ss_pred             ccccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecC---CCccccceeeeeec
Q 047282            5 RSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETG---VDFTIFSIYLWEFN   81 (187)
Q Consensus         5 ~~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG---~~~~~h~i~sW~F~   81 (187)
                      +.++.+|+.++|||+||+.+++|+|+|.+..  +|..|.|+..+||+.+|+++||||||||||   ...|.|+|++|+|+
T Consensus       147 ~~~~~~g~~~~v~I~Yd~~~~~l~V~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~~~~h~I~sWsFs  224 (228)
T d1ioaa_         147 DFHKYNGEKTDVQITYDSSNNDLRVFLHFTV--SQVKCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTTETHDVLSWSFS  224 (228)
T ss_dssp             CHHHHCSSCEEEEEEEETTTTEEEEEEEETT--TCCEEEEEEECCGGGTSCSEEEEEEEEEECSSTTTCBCCEEEEEEEE
T ss_pred             ccccccCcEEEEEEEEcCCCCEEEEEEEeCC--CCceeeEEEEEchHHcCCCcEEEEEEeecCCCCCCceEEEEEEEEeE
Confidence            4567899999999999999999999999764  678899999999999999999999999999   45688999999999


Q ss_pred             cCC
Q 047282           82 SSL   84 (187)
Q Consensus        82 ~~~   84 (187)
                      +++
T Consensus       225 s~~  227 (228)
T d1ioaa_         225 SKF  227 (228)
T ss_dssp             EEE
T ss_pred             Eec
Confidence            865

>d1fx5a_ b.29.1.1 (A:) Legume lectin {Furze (Ulex europaeus), UEA-I [TaxId: 3902]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Furze (Ulex europaeus), UEA-I [TaxId: 3902]

Probab=99.79  E-value=8.9e-20  Score=149.01  Aligned_cols=80  Identities=24%  Similarity=0.317  Sum_probs=72.1

Q ss_pred             eccccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCC-Cccccceeeeeecc
Q 047282            4 LRSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGV-DFTIFSIYLWEFNS   82 (187)
Q Consensus         4 ~~~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~-~~~~h~i~sW~F~~   82 (187)
                      ++..+.+|+.++|||+||+.+++|+|+|.+..  +|..|+|+..|||+.+|+++||||||||||. ..+.|+|++|+|++
T Consensus       158 ~~~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~ls~~vdLs~~l~~~v~vGFSasTG~~~~~~H~I~sWsFss  235 (240)
T d1fx5a_         158 WNKRYGLNNVANVEIIYEASSKTLTASLTYPS--DQTSISVTSIVDLKEILPEWVSVGFSGSTYIGRQATHEVLNWYFTS  235 (240)
T ss_dssp             CCCCCSGGGCEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCGGGTSCSEEEEEEEEEEETTSCEEEEEEEEEEEE
T ss_pred             cccccCCCCeEEEEEEEcCCCCEEEEEEecCC--CceeeEEeEEEchHHhCCCcEEEEEEeECCCCCCceEEEEEEEeEE
Confidence            44567789999999999999999999999765  5788999999999999999999999999995 56899999999998


Q ss_pred             CCC
Q 047282           83 SLE   85 (187)
Q Consensus        83 ~~~   85 (187)
                      ++.
T Consensus       236 t~~  238 (240)
T d1fx5a_         236 TFI  238 (240)
T ss_dssp             ESS
T ss_pred             ecc
Confidence            764

>d1leda_ b.29.1.1 (A:) Legume lectin {West-central african legume (Griffonia simplicifolia) [TaxId: 3850]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: West-central african legume (Griffonia simplicifolia) [TaxId: 3850]

Probab=99.79  E-value=8.7e-20  Score=149.53  Aligned_cols=77  Identities=29%  Similarity=0.323  Sum_probs=70.3

Q ss_pred             cccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeeeeeccCCC
Q 047282            6 SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSSLE   85 (187)
Q Consensus         6 ~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~F~~~~~   85 (187)
                      .++.+|+.++|||+||+.+++|+|+|++.   +|..|+|++.|||+++|+++||||||||||. .+.|+|++|+|++++.
T Consensus       164 ~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~---~~~~p~ls~~idL~~~l~~~vyvGFSAsTG~-~~~h~I~sWsF~s~l~  239 (243)
T d1leda_         164 DDAYGSSIATAHITYDARSKILTVLLSYE---HGRDYILSHVVDLAKVLPQKVRIGFSAGVGY-DEVTYILSWHFFSTLD  239 (243)
T ss_dssp             HHHTSCCEEEEEEEEETTTTEEEEEEEET---TSCEEEEEEECCHHHHSCSEEEEEEEEEECB-SEEEEEEEEEEEEECT
T ss_pred             CCcccCceeEEEEEEECCCCEEEEEEeeC---CCCCceEEEecCHHHhcCCcEEEEEEcccCC-cceeeEEEEEEEeeCC
Confidence            46889999999999999999999999975   4678999999999999999999999999995 5999999999998875


Q ss_pred             C
Q 047282           86 M   86 (187)
Q Consensus        86 ~   86 (187)
                      .
T Consensus       240 ~  240 (243)
T d1leda_         240 G  240 (243)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d1f9ka_ b.29.1.1 (A:) Legume lectin {Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Winged bean (Psophocarpus tetragonolobus), acidic lectin [TaxId: 3891]

Probab=99.78  E-value=1.1e-19  Score=147.92  Aligned_cols=78  Identities=32%  Similarity=0.471  Sum_probs=69.6

Q ss_pred             ccccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCC--ceeEEEEEeecCC---Cccccceeeee
Q 047282            5 RSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLP--EFVTFGFSMETGV---DFTIFSIYLWE   79 (187)
Q Consensus         5 ~~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~--~~v~VGFSasTG~---~~~~h~i~sW~   79 (187)
                      +++|.+|+.++|||+||+.+++|+|++++..  +|..|.|+..|||+++|+  ++||||||||||.   ..|.|+|++|+
T Consensus       152 ~~~l~~G~~~~v~I~Yd~~~~~l~V~l~~~~--~~~~~~ls~~idL~~~l~~~~~v~vGFSasTG~~~~~~~~h~I~sWs  229 (234)
T d1f9ka_         152 HFQLENGGVANVVIKYDSPTKILNVVLAFHS--VGTVYTLSNIVDLKQEFPNSEWVNVGLSATTGYQKNAVETHEIISWS  229 (234)
T ss_dssp             ECCCCTTCCEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSTTCSEEEEEEEEEECSSTTCCCEEEEEEEE
T ss_pred             cccccCCCEEEEEEEEcCCCcEEEEEEEeCC--CCccceEEEEEcHHHhcCCCCEEEEEEEeecCCCCCceeeeEEEEEE
Confidence            3568999999999999999999999999865  477899999999999997  5799999999994   46899999999


Q ss_pred             eccCC
Q 047282           80 FNSSL   84 (187)
Q Consensus        80 F~~~~   84 (187)
                      |++++
T Consensus       230 F~s~l  234 (234)
T d1f9ka_         230 FTSSL  234 (234)
T ss_dssp             EEEEC
T ss_pred             eEEeC
Confidence            99764

>d1dhkb_ b.29.1.1 (B:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=99.78  E-value=1.9e-19  Score=143.29  Aligned_cols=78  Identities=26%  Similarity=0.449  Sum_probs=70.6

Q ss_pred             eccccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCC---ccccceeeeee
Q 047282            4 LRSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVD---FTIFSIYLWEF   80 (187)
Q Consensus         4 ~~~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~---~~~h~i~sW~F   80 (187)
                      +++++.+|+.+.|||+||+.+++|+|++++.+  +|..+.|+..+||+++||++|||||||+||..   .|+|+|++|+|
T Consensus       123 ~~~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~l~~~vdL~~~l~~~~yvGFSAaTG~~~~~~e~H~IlsWsF  200 (204)
T d1dhkb_         123 WDVHDYDGQNAEVRITYNSSTKVFSVSLSNPS--TGKSNNVSTTVELEKEVYDWVSVGFSATSGAYQWSYETHDVLSWSF  200 (204)
T ss_dssp             CCGGGTTTSCEEEEEEEETTTTEEEEEEECTT--TCCEEEEEEECCCCSGGGSEEEEEEEEEECSGGGSCCEEEEEEEEE
T ss_pred             cccEecCCCEEEEEEEEcCCCEEEEEEEecCC--CCCceeEEEEecchhccCCcEEEEEEeecCCCCCCceeeEEEEEEE
Confidence            45678999999999999999999999999876  46778999999999999999999999999964   57899999999


Q ss_pred             ccC
Q 047282           81 NSS   83 (187)
Q Consensus        81 ~~~   83 (187)
                      +++
T Consensus       201 ss~  203 (204)
T d1dhkb_         201 SSK  203 (204)
T ss_dssp             EEE
T ss_pred             Eec
Confidence            975

>d1ukga_ b.29.1.1 (A:) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]

Probab=99.78  E-value=2.3e-19  Score=145.92  Aligned_cols=78  Identities=32%  Similarity=0.546  Sum_probs=71.7

Q ss_pred             ccccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeeeeeccCC
Q 047282            5 RSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSSL   84 (187)
Q Consensus         5 ~~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~F~~~~   84 (187)
                      +.++.+|..++|||+||+.+++|+|++.+.   +|..|.++..+||+.+|+++||||||||||...+.|+|++|+|++++
T Consensus       161 ~~~~~~g~~~~v~I~Yd~~~~~L~v~~~~~---~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~~~~H~IlsWsFss~l  237 (241)
T d1ukga_         161 KWDRRDGQSLNVLVTFNPSTRNLDVVATYS---DGTRYEVSYEVDVRSVLPEWVRVGFSAASGEQYQTHTLESWSFTSTL  237 (241)
T ss_dssp             ECCCCTTCCEEEEEEEETTTTEEEEEEEET---TCCEEEEEEECCGGGTSCSEEEEEEEEEESSSCCEEEEEEEEEEEEE
T ss_pred             ccccCCCcEEEEEEEEeCCCcEEEEEEccC---CCCceEEEEEEehHHhCCCcEEEEEEEecCCCCceeEEEEeEEEEEe
Confidence            356889999999999999999999999875   46778999999999999999999999999999999999999999876


Q ss_pred             C
Q 047282           85 E   85 (187)
Q Consensus        85 ~   85 (187)
                      .
T Consensus       238 ~  238 (241)
T d1ukga_         238 L  238 (241)
T ss_dssp             E
T ss_pred             e
Confidence            4

>d1g7ya_ b.29.1.1 (A:) Legume lectin {Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]

Probab=99.78  E-value=2e-19  Score=147.71  Aligned_cols=80  Identities=28%  Similarity=0.410  Sum_probs=72.3

Q ss_pred             ccccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecC---CCccccceeeeeec
Q 047282            5 RSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETG---VDFTIFSIYLWEFN   81 (187)
Q Consensus         5 ~~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG---~~~~~h~i~sW~F~   81 (187)
                      +.++.+|+.++|||+||+.+++|+|++++..  +|..|+++..+||+.+|+++|||||||+||   ...+.|+|++|+|+
T Consensus       153 ~~~~~~g~~~~v~I~Yd~~~~~L~v~l~~~~--~~~~~~ls~~vdL~~~l~~~~yvGFSAsTG~~~~~~~~H~IlsWsF~  230 (253)
T d1g7ya_         153 SWGLANGQNAEILITYNAATSLLVASLVHPS--RRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFA  230 (253)
T ss_dssp             ECCCCTTSEEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEECCSSSSCCCCCEEEEEEEE
T ss_pred             CCCccCCCEEEEEEEEeCCcEEEEEEEecCC--CCCceEEEEEechhhcCCCcEEEEEEeEcCCCCCcccccEEEEEEeE
Confidence            4568899999999999999999999998754  688999999999999999999999999999   45799999999999


Q ss_pred             cCCCC
Q 047282           82 SSLEM   86 (187)
Q Consensus        82 ~~~~~   86 (187)
                      ++++.
T Consensus       231 s~lp~  235 (253)
T d1g7ya_         231 SKLPD  235 (253)
T ss_dssp             EEECS
T ss_pred             EeCCC
Confidence            87654

>d1n47a_ b.29.1.1 (A:) Legume lectin {Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Hairy vetch (Vicia villosa), isolectin b4 [TaxId: 3911]

Probab=99.78  E-value=2.9e-19  Score=145.07  Aligned_cols=78  Identities=33%  Similarity=0.480  Sum_probs=70.9

Q ss_pred             ccccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCC---Cccccceeeeeec
Q 047282            5 RSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGV---DFTIFSIYLWEFN   81 (187)
Q Consensus         5 ~~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~---~~~~h~i~sW~F~   81 (187)
                      ++++.+|+.++|||+||+.+++|.|++.+..  +|..|.|+..+||+++|+++|||||||+||.   ..|.|+|++|+|+
T Consensus       152 ~~~l~~g~~~~v~I~Y~~~~~~l~v~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~~~~H~I~sWsFs  229 (233)
T d1n47a_         152 PFDMVYGEKANIVITYQASTKALAASLVFPV--SQTSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVETHDIVSWSFA  229 (233)
T ss_dssp             ECCCCTTSCEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCGGGTSCSEEEEEEEEEECSSTTCCCCCEEEEEEEE
T ss_pred             cceecCCCEEEEEEEEcCCCeEEEEEEEeCC--CCccEEEEEEechHHhcCCcEEEEEEEecCCCCCcccccEEEEEEeE
Confidence            3568899999999999999999999998765  5888999999999999999999999999994   5689999999999


Q ss_pred             cCC
Q 047282           82 SSL   84 (187)
Q Consensus        82 ~~~   84 (187)
                      +++
T Consensus       230 s~l  232 (233)
T d1n47a_         230 VSL  232 (233)
T ss_dssp             EEE
T ss_pred             EEc
Confidence            864

>d1fnya_ b.29.1.1 (A:) Legume lectin {Black locust (Robinia pseudoacacia) [TaxId: 35938]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Black locust (Robinia pseudoacacia) [TaxId: 35938]

Probab=99.76  E-value=4.7e-19  Score=143.71  Aligned_cols=79  Identities=30%  Similarity=0.431  Sum_probs=72.0

Q ss_pred             ccccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecC---CCccccceeeeeec
Q 047282            5 RSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETG---VDFTIFSIYLWEFN   81 (187)
Q Consensus         5 ~~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG---~~~~~h~i~sW~F~   81 (187)
                      +.++.+|+..+|||+||+.+++|.|++.+..  ++..|+++..+||+.+|+++|||||||+||   ...|.|+|++|+|+
T Consensus       155 ~~~~~~g~~~~v~I~Y~~~~~~l~v~l~~~~--~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~s~~~e~H~I~sWsF~  232 (237)
T d1fnya_         155 PWNWTNGEVANVFISYEASTKSLTASLVYPS--LETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWSFE  232 (237)
T ss_dssp             ECCCCTTCCEEEEEEEEGGGTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTCCCCCEEEEEEEE
T ss_pred             cccccCCcEEEEEEEEeCCccEEEEEEEeCC--CCcceeEEEEechhhcCCCcEEEEEEEECCCCCCcccccEEEEeEeE
Confidence            4568899999999999999999999999876  578899999999999999999999999999   45689999999999


Q ss_pred             cCCC
Q 047282           82 SSLE   85 (187)
Q Consensus        82 ~~~~   85 (187)
                      +++|
T Consensus       233 s~lp  236 (237)
T d1fnya_         233 SNLP  236 (237)
T ss_dssp             EEEC
T ss_pred             EeCC
Confidence            8764

>d1v6ia_ b.29.1.1 (A:) Legume lectin {Peanut (Arachis hypogaea) [TaxId: 3818]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Peanut (Arachis hypogaea) [TaxId: 3818]

Probab=99.75  E-value=9.5e-19  Score=141.87  Aligned_cols=78  Identities=36%  Similarity=0.437  Sum_probs=70.1

Q ss_pred             ccccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCC-ccccceeeeeeccC
Q 047282            5 RSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVD-FTIFSIYLWEFNSS   83 (187)
Q Consensus         5 ~~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~-~~~h~i~sW~F~~~   83 (187)
                      ..++.+|+.++|||+||+.+++|+|++.+.   ++..|.++..+||+.+|+++||||||||||.. .+.|+|++|+|++.
T Consensus       152 ~~~~~~g~~~~v~I~Yd~~~~~L~V~~~~~---~~~~~~l~~~vdL~~~l~~~vyvGFSAsTG~~~~~~H~I~sWsFss~  228 (232)
T d1v6ia_         152 PWNSVSGAVVKVTVIYDSSTKTLSVAVTND---NGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIHLIRSWSFTST  228 (232)
T ss_dssp             ECCCCTTCEEEEEEEEETTTTEEEEEEECT---TSCEEEEEEECCHHHHSCSEEEEEEEEECCSSBCCEEEEEEEEEEEE
T ss_pred             ccccCCCCEEEEEEEEeCCceEEEEEEecC---CCCcceEEEEEchhhccCCcEEEEEEEECCCCCCcccEEEEeEeEEe
Confidence            346889999999999999999999999864   46678999999999999999999999999974 69999999999987


Q ss_pred             CC
Q 047282           84 LE   85 (187)
Q Consensus        84 ~~   85 (187)
                      +.
T Consensus       229 l~  230 (232)
T d1v6ia_         229 LI  230 (232)
T ss_dssp             EC
T ss_pred             ee
Confidence            64

>d1g8wa_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=99.74  E-value=1.6e-18  Score=140.75  Aligned_cols=78  Identities=33%  Similarity=0.493  Sum_probs=70.6

Q ss_pred             ccccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCC---Cccccceeeeeec
Q 047282            5 RSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGV---DFTIFSIYLWEFN   81 (187)
Q Consensus         5 ~~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~---~~~~h~i~sW~F~   81 (187)
                      +.++.+|+...|||+||+.+++|.|++.+..  +|..|+++..+||+.+||++|||||||+||.   ..|.|+|++|+|+
T Consensus       152 ~~~~~~g~~~~~~I~yd~~~~~l~v~l~~~~--~~~~~~l~~~vdL~~~l~~~~yvGFSAsTG~~~~~~~~h~I~sWsFs  229 (233)
T d1g8wa_         152 RWDFVNGENAEVLITYDSSTNLLVASLVYPS--QKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETNDVLSWSFA  229 (233)
T ss_dssp             ECCCCTTCCEEEEEEEETTTTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECSSTTBCCCCEEEEEEEE
T ss_pred             cccccCCcEEEEEEEEeCCCcEEEEEEEeCC--CCCcEEEEEEechhHcCCCcEEEEEEEEcCCCCCCceeeEEEEEEEE
Confidence            3568899999999999999999999998865  5788999999999999999999999999995   4578999999999


Q ss_pred             cCC
Q 047282           82 SSL   84 (187)
Q Consensus        82 ~~~   84 (187)
                      +++
T Consensus       230 s~l  232 (233)
T d1g8wa_         230 SKL  232 (233)
T ss_dssp             EEE
T ss_pred             EEc
Confidence            864

>d1avba_ b.29.1.1 (A:) Phytohemagglutinin-L, PHA-L, also arcelin {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Phytohemagglutinin-L, PHA-L, also arcelin
species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]

Probab=99.72  E-value=2.3e-18  Score=138.64  Aligned_cols=78  Identities=23%  Similarity=0.406  Sum_probs=70.5

Q ss_pred             ccccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCC---Cccccceeeeeec
Q 047282            5 RSDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGV---DFTIFSIYLWEFN   81 (187)
Q Consensus         5 ~~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~---~~~~h~i~sW~F~   81 (187)
                      ...+.+|+.+.|||+||+.+++|+|+|.+..  +|..|.++..+||+.+|+++|||||||+||.   ..|.|+|++|+|+
T Consensus       145 ~~~~~~g~~~~v~I~Yd~~~~~L~V~l~~~~--~~~~~~~~~~vdL~~~l~~~~y~GFSAaTG~~s~~~~~H~IlsWsF~  222 (226)
T d1avba_         145 NFGHNNGEKAEVRITYDSPKNDLRVSLLYPS--SEEKCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHNVLSWSFS  222 (226)
T ss_dssp             CSGGGTTCEEEEEEEEEGGGTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECSSGGGCEEEEEEEEEEE
T ss_pred             ccccCCCeEEEEEEEEcCCCcEEEEEEEeCC--CCccEEEEEEecHHHccCCcEEEEEEEEcCCCCCCeeeeEEEEEEeE
Confidence            4567899999999999999999999999875  5888999999999999999999999999996   4578999999999


Q ss_pred             cCC
Q 047282           82 SSL   84 (187)
Q Consensus        82 ~~~   84 (187)
                      +++
T Consensus       223 s~~  225 (226)
T d1avba_         223 SNF  225 (226)
T ss_dssp             EEE
T ss_pred             Eec
Confidence            764

>d1dbna_ b.29.1.1 (A:) Legume lectin {Maackia amurensis, leukoagglutinin [TaxId: 37501]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Legume lectins
domain: Legume lectin
species: Maackia amurensis, leukoagglutinin [TaxId: 37501]

Probab=99.72  E-value=4.4e-18  Score=138.20  Aligned_cols=77  Identities=29%  Similarity=0.399  Sum_probs=69.4

Q ss_pred             cccCCCceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCC--ccccceeeeeeccC
Q 047282            6 SDVKSGRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVD--FTIFSIYLWEFNSS   83 (187)
Q Consensus         6 ~~l~~G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~--~~~h~i~sW~F~~~   83 (187)
                      ..+.+|+...|||+||+.++.|.|++.+..  +|..|.|+..+||+++|+++||||||||||..  .|.|+|++|+|+++
T Consensus       161 ~~~~~g~~~~~~i~y~~~~~~l~v~l~~~~--~~~~~~ls~~vdL~~~l~~~vyvGFSAsTG~~~~~~~H~I~sWsFss~  238 (239)
T d1dbna_         161 WDWINGGVAFATITYLAPNKTLIASLVYPS--NQTTFSVAASVDLKEILPEWVRVGFSAATGYPTEVETHDVLSWSFTST  238 (239)
T ss_dssp             CCCCTTCCEEEEEEEEGGGTEEEEEEEETT--TTEEEEEEEECCHHHHSCSEEEEEEEEEECSGGGCCCCEEEEEEEEEE
T ss_pred             ceEeCCceeEEEEEEcCCCCEEEEEEEecC--CCccEEEEEecchHHhcCCcEEEEEEEeCCCCCCcceeEEEEEEeEEe
Confidence            446789999999999999999999998865  57889999999999999999999999999964  57899999999976


Q ss_pred             C
Q 047282           84 L   84 (187)
Q Consensus        84 ~   84 (187)
                      +
T Consensus       239 l  239 (239)
T d1dbna_         239 L  239 (239)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1gv9a_ b.29.1.13 (A:) Carbohydrate-recognition domain of P58/ERGIC-53 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Carbohydrate-recognition domain of P58/ERGIC-53
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.83  E-value=4.1e-09  Score=83.02  Aligned_cols=68  Identities=18%  Similarity=0.064  Sum_probs=50.1

Q ss_pred             CceEEEEEEeeCCCceEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeeeeec
Q 047282           11 GRRNEAWISYNSSTHNLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFN   81 (187)
Q Consensus        11 G~~~~awI~Yd~~~~~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~F~   81 (187)
                      +..+++|++|+  .+.|+|++..........+.+...++ ...+++++|||||||||...+.|+|++|.|.
T Consensus       157 ~~~~~i~~~~~--~~~l~v~i~~~~~~~~~~~~~~~~~~-~~~l~~~~y~GFTAsTG~~~~~H~I~s~~~~  224 (228)
T d1gv9a_         157 PYPVRAKITYY--QKTLTVMINNGFTPDKNDYEFCAKVE-NMVIPTQGHFGISAATGGLADDHDVLSFLTF  224 (228)
T ss_dssp             SSCEEEEEEEE--TTEEEEEEECSSCCCTTCCEEEEEET-TCCCCSSBEEEEEEECCSSCCEEEEEEEEEE
T ss_pred             ceEEEEEEEec--CCEEEEEEeccccCCCcceeEEEEec-ccccCCCEEEEEEEeCCCCcCeEEEEEEEEE
Confidence            44456666665  58899999876543333344444444 6678999999999999999999999999874

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.06  E-value=1.6e-06  Score=70.27  Aligned_cols=50  Identities=18%  Similarity=0.318  Sum_probs=37.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..||||++..+..  .+...+....+.++|||
T Consensus        23 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~Hpn   74 (287)
T d1opja_          23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN   74 (287)
T ss_dssp             EETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTT
T ss_pred             eEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCC
Confidence            789999999999999988789999999865432  23334445555666666

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=2.4e-06  Score=68.53  Aligned_cols=49  Identities=18%  Similarity=0.296  Sum_probs=35.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n  165 (187)
                      +.||+|+||.||+|.+++ +..||||++.....  .....+...+..++|||
T Consensus        19 ~~iG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~Hpn   69 (272)
T d1qpca_          19 ERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQR   69 (272)
T ss_dssp             EEEEEETTEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTT
T ss_pred             EEEecCCCcEEEEEEECC-CCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCC
Confidence            789999999999999875 78899999965332  23344444555666665

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=2.7e-06  Score=67.78  Aligned_cols=49  Identities=14%  Similarity=0.243  Sum_probs=35.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|...+ +..||||++....  +.....+....+.++|||
T Consensus        11 ~~iG~G~fg~Vy~~~~~~-~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~Hpn   61 (263)
T d1sm2a_          11 QEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPK   61 (263)
T ss_dssp             EEEECCSSCCEEEEEETT-TEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTT
T ss_pred             EEEeeCCCeEEEEEEECC-CCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCC
Confidence            789999999999999875 6789999996533  233344445555666665

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=97.98  E-value=4.7e-06  Score=67.99  Aligned_cols=52  Identities=17%  Similarity=0.160  Sum_probs=41.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHh-CCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIR-NPTGP  167 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir-~~n~~  167 (187)
                      .+||+|+||.||+|+...++..||||++..........+...++.++ |+|-.
T Consensus        41 ~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~il~~l~~hpnIv   93 (328)
T d3bqca1          41 RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNII   93 (328)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHHHHHHTTSTTBC
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHhccCCCCCc
Confidence            78999999999999998889999999997655555555666667775 66643

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=3.3e-06  Score=67.39  Aligned_cols=52  Identities=17%  Similarity=0.005  Sum_probs=35.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      +.||+|+||.||+|+.++ +..||||.+...... ...+..++..+++-+|++-
T Consensus        10 ~~iG~G~fg~Vy~~~~~~-~~~vAvK~l~~~~~~-~~~~~~Ev~~~~~l~HpnI   61 (258)
T d1k2pa_          10 KELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKL   61 (258)
T ss_dssp             CCCCEETTEEEEEEEETT-TEEEEEEEEESSSSC-HHHHHHHHHHHHTCCCTTB
T ss_pred             EEEecCCCeEEEEEEECC-CCEEEEEEECcCcCC-HHHHHHHHHHHHhcCCCce
Confidence            789999999999999975 788999998754322 2234444444444444443

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=3.6e-06  Score=67.89  Aligned_cols=50  Identities=24%  Similarity=0.340  Sum_probs=33.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh--------hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK--------AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~--------~~~~~~~~~~~Ir~~n  165 (187)
                      ++||+|+||.||+|..+.++..+|||++......        ....+....+.++|||
T Consensus         4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpn   61 (299)
T d1ua2a_           4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPN   61 (299)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTT
T ss_pred             eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCC
Confidence            6799999999999999888999999998643221        2223444455566655

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=4.4e-06  Score=67.75  Aligned_cols=50  Identities=24%  Similarity=0.386  Sum_probs=37.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhH---HHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAV---ALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~---~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..+|+|.+........   ..+...++.++|||
T Consensus        18 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~Hpn   70 (288)
T d2jfla1          18 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN   70 (288)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTT
T ss_pred             EEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCC
Confidence            679999999999999988889999999966443333   33444455566655

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=5.9e-06  Score=67.27  Aligned_cols=50  Identities=22%  Similarity=0.218  Sum_probs=36.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhH---HHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAV---ALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~---~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..||+|.+........   ..+....+.++|||
T Consensus        26 ~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~Hpn   78 (293)
T d1yhwa1          26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN   78 (293)
T ss_dssp             EECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTT
T ss_pred             EEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCC
Confidence            789999999999999888899999999865433322   33333444555554

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=7.5e-06  Score=66.03  Aligned_cols=30  Identities=23%  Similarity=0.257  Sum_probs=27.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|..+.++..+|||.+..
T Consensus        16 ~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~   45 (293)
T d1jksa_          16 EELGSGQFAVVKKCREKSTGLQYAAKFIKK   45 (293)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEB
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEEh
Confidence            789999999999999988899999999864

>d2a6va1 b.29.1.13 (A:9-226) Emp46p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp46p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.86  E-value=2.1e-05  Score=61.52  Aligned_cols=68  Identities=13%  Similarity=0.071  Sum_probs=45.7

Q ss_pred             CCCceEEEEEEeeCCCc-eEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeeeeeccCC
Q 047282            9 KSGRRNEAWISYNSSTH-NLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLWEFNSSL   84 (187)
Q Consensus         9 ~~G~~~~awI~Yd~~~~-~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW~F~~~~   84 (187)
                      .++...++.|.|+..+. .|+|.+.  +    ....-...++|  ..++++|+||||+||...+.|+|++|++...+
T Consensus       148 ~~~~~~~~~i~Y~~~~~~~l~v~id--~----~~c~~t~~i~l--p~~~~~yfG~SA~Tg~~~d~~dIls~~~~~~~  216 (218)
T d2a6va1         148 DSMVPSTLRLTYNPLDNHLLKLQMD--N----RVCFQTRKVKF--MGSSPFRIGTSAINDASKESFEILKMKLYDGV  216 (218)
T ss_dssp             SCSSCEEEEEEEEGGGTSEEEEEET--T----EEEEEESCCCG--GGTSCBEEEEEEECCTTCCEEEEEEEEEESSC
T ss_pred             CCCCcEEEEEEEECcccceEEEEeC--C----cEEEEECCeec--CCCCcEEEEEEECCCCCcCcEEEEEEEEEecc
Confidence            34667788888886553 4566552  1    11111122333  34577999999999999999999999997654

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=4.6e-06  Score=68.98  Aligned_cols=50  Identities=16%  Similarity=0.143  Sum_probs=38.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~  166 (187)
                      ++||+|+||.||+|+...++..||||++...... ...+...+++++|+|.
T Consensus        26 k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-~~~Ei~il~~l~h~ni   75 (350)
T d1q5ka_          26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-KNRELQIMRKLDHCNI   75 (350)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS-CCHHHHHHHHCCCTTB
T ss_pred             eEEeeCcCeEEEEEEECCCCCEEEEEEECccchH-HHHHHHHHHhcCCCCC
Confidence            7799999999999999888999999999654332 2235556677777764

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=9e-06  Score=65.85  Aligned_cols=51  Identities=22%  Similarity=0.222  Sum_probs=36.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-----hhHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-----KAVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-----~~~~~~~~~~~~Ir~~n~  166 (187)
                      +.||+|+||.||+|+...++..||||++.....     .....+...++.++|+|.
T Consensus        16 ~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~ni   71 (318)
T d3blha1          16 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV   71 (318)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTB
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCc
Confidence            789999999999999987799999999854321     223344555667777664

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=1e-05  Score=65.51  Aligned_cols=49  Identities=22%  Similarity=0.222  Sum_probs=35.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|..+. +..||||.+.....  .....+....+.++|+|
T Consensus        23 ~~iG~G~fg~Vy~~~~~~-~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~n   73 (285)
T d1fmka3          23 VKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEK   73 (285)
T ss_dssp             EEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTT
T ss_pred             eEEeeCCCeEEEEEEECC-CCEEEEEEECcccCCHHHHHHHHHHHHhcccCC
Confidence            789999999999999976 57799999965332  23344444455566665

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=1.4e-05  Score=63.99  Aligned_cols=56  Identities=20%  Similarity=0.122  Sum_probs=39.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPTGPYGGE  171 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n~~~~~~  171 (187)
                      ..||+|+||.||+|....++..||+|.+....  ......+..|++-+++-+|+|--.
T Consensus        15 ~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~   72 (270)
T d1t4ha_          15 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVR   72 (270)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeee
Confidence            57999999999999998888899999986532  223333445555555555555443

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=8e-06  Score=65.93  Aligned_cols=53  Identities=17%  Similarity=0.190  Sum_probs=34.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--hhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      +.||+|+||.||+|....++..+|+|.+.....  ........|++-+++-+|++
T Consensus         8 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~   62 (298)
T d1gz8a_           8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN   62 (298)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTT
T ss_pred             cEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCc
Confidence            689999999999999988889999999854321  11223333444444444444

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=7.2e-06  Score=65.95  Aligned_cols=53  Identities=19%  Similarity=0.110  Sum_probs=34.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh-hHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK-AVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~-~~~~~~~~~~~Ir~~n~~~  168 (187)
                      +.||+|+||.||+|+.+.++..+|+|.+...... .......|++-++.-+|+|
T Consensus        11 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~Hpn   64 (271)
T d1nvra_          11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN   64 (271)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTT
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCC
Confidence            7899999999999999888999999998653321 1222333444444444444

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=1.4e-05  Score=64.02  Aligned_cols=55  Identities=11%  Similarity=0.073  Sum_probs=39.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPTGPYGG  170 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n~~~~~  170 (187)
                      +.||+|+||.||+|+.+.++..+|+|.+....  +.....+..|++-+++-+|++.-
T Consensus        10 ~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv   66 (269)
T d2java1          10 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV   66 (269)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBC
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEe
Confidence            78999999999999998888999999986532  22333344555555555555543

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=9.3e-06  Score=66.94  Aligned_cols=51  Identities=10%  Similarity=0.071  Sum_probs=35.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh----hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK----AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~----~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|+...++..+|||++......    ....+...++.++|+|.
T Consensus        14 ~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~i   68 (345)
T d1pmea_          14 SYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI   68 (345)
T ss_dssp             EECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             EEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCC
Confidence            7899999999999998878999999999653221    22344556667777764

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=1.9e-05  Score=62.71  Aligned_cols=53  Identities=21%  Similarity=0.187  Sum_probs=37.3

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhhHHHHHHHHHHHhCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKAVALCKGLFRDIRNPTGPY  168 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~~~~~~~~~~~Ir~~n~~~  168 (187)
                      ..||+|+||.||+|+...++..||||.+....  .........|+.-+++-+|++
T Consensus         8 ~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~n   62 (292)
T d1unla_           8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN   62 (292)
T ss_dssp             EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTT
T ss_pred             eEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCC
Confidence            68999999999999998888999999985432  222333444555555555554

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.79  E-value=1e-05  Score=65.49  Aligned_cols=51  Identities=16%  Similarity=0.196  Sum_probs=34.2

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeecccchh----hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQLKHGK----AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~~~~~----~~~~~~~~~~~Ir~~n~  166 (187)
                      +.||+|+||.||+|+.++     ++..||||++......    ....+...+..++|+|.
T Consensus        19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~ni   78 (301)
T d1lufa_          19 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI   78 (301)
T ss_dssp             EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTB
T ss_pred             EEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCc
Confidence            789999999999999753     3568999999653322    22333344445555553

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=1.8e-05  Score=63.49  Aligned_cols=54  Identities=19%  Similarity=0.105  Sum_probs=33.7

Q ss_pred             cEEcccCCceEEEEEEcCCC----eeeeeeeecccch-hhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETN----SFFSNWNVQLKHG-KAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~----~~vavK~i~~~~~-~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      ++||+|+||.||+|..+.++    ..||||++..... .....+..+++.+++-+|++.
T Consensus        13 ~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nI   71 (283)
T d1mqba_          13 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI   71 (283)
T ss_dssp             EEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTB
T ss_pred             eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCE
Confidence            78999999999999987543    3699999865322 222233344444444444443

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=97.79  E-value=1.2e-05  Score=66.85  Aligned_cols=50  Identities=28%  Similarity=0.296  Sum_probs=37.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhH---HHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAV---ALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~---~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..+|||.+........   ..+...++.++|||
T Consensus        32 ~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~Hpn   84 (350)
T d1koaa2          32 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT   84 (350)
T ss_dssp             EEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTT
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCC
Confidence            789999999999999988899999999966443332   23344455666665

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=8.7e-06  Score=65.06  Aligned_cols=48  Identities=19%  Similarity=0.258  Sum_probs=32.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh-hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK-AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~-~~~~~~~~~~~Ir~~n  165 (187)
                      +.||+|+||.||+|...  +..||||++..+... ....+....+.++|||
T Consensus        13 ~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~~~~~~~~~E~~~l~~l~Hpn   61 (262)
T d1byga_          13 QTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSN   61 (262)
T ss_dssp             EEEEECSSCEEEEEEET--TEEEEEEECCCCC--HHHHHTHHHHTTCCCTT
T ss_pred             EEEecCCCeEEEEEEEC--CeEEEEEEECcHHHHHHHHHHHHHHHhCCCCC
Confidence            78999999999999985  678999999654322 2333333444455544

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=1.4e-05  Score=65.58  Aligned_cols=50  Identities=20%  Similarity=0.231  Sum_probs=37.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh--hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK--AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~--~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..+|+|.+......  ....+....+.++|||
T Consensus        11 ~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~Hpn   62 (321)
T d1tkia_          11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRN   62 (321)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTT
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCC
Confidence            7899999999999999888999999999764332  2223334455666665

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.76  E-value=2.2e-05  Score=62.47  Aligned_cols=57  Identities=11%  Similarity=-0.080  Sum_probs=41.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc---hhhHHHHHHHHHHHhCCCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH---GKAVALCKGLFRDIRNPTGPYGGEA  172 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~---~~~~~~~~~~~~~Ir~~n~~~~~~~  172 (187)
                      ..||+|+||.||+|....++..+|||.+....   ......+..|++.+++.+|++--..
T Consensus        13 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~   72 (277)
T d1o6ya_          13 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV   72 (277)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcc
Confidence            78999999999999998889999999996532   2223344556666666666665443

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.76  E-value=2.2e-05  Score=64.19  Aligned_cols=54  Identities=13%  Similarity=0.071  Sum_probs=37.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch---hhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG---KAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~---~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      +.||+|+||.||+|+...++..||||.+.....   .....+..|++-+++-+|+|-
T Consensus        21 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnI   77 (309)
T d1u5ra_          21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT   77 (309)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTB
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCE
Confidence            789999999999999988899999999865432   222233444444444444443

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=1.3e-05  Score=63.97  Aligned_cols=30  Identities=20%  Similarity=0.217  Sum_probs=27.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||+|+.+.++..+|+|.+..
T Consensus        12 ~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~   41 (263)
T d2j4za1          12 RPLGKGKFGNVYLAREKQSKFILALKVLFK   41 (263)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEH
T ss_pred             EEEecCCCcEEEEEEECCCCcEEEEEEEch
Confidence            789999999999999988889999999864

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.7e-05  Score=64.18  Aligned_cols=30  Identities=20%  Similarity=0.123  Sum_probs=27.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....++..+|||.+..
T Consensus        14 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~   43 (288)
T d1uu3a_          14 KILGEGSFSTVVLARELATSREYAIKILEK   43 (288)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEH
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEeh
Confidence            789999999999999988889999999864

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.5e-05  Score=64.95  Aligned_cols=50  Identities=22%  Similarity=0.255  Sum_probs=31.2

Q ss_pred             cEEcccCCceEEEEEEcCCCe----eeeeeeecccc-h---hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNS----FFSNWNVQLKH-G---KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~----~vavK~i~~~~-~---~~~~~~~~~~~~Ir~~n  165 (187)
                      ++||+|+||.||+|....++.    .||+|++.... .   .....+......++|||
T Consensus        15 ~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~Hpn   72 (317)
T d1xkka_          15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH   72 (317)
T ss_dssp             EEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTT
T ss_pred             eEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCC
Confidence            789999999999999876554    58888885422 2   22333444455566655

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=97.73  E-value=2e-05  Score=65.55  Aligned_cols=54  Identities=19%  Similarity=0.150  Sum_probs=38.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      ..||+|+||.||+|....++..+|||.+.............|++-+++-+|+|.
T Consensus        35 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnI   88 (352)
T d1koba_          35 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL   88 (352)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTB
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCC
Confidence            789999999999999988899999999976443333333445554555455443

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.72  E-value=9.2e-06  Score=66.34  Aligned_cols=31  Identities=23%  Similarity=0.199  Sum_probs=27.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|....++..+|||.+...
T Consensus        15 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~   45 (307)
T d1a06a_          15 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKK   45 (307)
T ss_dssp             EESBSGGGGGEEEEEETTTCCEEEEEEEEC-
T ss_pred             EEEeeccCeEEEEEEECCCCCEEEEEEEchH
Confidence            7899999999999999888899999998653

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1.5e-05  Score=65.83  Aligned_cols=50  Identities=10%  Similarity=0.009  Sum_probs=34.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhh---HHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKA---VALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~---~~~~~~~~~~Ir~~n  165 (187)
                      ++||+|+||.||+|....++..+|||++....  ...   ...+....+.++|||
T Consensus        23 ~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpn   77 (355)
T d2b1pa1          23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN   77 (355)
T ss_dssp             EECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTT
T ss_pred             EEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCC
Confidence            78999999999999998889999999996432  222   223334445666665

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=2.1e-05  Score=64.32  Aligned_cols=54  Identities=17%  Similarity=0.109  Sum_probs=38.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh-hHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK-AVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~-~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      ..||+|+||.||+|....++..+|+|.+...... .......|++-+++-+|+|.
T Consensus        12 ~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnI   66 (322)
T d1s9ja_          12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI   66 (322)
T ss_dssp             EEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTB
T ss_pred             EEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCC
Confidence            6899999999999999888999999998654322 22333445555555555554

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=1.7e-05  Score=64.81  Aligned_cols=51  Identities=14%  Similarity=0.152  Sum_probs=36.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch--h---hHHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG--K---AVALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~--~---~~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|+...++..||||++.....  .   ....+...++.++|+|.
T Consensus        24 ~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~i   79 (348)
T d2gfsa1          24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV   79 (348)
T ss_dssp             EECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCe
Confidence            789999999999999888899999999965321  1   22233444556666654

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.70  E-value=2.1e-05  Score=63.09  Aligned_cols=50  Identities=14%  Similarity=0.179  Sum_probs=37.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch-hhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG-KAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~-~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|....++..||||.+..... .....+....+.++|+|
T Consensus        13 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~~   63 (299)
T d1ckia_          13 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGV   63 (299)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTST
T ss_pred             EEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHccCCC
Confidence            789999999999999988899999998765332 33444555666776655

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=2.3e-05  Score=63.92  Aligned_cols=59  Identities=17%  Similarity=0.092  Sum_probs=38.8

Q ss_pred             cEEcccCCceEEEEEEcCCC---eeeeeeeeccc-chhhHHHHHHHHHHHhCCCCCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETN---SFFSNWNVQLK-HGKAVALCKGLFRDIRNPTGPYGGEATG  174 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~---~~vavK~i~~~-~~~~~~~~~~~~~~Ir~~n~~~~~~~~~  174 (187)
                      ++||+|+||.||+|.+..++   ..||||++... .......+..+++.+++-+|++-....|
T Consensus        33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g   95 (311)
T d1r0pa_          33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLG   95 (311)
T ss_dssp             EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCE
T ss_pred             eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeE
Confidence            68999999999999986532   36899998642 3334444555666555555555554444

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=2e-05  Score=63.92  Aligned_cols=51  Identities=14%  Similarity=0.072  Sum_probs=34.0

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      ..||+|+||.||+|+..  +..||||++....... ..++.++..+..-+|++-
T Consensus         9 ~~iG~G~fg~Vy~~~~~--g~~vAvK~~~~~~~~~-~~~e~ei~~~~~~~HpnI   59 (303)
T d1vjya_           9 ESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERS-WFREAEIYQTVMLRHENI   59 (303)
T ss_dssp             EEEECCSSSEEEEEEET--TEEEEEEEECGGGHHH-HHHHHHHHTSTTCCCTTB
T ss_pred             EEEeeCCCeEEEEEEEC--CEEEEEEEECccchhH-HHHHHHHHHHhhCCCCcC
Confidence            78999999999999974  6899999996543322 223344444433344443

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.69  E-value=2e-05  Score=64.44  Aligned_cols=50  Identities=20%  Similarity=0.051  Sum_probs=37.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchh--hHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGK--AVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~--~~~~~~~~~~~Ir~~n  165 (187)
                      .+||+|+||.||+|+...++..||||++..+...  ....+...+++++|++
T Consensus        19 ~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~   70 (362)
T d1q8ya_          19 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDAD   70 (362)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchh
Confidence            7899999999999999888999999999764322  2233444556676654

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=1.9e-05  Score=63.80  Aligned_cols=49  Identities=22%  Similarity=0.275  Sum_probs=31.5

Q ss_pred             EEcccCCceEEEEEEcC--CCeeeeeeeecccchh-hHHHHHHH---HHHHhCCC
Q 047282          117 KLGQGGFGGVDKGFLRE--TNSFFSNWNVQLKHGK-AVALCKGL---FRDIRNPT  165 (187)
Q Consensus       117 ~iG~G~fG~Vykg~l~~--~~~~vavK~i~~~~~~-~~~~~~~~---~~~Ir~~n  165 (187)
                      .||+|+||.||+|..+.  ++..||||.+...... ....+..|   +..++|||
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~Hpn   70 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPY   70 (285)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTT
T ss_pred             EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCC
Confidence            49999999999998753  3557999998653322 22333334   44555554

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=97.66  E-value=2.4e-05  Score=62.37  Aligned_cols=30  Identities=27%  Similarity=0.382  Sum_probs=26.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      +.||+|+||.||+|..+. +..+|||++...
T Consensus         8 ~~iG~G~fg~Vy~~~~~~-~~~vAvK~i~~~   37 (286)
T d1ob3a_           8 EKIGEGTYGVVYKAQNNY-GETFALKKIRLE   37 (286)
T ss_dssp             EEEEEETTEEEEEEEETT-SCEEEEEEECCS
T ss_pred             cEEecCCCcEEEEEEeCC-CCEEEEEEEehh
Confidence            679999999999999875 789999998553

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.65  E-value=3.4e-05  Score=64.39  Aligned_cols=55  Identities=16%  Similarity=0.163  Sum_probs=39.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccch------hhHHHHHHHHHHHhCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHG------KAVALCKGLFRDIRNPTGPYGG  170 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~------~~~~~~~~~~~~Ir~~n~~~~~  170 (187)
                      ++||+|+||.||+|+...++..+|+|.+.....      .....+..+++.+++.+|+|.-
T Consensus        10 ~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv   70 (364)
T d1omwa3          10 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV   70 (364)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBC
T ss_pred             eEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEE
Confidence            789999999999999988899999999864321      1222334445567766666643

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=97.62  E-value=3.5e-05  Score=62.00  Aligned_cols=50  Identities=14%  Similarity=0.092  Sum_probs=38.2

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc-hhhHHHHHHHHHHHhCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH-GKAVALCKGLFRDIRNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n  165 (187)
                      ..||+|+||.||+|+...++..+|||.+.... ......+..+++.++|.+
T Consensus        11 ~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~   61 (293)
T d1csna_          11 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCT   61 (293)
T ss_dssp             EEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCT
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCCC
Confidence            78999999999999998889999999885533 233445566677777743

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.58  E-value=5.4e-05  Score=61.27  Aligned_cols=55  Identities=18%  Similarity=0.111  Sum_probs=35.5

Q ss_pred             cEEcccCCceEEEEEEcCCCe---eeeeeeeccc-chhhHHHHHHHHHHHhCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNS---FFSNWNVQLK-HGKAVALCKGLFRDIRNPTGPYGG  170 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~---~vavK~i~~~-~~~~~~~~~~~~~~Ir~~n~~~~~  170 (187)
                      ++||+|+||.||+|..+.++.   .+|||++... .......+..|++-+++-+|+|--
T Consensus        32 ~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv   90 (299)
T d1jpaa_          32 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI   90 (299)
T ss_dssp             EEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBC
T ss_pred             eEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCc
Confidence            889999999999999865443   5899988653 233334455555555555555543

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=5.5e-05  Score=60.56  Aligned_cols=55  Identities=18%  Similarity=0.192  Sum_probs=33.1

Q ss_pred             cEEcccCCceEEEEEEcC--CCeeeeeeeecccch--hhHHHHHHHHHHHhCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE--TNSFFSNWNVQLKHG--KAVALCKGLFRDIRNPTGPYGG  170 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~--~~~~vavK~i~~~~~--~~~~~~~~~~~~Ir~~n~~~~~  170 (187)
                      ++||+|+||.||+|....  ++..||||.+.....  .....+..|++-+++-+|+|.-
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv   71 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV   71 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBC
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCc
Confidence            469999999999998753  346799999854321  2223344444444444444443

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.56  E-value=4.1e-05  Score=62.56  Aligned_cols=30  Identities=23%  Similarity=0.353  Sum_probs=27.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|+.+.++..+|||.+..
T Consensus        10 ~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~   39 (316)
T d1fota_          10 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKK   39 (316)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEH
T ss_pred             EEEecCcCcEEEEEEECCCCCEEEEEEEch
Confidence            689999999999999988899999999864

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=5.5e-05  Score=61.91  Aligned_cols=30  Identities=33%  Similarity=0.496  Sum_probs=27.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||+|+.+.++..+|||.+.+
T Consensus         8 ~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k   37 (320)
T d1xjda_           8 KMLGKGSFGKVFLAEFKKTNQFFAIKALKK   37 (320)
T ss_dssp             EEEEECSSSEEEEEEETTTTEEEEEEEEEH
T ss_pred             eEEecCCCcEEEEEEECCCCCEEEEEEEch
Confidence            789999999999999988899999999964

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.54  E-value=5.7e-05  Score=60.59  Aligned_cols=30  Identities=17%  Similarity=0.139  Sum_probs=27.5

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      +.||+|+||.||+|+...++..+|||.+..
T Consensus         9 ~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~   38 (277)
T d1phka_           9 EILGRGVSSVVRRCIHKPTCKEYAVKIIDV   38 (277)
T ss_dssp             EEEEECSSEEEEEEEETTTTEEEEEEEEET
T ss_pred             eEEecCcCeEEEEEEECCCCCEEEEEEEec
Confidence            789999999999999988899999999865

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=3.7e-05  Score=62.97  Aligned_cols=51  Identities=14%  Similarity=0.099  Sum_probs=30.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc--hhh---HHHHHHHHHHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH--GKA---VALCKGLFRDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~--~~~---~~~~~~~~~~Ir~~n~  166 (187)
                      ..||+|+||.||+|....++..+|||++....  +..   ...+...++.++|+|.
T Consensus        24 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpni   79 (346)
T d1cm8a_          24 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV   79 (346)
T ss_dssp             EEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTB
T ss_pred             EEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCe
Confidence            67899999999999998889999999996432  222   2233344455666653

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.51  E-value=5.8e-05  Score=62.58  Aligned_cols=54  Identities=19%  Similarity=0.166  Sum_probs=36.7

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccc---hhhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKH---GKAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~---~~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      ..||+|+||.||+|+.+.++..+|||.+....   .........+++-++.-+|+|-
T Consensus        47 ~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnI  103 (350)
T d1rdqe_          47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL  103 (350)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTB
T ss_pred             EEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcE
Confidence            78999999999999998889999999986432   1122233344444444444443

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=4.5e-05  Score=61.83  Aligned_cols=54  Identities=17%  Similarity=0.075  Sum_probs=35.7

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeecccc-hhhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      ..||+|+||.||+|....     .+..||||++.... ......+..+++-+++-+|++-
T Consensus        26 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nI   85 (308)
T d1p4oa_          26 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV   85 (308)
T ss_dssp             EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTB
T ss_pred             eEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCE
Confidence            789999999999998742     24689999996532 2333334455555555555543

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=3.4e-05  Score=62.52  Aligned_cols=30  Identities=20%  Similarity=0.253  Sum_probs=25.1

Q ss_pred             cEEcccCCceEEEEEEcCCCe--eeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNS--FFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~--~vavK~i~~  145 (187)
                      ++||+|+||.||+|+...++.  .||||++..
T Consensus        16 ~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~   47 (309)
T d1fvra_          16 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE   47 (309)
T ss_dssp             EEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred             EEEeeCCCcEEEEEEECCCCeEEEEEEEEECc
Confidence            789999999999999987665  478888754

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=6e-05  Score=62.27  Aligned_cols=31  Identities=23%  Similarity=0.278  Sum_probs=28.1

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~  146 (187)
                      +.||+|+||.||+++.+.++..+|+|.+.+.
T Consensus        11 ~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~   41 (337)
T d1o6la_          11 KLLGKGTFGKVILVREKATGRYYAMKILRKE   41 (337)
T ss_dssp             EEEEECSSEEEEEEEETTTCCEEEEEEEEHH
T ss_pred             EEEecCcCeEEEEEEECCCCCEEEEEEEchh
Confidence            6899999999999999888999999999653

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=3.7e-05  Score=61.28  Aligned_cols=30  Identities=33%  Similarity=0.397  Sum_probs=27.4

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~  145 (187)
                      .+||+|+||.||+|+...++..||||.+..
T Consensus        10 ~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~   39 (273)
T d1xwsa_          10 PLLGSGGFGSVYSGIRVSDNLPVAIKHVEK   39 (273)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEEEEEG
T ss_pred             EEEeeCCCeEEEEEEECCCCCEEEEEEEeh
Confidence            789999999999999988889999999864

>d2a6za1 b.29.1.13 (A:7-227) Emp47p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: Concanavalin A-like lectins/glucanases
superfamily: Concanavalin A-like lectins/glucanases
family: Lectin leg-like
domain: Emp47p N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.48  E-value=0.00012  Score=56.96  Aligned_cols=61  Identities=11%  Similarity=0.069  Sum_probs=41.0

Q ss_pred             CCCceEEEEEEeeCCCc-eEEEEEEeCCCCCcccceeEEEecCCccCCceeEEEEEeecCCCccccceeee
Q 047282            9 KSGRRNEAWISYNSSTH-NLSVAFTGFRNNSVVMQGLDYQVDLRQHLPEFVTFGFSMETGVDFTIFSIYLW   78 (187)
Q Consensus         9 ~~G~~~~awI~Yd~~~~-~L~V~ls~~~~~~p~~p~ls~~vdLs~~L~~~v~VGFSasTG~~~~~h~i~sW   78 (187)
                      .++...+++|+|+..++ .|.|.+..       +.++  .++--.+.+++.|+||||+||...+.|+++.+
T Consensus       151 ~~~~~~~~~I~y~~~~~~~l~v~id~-------~~c~--~~~~v~lp~~~~~fG~SA~TG~~~~~hd~~~i  212 (221)
T d2a6za1         151 DSSVPSTIRVTYDLEDDNLLKVQVDN-------KVCF--QTRKVRFPSGSYRIGVTAQNGAVNNNAESFEI  212 (221)
T ss_dssp             TEEEEEEEEEEEEGGGTSEEEEEETT-------EEEE--EESCCCCCSSEEEEEEEEECCSGGGCCCEEEE
T ss_pred             CCCCCEEEEEEEecCccceEEEEecC-------cEeE--EECCeecCCCCEEEEEEEccCCccCCCceEEE
Confidence            35666799999997654 47776631       1122  22322233567899999999999999987665

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=7.8e-05  Score=61.35  Aligned_cols=49  Identities=24%  Similarity=0.076  Sum_probs=34.6

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeecccchhhHHHHHHHH-HHHhCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLKHGKAVALCKGLF-RDIRNPTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~~~~~~~~~~~~~-~~Ir~~n~  166 (187)
                      .+||+|+||.||+|....++..+|||.+....  ....+.... +.++|||.
T Consensus        18 ~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~--~~~~E~~~~~~~~~hpnI   67 (335)
T d2ozaa1          18 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--KARREVELHWRASQCPHI   67 (335)
T ss_dssp             EEEEECSSCEEEEEEETTTCCEEEEEEEECSH--HHHHHHHHHHHHTTSTTB
T ss_pred             EEeeeccCeEEEEEEECCCCCEEEEEEECCcH--HHHHHHHHHHHhcCCCCC
Confidence            56999999999999998888999999986432  222233332 34467763

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=0.00011  Score=59.47  Aligned_cols=31  Identities=19%  Similarity=0.215  Sum_probs=25.7

Q ss_pred             cEEcccCCceEEEEEEc-----CCCeeeeeeeeccc
Q 047282          116 GKLGQGGFGGVDKGFLR-----ETNSFFSNWNVQLK  146 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~-----~~~~~vavK~i~~~  146 (187)
                      ..||+|+||.||+|+..     .++..||||++...
T Consensus        29 ~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~   64 (311)
T d1t46a_          29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS   64 (311)
T ss_dssp             EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT
T ss_pred             eEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcc
Confidence            88999999999999863     24568999999653

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=0.00011  Score=58.63  Aligned_cols=54  Identities=17%  Similarity=0.100  Sum_probs=35.8

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeeccc--chhhHHHHHHHHHHHhCCCCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQLK--HGKAVALCKGLFRDIRNPTGPYGGEA  172 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~~~--~~~~~~~~~~~~~~Ir~~n~~~~~~~  172 (187)
                      +.||+|+||.||+|+...   .||||.+...  .......+..+++.+++-+|+|.-..
T Consensus        14 ~~lG~G~fg~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~   69 (276)
T d1uwha_          14 QRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF   69 (276)
T ss_dssp             SEEEECSSCEEEEEESSS---EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             EEEeeCCCcEEEEEEECC---EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeee
Confidence            789999999999998643   5999998543  23333444455555555555554433

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=0.00013  Score=58.25  Aligned_cols=30  Identities=23%  Similarity=0.365  Sum_probs=25.2

Q ss_pred             cEEcccCCceEEEEEEcC-CCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRE-TNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|.... ++..||||.+..
T Consensus        13 ~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~   43 (305)
T d1blxa_          13 AEIGEGAYGKVFKARDLKNGGRFVALKRVRV   43 (305)
T ss_dssp             EEEEEETTEEEEEEEETTTTTEEEEEEEEEE
T ss_pred             EEEecccCeEEEEEEEECCCCEEEEEEEEeh
Confidence            689999999999999754 367799999854

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=0.00016  Score=58.97  Aligned_cols=50  Identities=16%  Similarity=0.141  Sum_probs=32.6

Q ss_pred             cEEcccCCceEEEEEEcCCC-----eeeeeeeecccch----hhHHHHHHHHHHH-hCCC
Q 047282          116 GKLGQGGFGGVDKGFLRETN-----SFFSNWNVQLKHG----KAVALCKGLFRDI-RNPT  165 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~-----~~vavK~i~~~~~----~~~~~~~~~~~~I-r~~n  165 (187)
                      .+||+|+||.||+|+....+     ..||+|.+.....    .....+...+..+ +|||
T Consensus        43 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~Hpn  102 (325)
T d1rjba_          43 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN  102 (325)
T ss_dssp             EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTT
T ss_pred             eEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCc
Confidence            88999999999999986433     3689998854322    2233344445556 6666

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=0.00022  Score=56.38  Aligned_cols=54  Identities=15%  Similarity=0.081  Sum_probs=34.7

Q ss_pred             cEEcccCCceEEEEEEcCC---Ceeeeeeeecccc-hhhHHHHHHHHHHHhCCCCCCC
Q 047282          116 GKLGQGGFGGVDKGFLRET---NSFFSNWNVQLKH-GKAVALCKGLFRDIRNPTGPYG  169 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~---~~~vavK~i~~~~-~~~~~~~~~~~~~Ir~~n~~~~  169 (187)
                      ..||+|+||.||+|....+   +..+|||.+.... ......+..+++.+++-+|++.
T Consensus        13 ~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnI   70 (273)
T d1mp8a_          13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI   70 (273)
T ss_dssp             EEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTB
T ss_pred             EEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCE
Confidence            7899999999999987542   3568999885432 2223334445554555455543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.00016  Score=57.67  Aligned_cols=30  Identities=27%  Similarity=0.337  Sum_probs=17.9

Q ss_pred             cEEcccCCceEEEEEEcCC---Ceeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRET---NSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~---~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|+....   ...||||.+..
T Consensus        14 ~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~   46 (273)
T d1u46a_          14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKP   46 (273)
T ss_dssp             EECC----CCCEEEEEECTTSCEEEEEEEC---
T ss_pred             EEEecCCCeEEEEEEEECCCCcEEEEEEEEECh
Confidence            6799999999999986432   23689999865

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.00018  Score=57.78  Aligned_cols=32  Identities=19%  Similarity=0.150  Sum_probs=20.3

Q ss_pred             cEEcccCCceEEEEEEcCCC-------eeeeeeeecccc
Q 047282          116 GKLGQGGFGGVDKGFLRETN-------SFFSNWNVQLKH  147 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~-------~~vavK~i~~~~  147 (187)
                      ..||+|+||.||+|+....+       ..||||++..+.
T Consensus        19 ~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~   57 (299)
T d1fgka_          19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA   57 (299)
T ss_dssp             EECC-----CEEEEEEECC----CCCEEEEEEECCCTTC
T ss_pred             eEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc
Confidence            78999999999999875432       479999996543

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=0.00017  Score=58.84  Aligned_cols=51  Identities=18%  Similarity=0.210  Sum_probs=37.4

Q ss_pred             cEEcccCCceEEEEEE---cCCCeeeeeeeecccc-------hhhHHHHHHHHHHHhC-CCC
Q 047282          116 GKLGQGGFGGVDKGFL---RETNSFFSNWNVQLKH-------GKAVALCKGLFRDIRN-PTG  166 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l---~~~~~~vavK~i~~~~-------~~~~~~~~~~~~~Ir~-~n~  166 (187)
                      ..||+|+||.||+|+.   +.++..+|||.+....       ......+....++++| +|-
T Consensus        30 ~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnI   91 (322)
T d1vzoa_          30 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL   91 (322)
T ss_dssp             EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTB
T ss_pred             EEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeE
Confidence            7899999999999986   3457899999885421       1234456677788887 443

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.00052  Score=54.69  Aligned_cols=30  Identities=23%  Similarity=0.155  Sum_probs=23.8

Q ss_pred             cEEcccCCceEEEEEEcC-----CCeeeeeeeecc
Q 047282          116 GKLGQGGFGGVDKGFLRE-----TNSFFSNWNVQL  145 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~-----~~~~vavK~i~~  145 (187)
                      ..||+|+||.||+|....     ++..||||++..
T Consensus        19 ~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~   53 (299)
T d1ywna1          19 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE   53 (299)
T ss_dssp             EEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC--
T ss_pred             eEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcc
Confidence            889999999999999753     235799999864

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.84  E-value=0.00037  Score=52.08  Aligned_cols=28  Identities=11%  Similarity=-0.057  Sum_probs=24.9

Q ss_pred             cEEcccCCceEEEEEEcCCCeeeeeeeec
Q 047282          116 GKLGQGGFGGVDKGFLRETNSFFSNWNVQ  144 (187)
Q Consensus       116 ~~iG~G~fG~Vykg~l~~~~~~vavK~i~  144 (187)
                      ++||+|+||.||+|...+ +..+|||.+.
T Consensus         6 ~~IG~G~~g~Vy~a~~~~-g~~vAvKi~r   33 (191)
T d1zara2           6 KLMGEGKESAVFNCYSEK-FGECVVKFHK   33 (191)
T ss_dssp             EEEEECSSEEEEEEEETT-TEEEEEEEEC
T ss_pred             CEeeeCcceEEEEEECCC-CCEEEEEEEe
Confidence            789999999999999865 8899999753