Citrus Sinensis ID: 047368

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-----
MDPEVGNGCVQEDEELGWGKSLPVPSVQEIVRNDSLCVPERYIQERQNRPDYHSEVSYASSEIPVINMSLLANGDKDELRNFDIACKEWGFFQITNHGIAETVIHNMKEAIAAFFQLPFDEKKKYTMPANDVQGYGQGYVVSEQQKLDWSDVLFLVTLPPSVRNLKLWPVALPGFKESIDQYSTEIRKVTEEIFAKLSLLMGMDTDGLKMLHGEMKQATRMNYYPTCSRPELVLGVSPHSDASTITLLLQDDKITGLQIKHKDSWIPVKPIPDAIVVNIGDVAEVLSNGLYKSVEHRAVTNEKKARMSVATFVIPSEEVEIGPLESMVDDKQFPRMYRNMKYVDYLRHTLERKMDGKAHTEYLKL
cccccccccccHHHHcccccccccccHHHHHHccccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHcccccccEEEccccccccccccccEEEEEcEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccEEEEccccccccccccccccccccccEEEEEEccccccEEEEEccEEEEcccccccEEEEEccEEEEEEcccccccccEEEccccccEEEEEEEEccccccEEEcccccccccccccccccccHHHHHHHHHHcccccccccccccc
cccHHHccccHcccccccccccccHHHHHHHHcccccccHHcEcccccccccccccccccccccEEEHHHcccccHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHccccccEEEEEEEEEEccccccHHHHEEEEEccHHHccccHcccccHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEccccccccccEcccccccccccEEEEEEccccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEEcccccEEcccHHHccccccccccccccHHHHHHHHHHcccccccHHHHccc
mdpevgngcvqedeelgwgkslpvpsvqeivrndslcvperyiqerqnrpdyhsevsyasseipvinmsllangdkdelrNFDIACKewgffqitnhGIAETVIHNMKEAIAAFFQlpfdekkkytmpandvqgygqgyvvseqqkldwsdvlflvtlppsvrnlklwpvalpgfkeSIDQYSTEIRKVTEEIFAKLSLLMGMDTDGLKMLHGemkqatrmnyyptcsrpelvlgvsphsdaSTITLLLQddkitglqikhkdswipvkpipdaiVVNIGDVAEVLSNGLYKSVEHRAVTNEKKARMSVATfvipseeveigplesmvddkqfprmyrnMKYVDYLRHTLERKMDGKAHTEYLKL
mdpevgngcvqedeelgwgkslpvpsvQEIVRNDSLCVPERYIqerqnrpdyhSEVSYASSEIPVINMSLLANGDKDELRNFDIACKEWGFFQITNHGIAETVIHNMKEAIAAFFQLPFDEKKKYTMPANDVQGYGQGYVVSEQQKLDWSDVLFLVTLPPSVRNLKLWPVALPGFKESIDQYSTEIRKVTEEIFAKLSLLMGMDTDGLKMLHGEMKQATRMNYYPTCSRPELVLGVSPHSDASTITLLLQDDKITGLqikhkdswipvkpIPDAIVVNIGDVAEVLSNGLYKSVehravtnekkarmsvatfvipseeveigplesmvddkqfprMYRNMKYVDYLRHtlerkmdgkahteylkl
MDPEVGNGCVQEDEELGWGKSLPVPSVQEIVRNDSLCVPERYIQERQNRPDYHSEVSYASSEIPVINMSLLANGDKDELRNFDIACKEWGFFQITNHGIAETVIHNMKEAIAAFFQLPFDEKKKYTMPANDVQGYGQGYVVSEQQKLDWSDVLFLVTLPPSVRNLKLWPVALPGFKESIDQYSTEIRKVTEEIFAKLSLLMGMDTDGLKMLHGEMKQATRMNYYPTCSRPELVLGVSPHSDASTITLLLQDDKITGLQIKHKDSWIPVKPIPDAIVVNIGDVAEVLSNGLYKSVEHRAVTNEKKARMSVATFVIPSEEVEIGPLESMVDDKQFPRMYRNMKYVDYLRHTLERKMDGKAHTEYLKL
****************GWGKSLPVPSVQEIVRNDSLCVPERYIQ***********VSYASSEIPVINMSLLANGDKDELRNFDIACKEWGFFQITNHGIAETVIHNMKEAIAAFFQLPFDEKKKYTMPANDVQGYGQGYVVSEQQKLDWSDVLFLVTLPPSVRNLKLWPVALPGFKESIDQYSTEIRKVTEEIFAKLSLLMGMDTDGLKMLHGEMKQATRMNYYPTCSRPELVLGVSPHSDASTITLLLQDDKITGLQIKHKDSWIPVKPIPDAIVVNIGDVAEVLSNGLYKSVEHRAVTNEKKARMSVATFVIPSEEVEIGPLESMVDDKQFPRMYRNMKYVDYLRHTL***************
*********************LPVPSVQEIVRNDSLCVPERYIQERQ************SSEIPVINMSLLANGDKDELRNFDIACKEWGFFQITNHGIAETVIHNMKEAIAAFFQLPFDEKKKYTMPANDVQGYGQGYVVSEQQKLDWSDVLFLVTLPPSVRNLKLWPVALPGFKESIDQYSTEIRKVTEEIFAKLSLLMGMDTDGLKMLHGEMKQATRMNYYPTCSRPELVLGVSPHSDASTITLLLQDDKITGLQIKHKDSWIPVKPIPDAIVVNIGDVAEVLSNGLYKSVEHRAVTNEKKARMSVATFVIPSEEVEIGPLESMVDDKQFPRMYRNMKYVDYLRHTLERKMDGKAHTEYLKL
********CVQEDEELGWGKSLPVPSVQEIVRNDSLCVPERYIQERQNRPDYHSEVSYASSEIPVINMSLLANGDKDELRNFDIACKEWGFFQITNHGIAETVIHNMKEAIAAFFQLPFDEKKKYTMPANDVQGYGQGYVVSEQQKLDWSDVLFLVTLPPSVRNLKLWPVALPGFKESIDQYSTEIRKVTEEIFAKLSLLMGMDTDGLKMLHGEMKQATRMNYYPTCSRPELVLGVSPHSDASTITLLLQDDKITGLQIKHKDSWIPVKPIPDAIVVNIGDVAEVLSNGLYKSVEHRAVTNEKKARMSVATFVIPSEEVEIGPLESMVDDKQFPRMYRNMKYVDYLRHTLERKMDGKAHTEYLKL
********************SLPVPSVQEIVRNDSLCVPERYIQERQNRPDYHSEVSYASSEIPVINMSLLANGDKDELRNFDIACKEWGFFQITNHGIAETVIHNMKEAIAAFFQLPFDEKKKYTMPANDVQGYGQGYVVSEQQKLDWSDVLFLVTLPPSVRNLKLWPVALPGFKESIDQYSTEIRKVTEEIFAKLSLLMGMDTDGLKMLHGEMKQATRMNYYPTCSRPELVLGVSPHSDASTITLLLQDDKITGLQIKHKDSWIPVKPIPDAIVVNIGDVAEVLSNGLYKSVEHRAVTNEKKARMSVATFVIPSEEVEIGPLESMVDDKQFPRMYRNMKYVDYLRHTLERKMDGKAHTE**KL
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MDPEVGNGCVQEDEELGWGKSLPVPSVQEIVRNDSLCVPERYIQERQNRPDYHSEVSYASSEIPVINMSLLANGDKDELRNFDIACKEWGFFQITNHGIAETVIHNMKEAIAAFFQLPFDEKKKYTMPANDVQGYGQGYVVSEQQKLDWSDVLFLVTLPPSVRNLKLWPVALPGFKESIDQYSTEIRKVTEEIFAKLSLLMGMDTDGLKMLHGEMKQATRMNYYPTCSRPELVLGVSPHSDASTITLLLQDDKITGLQIKHKDSWIPVKPIPDAIVVNIGDVAEVLSNGLYKSVEHRAVTNEKKARMSVATFVIPSEEVEIGPLESMVDDKQFPRMYRNMKYVDYLRHTLERKMDGKAHTEYLKL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query365 2.2.26 [Sep-21-2011]
D4N502360 Codeine O-demethylase OS= N/A no 0.945 0.958 0.402 1e-75
Q39224358 Protein SRG1 OS=Arabidops no no 0.939 0.958 0.388 2e-74
D4N501364 Probable 2-oxoglutarate/F N/A no 0.945 0.947 0.392 2e-72
A2A1A0352 S-norcoclaurine synthase N/A no 0.931 0.965 0.422 4e-71
D4N500364 Thebaine 6-O-demethylase N/A no 0.947 0.950 0.379 2e-70
Q9ZWQ9335 Flavonol synthase/flavano N/A no 0.821 0.895 0.381 9e-55
Q7XZQ6337 Flavonol synthase/flavano N/A no 0.857 0.928 0.343 3e-51
Q41452349 Flavonol synthase/flavano N/A no 0.849 0.888 0.355 1e-50
Q9M547334 Flavonol synthase/flavano N/A no 0.876 0.958 0.355 2e-50
Q07512348 Flavonol synthase/flavano N/A no 0.838 0.879 0.355 3e-50
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function desciption
 Score =  283 bits (724), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 142/353 (40%), Positives = 223/353 (63%), Gaps = 8/353 (2%)

Query: 19  GKSLPVPSVQEIVRNDSLCVPERYIQERQNRPDYHSEVSYASSEIPVINMSLLANGD--- 75
           G  L +PSVQE+ +     +P RY    ++  +           +PVI++  L + +   
Sbjct: 10  GNGLSIPSVQELAKLTLAEIPSRYTCTGESPLNNIGASVTDDETVPVIDLQNLLSPEPVV 69

Query: 76  -KDELRNFDIACKEWGFFQITNHGIAETVIHNMKEAIAAFFQLPFDEKKKYTMPANDVQG 134
            K EL     ACKEWGFFQ+ NHG+   ++ N+K  I  FF LP +EK KY     D +G
Sbjct: 70  GKLELDKLHSACKEWGFFQLVNHGVDALLMDNIKSEIKGFFNLPMNEKTKYGQQDGDFEG 129

Query: 135 YGQGYVVSEQQKLDWSDVLFLVTLPPSVRNLKLWP-VALPGFKESIDQYSTEIRKVTEEI 193
           +GQ Y+ SE Q+LDW++V  +++LP  +R   L+P + LP F+E+++ Y ++++K++  +
Sbjct: 130 FGQPYIESEDQRLDWTEVFSMLSLPLHLRKPHLFPELPLP-FRETLESYLSKMKKLSTVV 188

Query: 194 FAKL-SLLMGMDTDGLKMLHGEMKQATRMNYYPTCSRPELVLGVSPHSDASTITLLLQDD 252
           F  L   L  ++  G+  L  +  Q  RMNYYP C RPELVLG++ HSD S +T+LLQ +
Sbjct: 189 FEMLEKSLQLVEIKGMTDLFEDGLQTMRMNYYPPCPRPELVLGLTSHSDFSGLTILLQLN 248

Query: 253 KITGLQIKHKDSWIPVKPIPDAIVVNIGDVAEVLSNGLYKSVEHRAVTNEKKARMSVATF 312
           ++ GLQI+ ++ WI +KP+PDA +VN+GD+ E+++NG+Y+SVEHRAV N  K R+S+ATF
Sbjct: 249 EVEGLQIRKEERWISIKPLPDAFIVNVGDILEIMTNGIYRSVEHRAVVNSTKERLSIATF 308

Query: 313 VIPSEEVEIGPLESMVDDKQFPRMYRNMKYVDYLRHTLERKMDGKAHTEYLKL 365
                E EIGP+ S+V   + P +++  +Y D L+  L RK+DGK+  +Y+++
Sbjct: 309 HDSKLESEIGPISSLV-TPETPALFKRGRYEDILKENLSRKLDGKSFLDYMRM 360
Non-heme dioxygenase catalyzing the conversion of codeine to morphine. Catalyzes also, with lower efficiency, the 3-O-demethylation of thebaine to oripavine and of (S)-scoulerine to 3-O-demethylscoulerine. No activity with (S)-reticuline, salutaridine, papaverine, (S)-corytuberine, oripavine, pavine or noscapine.
Papaver somniferum (taxid: 3469)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 3EC: 2
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function description
>sp|D4N501|DIOX2_PAPSO Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum GN=DIOX2 PE=2 SV=1 Back     alignment and function description
>sp|A2A1A0|NCS1_COPJA S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1 Back     alignment and function description
>sp|D4N500|DIOX1_PAPSO Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1 Back     alignment and function description
>sp|Q9ZWQ9|FLS_CITUN Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1 Back     alignment and function description
>sp|Q7XZQ6|FLS_PETCR Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1 Back     alignment and function description
>sp|Q41452|FLS_SOLTU Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1 Back     alignment and function description
>sp|Q9M547|FLS_EUSER Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma exaltatum subsp. russellianum GN=FLS PE=2 SV=1 Back     alignment and function description
>sp|Q07512|FLS_PETHY Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query365
296086204367 unnamed protein product [Vitis vinifera] 0.997 0.991 0.673 1e-150
359486618358 PREDICTED: protein SRG1-like [Vitis vini 0.972 0.991 0.679 1e-147
297740339 943 unnamed protein product [Vitis vinifera] 0.961 0.372 0.553 1e-117
356567965364 PREDICTED: protein SRG1-like [Glycine ma 0.950 0.953 0.541 1e-112
356567967361 PREDICTED: protein SRG1-like [Glycine ma 0.958 0.969 0.541 1e-110
225440426368 PREDICTED: protein SRG1-like [Vitis vini 0.912 0.904 0.541 1e-107
388517601370 unknown [Medicago truncatula] 0.961 0.948 0.484 6e-99
225440424340 PREDICTED: protein SRG1 [Vitis vinifera] 0.912 0.979 0.480 1e-93
356523175377 PREDICTED: LOW QUALITY PROTEIN: protein 0.956 0.925 0.468 1e-88
357504569336 Protein SRG1 [Medicago truncatula] gi|35 0.884 0.961 0.460 1e-85
>gi|296086204|emb|CBI31645.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  536 bits (1380), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 246/365 (67%), Positives = 304/365 (83%), Gaps = 1/365 (0%)

Query: 1   MDPEVGNGCVQEDEELGWGKSLPVPSVQEIVRNDSLCVPERYIQERQNRPDYHSEVSYAS 60
           MD +  NG +QE +ELGWGKSLPVPSVQEIV+NDS  VPERYIQE +NRP   S+    S
Sbjct: 1   MDTKAENGVMQEHQELGWGKSLPVPSVQEIVKNDSQSVPERYIQEHKNRP-LGSDSCPVS 59

Query: 61  SEIPVINMSLLANGDKDELRNFDIACKEWGFFQITNHGIAETVIHNMKEAIAAFFQLPFD 120
           S+IP+I++ LLA GD+DE    + ACKEWGFFQ+ NHG+AE V+  MK A+AAFF+LP +
Sbjct: 60  SQIPIIDLHLLACGDEDERTKLNFACKEWGFFQVINHGVAEEVLQKMKTAVAAFFELPLE 119

Query: 121 EKKKYTMPANDVQGYGQGYVVSEQQKLDWSDVLFLVTLPPSVRNLKLWPVALPGFKESID 180
           EKKKY+M  ND+QGYGQGYVVS+QQKLDW D++FL+TLP   + +K WPV + GFKE I+
Sbjct: 120 EKKKYSMAENDLQGYGQGYVVSDQQKLDWGDLIFLLTLPNKYKKMKYWPVTVTGFKEGIE 179

Query: 181 QYSTEIRKVTEEIFAKLSLLMGMDTDGLKMLHGEMKQATRMNYYPTCSRPELVLGVSPHS 240
           +Y+TE+ KVTEEI   LSLLMGMD DGL++LH EMKQA R+NYYPTCSRP+LVLGVSPHS
Sbjct: 180 EYATEMHKVTEEILGNLSLLMGMDKDGLRLLHAEMKQAMRLNYYPTCSRPDLVLGVSPHS 239

Query: 241 DASTITLLLQDDKITGLQIKHKDSWIPVKPIPDAIVVNIGDVAEVLSNGLYKSVEHRAVT 300
           DAS+IT+LLQDD+ITGLQI+HK  W+PVKPIP+A+VVNIGD  E  +NG+YKS+EHRAVT
Sbjct: 240 DASSITVLLQDDEITGLQIRHKGGWVPVKPIPNALVVNIGDAIEAWNNGMYKSIEHRAVT 299

Query: 301 NEKKARMSVATFVIPSEEVEIGPLESMVDDKQFPRMYRNMKYVDYLRHTLERKMDGKAHT 360
           NEK+ARMS+ATF+IP ++VEIGP++S+V     P MY+ +KYVDYLR+TL R+MDGKAHT
Sbjct: 300 NEKRARMSIATFLIPEDDVEIGPVDSVVGTYHQPVMYKKIKYVDYLRYTLSREMDGKAHT 359

Query: 361 EYLKL 365
           E+LKL
Sbjct: 360 EFLKL 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359486618|ref|XP_002278096.2| PREDICTED: protein SRG1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297740339|emb|CBI30521.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356567965|ref|XP_003552185.1| PREDICTED: protein SRG1-like [Glycine max] Back     alignment and taxonomy information
>gi|356567967|ref|XP_003552186.1| PREDICTED: protein SRG1-like [Glycine max] Back     alignment and taxonomy information
>gi|225440426|ref|XP_002271148.1| PREDICTED: protein SRG1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|388517601|gb|AFK46862.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|225440424|ref|XP_002271117.1| PREDICTED: protein SRG1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356523175|ref|XP_003530217.1| PREDICTED: LOW QUALITY PROTEIN: protein SRG1-like [Glycine max] Back     alignment and taxonomy information
>gi|357504569|ref|XP_003622573.1| Protein SRG1 [Medicago truncatula] gi|355497588|gb|AES78791.1| Protein SRG1 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query365
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.936 0.939 0.444 3.2e-81
TAIR|locus:2020422361 AT1G17010 [Arabidopsis thalian 0.967 0.977 0.404 9.6e-73
TAIR|locus:2020407358 SRG1 "senescence-related gene 0.942 0.960 0.392 4.1e-72
TAIR|locus:2122679353 AT4G25310 [Arabidopsis thalian 0.926 0.957 0.396 6.7e-72
TAIR|locus:2122669356 AT4G25300 [Arabidopsis thalian 0.936 0.960 0.385 2.3e-71
TAIR|locus:2202980356 AT1G78550 [Arabidopsis thalian 0.967 0.991 0.376 1.4e-69
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.931 0.963 0.383 2.8e-66
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.923 0.908 0.368 1.7e-59
TAIR|locus:2010242348 AT1G49390 [Arabidopsis thalian 0.860 0.902 0.375 1.4e-57
TAIR|locus:2149214348 AT5G20400 [Arabidopsis thalian 0.879 0.922 0.357 5.3e-56
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
 Identities = 155/349 (44%), Positives = 225/349 (64%)

Query:    24 VPSVQEIVRNDSLCVPERYIQERQNRPDYHSEVS--YASSEIPVINMSLLANGDKD---- 77
             +  VQE++++    VPER+I+E   R    S +   +   +IPVI++S L+  D D    
Sbjct:    14 IDDVQELIKSKPNKVPERFIREEYERGVVVSSLKTHHLHHQIPVIDLSKLSKPDNDDFFF 73

Query:    78 ELRNFDIACKEWGFFQITNHGIAETVIHNMKEAIAAFFQLPFDEKKKYTMPANDVQGYGQ 137
             E+     AC++WGFFQ+ NHGI   V+ +++E  + FF +P +EKKKY M    VQGYGQ
Sbjct:    74 EILKLSQACEDWGFFQVINHGIEVEVVEDIEEVASEFFDMPLEEKKKYPMEPGTVQGYGQ 133

Query:   138 GYVVSEQQKLDWSDVLFLVTLPPSVRNLKLWPVALPGFKESIDQYSTEIRKVTEEIFAKL 197
              ++ SE QKLDW ++  L   PP +RN KLWP     F ES++ YS EIR++ + +   +
Sbjct:   134 AFIFSEDQKLDWCNMFALGVHPPQIRNPKLWPSKPARFSESLEGYSKEIRELCKRLLKYI 193

Query:   198 SLLMGMDTDGLKMLHGEMKQATRMNYYPTCSRPELVLGVSPHSDASTITLLLQD-DKITG 256
             ++ +G+  +  + + GE  QA RMNYYP CS P+LVLG+SPHSD S +T+L Q  +   G
Sbjct:   194 AISLGLKEERFEEMFGEAVQAVRMNYYPPCSSPDLVLGLSPHSDGSALTVLQQSKNSCVG 253

Query:   257 LQIKHKDSWIPVKPIPDAIVVNIGDVAEVLSNGLYKSVEHRAVTNEKKARMSVATFVIPS 316
             LQI   ++W+PVKP+P+A+V+NIGD  EVLSNG YKSVEHRAVTN +K R+++ TF  P+
Sbjct:   254 LQILKDNTWVPVKPLPNALVINIGDTIEVLSNGKYKSVEHRAVTNREKERLTIVTFYAPN 313

Query:   317 EEVEIGPLESMVDDKQFPRMYRNMKYVDYLRHTLERKMDGKAHTEYLKL 365
              EVEI P+  +VDD+  P  YR+  + DY  H +  K+ GK   ++ K+
Sbjct:   314 YEVEIEPMSELVDDETNPCKYRSYNHGDYSYHYVSNKLQGKKSLDFAKI 362
GO:0005737 "cytoplasm" evidence=ISM
GO:0008152 "metabolic process" evidence=ISS
GO:0016491 "oxidoreductase activity" evidence=IEA;ISS
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2020422 AT1G17010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020407 SRG1 "senescence-related gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122679 AT4G25310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122669 AT4G25300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202980 AT1G78550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010242 AT1G49390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149214 AT5G20400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.110.766
4th Layer1.14.11.9LOW CONFIDENCE prediction!
3rd Layer1.14.11.13LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query365
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 1e-126
PLN02216357 PLN02216, PLN02216, protein SRG1 1e-106
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 1e-90
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 1e-79
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 8e-77
PLN02704335 PLN02704, PLN02704, flavonol synthase 1e-72
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 2e-71
PLN02947374 PLN02947, PLN02947, oxidoreductase 7e-68
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 3e-65
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 9e-61
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 5e-59
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 3e-54
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 5e-53
PLN02904357 PLN02904, PLN02904, oxidoreductase 2e-51
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 2e-50
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 1e-49
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 2e-48
PLN02997325 PLN02997, PLN02997, flavonol synthase 2e-47
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 2e-45
PLN02485329 PLN02485, PLN02485, oxidoreductase 8e-39
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 1e-37
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 4e-35
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 3e-32
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 1e-31
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 1e-30
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 1e-29
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 6e-23
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 1e-09
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score =  366 bits (941), Expect = e-126
 Identities = 160/347 (46%), Positives = 225/347 (64%), Gaps = 6/347 (1%)

Query: 24  VPSVQEIVRNDSLCVPERYIQERQNRPDYHSEVSYASSEIPVINMSLLANGDKDELR--- 80
           +  VQE+ ++    VPER+I++   RPD  S+  +A  +IPVI+ S L  GD DEL    
Sbjct: 14  IDDVQELRKSKPTTVPERFIRDMDERPDLASDTLHAPDDIPVIDFSRLVKGDNDELFSEI 73

Query: 81  -NFDIACKEWGFFQITNHGIAETVIHNMKEAIAAFFQLPFDEKKKYTMPANDVQGYGQGY 139
               +AC+EWGFFQ+ NHGI   ++  +++    FF LP +EK+KY M    VQGYGQ +
Sbjct: 74  LKLRLACEEWGFFQVINHGIELELLEEIEKVAREFFMLPLEEKQKYPMAPGTVQGYGQAF 133

Query: 140 VVSEQQKLDWSDVLFLVTLPPSVRNLKLWPVALPGFKESIDQYSTEIRKVTEEIFAKLSL 199
           V SE QKLDW ++  L   P  +RN KLWP     F E+++ YS EIR++ + +   +++
Sbjct: 134 VFSEDQKLDWCNMFALGVEPHFIRNPKLWPTKPARFSETLEVYSREIRELCQRLLKYIAM 193

Query: 200 LMGMDTDGLKMLHGEMKQATRMNYYPTCSRPELVLGVSPHSDASTITLLLQD-DKITGLQ 258
            +G+  D  + + GE  QA RMNYYP CSRP+LVLG+SPHSD S +T+L Q      GLQ
Sbjct: 194 TLGLKEDRFEEMFGEAVQAVRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQGKGSCVGLQ 253

Query: 259 IKHKDSWIPVKPIPDAIVVNIGDVAEVLSNGLYKSVEHRAVTNEKKARMSVATFVIPSEE 318
           I   ++W+PV P+P+A+V+NIGD  EVL+NG YKSVEHRAVTN++K R+S+ TF  PS E
Sbjct: 254 ILKDNTWVPVHPVPNALVINIGDTLEVLTNGKYKSVEHRAVTNKEKDRLSIVTFYAPSYE 313

Query: 319 VEIGPLESMVDDKQFPRMYRNMKYVDYLRHTLERKMDGKAHTEYLKL 365
           VE+GP+  +VDD+  P  YR   + +Y RH +  K+ GK   E+ K+
Sbjct: 314 VELGPMPELVDDEN-PCKYRRYNHGEYSRHYVTSKLQGKKTLEFAKI 359

Length = 361
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 365
PLN02216357 protein SRG1 100.0
PLN02947374 oxidoreductase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02904357 oxidoreductase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02704335 flavonol synthase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02485329 oxidoreductase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.92
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.91
PLN03176120 flavanone-3-hydroxylase; Provisional 99.9
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.35
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 94.88
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 94.52
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 92.26
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 89.04
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 88.88
TIGR02466201 conserved hypothetical protein. This family consis 84.18
>PLN02216 protein SRG1 Back     alignment and domain information 
Probab=100.00  E-value=1.1e-87  Score=654.05  Aligned_cols=340  Identities=41%  Similarity=0.795  Sum_probs=307.3

Q ss_pred             CCcchHHHHhC-CCCCCccccccccCCCCCCCCCC-CCCCCCCceEeCCCCCCCC--HHHHHHHHHHHHhcceEEEecCC
Q 047368           23 PVPSVQEIVRN-DSLCVPERYIQERQNRPDYHSEV-SYASSEIPVINMSLLANGD--KDELRNFDIACKEWGFFQITNHG   98 (365)
Q Consensus        23 ~~~~v~~l~~~-~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~iPvIDls~l~~~~--~~~~~~l~~A~~~~GFF~l~nHG   98 (365)
                      .++.||.|+.+ ++++||++||  +|++++|.+.. .....+||||||+.+.+++  .+++++|++||++||||||+|||
T Consensus        13 ~~~~~~~~~~~~~~~~~p~~~v--~p~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHG   90 (357)
T PLN02216         13 IVPSVQEMVKEKMITTVPPRYV--RSDQDKTEIAVDSGLSSEIPIIDMKRLCSSTAMDSEVEKLDFACKEWGFFQLVNHG   90 (357)
T ss_pred             cchhHHHHHhcCCCCCCCHhhC--cCcccCCccccccCcCCCCCeEEChhccCCccHHHHHHHHHHHHHHCcEEEEECCC
Confidence            45679999876 7899999999  99999875321 1112479999999987654  35789999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHhCCCHHHHhhccCCCCCcccccCCcccccccccccccccccccCCCccccccCCCCCccchHHH
Q 047368           99 IAETVIHNMKEAIAAFFQLPFDEKKKYTMPANDVQGYGQGYVVSEQQKLDWSDVLFLVTLPPSVRNLKLWPVALPGFKES  178 (365)
Q Consensus        99 v~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~~~~~~~~~~~~dw~e~~~~~~~p~~~~~~~~wP~~~~~fr~~  178 (365)
                      |+.++++++++++++||+||.|+|+++...++..+||+........+..||+|.|.+...|.....++.||+.++.||+.
T Consensus        91 I~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~WP~~p~~fr~~  170 (357)
T PLN02216         91 IDSSFLDKVKSEIQDFFNLPMEEKKKLWQRPGEIEGFGQAFVVSEDQKLDWADMFFLTMQPVRLRKPHLFPKLPLPFRDT  170 (357)
T ss_pred             CCHHHHHHHHHHHHHHHcCCHHHHHhhhcCCCCccccCccccccccccCCceeeeeeeccCcccccchhcccchHHHHHH
Confidence            99999999999999999999999999977556678998765444566789999998876665556789999989999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHhhcc-ccccccccccCCCCCCCCCCCcccccCCCceEEEEeCCCCCCc
Q 047368          179 IDQYSTEIRKVTEEIFAKLSLLMGMDTDGLKMLHGE-MKQATRMNYYPTCSRPELVLGVSPHSDASTITLLLQDDKITGL  257 (365)
Q Consensus       179 ~~~y~~~~~~la~~ll~~ls~~Lgl~~~~~~~~~~~-~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTiL~q~d~v~GL  257 (365)
                      +++|+++|.+|+.+||++|+++|||++++|.+.+.. ..+.||+||||||++++.++|+++|||+|+||||+|+++++||
T Consensus       171 ~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~~v~GL  250 (357)
T PLN02216        171 LETYSAEVKSIAKILFAKMASALEIKPEEMEKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTILLQVNEVEGL  250 (357)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCchheeEEeecCCCCCcccccCccCcccCceEEEEEecCCCCce
Confidence            999999999999999999999999999999998875 4578999999999999999999999999999999995569999


Q ss_pred             eEEeCCeEEEecCCCCeEEEEcchHHHHHcCCcccCccccCCCCCcCCccceEEeecCCCCceEecCccccCCCCCCCCC
Q 047368          258 QIKHKDSWIPVKPIPDAIVVNIGDVAEVLSNGLYKSVEHRAVTNEKKARMSVATFVIPSEEVEIGPLESMVDDKQFPRMY  337 (365)
Q Consensus       258 qV~~~g~W~~V~p~pg~~vVniGD~Lq~lSnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~I~pl~~~v~~~~~p~~y  337 (365)
                      ||+++|+|++|+|+||+|||||||+||+||||+|||++|||++++.++||||+||++|+.|++|.|+++|++++ +|++|
T Consensus       251 QV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~lv~~~-~p~~Y  329 (357)
T PLN02216        251 QIKKDGKWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHNTGMGKEIGPAKSLVERQ-KAALF  329 (357)
T ss_pred             eEEECCEEEECCCCCCeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEEEEEecCCCCCeEeCcHHHcCCC-CCCCC
Confidence            99999999999999999999999999999999999999999999889999999999999999999999999998 99999


Q ss_pred             CCcCHHHHHHHHHHhcCCCCCcccccCC
Q 047368          338 RNMKYVDYLRHTLERKMDGKAHTEYLKL  365 (365)
Q Consensus       338 ~~~~~~ey~~~~~~~~~~~~~~~~~~~~  365 (365)
                      ++++|+||++.++++.+.+++.++.+||
T Consensus       330 ~~~t~~ey~~~~~~~~~~~~~~~~~~~~  357 (357)
T PLN02216        330 KSLTTKEYFDGLFSRELDGKAYLDAMRI  357 (357)
T ss_pred             CCcCHHHHHHHHHhcccCCcchhhhhcC
Confidence            9999999999999999999999999886

>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query365
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-46
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-46
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 3e-45
1w9y_A319 The Structure Of Acc Oxidase Length = 319 7e-36
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 3e-19
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 1e-08
1w28_A331 Conformational Flexibility Of The C-Terminus With I 5e-08
1e5h_A308 Delta-R307a Deacetoxycephalosporin C Synthase Compl 1e-07
1unb_A311 Deacetoxycephalosporin C Synthase Complexed With 2- 1e-07
1e5i_A306 Delta-R306 Deacetoxycephalosporin C Synthase Comple 1e-07
1hjf_A311 Alteration Of The Co-Substrate Selectivity Of Deace 3e-07
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 4e-05
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 4e-05
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  183 bits (464), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 184/344 (53%), Gaps = 22/344 (6%)
Query: 24  VPSVQEIVRNDSLCVPERYIQERQNRPD----YHSEVSYASSEIPVINMSLLANGDKDEL 79
           V  V+ + ++  + +P+ YI+ ++        +  E      ++P I++  + + D+   
Sbjct: 4   VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIR 63
Query: 80  RN----FDIACKEWGFFQITNHGIAETVIHNMKEAIAAFFQLPFDEKKKYTMPAND---- 131
            N       A  +WG   + NHGI   ++  +K+A   FF L  +EK+KY   AND    
Sbjct: 64  ENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKY---ANDQATG 120
Query: 132 -VQGYGQGYVVSEQQKLDWSDVLFLVTLPPSVRNLKLWPVALPGFKESIDQYSTEIRKVT 190
            +QGYG     +   +L+W D  F +  P   R+L +WP     + E+  +Y+  +R + 
Sbjct: 121 KIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLA 180
Query: 191 EEIFAKLSLLMGMDTDGLKMLHGEMKQ---ATRMNYYPTCSRPELVLGVSPHSDASTITL 247
            ++F  LS+ +G++ D L+   G +++     ++NYYP C +PEL LGV  H+D S +T 
Sbjct: 181 TKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTF 240
Query: 248 LLQDDKITGLQIKHKDSWIPVKPIPDAIVVNIGDVAEVLSNGLYKSVEHRAVTNEKKARM 307
           +L +  + GLQ+ ++  W+  K +PD+IV++IGD  E+LSNG YKS+ HR + N++K R+
Sbjct: 241 ILHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRI 299
Query: 308 SVATFV-IPSEEVEIGPLESMVDDKQFPRMYRNMKYVDYLRHTL 350
           S A F   P +++ + PL  MV  +  P  +    +  ++ H L
Sbjct: 300 SWAVFCEPPKDKIVLKPLPEMVSVES-PAKFPPRTFAQHIEHKL 342
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|1W28|A Chain A, Conformational Flexibility Of The C-Terminus With Implications For Substrate Binding And Catalysis In A New Crystal Form Of Deacetoxycephalosporin C Synthase Length = 331 Back     alignment and structure
>pdb|1E5H|A Chain A, Delta-R307a Deacetoxycephalosporin C Synthase Complexed With Succinate And Carbon Dioxide Length = 308 Back     alignment and structure
>pdb|1UNB|A Chain A, Deacetoxycephalosporin C Synthase Complexed With 2-Oxoglutarate And Ampicillin Length = 311 Back     alignment and structure
>pdb|1E5I|A Chain A, Delta-R306 Deacetoxycephalosporin C Synthase Complexed With Iron And 2-Oxoglutarate Length = 306 Back     alignment and structure
>pdb|1HJF|A Chain A, Alteration Of The Co-Substrate Selectivity Of Deacetoxycephalosporin C Synthase: The Role Of Arginine-258 Length = 311 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query365
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-149
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-136
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 2e-89
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 4e-82
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 7e-77
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 5e-75
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  423 bits (1089), Expect = e-149
 Identities = 103/358 (28%), Positives = 187/358 (52%), Gaps = 20/358 (5%)

Query: 22  LPVPSVQEIVRNDSLCVPERYIQERQNRPD----YHSEVSYASSEIPVINMSLLANGD-- 75
           + V  V+ + ++  + +P+ YI+ ++        +  E      ++P I++  + + D  
Sbjct: 2   VAVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEK 61

Query: 76  --KDELRNFDIACKEWGFFQITNHGIAETVIHNMKEAIAAFFQLPFDEKKKY--TMPAND 131
             ++ +     A  +WG   + NHGI   ++  +K+A   FF L  +EK+KY        
Sbjct: 62  IRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGK 121

Query: 132 VQGYGQGYVVSEQQKLDWSDVLFLVTLPPSVRNLKLWPVALPGFKESIDQYSTEIRKVTE 191
           +QGYG     +   +L+W D  F +  P   R+L +WP     + E+  +Y+  +R +  
Sbjct: 122 IQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLAT 181

Query: 192 EIFAKLSLLMGMDTDGLKMLHGEMK---QATRMNYYPTCSRPELVLGVSPHSDASTITLL 248
           ++F  LS+ +G++ D L+   G ++      ++NYYP C +PEL LGV  H+D S +T +
Sbjct: 182 KVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 241

Query: 249 LQDDKITGLQIKHKDSWIPVKPIPDAIVVNIGDVAEVLSNGLYKSVEHRAVTNEKKARMS 308
           L +  + GLQ+ ++  W+  K +PD+IV++IGD  E+LSNG YKS+ HR + N++K R+S
Sbjct: 242 LHNM-VPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRIS 300

Query: 309 VATFVIPSEE-VEIGPLESMVDDKQFPRMYRNMKYVDYLRHTLERKMDGKAHTEYLKL 365
            A F  P ++ + + PL  MV  +  P  +    +  ++ H    K+ GK   E +  
Sbjct: 301 WAVFCEPPKDKIVLKPLPEMVSVES-PAKFPPRTFAQHIEH----KLFGKEQEELVSE 353
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query365
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 94.95
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 91.89
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 89.45
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 84.0
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 82.11
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 80.88
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=1.9e-86  Score=645.93  Aligned_cols=333  Identities=31%  Similarity=0.619  Sum_probs=301.7

Q ss_pred             CCcchHHHHhCCCCCCccccccccCCCCCCCCCC---CC---CCCCCceEeCCCCCCCCH----HHHHHHHHHHHhcceE
Q 047368           23 PVPSVQEIVRNDSLCVPERYIQERQNRPDYHSEV---SY---ASSEIPVINMSLLANGDK----DELRNFDIACKEWGFF   92 (365)
Q Consensus        23 ~~~~v~~l~~~~~~~~p~~~~~~~~~~~~~~~~~---~~---~~~~iPvIDls~l~~~~~----~~~~~l~~A~~~~GFF   92 (365)
                      ++++||+|+++++.+||++||  +|++++|....   ..   ...+||||||+.|.++++    +++++|.+||++||||
T Consensus         3 ~~~~v~~l~~~~~~~vP~~~~--~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF   80 (356)
T 1gp6_A            3 AVERVESLAKSGIISIPKEYI--RPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVM   80 (356)
T ss_dssp             CCCCHHHHHHTTCSSCCGGGS--CCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEE
T ss_pred             CcccHHHHHhcCCCCCCHHhc--CCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEE
Confidence            577899999999999999999  99888875321   01   123699999999976654    3689999999999999


Q ss_pred             EEecCCCCHHHHHHHHHHHHHHhCCCHHHHhhccCCC--CCcccccCCcccccccccccccccccccCCCccccccCCCC
Q 047368           93 QITNHGIAETVIHNMKEAIAAFFQLPFDEKKKYTMPA--NDVQGYGQGYVVSEQQKLDWSDVLFLVTLPPSVRNLKLWPV  170 (365)
Q Consensus        93 ~l~nHGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~--~~~~GY~~~~~~~~~~~~dw~e~~~~~~~p~~~~~~~~wP~  170 (365)
                      ||+||||+.++++++++.+++||+||.|+|+++.+..  ..++||+..+.....+..||+|.|.+...|......|.||+
T Consensus        81 ~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~  160 (356)
T 1gp6_A           81 HLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPK  160 (356)
T ss_dssp             EEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCC
T ss_pred             EEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCC
Confidence            9999999999999999999999999999999998744  46899988765556678899999999876654456799999


Q ss_pred             CccchHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHhhc---cccccccccccCCCCCCCCCCCcccccCCCceEE
Q 047368          171 ALPGFKESIDQYSTEIRKVTEEIFAKLSLLMGMDTDGLKMLHG---EMKQATRMNYYPTCSRPELVLGVSPHSDASTITL  247 (365)
Q Consensus       171 ~~~~fr~~~~~y~~~~~~la~~ll~~ls~~Lgl~~~~~~~~~~---~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTi  247 (365)
                      .+++||+.+++|+++|.+|+.+||++|+++|||++++|.+.+.   ...+.||+||||||++++.++|+++|||+|+|||
T Consensus       161 ~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTl  240 (356)
T 1gp6_A          161 TPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTF  240 (356)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEE
T ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEE
Confidence            9999999999999999999999999999999999999999986   4678899999999999999999999999999999


Q ss_pred             EEeCCCCCCceEEeCCeEEEecCCCCeEEEEcchHHHHHcCCcccCccccCCCCCcCCccceEEeecCCCCc-eEecCcc
Q 047368          248 LLQDDKITGLQIKHKDSWIPVKPIPDAIVVNIGDVAEVLSNGLYKSVEHRAVTNEKKARMSVATFVIPSEEV-EIGPLES  326 (365)
Q Consensus       248 L~q~d~v~GLqV~~~g~W~~V~p~pg~~vVniGD~Lq~lSnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~-~I~pl~~  326 (365)
                      |+| |+++||||+++|+|++|+|+||+|||||||+||+||||+|||++|||++++.++|+||+||++|+.|+ +|+|+++
T Consensus       241 L~q-d~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~  319 (356)
T 1gp6_A          241 ILH-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPE  319 (356)
T ss_dssp             EEE-CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGG
T ss_pred             EEE-cCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChh
Confidence            999 88999999999999999999999999999999999999999999999999889999999999999999 9999999


Q ss_pred             ccCCCCCCCCCCCcCHHHHHHHHHHhcCCCCCc
Q 047368          327 MVDDKQFPRMYRNMKYVDYLRHTLERKMDGKAH  359 (365)
Q Consensus       327 ~v~~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~  359 (365)
                      |++++ +|++|+++||+||++.+++++++|+..
T Consensus       320 ~~~~~-~p~~y~~~t~~eyl~~~~~~~~d~~~~  351 (356)
T 1gp6_A          320 MVSVE-SPAKFPPRTFAQHIEHKLFGKEQEELV  351 (356)
T ss_dssp             GCCSS-SCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred             hcCCC-CCccCCCccHHHHHHHHHHhccCcchh
Confidence            99988 999999999999999999888777654
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 365
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 1e-69
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 4e-61
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 3e-55
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 1e-42
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  219 bits (559), Expect = 1e-69
 Identities = 103/354 (29%), Positives = 186/354 (52%), Gaps = 20/354 (5%)

Query: 22  LPVPSVQEIVRNDSLCVPERYIQERQNRPD----YHSEVSYASSEIPVINMSLLANGDKD 77
           + V  V+ + ++  + +P+ YI+ ++        +  E      ++P I++  + + D+ 
Sbjct: 1   VAVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEK 60

Query: 78  E----LRNFDIACKEWGFFQITNHGIAETVIHNMKEAIAAFFQLPFDEKKKYTMPAND-- 131
                +     A  +WG   + NHGI   ++  +K+A   FF L  +EK+KY        
Sbjct: 61  IRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGK 120

Query: 132 VQGYGQGYVVSEQQKLDWSDVLFLVTLPPSVRNLKLWPVALPGFKESIDQYSTEIRKVTE 191
           +QGYG     +   +L+W D  F +  P   R+L +WP     + E+  +Y+  +R +  
Sbjct: 121 IQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLAT 180

Query: 192 EIFAKLSLLMGMDTDGLKMLHGEMKQAT---RMNYYPTCSRPELVLGVSPHSDASTITLL 248
           ++F  LS+ +G++ D L+   G +++     ++NYYP C +PEL LGV  H+D S +T +
Sbjct: 181 KVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 240

Query: 249 LQDDKITGLQIKHKDSWIPVKPIPDAIVVNIGDVAEVLSNGLYKSVEHRAVTNEKKARMS 308
           L +  + GLQ+ ++  W+  K +PD+IV++IGD  E+LSNG YKS+ HR + N++K R+S
Sbjct: 241 LHNM-VPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRIS 299

Query: 309 VATFVIPS-EEVEIGPLESMVDDKQFPRMYRNMKYVDYLRHTLERKMDGKAHTE 361
            A F  P  +++ + PL  MV  +  P  +    +  ++ H    K+ GK   E
Sbjct: 300 WAVFCEPPKDKIVLKPLPEMVSVES-PAKFPPRTFAQHIEH----KLFGKEQEE 348
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query365
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 90.25
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 84.69
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.5e-80  Score=600.87  Aligned_cols=326  Identities=31%  Similarity=0.632  Sum_probs=290.6

Q ss_pred             CCcchHHHHhCCCCCCccccccccCCCCCCCCCC------CCCCCCCceEeCCCCCCCCH----HHHHHHHHHHHhcceE
Q 047368           23 PVPSVQEIVRNDSLCVPERYIQERQNRPDYHSEV------SYASSEIPVINMSLLANGDK----DELRNFDIACKEWGFF   92 (365)
Q Consensus        23 ~~~~v~~l~~~~~~~~p~~~~~~~~~~~~~~~~~------~~~~~~iPvIDls~l~~~~~----~~~~~l~~A~~~~GFF   92 (365)
                      .+..||+|+++|+++||++||  ||++++|.+..      .....+||||||+.|.++++    ..+++|.+||++||||
T Consensus         2 ~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf   79 (349)
T d1gp6a_           2 AVERVESLAKSGIISIPKEYI--RPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVM   79 (349)
T ss_dssp             CCCCHHHHHHTTCSSCCGGGS--CCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEE
T ss_pred             CCcchHHHHhCCCccCCHhhc--CChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEE
Confidence            356799999999999999999  99999986531      12345899999999988775    3579999999999999


Q ss_pred             EEecCCCCHHHHHHHHHHHHHHhCCCHHHHhhccCCC--CCcccccCCcccccccccccccccccccCCCccccccCCCC
Q 047368           93 QITNHGIAETVIHNMKEAIAAFFQLPFDEKKKYTMPA--NDVQGYGQGYVVSEQQKLDWSDVLFLVTLPPSVRNLKLWPV  170 (365)
Q Consensus        93 ~l~nHGv~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~--~~~~GY~~~~~~~~~~~~dw~e~~~~~~~p~~~~~~~~wP~  170 (365)
                      ||+||||+.++++++++++++||+||.|+|+++....  +...||+...........+|.+.+.....+......+.||+
T Consensus        80 ~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~  159 (349)
T d1gp6a_          80 HLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPK  159 (349)
T ss_dssp             EEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCC
T ss_pred             EEEccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhccccccccccccccccc
Confidence            9999999999999999999999999999999997632  34566666555555667788877655545555567799999


Q ss_pred             CccchHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHhhc---cccccccccccCCCCCCCCCCCcccccCCCceEE
Q 047368          171 ALPGFKESIDQYSTEIRKVTEEIFAKLSLLMGMDTDGLKMLHG---EMKQATRMNYYPTCSRPELVLGVSPHSDASTITL  247 (365)
Q Consensus       171 ~~~~fr~~~~~y~~~~~~la~~ll~~ls~~Lgl~~~~~~~~~~---~~~~~lr~~~YPp~~~~~~~~g~~~HtD~~~lTi  247 (365)
                      .++.|++.+++|+++|.+|+.+|+++++++||+++++|.+.+.   ...+.||+||||||+.++..+|+++|||+|+|||
T Consensus       160 ~~~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTl  239 (349)
T d1gp6a_         160 TPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTF  239 (349)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEE
T ss_pred             ccchHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEE
Confidence            9999999999999999999999999999999999999998874   3456899999999999989999999999999999


Q ss_pred             EEeCCCCCCceEEeCCeEEEecCCCCeEEEEcchHHHHHcCCcccCccccCCCCCcCCccceEEeecCCCCceE-ecCcc
Q 047368          248 LLQDDKITGLQIKHKDSWIPVKPIPDAIVVNIGDVAEVLSNGLYKSVEHRAVTNEKKARMSVATFVIPSEEVEI-GPLES  326 (365)
Q Consensus       248 L~q~d~v~GLqV~~~g~W~~V~p~pg~~vVniGD~Lq~lSnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~I-~pl~~  326 (365)
                      |+| +.++||||+++|+|++|+|.+|++|||+||+||+||||+|||++|||+.+++++||||+||++|+.|++| .|+++
T Consensus       240 L~q-~~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~  318 (349)
T d1gp6a_         240 ILH-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPE  318 (349)
T ss_dssp             EEE-CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGG
T ss_pred             Eec-cCCcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHH
Confidence            999 8999999999999999999999999999999999999999999999999999999999999999999865 89999


Q ss_pred             ccCCCCCCCCCCCcCHHHHHHHHHHh
Q 047368          327 MVDDKQFPRMYRNMKYVDYLRHTLER  352 (365)
Q Consensus       327 ~v~~~~~p~~y~~~~~~ey~~~~~~~  352 (365)
                      |++++ +|++|+++||+||++.++..
T Consensus       319 ~v~~~-~p~~y~~~t~~e~~~~rl~~  343 (349)
T d1gp6a_         319 MVSVE-SPAKFPPRTFAQHIEHKLFG  343 (349)
T ss_dssp             GCCSS-SCCSSCCEEHHHHHHHHHHH
T ss_pred             HcCCC-CCCCCCCccHHHHHHHHHhc
Confidence            99999 99999999999999998743
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure