Citrus Sinensis ID: 047377

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Protein Sequence
MESVMSAMGIAIACLHKDPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSVSDISDDASSSSQVFARIRTILW
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHccccccccccccHHHHHccccccccccccHHHHHHHHccccccccccccEEEEEEcccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccccccccccccccccHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHccccccccccEHHHHHHccccccHHHHHHHcHEHHHHHcccccccHcccEHHHHHHHHHcccHHHHHHHHHHHccHHHHcccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MESVMSAMGIAIAClhkdpskrpsMVDIVYALSKsddllsdisddalsssqlisgekaIDEEGKVLWAKVEGIlegnegrkVKRVKEWMDEILLQDSISMEGVMRAMGIAIAClhkdpskrpsmVDIVHAVsksddsvsdisddassssQVFARIRTILW
Flexible Loop (DISEMBL)
MESVMSAMGIAIAclhkdpskrpSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKvegilegnegrkvkrvkEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVsksddsvsdisddassssqvfARIRTILW
Low Complexity Region (SEG)
MESVMSAMGIAIACLHKDPSKRPSMVDIVYalsksddllsdisddalsssqlisGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVsksddsvsdisddassssQVFARIRTILW
Disordered region (IsUnstruct)
********GIAIACLH********MVDIVYALS*************************IDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEGVMRAMGIAIACLH*********************************************
Disordered Region (DISOPRED)
********GIAIA***********MVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVS****************************
Disordered Region (DISEMBL)
MESVMSAMGIAIACLHKDPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVS******************VFARIRTILW
Disordered Region (DISPRO)
***VMSAMGIAIACLHKDPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSVSDI***ASSSSQVFARIRTILW
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESVMSAMGIAIACLHKDPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSVSDISDDASSSSQVFARIRTILW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	160	2.2.26 [Sep-21-2011]
Q9LQQ8	423	Probable serine/threonine	no	no	0.706	0.267	0.283	0.0003

>sp|Q9LQQ8|RLCK7_ARATH Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1

 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 14/127 (11%)

Query: 30  YALSKSDDLLSDISDDALSSSQLISGEKAID------EEGKVLWAKVEGILEGNEGRKVK 83
           YA++      SDI    +   +LI+G KAID      ++  V WA+           K +
Sbjct: 278 YAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPL--------FKDR 329

Query: 84  RVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSVSDISD 143
           R    M + LLQ    + G+ +A+ I+  C+ + P+ RP + D+V A++    S  D + 
Sbjct: 330 RNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLALNFLASSKYDPNS 389

Query: 144 DASSSSQ 150
            +SSS +
Sbjct: 390 PSSSSGK 396

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	160
224099871	524	predicted protein [Populus trichocarpa]	0.65	0.198	0.660	1e-32
224153289	164	predicted protein [Populus trichocarpa]	0.625	0.609	0.653	7e-30
255551969	615	serine-threonine protein kinase, plant-t	0.643	0.167	0.615	7e-29
297737149	595	unnamed protein product [Vitis vinifera]	0.65	0.174	0.571	1e-26
225432878	622	PREDICTED: probable LRR receptor-like se	0.65	0.167	0.571	1e-26
18033737	124	protein kinase-like protein [Capsicum an	0.65	0.838	0.548	3e-26
147771926	591	hypothetical protein VITISV_032728 [Viti	0.625	0.169	0.564	6e-25
356499893	625	PREDICTED: probable receptor-like protei	0.65	0.166	0.533	1e-24
388502470	158	unknown [Lotus japonicus]	0.65	0.658	0.504	8e-23
357487233	660	Cysteine-rich receptor-like protein kina	0.65	0.157	0.476	1e-22

>gi|224099871|ref|XP_002311653.1| predicted protein [Populus trichocarpa] gi|222851473|gb|EEE89020.1| predicted protein [Populus trichocarpa]

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 70/106 (66%), Positives = 85/106 (80%), Gaps = 2/106 (1%)

Query: 51  QLISGEKAIDEEGKVLWAKVEGILEGN--EGRKVKRVKEWMDEILLQDSISMEGVMRAMG 108
           +LISG +AIDEEGKVLWA+  G+LEGN  E RKVKR+  WMD++LL++S SME VM  M 
Sbjct: 419 ELISGREAIDEEGKVLWAEAIGVLEGNVEERRKVKRLTAWMDKVLLEESCSMESVMNTMA 478

Query: 109 IAIACLHKDPSKRPSMVDIVHAVSKSDDSVSDISDDASSSSQVFAR 154
           +AIACLH+DPSKRPSMVDIV+A+ KSDD   DIS+D  S+ QV AR
Sbjct: 479 VAIACLHRDPSKRPSMVDIVYALCKSDDLFFDISEDGLSNPQVMAR 524

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224153289|ref|XP_002337339.1| predicted protein [Populus trichocarpa] gi|222838806|gb|EEE77157.1| predicted protein [Populus trichocarpa]

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 66/101 (65%), Positives = 81/101 (80%), Gaps = 1/101 (0%)

Query: 51  QLISGEKAIDEEGKVLWAKVEGILEGN-EGRKVKRVKEWMDEILLQDSISMEGVMRAMGI 109
           +LISG++AIDEEGKVLWA+  GIL+GN E RKVKR+  WMD++LL+ S  ME VM AM +
Sbjct: 54  ELISGKEAIDEEGKVLWAEASGILQGNVEERKVKRLTPWMDKVLLEQSCLMESVMNAMVV 113

Query: 110 AIACLHKDPSKRPSMVDIVHAVSKSDDSVSDISDDASSSSQ 150
           AIACLH+DPSKRPSMVDIV+A+ K+DD   DIS+D  S  Q
Sbjct: 114 AIACLHRDPSKRPSMVDIVYALCKTDDLFFDISEDVLSDPQ 154

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551969|ref|XP_002517029.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223543664|gb|EEF45192.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  132 bits (331), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 64/104 (61%), Positives = 83/104 (79%), Gaps = 1/104 (0%)

Query: 51  QLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEGVMRAMGIA 110
           +LISG++AIDEEG+VLWAKV G  +GNE +KVKR+K +MDE LL++S SME ++  M +A
Sbjct: 513 ELISGKEAIDEEGRVLWAKVSGNWDGNEEKKVKRLKGFMDESLLRESCSMESIIHVMNVA 572

Query: 111 IACLHKDPSKRPSMVDIVHAVSKSDDSVSDISDDASSSSQVFAR 154
           +ACLHKDP+KRPSMVDIV+ + KS D   DIS+D  S SQ+ AR
Sbjct: 573 VACLHKDPAKRPSMVDIVYDLCKS-DLFFDISEDGLSDSQIVAR 615

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737149|emb|CBI26350.3| unnamed protein product [Vitis vinifera]

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 60/105 (57%), Positives = 79/105 (75%), Gaps = 1/105 (0%)

Query: 51  QLISGEKAIDEEGKVLWAKVEGILEG-NEGRKVKRVKEWMDEILLQDSISMEGVMRAMGI 109
           +LISG++A+DEEG+VLW    GILEG +E  K KRVK+WMDE LL++S SM+ V+  M +
Sbjct: 491 ELISGKEAVDEEGRVLWMSARGILEGKDEKVKAKRVKDWMDEGLLRESCSMDSVINVMAV 550

Query: 110 AIACLHKDPSKRPSMVDIVHAVSKSDDSVSDISDDASSSSQVFAR 154
           A AC H+DPSKRPSMVDIV+A+ K +D   DIS+D  + + V AR
Sbjct: 551 ATACTHRDPSKRPSMVDIVYALCKCEDFFFDISEDGLAPAAVIAR 595

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432878|ref|XP_002280070.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g48740-like [Vitis vinifera]

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 60/105 (57%), Positives = 79/105 (75%), Gaps = 1/105 (0%)

Query: 51  QLISGEKAIDEEGKVLWAKVEGILEG-NEGRKVKRVKEWMDEILLQDSISMEGVMRAMGI 109
           +LISG++A+DEEG+VLW    GILEG +E  K KRVK+WMDE LL++S SM+ V+  M +
Sbjct: 518 ELISGKEAVDEEGRVLWMSARGILEGKDEKVKAKRVKDWMDEGLLRESCSMDSVINVMAV 577

Query: 110 AIACLHKDPSKRPSMVDIVHAVSKSDDSVSDISDDASSSSQVFAR 154
           A AC H+DPSKRPSMVDIV+A+ K +D   DIS+D  + + V AR
Sbjct: 578 ATACTHRDPSKRPSMVDIVYALCKCEDFFFDISEDGLAPAAVIAR 622

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18033737|gb|AAL57228.1| protein kinase-like protein [Capsicum annuum]

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 57/104 (54%), Positives = 83/104 (79%)

Query: 51  QLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEGVMRAMGIA 110
           +L+SG++AID+EGKVLWAKV    EG+E RKV++++EWMDE  L++ ++ME V+  M +A
Sbjct: 21  ELVSGKEAIDDEGKVLWAKVGEFSEGSEERKVRKLQEWMDESFLREELTMESVVNVMSVA 80

Query: 111 IACLHKDPSKRPSMVDIVHAVSKSDDSVSDISDDASSSSQVFAR 154
           I+C++KDPS+RP MV+IV+A+SKS D  SD+S++  S  QV AR
Sbjct: 81  ISCVNKDPSRRPGMVEIVYALSKSIDLFSDVSEEGLSPRQVTAR 124

Source: Capsicum annuum

Species: Capsicum annuum

Genus: Capsicum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147771926|emb|CAN66762.1| hypothetical protein VITISV_032728 [Vitis vinifera]

 Score =  119 bits (297), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 57/101 (56%), Positives = 75/101 (74%), Gaps = 1/101 (0%)

Query: 55  GEKAIDEEGKVLWAKVEGILEG-NEGRKVKRVKEWMDEILLQDSISMEGVMRAMGIAIAC 113
           G++A+DEEG+VLW    GILEG +E  K KRVK+WMDE LL++S SM+ V+  M +A AC
Sbjct: 491 GKEAVDEEGRVLWMSARGILEGKDEKVKAKRVKDWMDEGLLRESCSMDSVINVMAVATAC 550

Query: 114 LHKDPSKRPSMVDIVHAVSKSDDSVSDISDDASSSSQVFAR 154
            H+DPSKRPSMVDIV+A+ K +D   DIS+D  + + V AR
Sbjct: 551 THRDPSKRPSMVDIVYALCKCEDFFFDISEDGLAPAAVIAR 591

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356499893|ref|XP_003518770.1| PREDICTED: probable receptor-like protein kinase At1g49730-like [Glycine max]

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 56/105 (53%), Positives = 79/105 (75%), Gaps = 1/105 (0%)

Query: 51  QLISGEKAIDEEGKVLWAKVEGILE-GNEGRKVKRVKEWMDEILLQDSISMEGVMRAMGI 109
           +LISG++ I+EEG +LWA      E  NE  K +R+KEW+D+ +L+++ SME +M A+ +
Sbjct: 521 ELISGKEVINEEGNLLWASAIKTFEVDNEQEKTRRLKEWLDKDILRETFSMESLMGALTV 580

Query: 110 AIACLHKDPSKRPSMVDIVHAVSKSDDSVSDISDDASSSSQVFAR 154
           AIACLH+DPSKRPS++DIV+A+SKS+D   DISDD   S +V AR
Sbjct: 581 AIACLHRDPSKRPSIMDIVYALSKSEDMGFDISDDGIGSPRVIAR 625

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388502470|gb|AFK39301.1| unknown [Lotus japonicus]

 Score =  111 bits (278), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 53/105 (50%), Positives = 79/105 (75%), Gaps = 1/105 (0%)

Query: 51  QLISGEKAIDEEGKVLWAKVEGILE-GNEGRKVKRVKEWMDEILLQDSISMEGVMRAMGI 109
           +L+SG++AIDEEG +LWA      E GNE  K +R++EW+D+ +L+++ SME +M  + +
Sbjct: 54  ELVSGKEAIDEEGNLLWASAIRTFEVGNEVEKGRRLREWLDKGVLRETCSMESLMGVVAV 113

Query: 110 AIACLHKDPSKRPSMVDIVHAVSKSDDSVSDISDDASSSSQVFAR 154
           AIACLH+DP+KRPS+VDIV+A+SKS+D   D+SD+   S +  AR
Sbjct: 114 AIACLHRDPTKRPSIVDIVYALSKSEDIGFDVSDEGIGSPRAMAR 158

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357487233|ref|XP_003613904.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355515239|gb|AES96862.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/105 (47%), Positives = 77/105 (73%), Gaps = 1/105 (0%)

Query: 51  QLISGEKAIDEEGKVLWAKVEGILE-GNEGRKVKRVKEWMDEILLQDSISMEGVMRAMGI 109
           +LISG++ IDEEG VLWA      E  NE  K +R+KEW+D  +L+++ SME +M  + +
Sbjct: 556 ELISGKEVIDEEGNVLWASAIKTFEVKNEQEKARRLKEWLDRTMLKETCSMESLMGVLHV 615

Query: 110 AIACLHKDPSKRPSMVDIVHAVSKSDDSVSDISDDASSSSQVFAR 154
           AIACL++DPSKRPS++DIV+++SK +++  ++SDD   S ++ AR
Sbjct: 616 AIACLNRDPSKRPSIIDIVYSLSKCEEAGFELSDDGFGSERLVAR 660

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

No hits with e-value below 0.001 by BLAST

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	160
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.84
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.77
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.74
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.72
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.69
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.68
PHA02988	283	hypothetical protein; Provisional	99.66
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.66
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.65
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.63
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.63
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.61
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.58
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.58
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.57
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.54
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.54
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.54
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.53
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.53
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.53
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.52
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.52
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.52
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.52
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.52
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.51
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.51
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.51
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.51
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.5
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.5
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.5
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.5
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.5
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.5
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.49
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.49
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.49
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.48
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.48
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.48
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.48
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.48
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.47
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.47
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.47
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.47
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.47
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.47
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.47
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.47
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.47
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.47
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.46
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.46
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.46
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.46
KOG0578	550	consensus p21-activated serine/threonine protein k	99.46
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.46
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.46
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.46
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.45
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.45
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.45
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.45
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.45
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.44
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.44
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.44
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.44
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.44
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.44
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.43
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.43
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.43
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.43
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.43
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.43
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.42
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.42
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.42
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.42
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.42
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.42
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.42
KOG0198	313	consensus MEKK and related serine/threonine protei	99.41
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.41
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.41
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.41
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.41
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.41
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.41
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.41
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.41
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.4
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.4
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.4
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.4
PTZ00283	496	serine/threonine protein kinase; Provisional	99.4
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.4
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.4
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.4
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.4
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.39
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.39
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.39
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.38
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.38
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.38
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.38
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.38
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.38
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.38
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.38
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.38
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.38
PHA02882	294	putative serine/threonine kinase; Provisional	99.38
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.37
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.37
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.37
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.37
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.37
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.37
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.37
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.37
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.37
PTZ00284	467	protein kinase; Provisional	99.37
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.36
PTZ00267	478	NIMA-related protein kinase; Provisional	99.36
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.36
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.35
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.35
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.35
KOG0589	426	consensus Serine/threonine protein kinase [General	99.35
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.35
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.35
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.34
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.34
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.34
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.34
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.34
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.34
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.33
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.33
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.33
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.33
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.33
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.32
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.32
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.32
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.32
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.32
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.32
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.31
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.31
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.31
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.31
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.31
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.31
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.31
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.31
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.31
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.31
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.31
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.31
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.31
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.3
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.3
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.3
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.3
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.3
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.3
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.3
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.3
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.3
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.3
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.29
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.29
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.29
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.29
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.29
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.29
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.29
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.29
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.29
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.29
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.29
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.28
PLN00181	793	protein SPA1-RELATED; Provisional	99.28
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.28
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.28
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.28
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.27
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.27
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.27
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.27
PTZ00036	440	glycogen synthase kinase; Provisional	99.27
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.27
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.27
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.27
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.27
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.26
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.26
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.26
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.26
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.26
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.26
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.26
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.26
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.26
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.25
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.25
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.25
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.25
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.25
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.25
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.25
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.25
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.25
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.25
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.25
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.25
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.25
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.25
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.24
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.24
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.24
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.24
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.24
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.24
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.24
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.24
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.24
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.24
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.23
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.23
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.23
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.23
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.23
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.22
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.22
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.22
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.22
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.22
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.22
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.22
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.22
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.21
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.21
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.21
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.21
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.21
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.21
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.21
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.21
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.21
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.2
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.19
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.19
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.19
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.19
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.19
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.18
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.18
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.18
KOG0584	632	consensus Serine/threonine protein kinase [General	99.18
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.18
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.18
PHA03212	391	serine/threonine kinase US3; Provisional	99.18
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.17
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.17
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.16
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.16
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.16
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.16
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.16
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.16
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.16
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.16
PHA03207	392	serine/threonine kinase US3; Provisional	99.16
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.16
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.16
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.15
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.15
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.15
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.15
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.15
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.15
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.15
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.15
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.15
PHA03209	357	serine/threonine kinase US3; Provisional	99.14
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.14
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.14
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.13
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.13
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.13
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.13
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.13
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.12
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.12
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.11
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.11
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.11
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.11
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.11
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.1
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.1
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.1
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.1
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.1
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.1
PHA03211	461	serine/threonine kinase US3; Provisional	99.09
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.09
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.08
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.08
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.08
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.08
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.08
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.07
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.07
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.07
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.07
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.07
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.06
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.06
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.06
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.06
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.05
PLN00009	294	cyclin-dependent kinase A; Provisional	99.05
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.05
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.05
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.05
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.04
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.04
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.04
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.03
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.02
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.02
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.02
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.02
KOG0605	550	consensus NDR and related serine/threonine kinases	99.02
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.01
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.01
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.99
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.99
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.98
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	98.98
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.98
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.96
PHA03210	501	serine/threonine kinase US3; Provisional	98.96
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	98.94
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	98.93
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	98.93
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.92
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.92
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.91
KOG0661	538	consensus MAPK related serine/threonine protein ki	98.91
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	98.89
KOG0610	459	consensus Putative serine/threonine protein kinase	98.89
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.89
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	98.85
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.8
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	98.78
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	98.77
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	98.75
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.72
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.7
KOG1027	903	consensus Serine/threonine protein kinase and endo	98.69
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.68
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.67
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.65
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	98.64
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	98.61
KOG0690	516	consensus Serine/threonine protein kinase [Signal	98.59
KOG0695	593	consensus Serine/threonine protein kinase [Signal	98.59
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.54
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	98.54
KOG3653	534	consensus Transforming growth factor beta/activin	98.42
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	98.33
KOG0586	596	consensus Serine/threonine protein kinase [General	98.32
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	98.3
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	98.3
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	98.28
KOG0611	668	consensus Predicted serine/threonine protein kinas	98.27
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	98.23
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	98.2
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.2
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	98.16
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.11
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.09
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	97.99
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	97.97
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	97.96
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.92
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	97.89
KOG0607	463	consensus MAP kinase-interacting kinase and relate	97.87
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	97.85
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	97.82
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	97.7
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	97.66
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.41
KOG1167	418	consensus Serine/threonine protein kinase of the C	97.3
KOG0606	1205	consensus Microtubule-associated serine/threonine	97.28
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	97.23
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	97.23
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	97.21
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	97.01
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	96.82
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	96.77
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	96.49
KOG1266	458	consensus Protein kinase [Signal transduction mech	96.47
KOG2137	700	consensus Protein kinase [Signal transduction mech	96.19
COG0515	384	SPS1 Serine/threonine protein kinase [General func	96.16
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	96.09
KOG1152	772	consensus Signal transduction serine/threonine kin	95.94
KOG0606	1205	consensus Microtubule-associated serine/threonine	95.55
KOG0590	601	consensus Checkpoint kinase and related serine/thr	93.14
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	90.58
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	82.39

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=4.1e-21  Score=150.96  Aligned_cols=111  Identities=23%  Similarity=0.298  Sum_probs=94.9

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCC----chhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEE----GKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      .++.||++||+...+.++.|+|||||||+++|+++|+.+.+..    ...+..|+...+.      ...+.+++|+++..
T Consensus       239 ~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~------~~~~~eiiD~~l~~  312 (361)
T KOG1187|consen  239 MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLE------EGKLREIVDPRLKE  312 (361)
T ss_pred             CCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHH------CcchhheeCCCccC
Confidence            5678999999999999999999999999999999999988732    2346666667775      55889999999822


Q ss_pred             CCCCH-HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           96 DSISM-EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        96 ~~~~~-~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .+++. .++..+..++.+|++.+|.+||+|.+|++.|+.+..
T Consensus       313 ~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  313 GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence            67775 688899999999999999999999999999976644

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.77  E-value=2.2e-19  Score=140.98  Aligned_cols=102  Identities=19%  Similarity=0.184  Sum_probs=78.4

Q ss_pred             CCCCCCcchhhHhh--hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCC
Q 047377           19 PSKRPSMVDIVYAL--SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        19 ~~~~~~y~aPE~~~--~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      ..+++.|||||.+.  ...|+.|+|||||||++||++||+.||..........  ...               .... +.
T Consensus       204 ~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~--~v~---------------~~~~-Rp  265 (362)
T KOG0192|consen  204 VAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVAS--AVV---------------VGGL-RP  265 (362)
T ss_pred             CCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHH--HHH---------------hcCC-CC
Confidence            45567899999999  6689999999999999999999999997332211111  111               1222 34


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccCC
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSV  138 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~~  138 (160)
                      ..|..+...+..++..||+.+|.+||+|.+|+..|+.+....
T Consensus       266 ~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~  307 (362)
T KOG0192|consen  266 PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI  307 (362)
T ss_pred             CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence            555557778899999999999999999999999999887643

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.74  E-value=8.1e-19  Score=145.79  Aligned_cols=96  Identities=15%  Similarity=0.111  Sum_probs=78.0

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..||+||.+..++|+.+||||||||+|||+++ |+.|+.+-.                  ...+.+.+..+- ..++|..
T Consensus       669 IRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS------------------n~EVIe~i~~g~-lL~~Pe~  729 (774)
T KOG1026|consen  669 IRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS------------------NQEVIECIRAGQ-LLSCPEN  729 (774)
T ss_pred             eecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc------------------hHHHHHHHHcCC-cccCCCC
Confidence            37999999999999999999999999999987 888886211                  111222232332 3578888


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      |+.++..||..||+.+|++||+|+||..+|++..+.
T Consensus       730 CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~  765 (774)
T KOG1026|consen  730 CPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA  765 (774)
T ss_pred             CCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence            899999999999999999999999999999988654

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.72  E-value=2.2e-18  Score=136.95  Aligned_cols=94  Identities=13%  Similarity=0.063  Sum_probs=75.5

Q ss_pred             CcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHHH
Q 047377           24 SMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEG  102 (160)
Q Consensus        24 ~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  102 (160)
                      -|.|||.+..+.|+.|||||||||+|||++| |+.|++.-.                  ...+.+.++.+. +-+.|..|
T Consensus       369 kWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms------------------n~ev~~~le~Gy-Rlp~P~~C  429 (468)
T KOG0197|consen  369 KWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS------------------NEEVLELLERGY-RLPRPEGC  429 (468)
T ss_pred             eecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC------------------HHHHHHHHhccC-cCCCCCCC
Confidence            6999999999999999999999999999998 888876211                  111122233333 44677778


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          103 VMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       103 ~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      +..+.++|..||+.+|++||||..+...|+.+..
T Consensus       430 P~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~  463 (468)
T KOG0197|consen  430 PDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT  463 (468)
T ss_pred             CHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence            8899999999999999999999999998887754

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.69  E-value=1.8e-17  Score=141.81  Aligned_cols=95  Identities=17%  Similarity=0.164  Sum_probs=76.1

Q ss_pred             CcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHHH
Q 047377           24 SMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEG  102 (160)
Q Consensus        24 ~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  102 (160)
                      .|||||.+..+.|+.|+|||||||++||++| |..||+...  .+.-+.....+              .+|   +.|..|
T Consensus       869 kWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~--n~~v~~~~~~g--------------gRL---~~P~~C  929 (1025)
T KOG1095|consen  869 KWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRS--NFEVLLDVLEG--------------GRL---DPPSYC  929 (1025)
T ss_pred             ecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcc--hHHHHHHHHhC--------------Ccc---CCCCCC
Confidence            6999999999999999999999999999998 889987222  11111122221              233   667777


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          103 VMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       103 ~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      +..+.++|..||+.+|.+||+|..|+.++..+.+.
T Consensus       930 P~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~  964 (1025)
T KOG1095|consen  930 PEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA  964 (1025)
T ss_pred             ChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence            88889999999999999999999999999988764

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.68  E-value=3.3e-17  Score=116.04  Aligned_cols=116  Identities=15%  Similarity=0.037  Sum_probs=74.8

Q ss_pred             HhHhhhhcccCCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhh
Q 047377            8 MGIAIACLHKDPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKE   87 (160)
Q Consensus         8 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (160)
                      ||++..........++.|+|||++.++.++.++|||||||+++|+++|+.|+..... ..........       .. ..
T Consensus        53 fG~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~-~~~~~~~~~~-------~~-~~  123 (176)
T smart00750       53 DGSVAFKTPEQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE-LSAILEILLN-------GM-PA  123 (176)
T ss_pred             ccceEeeccccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch-hcHHHHHHHH-------Hh-cc
Confidence            444433322333456899999999999999999999999999999999999863221 0011011111       00 00


Q ss_pred             hhccccCCCCCCHHHHH--HHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377           88 WMDEILLQDSISMEGVM--RAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus        88 ~~d~~l~~~~~~~~~~~--~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                       .++.  ....+.....  .+.+++.+||..+|.+||++.+++..+..+.
T Consensus       124 -~~~~--~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~  170 (176)
T smart00750      124 -DDPR--DRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF  170 (176)
T ss_pred             -CCcc--ccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence             0000  0011122222  5789999999999999999999999887653

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PHA02988 hypothetical protein; Provisional

Probab=99.66  E-value=6.1e-17  Score=123.26  Aligned_cols=99  Identities=13%  Similarity=0.089  Sum_probs=72.0

Q ss_pred             CCCCcchhhHhhh--cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           21 KRPSMVDIVYALS--KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        21 ~~~~y~aPE~~~~--~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      +.+.|+|||.+.+  +.++.++|||||||++||+++|+.||..........  ....               ... ....
T Consensus       182 ~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~--~i~~---------------~~~-~~~~  243 (283)
T PHA02988        182 NFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYD--LIIN---------------KNN-SLKL  243 (283)
T ss_pred             CcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHH--HHHh---------------cCC-CCCC
Confidence            3468999999976  689999999999999999999999997332111111  1111               111 1122


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      +..+...+.+++.+||+.+|.+||++.+++..|+.+++.
T Consensus       244 ~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~~  282 (283)
T PHA02988        244 PLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKFY  282 (283)
T ss_pred             CCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHhc
Confidence            223445678999999999999999999999999887653

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.66  E-value=1.5e-17  Score=134.03  Aligned_cols=116  Identities=13%  Similarity=0.062  Sum_probs=84.9

Q ss_pred             hHHHHHhHhhhhcccCCCC------CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcC
Q 047377            3 SVMSAMGIAIACLHKDPSK------RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEG   76 (160)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~------~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~   76 (160)
                      .+.|+-+++.+.--++.++      +..|||||+++....++|+||||||||||||+||..||..-....     -++. 
T Consensus       249 d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA-----IIwG-  322 (904)
T KOG4721|consen  249 DVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA-----IIWG-  322 (904)
T ss_pred             ceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe-----eEEe-
Confidence            3445555555544444433      357999999999999999999999999999999999986111100     0111 


Q ss_pred             CccccccchhhhhccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           77 NEGRKVKRVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        77 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                                 +-...| ....|..|+..+.-|+..||+-.|..||+|++|+..|.-...
T Consensus       323 -----------VGsNsL-~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~p  370 (904)
T KOG4721|consen  323 -----------VGSNSL-HLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASP  370 (904)
T ss_pred             -----------ccCCcc-cccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCH
Confidence                       111344 556777888888889999999999999999999999975544

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.65  E-value=2.6e-16  Score=137.18  Aligned_cols=108  Identities=19%  Similarity=0.299  Sum_probs=82.4

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCC---chhHHHHHHHHHcCCccccccchhhhhccccCCC--
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEE---GKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQD--   96 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~--   96 (160)
                      .+.|+|||+...+.++.++|||||||++||+++|+.|++..   ......++.....      ......++|+.+ ..  
T Consensus       841 t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~  913 (968)
T PLN00113        841 SSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYS------DCHLDMWIDPSI-RGDV  913 (968)
T ss_pred             cccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcC------ccchhheeCccc-cCCC
Confidence            47899999999899999999999999999999999998622   1223333323332      333455666665 33  


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ..+......+.+++.+||+.+|.+||+|.+|++.|+++.+
T Consensus       914 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        914 SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            2344667788899999999999999999999999998855

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.63  E-value=1.2e-16  Score=124.16  Aligned_cols=110  Identities=15%  Similarity=0.156  Sum_probs=87.6

Q ss_pred             HHhHhhhhcccCCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccch
Q 047377            7 AMGIAIACLHKDPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRV   85 (160)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      +|...--|++.+-++...||++|.+....|+..+|||||||++||++| |+.|+.+-+.   ..+...+.          
T Consensus       446 LFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP---fEm~~ylk----------  512 (563)
T KOG1024|consen  446 LFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP---FEMEHYLK----------  512 (563)
T ss_pred             cCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH---HHHHHHHh----------
Confidence            456667799999998889999999999999999999999999999987 8999863221   11222332          


Q ss_pred             hhhhccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377           86 KEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus        86 ~~~~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                           .+. +...|.+|+.++..+|.+||...|++||+++|++.-|....
T Consensus       513 -----dGy-RlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~  556 (563)
T KOG1024|consen  513 -----DGY-RLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH  556 (563)
T ss_pred             -----ccc-eecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence                 222 34566777788999999999999999999999999887653

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.63  E-value=9.6e-17  Score=132.91  Aligned_cols=96  Identities=16%  Similarity=0.150  Sum_probs=78.6

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCC-CCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAID-EEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ..|.|||.+..++++..|||||||||+||+++ |..||- .++                   ..+.+.++... +.+.|.
T Consensus       798 iRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN-------------------QdVIkaIe~gy-RLPpPm  857 (996)
T KOG0196|consen  798 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-------------------QDVIKAIEQGY-RLPPPM  857 (996)
T ss_pred             eeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch-------------------HHHHHHHHhcc-CCCCCC
Confidence            36999999999999999999999999999986 999985 111                   22223333444 556777


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccCC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSV  138 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~~  138 (160)
                      +|+..+.+||+.||++|-.+||.|.+|+..|.++-...
T Consensus       858 DCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP  895 (996)
T KOG0196|consen  858 DCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP  895 (996)
T ss_pred             CCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence            88899999999999999999999999999999987643

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.61  E-value=3.3e-16  Score=118.36  Aligned_cols=94  Identities=16%  Similarity=0.105  Sum_probs=70.5

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.|+|||.+..+.++.++||||||++++|+++ |..||.....   ..+...+.               ... ....+.
T Consensus       189 ~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~---~~~~~~i~---------------~~~-~~~~~~  249 (283)
T cd05048         189 PVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN---QEVIEMIR---------------SRQ-LLPCPE  249 (283)
T ss_pred             cccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHH---------------cCC-cCCCcc
Confidence            467999999988999999999999999999998 9999863221   11111111               111 122334


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      .++..+.+++.+||+.+|.+||++.+|++.|+++
T Consensus       250 ~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~  283 (283)
T cd05048         250 DCPARVYALMIECWNEIPARRPRFKDIHTRLRSW  283 (283)
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence            4556788999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.58  E-value=4.9e-16  Score=129.73  Aligned_cols=94  Identities=13%  Similarity=0.077  Sum_probs=73.3

Q ss_pred             CcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHHH
Q 047377           24 SMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEG  102 (160)
Q Consensus        24 ~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  102 (160)
                      .|||||.+....|+.|||||||||++||++| |..|++.-.  ....+...++               .+. +.+.|..|
T Consensus       486 kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~--~~~~l~~~l~---------------~G~-r~~~P~~c  547 (609)
T KOG0200|consen  486 KWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP--PTEELLEFLK---------------EGN-RMEQPEHC  547 (609)
T ss_pred             eecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC--cHHHHHHHHh---------------cCC-CCCCCCCC
Confidence            5999999999999999999999999999987 888886311  0111112222               222 34566677


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377          103 VMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus       103 ~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      ..++..+|..||+.+|.+||+|.++++.|++..
T Consensus       548 ~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l  580 (609)
T KOG0200|consen  548 SDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL  580 (609)
T ss_pred             CHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence            788899999999999999999999999999853

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.58  E-value=8.9e-16  Score=119.22  Aligned_cols=96  Identities=15%  Similarity=0.114  Sum_probs=69.7

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||++..+.++.++||||||++++|+++ |..||......  ..+...+.      .        ..  ....+..
T Consensus       240 ~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~--~~~~~~~~------~--------~~--~~~~~~~  301 (338)
T cd05102         240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN--EEFCQRLK------D--------GT--RMRAPEN  301 (338)
T ss_pred             ccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc--HHHHHHHh------c--------CC--CCCCCCC
Confidence            57999999998999999999999999999997 99998632210  01111111      0        00  0111222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ....+..++.+||+.+|.+||++.+|++.|+++.+
T Consensus       302 ~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~  336 (338)
T cd05102         302 ATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ  336 (338)
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            33467899999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.57  E-value=1.3e-15  Score=117.12  Aligned_cols=96  Identities=21%  Similarity=0.186  Sum_probs=71.4

Q ss_pred             cCCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc---hhHHHHHHHHHcCCccccccchhhhhcccc
Q 047377           17 KDPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG---KVLWAKVEGILEGNEGRKVKRVKEWMDEIL   93 (160)
Q Consensus        17 ~~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l   93 (160)
                      +.--++-.|||||.+.++.|+.++||||||++++|+.+|+.|+....   ......+....               +.. 
T Consensus       235 ~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv---------------~~p-  298 (364)
T KOG0581|consen  235 NTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIV---------------DEP-  298 (364)
T ss_pred             ccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHh---------------cCC-
Confidence            33445568999999999999999999999999999999999998541   12222222222               211 


Q ss_pred             CCCCCCHH-HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           94 LQDSISME-GVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        94 ~~~~~~~~-~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       ++..|.. ...++...+.+|+++||.+||+..|+++
T Consensus       299 -pP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  299 -PPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             -CCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence             2233433 5567889999999999999999998876

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.54  E-value=1.3e-15  Score=124.24  Aligned_cols=95  Identities=18%  Similarity=0.125  Sum_probs=76.1

Q ss_pred             CcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHHH
Q 047377           24 SMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEG  102 (160)
Q Consensus        24 ~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  102 (160)
                      -|.|||.+..+.++.|+|||+|||+|||+.| |..||+.-+.   ..+..++.               ... +-+-|..|
T Consensus       431 KWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl---SqVY~LLE---------------kgy-RM~~PeGC  491 (1157)
T KOG4278|consen  431 KWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYGLLE---------------KGY-RMDGPEGC  491 (1157)
T ss_pred             cccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH---HHHHHHHh---------------ccc-cccCCCCC
Confidence            6999999999999999999999999999987 8899874322   22333443               222 33455667


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          103 VMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       103 ~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      +..+.+||..||+-+|.+||+|.||.+.++.+.+.
T Consensus       492 PpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~  526 (1157)
T KOG4278|consen  492 PPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS  526 (1157)
T ss_pred             CHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence            77889999999999999999999999999998653

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.54  E-value=3.6e-15  Score=112.81  Aligned_cols=93  Identities=14%  Similarity=0.108  Sum_probs=68.6

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|+|||++..+.++.++||||||++++|+++ |..|+......   .+...+.              +..  ...++.
T Consensus       189 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~~~~~i~--------------~~~--~~~~~~  249 (283)
T cd05091         189 PIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ---DVIEMIR--------------NRQ--VLPCPD  249 (283)
T ss_pred             CccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHH--------------cCC--cCCCCC
Confidence            468999999998999999999999999999998 88887532211   1111111              111  112233


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      .++..+..++..||+.+|.+||++.+|+..|+.
T Consensus       250 ~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         250 DCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             CCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            444567899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.54  E-value=4.6e-15  Score=112.31  Aligned_cols=110  Identities=11%  Similarity=0.082  Sum_probs=73.0

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ...|++||....+.++.++||||||++++|+++|..|+.......... .....+  ......+.+.++... ....+..
T Consensus       173 ~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~  248 (283)
T cd05080         173 PVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEM-IGPKQG--QMTVVRLIELLERGM-RLPCPKN  248 (283)
T ss_pred             CceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhh-hccccc--ccchhhhhhhhhcCC-CCCCCCC
Confidence            346999999988899999999999999999999999875322111100 000000  000111122222222 2233334


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      ....+..++..||+.+|.+||++.+|+..|+.+.
T Consensus       249 ~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         249 CPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             CCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            4567889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.53  E-value=1e-14  Score=117.28  Aligned_cols=99  Identities=11%  Similarity=0.087  Sum_probs=75.0

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|+|||.+..+.|+.++|||||||++||+.+ |..||++-......   ..+              +.... +...+..
T Consensus       326 irWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~---~kI--------------~~~~~-r~~~~~~  387 (474)
T KOG0194|consen  326 IRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVK---AKI--------------VKNGY-RMPIPSK  387 (474)
T ss_pred             ceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHH---HHH--------------HhcCc-cCCCCCC
Confidence            37999999999999999999999999999988 88898743321111   111              11122 3344445


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccCCC
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSVS  139 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~~~  139 (160)
                      .+..+..++..||..+|.+||+|.++.+.|+.+.....
T Consensus       388 ~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  388 TPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             CHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence            56777888889999999999999999999998876543

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.53  E-value=3.6e-15  Score=117.85  Aligned_cols=95  Identities=14%  Similarity=0.091  Sum_probs=68.4

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||++..+.++.++||||||++++|+++ |+.||......  ........               ... ....+..
T Consensus       278 ~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~--~~~~~~~~---------------~~~-~~~~~~~  339 (374)
T cd05106         278 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN--SKFYKMVK---------------RGY-QMSRPDF  339 (374)
T ss_pred             cceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc--HHHHHHHH---------------ccc-CccCCCC
Confidence            46999999988899999999999999999997 99998622110  00011111               111 1111112


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      ....+.+++.+||+.+|.+||++.+|++.|+++.
T Consensus       340 ~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         340 APPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            2356788999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.53  E-value=1.4e-14  Score=108.54  Aligned_cols=100  Identities=11%  Similarity=0.061  Sum_probs=71.4

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ...+.|+|||.+....++.++|+||||++++|+++|..|+.......... ...+.           .   ... +...+
T Consensus       167 ~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~-~~~~~-----------~---~~~-~~~~~  230 (267)
T cd08228         167 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSL-CQKIE-----------Q---CDY-PPLPT  230 (267)
T ss_pred             CCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHH-HHHHh-----------c---CCC-CCCCh
Confidence            45578999999988889999999999999999999999986332211111 11111           0   011 11112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      ......+.+++.+||..+|.+||++.+|++.|+.++
T Consensus       231 ~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         231 EHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             hhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            233456789999999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.52  E-value=5.9e-15  Score=112.32  Aligned_cols=96  Identities=9%  Similarity=0.047  Sum_probs=70.3

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|+|||++....++.++||||||++++|+++ |+.|+.......   +...+.               ... ....+.
T Consensus       188 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~~~~---------------~~~-~~~~~~  248 (291)
T cd05094         188 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE---VIECIT---------------QGR-VLERPR  248 (291)
T ss_pred             ceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHh---------------CCC-CCCCCc
Confidence            357999999998999999999999999999998 999985322111   111111               010 111122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ..+..+.+++.+||+.+|.+||++.+|++.|+.+..
T Consensus       249 ~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         249 VCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence            234567899999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.52  E-value=5.7e-15  Score=110.68  Aligned_cols=93  Identities=16%  Similarity=0.105  Sum_probs=68.5

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ++|++||....+.++.++||||||++++|+++ |..|+.....   ......+.               ... ..+.+..
T Consensus       169 ~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~---~~~~~~~~---------------~~~-~~~~~~~  229 (263)
T cd05052         169 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQVYELLE---------------KGY-RMERPEG  229 (263)
T ss_pred             cccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHH---------------CCC-CCCCCCC
Confidence            47999999988899999999999999999998 8899863221   11111111               111 1122222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      ....+.+++.+||..+|.+||++.++++.|+.+
T Consensus       230 ~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         230 CPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             CCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            345678899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.52  E-value=5.4e-15  Score=111.17  Aligned_cols=93  Identities=15%  Similarity=0.075  Sum_probs=68.3

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+..+.++.++||||||++++|+++ |..||.......   +...+.               ... ....+..
T Consensus       172 ~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~---~~~~~~---------------~~~-~~~~~~~  232 (266)
T cd05064         172 VLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD---VIKAVE---------------DGF-RLPAPRN  232 (266)
T ss_pred             eeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHHHH---------------CCC-CCCCCCC
Confidence            57999999999999999999999999999775 999986322111   111111               111 1122333


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      ++..+.+++.+||+.+|.+||++.+|.+.|+++
T Consensus       233 ~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         233 CPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             CCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            445678899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.52  E-value=1.1e-15  Score=114.84  Aligned_cols=91  Identities=13%  Similarity=0.143  Sum_probs=62.4

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ...|+|||.+..+.++.++||||||++++|+++ |+.|+..........  ....               ..  ....+.
T Consensus       168 ~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~--~~~~---------------~~--~~~~~~  228 (259)
T PF07714_consen  168 PLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIE--KLKQ---------------GQ--RLPIPD  228 (259)
T ss_dssp             GGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHH--HHHT---------------TE--ETTSBT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccc--cccc---------------cc--cceecc
Confidence            357999999999999999999999999999999 678876322111111  1111               11  112222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAV  131 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L  131 (160)
                      .+...+..++..||..+|.+||++.+|++.|
T Consensus       229 ~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  229 NCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             TSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             chhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            3345678899999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.52  E-value=5.9e-15  Score=111.47  Aligned_cols=91  Identities=12%  Similarity=0.043  Sum_probs=66.8

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||++..+.++.++|||||||+++|+++ |..||......   .....+.               ... ....+..
T Consensus       185 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~---~~~~~~~---------------~~~-~~~~~~~  245 (277)
T cd05036         185 IKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ---EVMEFVT---------------GGG-RLDPPKG  245 (277)
T ss_pred             HhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHH---------------cCC-cCCCCCC
Confidence            46999999998999999999999999999996 99998632211   1111111               110 1122223


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVS  132 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~  132 (160)
                      ....+.+++.+|++.+|++||++.+|++.|+
T Consensus       246 ~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         246 CPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            3456788999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.51  E-value=5.6e-15  Score=110.40  Aligned_cols=93  Identities=10%  Similarity=-0.050  Sum_probs=68.5

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+..+.++.++|+||||++++|+++ |..||........   ...+.               ... ..+.+..
T Consensus       162 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~~~i~---------------~~~-~~~~~~~  222 (257)
T cd05116         162 VKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEV---TQMIE---------------SGE-RMECPQR  222 (257)
T ss_pred             ccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHH---------------CCC-CCCCCCC
Confidence            57999999988889999999999999999998 9999863322111   11221               111 1122223


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      ....+.+++.+||+.+|++||++.+|...|++-
T Consensus       223 ~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         223 CPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             CCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence            345678999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.51  E-value=1.7e-14  Score=109.64  Aligned_cols=94  Identities=13%  Similarity=0.123  Sum_probs=69.0

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||......++.++||||||++++|+++ |..|+.....   ..+...+.               ... ....+..
T Consensus       198 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~~~~~~~---------------~~~-~~~~~~~  258 (293)
T cd05053         198 VKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV---EELFKLLK---------------EGY-RMEKPQN  258 (293)
T ss_pred             ccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH---HHHHHHHH---------------cCC-cCCCCCC
Confidence            57999999988899999999999999999997 8888863221   01111111               111 1122223


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      ....+.+++.+||..+|.+||++.++++.|+++.
T Consensus       259 ~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         259 CTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             CCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            3456789999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.51  E-value=7.2e-15  Score=110.79  Aligned_cols=92  Identities=12%  Similarity=0.064  Sum_probs=67.2

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+..+.++.++||||||++++|+++ |..||.........   ..+.               ... ....+..
T Consensus       188 ~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~---~~~~---------------~~~-~~~~~~~  248 (280)
T cd05049         188 IRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVI---ECIT---------------QGR-LLQRPRT  248 (280)
T ss_pred             ceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH---HHHH---------------cCC-cCCCCCC
Confidence            57999999999999999999999999999998 99998532211111   1111               010 1111222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      ....+.+++.+||..+|.+||++.+|++.|++
T Consensus       249 ~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         249 CPSEVYDIMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             CCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence            34567899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.51  E-value=1e-14  Score=113.77  Aligned_cols=96  Identities=15%  Similarity=0.125  Sum_probs=69.6

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|+|||++.+..++.++|||||||+++|+++ |..||......  ......+.               ... ....+..
T Consensus       239 ~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~--~~~~~~~~---------------~~~-~~~~~~~  300 (337)
T cd05054         239 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID--EEFCRRLK---------------EGT-RMRAPEY  300 (337)
T ss_pred             ccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc--HHHHHHHh---------------ccC-CCCCCcc
Confidence            57999999999999999999999999999997 99998632110  01111111               111 1111222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ....+.+++.+||+.+|.+||++.+|++.|+.+.+
T Consensus       301 ~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         301 ATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            33567889999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.50  E-value=1e-14  Score=110.41  Aligned_cols=97  Identities=11%  Similarity=0.106  Sum_probs=69.6

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ...|++||+...+.++.++||||||++++|+++ |..|+........   ...+.               ... ....+.
T Consensus       174 ~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~---~~~~~---------------~~~-~~~~~~  234 (279)
T cd05111         174 PIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV---PDLLE---------------KGE-RLAQPQ  234 (279)
T ss_pred             cccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH---HHHHH---------------CCC-cCCCCC
Confidence            357999999998999999999999999999998 9999863321111   12221               000 001111


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      .+...+..++.+||..+|.+||++.+++..|..+.+.
T Consensus       235 ~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~  271 (279)
T cd05111         235 ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD  271 (279)
T ss_pred             CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence            1223557788999999999999999999999887653

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.50  E-value=7.9e-15  Score=115.93  Aligned_cols=94  Identities=16%  Similarity=0.138  Sum_probs=67.2

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+....++.++||||||++++|+++ |..||......  ......+.               ... ....+..
T Consensus       280 ~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~--~~~~~~~~---------------~~~-~~~~~~~  341 (375)
T cd05104         280 VKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD--SKFYKMIK---------------EGY-RMLSPEC  341 (375)
T ss_pred             cceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch--HHHHHHHH---------------hCc-cCCCCCC
Confidence            46999999999999999999999999999997 88888632110  01111121               110 1111112


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      ....+.+++..||+.+|++||++.+|++.|++.
T Consensus       342 ~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         342 APSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            234678999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.50  E-value=1.5e-14  Score=108.08  Aligned_cols=93  Identities=10%  Similarity=-0.001  Sum_probs=67.1

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|+|||+...+.++.++||||||++++++++ |..||.........   ..+.               ... ..+....
T Consensus       168 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~---~~~~---------------~~~-~~~~~~~  228 (261)
T cd05072         168 IKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVM---SALQ---------------RGY-RMPRMEN  228 (261)
T ss_pred             eecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHH---HHHH---------------cCC-CCCCCCC
Confidence            46999999988899999999999999999998 89998633211111   1111               000 0011112


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      ....+.+++.+|+..+|++||++.++.+.|+++
T Consensus       229 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         229 CPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             CCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            234568899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.50  E-value=1.7e-15  Score=123.38  Aligned_cols=94  Identities=15%  Similarity=0.097  Sum_probs=76.9

Q ss_pred             CcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHHH
Q 047377           24 SMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEG  102 (160)
Q Consensus        24 ~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  102 (160)
                      -||+||.+...+++..||||-|||++||++. |..||..            +.      ...+.-.++.+- +.++|..|
T Consensus       557 KWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqg------------vk------NsDVI~~iEnGe-RlP~P~nC  617 (974)
T KOG4257|consen  557 KWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQG------------VK------NSDVIGHIENGE-RLPCPPNC  617 (974)
T ss_pred             eecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccc------------cc------ccceEEEecCCC-CCCCCCCC
Confidence            6999999999999999999999999999975 9999961            11      122222333332 45778888


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          103 VMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       103 ~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      +..+..++.+||..+|.+||.+.++...|..+.+
T Consensus       618 Pp~LYslmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  618 PPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             ChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence            8899999999999999999999999999988876

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.50  E-value=8.8e-15  Score=111.20  Aligned_cols=97  Identities=8%  Similarity=0.052  Sum_probs=70.0

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|+|||++....++.++||||||++++|+++ |..|+.......   ....+.      ..        ..  ...+.
T Consensus       185 ~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~---~~~~i~------~~--------~~--~~~~~  245 (288)
T cd05093         185 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VIECIT------QG--------RV--LQRPR  245 (288)
T ss_pred             cccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHH------cC--------Cc--CCCCC
Confidence            357999999988899999999999999999998 888886322111   111111      00        00  01111


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      .....+..++.+||+.+|.+||++.+++..|+++.+.
T Consensus       246 ~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         246 TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence            1234578999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.50  E-value=8e-15  Score=114.87  Aligned_cols=89  Identities=19%  Similarity=0.169  Sum_probs=65.8

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +|-|||||++....|+.|+||||+||+.+||.+|.+|+..-           .       +-++...+...- ++.+...
T Consensus       174 TPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~-----------h-------PmrvlflIpk~~-PP~L~~~  234 (467)
T KOG0201|consen  174 TPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKL-----------H-------PMRVLFLIPKSA-PPRLDGD  234 (467)
T ss_pred             cccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCccc-----------C-------cceEEEeccCCC-CCccccc
Confidence            48899999999889999999999999999999999998611           0       111112221111 2222234


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ..+.+.+++..|++++|+.||++.+++.
T Consensus       235 ~S~~~kEFV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  235 FSPPFKEFVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             cCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence            4566788899999999999999998865

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.49  E-value=1.6e-14  Score=109.16  Aligned_cols=96  Identities=15%  Similarity=0.191  Sum_probs=69.8

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ...|+|||+.....++.++||||||++++|+++ |+.|+.......   +...+.               ... ....+.
T Consensus       182 ~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~---------------~~~-~~~~~~  242 (280)
T cd05043         182 PVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE---MAAYLK---------------DGY-RLAQPI  242 (280)
T ss_pred             chhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH---HHHHHH---------------cCC-CCCCCC
Confidence            346999999988889999999999999999998 999986322111   111111               000 111112


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .+...+.+++.+||..+|++||++.+++..|+.+..
T Consensus       243 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~  278 (280)
T cd05043         243 NCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA  278 (280)
T ss_pred             cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            223467889999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.49  E-value=1.2e-14  Score=109.11  Aligned_cols=93  Identities=17%  Similarity=0.205  Sum_probs=68.1

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|++||++..+.++.++||||||++++|+++ |..|+......   .+...+.               ... ..+.+..
T Consensus       174 ~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~---~~~~~i~---------------~~~-~~~~~~~  234 (268)
T cd05063         174 IRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH---EVMKAIN---------------DGF-RLPAPMD  234 (268)
T ss_pred             ceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH---HHHHHHh---------------cCC-CCCCCCC
Confidence            46999999988889999999999999999987 99998632211   1111111               011 1112223


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      ....+.+++.+||+.+|.+||++.+|++.|+++
T Consensus       235 ~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         235 CPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            345678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.49  E-value=1.4e-14  Score=108.15  Aligned_cols=94  Identities=16%  Similarity=0.109  Sum_probs=69.1

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|+|||....+.++.++||||||++++|+++ |..||.......   +...+.               ... ....+..
T Consensus       162 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~---~~~~~~---------------~~~-~~~~~~~  222 (257)
T cd05060         162 LKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE---VIAMLE---------------SGE-RLPRPEE  222 (257)
T ss_pred             ccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH---HHHHHH---------------cCC-cCCCCCC
Confidence            36999999988899999999999999999998 999986332211   111111               000 1112222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      ....+.+++.+||..+|.+||++.+|++.|+++.
T Consensus       223 ~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         223 CPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            3356789999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.48  E-value=2.5e-14  Score=107.22  Aligned_cols=93  Identities=11%  Similarity=0.119  Sum_probs=68.6

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|++||++....++.++||||||++++|+++ |..|+........   ...+.              +..  ....+..
T Consensus       179 ~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~---~~~~~--------------~~~--~~~~~~~  239 (273)
T cd05035         179 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEI---YDYLR--------------HGN--RLKQPED  239 (273)
T ss_pred             ccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHH--------------cCC--CCCCCcC
Confidence            57999999988889999999999999999998 8888863221111   11111              010  1122233


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      ....+.+++.+||+.+|.+||++.+|+..|+++
T Consensus       240 ~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         240 CLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            445778999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.48  E-value=3.4e-14  Score=106.51  Aligned_cols=93  Identities=12%  Similarity=0.056  Sum_probs=68.1

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ...|++||++..+.++.++||||||++++|+++ |..|+.......  . ...+.               ... ....+.
T Consensus       176 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~--~-~~~~~---------------~~~-~~~~~~  236 (269)
T cd05044         176 PVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE--V-LQHVT---------------AGG-RLQKPE  236 (269)
T ss_pred             CccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH--H-HHHHh---------------cCC-ccCCcc
Confidence            367999999999999999999999999999998 999986322111  0 11111               110 112223


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      .....+.+++.+||..+|.+||++.+|++.|++
T Consensus       237 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         237 NCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             cchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            334567899999999999999999999998863

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.48  E-value=5.5e-14  Score=105.31  Aligned_cols=100  Identities=13%  Similarity=0.089  Sum_probs=70.8

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ...+.|+|||+.....++.++|+||||++++++++|..|+.......... ...+           .....+.+    .+
T Consensus       167 ~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~-----------~~~~~~~~----~~  230 (267)
T cd08229         167 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL-CKKI-----------EQCDYPPL----PS  230 (267)
T ss_pred             cCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHH-hhhh-----------hcCCCCCC----Cc
Confidence            34568999999988889999999999999999999999986322111111 0111           11111111    11


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      ......+..++.+||+.+|.+||++.+|++.++++.
T Consensus       231 ~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         231 DHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             ccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            223456788999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.48  E-value=1.6e-14  Score=109.73  Aligned_cols=94  Identities=14%  Similarity=0.192  Sum_probs=69.5

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|++||+.....++.++||||||++++|+++ |..|+.....   ..+.....               ... ....+..
T Consensus       193 ~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~~---------------~~~-~~~~~~~  253 (290)
T cd05045         193 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP---ERLFNLLK---------------TGY-RMERPEN  253 (290)
T ss_pred             ccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHh---------------CCC-CCCCCCC
Confidence            57999999988889999999999999999998 9988863221   11112221               111 1112223


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      ....+..++..|++.+|.+||++.+++..|+++.
T Consensus       254 ~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~  287 (290)
T cd05045         254 CSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM  287 (290)
T ss_pred             CCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence            3356788999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.48  E-value=2.6e-14  Score=106.60  Aligned_cols=93  Identities=14%  Similarity=0.051  Sum_probs=67.7

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|+|||+.....++.++||||||++++|+++ |+.|+.....   ..+...+.               ... ....+..
T Consensus       163 ~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~---~~~~~~~~---------------~~~-~~~~~~~  223 (256)
T cd05082         163 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPRVE---------------KGY-KMDAPDG  223 (256)
T ss_pred             eeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHh---------------cCC-CCCCCCC
Confidence            47999999988889999999999999999997 8888863221   11111111               000 1112223


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      ....+..++.+||+.+|++||++.++++.|+.+
T Consensus       224 ~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         224 CPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             CCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            345678899999999999999999999999764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.47  E-value=3.5e-14  Score=106.15  Aligned_cols=92  Identities=13%  Similarity=0.126  Sum_probs=67.4

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|+|||....+.++.++|+||||++++|+++ |..||.........   ..+               .... ..+.+..
T Consensus       167 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~---~~~---------------~~~~-~~~~~~~  227 (260)
T cd05070         167 IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVL---EQV---------------ERGY-RMPCPQD  227 (260)
T ss_pred             ccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH---HHH---------------HcCC-CCCCCCc
Confidence            46999999988899999999999999999998 88888632211100   111               1111 1122333


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      ....+.+++.+|+..+|.+||++.++...|+.
T Consensus       228 ~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         228 CPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             CCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            34567899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.47  E-value=2.4e-14  Score=110.35  Aligned_cols=96  Identities=18%  Similarity=0.164  Sum_probs=70.2

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|++||++....++.++||||||++++|+++ |..|+........   .....               ... ....+..
T Consensus       175 ~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~---~~~~~---------------~~~-~~~~~~~  235 (316)
T cd05108         175 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI---SSILE---------------KGE-RLPQPPI  235 (316)
T ss_pred             eeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH---HHHHh---------------CCC-CCCCCCC
Confidence            57999999999999999999999999999997 9999863221111   11111               111 1111222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      +...+..++..||..+|.+||++.+++..|..+...
T Consensus       236 ~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~  271 (316)
T cd05108         236 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  271 (316)
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence            334568899999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.47  E-value=2.2e-14  Score=107.98  Aligned_cols=94  Identities=13%  Similarity=0.076  Sum_probs=67.9

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||+.....++.++||||||++++|+++ |..||......   .....+.               ... ..+.+..
T Consensus       175 ~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~---~~~~~~~---------------~~~-~~~~~~~  235 (270)
T cd05047         175 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---ELYEKLP---------------QGY-RLEKPLN  235 (270)
T ss_pred             cccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH---HHHHHHh---------------CCC-CCCCCCc
Confidence            46999999988889999999999999999997 99998532210   0001111               110 1111222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      ....+.+++.+||..+|.+||++.+++..|+.+.
T Consensus       236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         236 CDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            3346789999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.47  E-value=2.4e-14  Score=107.24  Aligned_cols=93  Identities=12%  Similarity=0.043  Sum_probs=68.7

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+..+.++.++||||||++++|+++ |..||......   .+...+.               ... ....+..
T Consensus       162 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~~~---------------~~~-~~~~~~~  222 (257)
T cd05115         162 LKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP---EVMSFIE---------------QGK-RLDCPAE  222 (257)
T ss_pred             cccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH---HHHHHHH---------------CCC-CCCCCCC
Confidence            57999999988889999999999999999996 99998632211   1111111               111 1223333


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      +...+.+++..||..+|++||++.+|.+.|+.+
T Consensus       223 ~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         223 CPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            445678899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.47  E-value=2.5e-14  Score=108.08  Aligned_cols=97  Identities=16%  Similarity=0.146  Sum_probs=70.9

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|++||......++.++||||||++++|+++ |..|+.........   ..+.               ... ....+.
T Consensus       174 ~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~---~~~~---------------~~~-~~~~~~  234 (279)
T cd05109         174 PIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIP---DLLE---------------KGE-RLPQPP  234 (279)
T ss_pred             chhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH---HHHH---------------CCC-cCCCCc
Confidence            467999999988899999999999999999998 88888632211111   1111               111 111222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      .....+.+++..||+.+|.+||++.+++..|+.+...
T Consensus       235 ~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05109         235 ICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD  271 (279)
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence            3345678899999999999999999999999888654

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.47  E-value=1.6e-14  Score=116.19  Aligned_cols=93  Identities=15%  Similarity=0.083  Sum_probs=65.1

Q ss_pred             CCCCCcchhhHhhhc-----------CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhh
Q 047377           20 SKRPSMVDIVYALSK-----------SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEW   88 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~-----------~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (160)
                      .+++.||+||.+...           +++.+|||||+||++|+|+.|++||.. -...+..               +..+
T Consensus       522 vGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~-~~n~~aK---------------l~aI  585 (677)
T KOG0596|consen  522 VGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ-IINQIAK---------------LHAI  585 (677)
T ss_pred             cCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH-HHHHHHH---------------HHhh
Confidence            456899999998543           256899999999999999999999961 1111111               2234


Q ss_pred             hccccCCCCCCHH-HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           89 MDEILLQDSISME-GVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        89 ~d~~l~~~~~~~~-~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .+|.. .-++|.- ....++++|.+|+..||++||++.++++
T Consensus       586 ~~P~~-~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  586 TDPNH-EIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             cCCCc-cccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            44432 2233321 1123799999999999999999998876

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.47  E-value=4e-14  Score=105.82  Aligned_cols=92  Identities=10%  Similarity=0.021  Sum_probs=67.6

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|++||++..+.++.++||||||++++|+++ |+.||........   ...+.               ... ..+.+..
T Consensus       167 ~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~~~~~---------------~~~-~~~~~~~  227 (260)
T cd05067         167 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEV---IQNLE---------------RGY-RMPRPDN  227 (260)
T ss_pred             ccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHH---HHHHH---------------cCC-CCCCCCC
Confidence            57999999988889999999999999999998 9999863221111   11111               111 1122222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      ....+.+++.+|+..+|++||++.++...|+.
T Consensus       228 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         228 CPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            33467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.47  E-value=2.5e-14  Score=106.82  Aligned_cols=94  Identities=11%  Similarity=0.051  Sum_probs=68.2

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|++||....+.++.++||||||++++++++ |+.|+........   ...+.               ... ....+.
T Consensus       167 ~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~---~~~~~---------------~~~-~~~~~~  227 (261)
T cd05148         167 PYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEV---YDQIT---------------AGY-RMPCPA  227 (261)
T ss_pred             ceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHH---HHHHH---------------hCC-cCCCCC
Confidence            357999999988899999999999999999998 8889863221100   01110               111 112222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      .....+.+++.+||+.+|.+||++.++.+.|+.+
T Consensus       228 ~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         228 KCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence            3345678999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.47  E-value=1.9e-14  Score=107.66  Aligned_cols=93  Identities=13%  Similarity=0.130  Sum_probs=68.0

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|+|||+.....++.++||||||++++|+++ |+.|+.......   +...+.               ... ....+..
T Consensus       168 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~---------------~~~-~~~~~~~  228 (261)
T cd05068         168 IKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE---VLQQVD---------------QGY-RMPCPPG  228 (261)
T ss_pred             eeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHH---------------cCC-CCCCCCc
Confidence            36999999988899999999999999999999 998886322111   111111               111 1112223


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      ....+.+++.+|++.+|.+||++.++...|+.+
T Consensus       229 ~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         229 CPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             CCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence            345678899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.47  E-value=3.1e-14  Score=107.80  Aligned_cols=92  Identities=16%  Similarity=0.104  Sum_probs=66.6

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|+|||++..+.++.++||||||++++|+++ |..||......   .+...+.               ... ....+..
T Consensus       190 ~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~---~~~~~~~---------------~~~-~~~~~~~  250 (283)
T cd05090         190 IRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ---EVIEMVR---------------KRQ-LLPCSED  250 (283)
T ss_pred             ceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHH---------------cCC-cCCCCCC
Confidence            46999999988889999999999999999998 88888532211   1111111               111 1112222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      ....+..++.+||+.+|.+||++.+|.+.|.+
T Consensus       251 ~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         251 CPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             CCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            33466889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.46  E-value=2.6e-14  Score=106.78  Aligned_cols=95  Identities=11%  Similarity=0.077  Sum_probs=66.8

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhC-CCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISG-EKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|+|||......++.++||||||++++|+++| .+|+......  ........               ..  ....+.
T Consensus       165 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~--~~~~~~~~---------------~~--~~~~~~  225 (262)
T cd05058         165 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF--DITVYLLQ---------------GR--RLLQPE  225 (262)
T ss_pred             CccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHhc---------------CC--CCCCCC
Confidence            3579999999888999999999999999999995 5556422211  11011111               00  001111


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      ..+..+.+++..||+.+|.+||++.+|+..|+++.
T Consensus       226 ~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~  260 (262)
T cd05058         226 YCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF  260 (262)
T ss_pred             cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence            22346788999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.46  E-value=3.5e-14  Score=106.47  Aligned_cols=94  Identities=17%  Similarity=0.165  Sum_probs=68.2

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|++||......++.++||||||++++|+++ |..|+......   .....+.               ... ..+.+.
T Consensus       171 ~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~---~~~~~~~---------------~~~-~~~~~~  231 (266)
T cd05033         171 PIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ---DVIKAVE---------------DGY-RLPPPM  231 (266)
T ss_pred             CccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH---HHHHHHH---------------cCC-CCCCCC
Confidence            357999999988899999999999999999987 98888522111   1111111               000 111122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      .....+.+++.+||+.+|.+||++.+|++.|+++
T Consensus       232 ~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         232 DCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            3345678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.46  E-value=9.1e-14  Score=103.91  Aligned_cols=99  Identities=12%  Similarity=0.123  Sum_probs=71.3

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ...+.|+|||...+..++.++|+||||++++++++|+.|+.......... ...+.               ... ....+
T Consensus       167 ~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~---------------~~~-~~~~~  229 (267)
T cd08224         167 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL-CKKIE---------------KCD-YPPLP  229 (267)
T ss_pred             cCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHH-Hhhhh---------------cCC-CCCCC
Confidence            34567999999988889999999999999999999999985332211111 11111               111 11122


Q ss_pred             H-HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377          100 M-EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus       100 ~-~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      . .....+..++.+||..+|.+||++.+|++.|+.++
T Consensus       230 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         230 ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            2 33446788999999999999999999999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.46  E-value=4.4e-14  Score=106.37  Aligned_cols=93  Identities=11%  Similarity=0.069  Sum_probs=67.4

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +..|+|||....+.++.++||||||++++|+++ |..|+........   ...+.              +..  ....+.
T Consensus       184 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~---~~~~~--------------~~~--~~~~~~  244 (277)
T cd05032         184 PVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEV---LKFVI--------------DGG--HLDLPE  244 (277)
T ss_pred             cccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHH---HHHHh--------------cCC--CCCCCC
Confidence            357999999988899999999999999999998 8888853221111   11111              010  111222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      .....+.+++.+||+.+|.+||++.+++..|++
T Consensus       245 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (277)
T cd05032         245 NCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD  277 (277)
T ss_pred             CCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence            234567899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.46  E-value=5.6e-14  Score=112.92  Aligned_cols=91  Identities=14%  Similarity=0.054  Sum_probs=68.8

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +|-|||||+.....|..|+||||+||+.+||+.|.+||--+.  -...++.....|+            |.   ...+..
T Consensus       432 TPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~--PlrAlyLIa~ng~------------P~---lk~~~k  494 (550)
T KOG0578|consen  432 TPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN--PLRALYLIATNGT------------PK---LKNPEK  494 (550)
T ss_pred             CCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCC--hHHHHHHHhhcCC------------CC---cCCccc
Confidence            488999999999999999999999999999999999985211  1112112222111            22   244455


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ....+.++..+|+..|+.+|+++.++++
T Consensus       495 lS~~~kdFL~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  495 LSPELKDFLDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             cCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence            5667789999999999999999999986

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.46  E-value=2.4e-14  Score=109.31  Aligned_cols=96  Identities=13%  Similarity=0.035  Sum_probs=69.8

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|++||+.....++.++||||||++++|+++ |..||.......   +...+.               ... ....+..
T Consensus       182 ~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~---~~~~~~---------------~~~-~~~~~~~  242 (297)
T cd05089         182 VRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE---LYEKLP---------------QGY-RMEKPRN  242 (297)
T ss_pred             ccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHh---------------cCC-CCCCCCC
Confidence            36999999988889999999999999999997 999986322111   001110               111 1112222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      ....+.+++.+||+.+|.+||++.++++.|+.+...
T Consensus       243 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~  278 (297)
T cd05089         243 CDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA  278 (297)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            334668899999999999999999999999888764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.46  E-value=7.3e-14  Score=106.20  Aligned_cols=99  Identities=9%  Similarity=0.082  Sum_probs=66.4

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh--CCCCCCCCc-hhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS--GEKAIDEEG-KVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt--g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+.|+|||++..+.++.++||||||++++|+++  +..|+.... ...+........      ..      .... ....
T Consensus       195 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~------~~------~~~~-~~~~  261 (296)
T cd05051         195 PIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFR------DD------GRQI-YLPR  261 (296)
T ss_pred             CceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccc------cc------cccc-cCCC
Confidence            357999999988899999999999999999987  566664211 111111111110      00      0010 1111


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      +...+..+.+++.+|++.+|.+||++.+|++.|+.
T Consensus       262 ~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~  296 (296)
T cd05051         262 PPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR  296 (296)
T ss_pred             ccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence            22233567899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.46  E-value=2.6e-14  Score=108.17  Aligned_cols=92  Identities=14%  Similarity=0.101  Sum_probs=66.1

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+....++.++||||||++++|+++ |..||.......  .......               ..  ....+..
T Consensus       188 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~---------------~~--~~~~~~~  248 (280)
T cd05092         188 IRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE--AIECITQ---------------GR--ELERPRT  248 (280)
T ss_pred             ccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH--HHHHHHc---------------Cc--cCCCCCC
Confidence            57999999998999999999999999999998 888885222110  0001111               00  1111222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      ....+.+++.+||+.+|.+||++.+|...|++
T Consensus       249 ~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~  280 (280)
T cd05092         249 CPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA  280 (280)
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence            33456899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.45  E-value=2.9e-14  Score=107.60  Aligned_cols=93  Identities=12%  Similarity=0.092  Sum_probs=66.6

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|+|||++..+.++.++||||||++++|+++ |..|+......   .......              ....  ...+.
T Consensus       184 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~---~~~~~~~--------------~~~~--~~~~~  244 (277)
T cd05062         184 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE---QVLRFVM--------------EGGL--LDKPD  244 (277)
T ss_pred             CHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHH--------------cCCc--CCCCC
Confidence            357999999998899999999999999999998 67887532211   1111111              1110  11122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      .....+.+++.+|++.+|.+||++.+++..|++
T Consensus       245 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         245 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence            233567889999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.45  E-value=3.5e-14  Score=113.33  Aligned_cols=95  Identities=14%  Similarity=0.122  Sum_probs=69.1

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+..+.++.++||||||++++|+++ |..|+......  ......+.               ... ....+..
T Consensus       303 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~--~~~~~~~~---------------~~~-~~~~~~~  364 (400)
T cd05105         303 VKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD--STFYNKIK---------------SGY-RMAKPDH  364 (400)
T ss_pred             cceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh--HHHHHHHh---------------cCC-CCCCCcc
Confidence            57999999988899999999999999999997 88888622110  00011111               111 1122233


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      ....+.+++.+||+.+|++||++.+|.+.|+.+.
T Consensus       365 ~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~  398 (400)
T cd05105         365 ATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL  398 (400)
T ss_pred             CCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence            4456789999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.45  E-value=2.8e-14  Score=115.51  Aligned_cols=91  Identities=14%  Similarity=0.145  Sum_probs=68.0

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+++|.|+|||++.....+..+||||.||++|-++.|++||....   .......+.              ....   ..
T Consensus       178 lCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~---vkety~~Ik--------------~~~Y---~~  237 (592)
T KOG0575|consen  178 LCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT---VKETYNKIK--------------LNEY---SM  237 (592)
T ss_pred             ecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch---HHHHHHHHH--------------hcCc---cc
Confidence            377899999999998899999999999999999999999996321   111111111              1111   22


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      |........+|+...++++|.+||+..+|+.
T Consensus       238 P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  238 PSHLSAEAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             ccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            3334455578889999999999999999986

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.45  E-value=2.9e-14  Score=109.35  Aligned_cols=95  Identities=17%  Similarity=0.156  Sum_probs=68.2

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|+|||.+..+.++.++||||||++++|+++ |..|+.....  ........               +... ....+.
T Consensus       206 ~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~--~~~~~~~~---------------~~~~-~~~~~~  267 (302)
T cd05055         206 PVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV--DSKFYKLI---------------KEGY-RMAQPE  267 (302)
T ss_pred             ccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc--hHHHHHHH---------------HcCC-cCCCCC
Confidence            357999999998999999999999999999998 8998863221  01101111               1111 111112


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      .....+.+++.+|+..+|.+||++.+|+..|+++
T Consensus       268 ~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         268 HAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            2234678899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.45  E-value=6.5e-14  Score=104.79  Aligned_cols=92  Identities=15%  Similarity=0.072  Sum_probs=67.5

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|++||+...+.++.++||||||++++|+++ |..|+.........   ..+.               ... ....+..
T Consensus       167 ~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~---~~~~---------------~~~-~~~~~~~  227 (260)
T cd05069         167 IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVL---EQVE---------------RGY-RMPCPQG  227 (260)
T ss_pred             hhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH---HHHH---------------cCC-CCCCCcc
Confidence            57999999988899999999999999999999 88888632211100   1111               011 1122223


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      ....+.+++.+||..+|.+||++.+|++.|++
T Consensus       228 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         228 CPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             cCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            34567889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.44  E-value=4.2e-14  Score=108.47  Aligned_cols=96  Identities=13%  Similarity=0.086  Sum_probs=70.6

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+..+.++.++||||||++++|+++ |..|+.....   ..+...+.               ... ..+.+..
T Consensus       206 ~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~---~~~~~~~~---------------~~~-~~~~~~~  266 (307)
T cd05098         206 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---EELFKLLK---------------EGH-RMDKPSN  266 (307)
T ss_pred             cceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH---HHHHHHHH---------------cCC-CCCCCCc
Confidence            57999999988889999999999999999998 8888753221   11111111               111 1122233


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      ....+.+++.+||..+|.+||++.+|+..|+.+...
T Consensus       267 ~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~  302 (307)
T cd05098         267 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL  302 (307)
T ss_pred             CCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence            345678899999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.44  E-value=4.1e-14  Score=105.59  Aligned_cols=90  Identities=16%  Similarity=0.168  Sum_probs=64.5

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|+|||......++.++||||||++++|+++ |+.||......  ........       .       ...   ..+..
T Consensus       165 ~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~--~~~~~i~~-------~-------~~~---~~~~~  225 (256)
T cd05114         165 VKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY--EVVEMISR-------G-------FRL---YRPKL  225 (256)
T ss_pred             hhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHC-------C-------CCC---CCCCC
Confidence            46999999988889999999999999999999 88898633211  11111111       0       000   11111


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAV  131 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L  131 (160)
                      ....+..++.+||+.+|.+||++.++++.|
T Consensus       226 ~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         226 ASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             CCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            234578999999999999999999999877

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.44  E-value=5.2e-14  Score=105.68  Aligned_cols=94  Identities=12%  Similarity=0.120  Sum_probs=68.2

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|++||+.....++.++||||||++++|+++ |..||......   .....+.      ..       ..   ...+.
T Consensus       177 ~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~~~~------~~-------~~---~~~~~  237 (272)
T cd05075         177 PVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS---EIYDYLR------QG-------NR---LKQPP  237 (272)
T ss_pred             CcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHH------cC-------CC---CCCCC
Confidence            457999999998899999999999999999998 78888632211   1112221      00       00   01112


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      .....+.+++.+||+.+|++||++.+|++.|+++
T Consensus       238 ~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         238 DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            2334578999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.44  E-value=1.2e-13  Score=105.64  Aligned_cols=98  Identities=12%  Similarity=0.058  Sum_probs=65.4

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh--CCCCCCCCc-hhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS--GEKAIDEEG-KVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt--g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+.|+|||.+..+.++.++||||||++++|+++  +..|+.... ......+...+.      ...  .....     ..
T Consensus       203 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~------~~~--~~~~~-----~~  269 (304)
T cd05096         203 PIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFR------DQG--RQVYL-----FR  269 (304)
T ss_pred             CccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhh------hcc--ccccc-----cC
Confidence            457999999998999999999999999999987  455664211 111111111111      000  00000     11


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVS  132 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~  132 (160)
                      +..++..+.+++.+||+.+|.+||++.+|++.|+
T Consensus       270 ~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         270 PPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            1223456789999999999999999999998886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.44  E-value=6.3e-14  Score=104.00  Aligned_cols=92  Identities=11%  Similarity=-0.001  Sum_probs=66.9

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|+|||+...+.++.++||||||++++++++ |..||........   ...+.               ... ....+.
T Consensus       157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~---~~~~~---------------~~~-~~~~~~  217 (250)
T cd05085         157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA---REQVE---------------KGY-RMSCPQ  217 (250)
T ss_pred             cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH---HHHHH---------------cCC-CCCCCC
Confidence            356999999988899999999999999999998 8989863321111   11111               010 111222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVS  132 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~  132 (160)
                      .....+.+++.+|+..+|.+||++.++++.|.
T Consensus       218 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         218 KCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            23456788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.44  E-value=8e-14  Score=103.59  Aligned_cols=91  Identities=15%  Similarity=0.166  Sum_probs=66.1

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +.+.|+|||+...+.++.++|+||||++++++++|+.|+.........  .....               ..  ....+.
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~~~---------------~~--~~~~~~  223 (256)
T cd08529         163 GTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALI--LKIIR---------------GV--FPPVSQ  223 (256)
T ss_pred             cCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHc---------------CC--CCCCcc
Confidence            457899999999989999999999999999999999998633311100  11111               00  111222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .....+.+++.+||+.+|++||++.++++.
T Consensus       224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         224 MYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             ccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            334567899999999999999999998863

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.43  E-value=8.2e-14  Score=113.00  Aligned_cols=99  Identities=11%  Similarity=0.060  Sum_probs=70.7

Q ss_pred             CCcchhhHhhh---cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           23 PSMVDIVYALS---KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        23 ~~y~aPE~~~~---~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ..|||||.+.-   ..|++.|||||||+|+|||++|.-||..+....+.+   .+.      .    ..+-+++  ...-
T Consensus       554 ilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIif---mVG------r----G~l~pd~--s~~~  618 (678)
T KOG0193|consen  554 LLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIF---MVG------R----GYLMPDL--SKIR  618 (678)
T ss_pred             hhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEE---Eec------c----cccCccc--hhhh
Confidence            47999999874   468999999999999999999999996221100000   000      0    0001111  1222


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ..+.+.+.+|+..||..++++||.|.+|+..|+.+..
T Consensus       619 s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  619 SNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             ccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence            3667888999999999999999999999998887766

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.43  E-value=3e-14  Score=105.97  Aligned_cols=91  Identities=11%  Similarity=0.039  Sum_probs=66.5

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|+|||.+..+.++.++||||||++++|+++ |..|+......   .....+               .... ....+..
T Consensus       160 ~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~---~~~~~~---------------~~~~-~~~~~~~  220 (252)
T cd05084         160 VKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ---QTREAI---------------EQGV-RLPCPEL  220 (252)
T ss_pred             eeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH---HHHHHH---------------HcCC-CCCCccc
Confidence            35999999988899999999999999999997 88887521110   001111               1111 1223333


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVS  132 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~  132 (160)
                      ....+.+++.+|++.+|.+||++.+|.+.|+
T Consensus       221 ~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         221 CPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            4457788999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.43  E-value=5.3e-14  Score=107.69  Aligned_cols=95  Identities=13%  Similarity=0.093  Sum_probs=69.5

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||++..+.++.++||||||++++|+++ |..|+.....   ..+...+.               ... ....+..
T Consensus       203 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~---------------~~~-~~~~~~~  263 (304)
T cd05101         203 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV---EELFKLLK---------------EGH-RMDKPAN  263 (304)
T ss_pred             ceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH---HHHHHHHH---------------cCC-cCCCCCC
Confidence            57999999988889999999999999999998 7777753221   11111221               000 1112223


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      +...+..++.+||+.+|.+||++.+|++.|+++..
T Consensus       264 ~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~  298 (304)
T cd05101         264 CTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT  298 (304)
T ss_pred             CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence            44567889999999999999999999999998854

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.43  E-value=1e-13  Score=103.94  Aligned_cols=93  Identities=15%  Similarity=0.090  Sum_probs=68.3

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|++||+...+.++.++||||||++++|+++ |..||......   .+...+.               ... ....+..
T Consensus       167 ~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~---~~~~~~~---------------~~~-~~~~~~~  227 (262)
T cd05071         167 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EVLDQVE---------------RGY-RMPCPPE  227 (262)
T ss_pred             ceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH---HHHHHHh---------------cCC-CCCCccc
Confidence            46999999988899999999999999999999 78888532211   1011111               011 1122234


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      ....+.+++.+|++.+|.+||++.++++.|+..
T Consensus       228 ~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         228 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             cCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence            456678999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.43  E-value=1.2e-13  Score=107.23  Aligned_cols=95  Identities=14%  Similarity=0.110  Sum_probs=69.9

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|+|||.+....++.++||||||++++|+++ |..|+.....   ......+.               ... ....+..
T Consensus       200 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~~~~~~~---------------~~~-~~~~~~~  260 (334)
T cd05100         200 VKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV---EELFKLLK---------------EGH-RMDKPAN  260 (334)
T ss_pred             ceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHH---------------cCC-CCCCCCC
Confidence            46999999998899999999999999999998 7888763221   11111111               011 1122223


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ....+..++.+||+.+|.+||++.+++..|+++..
T Consensus       261 ~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         261 CTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             CCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence            34567889999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.43  E-value=1e-13  Score=106.28  Aligned_cols=96  Identities=13%  Similarity=0.062  Sum_probs=69.0

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||+.....++.++||||||++++|+++ |..||........   .....               ... ....+..
T Consensus       187 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~---~~~~~---------------~~~-~~~~~~~  247 (303)
T cd05088         187 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL---YEKLP---------------QGY-RLEKPLN  247 (303)
T ss_pred             ccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHH---HHHHh---------------cCC-cCCCCCC
Confidence            46999999988889999999999999999998 9999853221110   01110               011 1111222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      ....+.+++.+||+.+|.+||++.+++..|+.+...
T Consensus       248 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~  283 (303)
T cd05088         248 CDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  283 (303)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            234568899999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.42  E-value=2.4e-13  Score=102.52  Aligned_cols=108  Identities=13%  Similarity=0.060  Sum_probs=69.6

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEG  102 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  102 (160)
                      ..|++||......++.++||||||++++|+++|..|+..........+.. ..  .........+.+.... ....+..+
T Consensus       176 ~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~-~~~~~~~~  251 (284)
T cd05038         176 IFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGI-AQ--GQMIVTRLLELLKEGE-RLPRPPSC  251 (284)
T ss_pred             ccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccc-cc--ccccHHHHHHHHHcCC-cCCCCccC
Confidence            45999999988899999999999999999999998875221111000000 00  0000000111111111 11222333


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          103 VMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       103 ~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      ...+.+++.+||+.+|.+||++.+|++.|+++
T Consensus       252 ~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         252 PDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             CHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            45678999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.42  E-value=8.3e-14  Score=107.20  Aligned_cols=96  Identities=14%  Similarity=0.116  Sum_probs=69.9

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+..+.++.++||||||++++|+++ |..|+.....   ..+...+.               ... ....+..
T Consensus       200 ~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~---~~~~~~~~---------------~~~-~~~~~~~  260 (314)
T cd05099         200 VKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV---EELFKLLR---------------EGH-RMDKPSN  260 (314)
T ss_pred             ccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHH---------------cCC-CCCCCCC
Confidence            46999999988889999999999999999998 8888753211   11111111               000 1122223


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      +...+.+++.+||..+|++||++.+++..|+++...
T Consensus       261 ~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~  296 (314)
T cd05099         261 CTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA  296 (314)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence            334667899999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.42  E-value=9.4e-14  Score=104.32  Aligned_cols=92  Identities=17%  Similarity=0.175  Sum_probs=66.5

Q ss_pred             CcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHHH
Q 047377           24 SMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEG  102 (160)
Q Consensus        24 ~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  102 (160)
                      .|++||++..+.++.++||||||++++|+++ |..|+......   .....+.               ... ....+..+
T Consensus       176 ~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~---~~~~~i~---------------~~~-~~~~~~~~  236 (269)
T cd05065         176 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVINAIE---------------QDY-RLPPPMDC  236 (269)
T ss_pred             eecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---HHHHHHH---------------cCC-cCCCcccC
Confidence            5999999998899999999999999999886 99998632211   1111111               000 11112233


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          103 VMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       103 ~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      +..+.+++..||+.+|.+||++.+|+..|+++
T Consensus       237 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         237 PTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            34568899999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.42  E-value=8.5e-14  Score=103.71  Aligned_cols=94  Identities=10%  Similarity=0.054  Sum_probs=67.2

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ...+|++||++....++.++||||||++++|+++ |..|+.........   ..+.      .        ... ....+
T Consensus       162 ~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~---~~~~------~--------~~~-~~~~~  223 (257)
T cd05040         162 VPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQIL---KKID------K--------EGE-RLERP  223 (257)
T ss_pred             CCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHH---HHHH------h--------cCC-cCCCC
Confidence            3468999999988899999999999999999998 99998522211111   1110      0        000 11112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVS  132 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~  132 (160)
                      ...+..+.+++..|++.+|++||++.+|++.|.
T Consensus       224 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         224 EACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            223456788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.42  E-value=1.4e-13  Score=103.27  Aligned_cols=94  Identities=12%  Similarity=0.056  Sum_probs=66.9

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ....|++||....+.++.++|+||||++++|+++|+.|+..........  ....               ... ......
T Consensus       175 ~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~--~~~~---------------~~~-~~~~~~  236 (269)
T cd08528         175 GTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLAT--KIVE---------------AVY-EPLPEG  236 (269)
T ss_pred             CcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHH--HHhh---------------ccC-CcCCcc
Confidence            4568999999998889999999999999999999999986332211111  1111               110 000011


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVS  132 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~  132 (160)
                      .....+.+++.+||+.+|.+||++.+|..+++
T Consensus       237 ~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         237 MYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             cCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            12345688999999999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.42  E-value=9e-14  Score=103.22  Aligned_cols=92  Identities=13%  Similarity=0.044  Sum_probs=66.7

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|++||.+..+.++.++|+||||++++|+++ |..|+.........   ..+.               ... ....+..
T Consensus       159 ~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~---~~~~---------------~~~-~~~~~~~  219 (251)
T cd05041         159 IKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTR---ERIE---------------SGY-RMPAPQL  219 (251)
T ss_pred             eccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHH---HHHh---------------cCC-CCCCCcc
Confidence            46999999988899999999999999999998 78887532211111   1111               111 1122233


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      ....+.+++.+|+..+|.+||++.+|++.|+.
T Consensus       220 ~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~  251 (251)
T cd05041         220 CPEEIYRLMLQCWAYDPENRPSFSEIYNELQI  251 (251)
T ss_pred             CCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence            34577899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.42  E-value=6e-14  Score=104.49  Aligned_cols=91  Identities=11%  Similarity=0.088  Sum_probs=65.0

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      .+|+|||....+.++.++||||||++++|+++ |..|+.........   ..+.      ..         . ....+..
T Consensus       165 ~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~---~~~~------~~---------~-~~~~~~~  225 (256)
T cd05112         165 VKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVV---ETIN------AG---------F-RLYKPRL  225 (256)
T ss_pred             hhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHH---HHHh------CC---------C-CCCCCCC
Confidence            47999999988899999999999999999998 89988632211111   1111      00         0 0001111


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVS  132 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~  132 (160)
                      ....+.+++.+||+.+|++||++.++++.|+
T Consensus       226 ~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         226 ASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             CCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence            2356788999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.41  E-value=1.8e-13  Score=105.30  Aligned_cols=98  Identities=15%  Similarity=0.094  Sum_probs=67.9

Q ss_pred             CCCCCCcchhhHhhhcCC-cccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           19 PSKRPSMVDIVYALSKSD-DLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~-s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..++|.|||||++..+.. ..++||||+||+++||+||+.|+... ......+.....              ...  .+.
T Consensus       181 ~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~~~~~~~~ig~--------------~~~--~P~  243 (313)
T KOG0198|consen  181 VQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FEEAEALLLIGR--------------EDS--LPE  243 (313)
T ss_pred             ccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cchHHHHHHHhc--------------cCC--CCC
Confidence            455689999999986543 35999999999999999999998631 001111111111              011  124


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      +|........+.+..|+..+|.+||++.+++..---
T Consensus       244 ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~  279 (313)
T KOG0198|consen  244 IPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL  279 (313)
T ss_pred             CCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence            444455566788899999999999999999886543

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.41  E-value=9e-14  Score=105.48  Aligned_cols=92  Identities=16%  Similarity=0.110  Sum_probs=66.0

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+..+.++.++||||||++++|+++ |..|+.....   ..+...+.              +...  ...+..
T Consensus       196 ~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~---~~~~~~~~--------------~~~~--~~~~~~  256 (288)
T cd05050         196 IRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH---EEVIYYVR--------------DGNV--LSCPDN  256 (288)
T ss_pred             hhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHh--------------cCCC--CCCCCC
Confidence            46999999988899999999999999999997 7778742211   11111111              0111  111222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      ....+.+++.+|++.+|.+||++.|+++.|++
T Consensus       257 ~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         257 CPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             CCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            34567889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.41  E-value=9.2e-14  Score=103.75  Aligned_cols=90  Identities=11%  Similarity=0.038  Sum_probs=65.0

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|+|||.+..+.++.++|+||||++++|+++ |..|+........   ...+.               ... ....+..
T Consensus       165 ~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~---~~~~~---------------~~~-~~~~~~~  225 (256)
T cd05059         165 VKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV---VESVS---------------AGY-RLYRPKL  225 (256)
T ss_pred             ccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH---HHHHH---------------cCC-cCCCCCC
Confidence            36999999998899999999999999999998 7888863221110   01111               000 1111222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAV  131 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L  131 (160)
                      ....+..++.+||..+|++||++.++++.|
T Consensus       226 ~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         226 APTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             CCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            345678999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.41  E-value=1.8e-13  Score=103.76  Aligned_cols=108  Identities=12%  Similarity=0.097  Sum_probs=67.3

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEG  102 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  102 (160)
                      ..|+|||+..++.++.++||||||++++|+++++.|............ ....+ . .........+.... ..+.+...
T Consensus       176 ~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~-~~~~~-~-~~~~~~~~~~~~~~-~~~~~~~~  251 (284)
T cd05079         176 VFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMI-GPTHG-Q-MTVTRLVRVLEEGK-RLPRPPNC  251 (284)
T ss_pred             ccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhc-ccccc-c-ccHHHHHHHHHcCc-cCCCCCCC
Confidence            469999999888899999999999999999998766431111000000 00000 0 00000001111111 11122233


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          103 VMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       103 ~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      ...+.+++.+|++.+|.+||++.++++.|+.+
T Consensus       252 ~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         252 PEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            45778999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.41  E-value=1.6e-13  Score=102.66  Aligned_cols=93  Identities=13%  Similarity=0.053  Sum_probs=67.1

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|++||++..+.++.++|+||||++++++++ |..||.........   ..+.               ... ..+.+..
T Consensus       167 ~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~---~~~~---------------~~~-~~~~~~~  227 (260)
T cd05073         167 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI---RALE---------------RGY-RMPRPEN  227 (260)
T ss_pred             ccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHH---HHHh---------------CCC-CCCCccc
Confidence            46999999988889999999999999999998 89898632211111   1111               000 1111122


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      ....+.+++.+|++.+|.+||++.++...|+.+
T Consensus       228 ~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~  260 (260)
T cd05073         228 CPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF  260 (260)
T ss_pred             CCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence            334678899999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.41  E-value=4.2e-13  Score=100.67  Aligned_cols=94  Identities=14%  Similarity=0.105  Sum_probs=68.5

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC-
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS-   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~-   99 (160)
                      ++|-||+||.+....|+.||||||+||+++||..-++||....  +... ...+.               ..- ..++| 
T Consensus       190 GTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n--~~~L-~~KI~---------------qgd-~~~~p~  250 (375)
T KOG0591|consen  190 GTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN--LLSL-CKKIE---------------QGD-YPPLPD  250 (375)
T ss_pred             CCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc--HHHH-HHHHH---------------cCC-CCCCcH
Confidence            4688999999999999999999999999999999999997542  2221 12221               110 22344 


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      ......+..|+..|+..||..||+...++..++.
T Consensus       251 ~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  251 EHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             HHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence            3456677888999999999999985445444443

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.41  E-value=5e-14  Score=112.47  Aligned_cols=96  Identities=13%  Similarity=0.060  Sum_probs=69.4

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|++||.+..+.++.++||||||++++|+++ |..|+.......  .....+               .... ....+.
T Consensus       304 ~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~--~~~~~~---------------~~~~-~~~~p~  365 (401)
T cd05107         304 PLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE--QFYNAI---------------KRGY-RMAKPA  365 (401)
T ss_pred             CCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH--HHHHHH---------------HcCC-CCCCCC
Confidence            357999999988889999999999999999998 888886321100  000111               1111 112222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      .....+.+++.+||..+|.+||++.+|+..|+++.
T Consensus       366 ~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         366 HASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            33456789999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.41  E-value=2.8e-13  Score=100.92  Aligned_cols=91  Identities=12%  Similarity=0.030  Sum_probs=65.3

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +.+.|+|||......++.++|+||||++++++++|..||.........  .....               ..  ....+.
T Consensus       162 ~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~--~~~~~---------------~~--~~~~~~  222 (255)
T cd08219         162 GTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLI--LKVCQ---------------GS--YKPLPS  222 (255)
T ss_pred             CCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHH--HHHhc---------------CC--CCCCCc
Confidence            456799999998888999999999999999999999999733211111  11111               00  111222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .....+.+++.+||+.+|.+||++.+|+..
T Consensus       223 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         223 HYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             ccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            233456788999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.41  E-value=6.7e-14  Score=104.68  Aligned_cols=91  Identities=15%  Similarity=0.158  Sum_probs=62.5

Q ss_pred             CCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCC-CCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           21 KRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGE-KAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        21 ~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .++.|+|||++... .++.++||||||++++|+++|. .|+.........   ....               ..   ...
T Consensus       166 ~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~---~~~~---------------~~---~~~  224 (258)
T cd05078         166 ERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL---QFYE---------------DR---HQL  224 (258)
T ss_pred             ccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH---HHHH---------------cc---ccC
Confidence            44679999998764 5789999999999999999985 554321110000   1110               11   112


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVS  132 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~  132 (160)
                      +......+.+++.+||+.+|++||++.+|++.|+
T Consensus       225 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         225 PAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            2222245789999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.40  E-value=9.2e-14  Score=103.91  Aligned_cols=91  Identities=12%  Similarity=0.104  Sum_probs=64.9

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|++||....+.++.++||||||++++|+++ |..|+..........  ....               . . ....+..
T Consensus       165 ~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~--~~~~---------------~-~-~~~~~~~  225 (256)
T cd05113         165 VRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVE--KVSQ---------------G-L-RLYRPHL  225 (256)
T ss_pred             hhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHH--HHhc---------------C-C-CCCCCCC
Confidence            46999999988889999999999999999998 898886322111100  1111               0 0 0011111


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVS  132 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~  132 (160)
                      ....+.+++.+||+.+|.+||++.+|+..|+
T Consensus       226 ~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         226 ASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             CCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            2356788999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.40  E-value=1.9e-13  Score=101.45  Aligned_cols=93  Identities=12%  Similarity=0.064  Sum_probs=67.8

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ..+.|+|||......++.++||||+|++++|+++ |..|+......   .+...+.              + .. ....+
T Consensus       169 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~~~--------------~-~~-~~~~~  229 (262)
T cd00192         169 LPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE---EVLEYLR--------------K-GY-RLPKP  229 (262)
T ss_pred             cCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHH--------------c-CC-CCCCC
Confidence            4568999999988899999999999999999998 68888633211   1111111              0 00 11223


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVS  132 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~  132 (160)
                      ......+..++.+|+..+|.+||++.+++..|+
T Consensus       230 ~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         230 EYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             ccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            333456789999999999999999999998874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.40  E-value=8.8e-14  Score=108.57  Aligned_cols=97  Identities=13%  Similarity=0.110  Sum_probs=68.5

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|+|||......++.++||||||++++|+++ |..|+......  ......+.               ... ....+.
T Consensus       244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~---------------~~~-~~~~~~  305 (343)
T cd05103         244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEFCRRLK---------------EGT-RMRAPD  305 (343)
T ss_pred             CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc--HHHHHHHh---------------ccC-CCCCCC
Confidence            356999999988899999999999999999996 88888632110  01111111               000 001111


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .....+.+++..||+.+|.+||++.+|++.|+.+.+
T Consensus       306 ~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         306 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            122356888999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.40  E-value=1.2e-13  Score=105.86  Aligned_cols=97  Identities=13%  Similarity=0.149  Sum_probs=69.5

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ...|++||++....++.++||||||++++|+++ |..|+.....   ..+...+.               ... ....+.
T Consensus       174 ~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~---~~~~~~~~---------------~~~-~~~~~~  234 (303)
T cd05110         174 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT---REIPDLLE---------------KGE-RLPQPP  234 (303)
T ss_pred             ccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHH---------------CCC-CCCCCC
Confidence            357999999988889999999999999999997 8888853221   11112221               000 011111


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      .+...+..++..||..+|.+||++.+++..|+.+...
T Consensus       235 ~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~  271 (303)
T cd05110         235 ICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD  271 (303)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            2234567889999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.40  E-value=1.8e-13  Score=112.04  Aligned_cols=92  Identities=18%  Similarity=0.143  Sum_probs=66.9

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+..+.++.++||||||++++|+++|+.||.......  .+.....               ..  ....+
T Consensus       206 ~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~--~~~~~~~---------------~~--~~~~~  266 (496)
T PTZ00283        206 CGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE--VMHKTLA---------------GR--YDPLP  266 (496)
T ss_pred             cCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHhc---------------CC--CCCCC
Confidence            45678999999999899999999999999999999999997432111  1111111               00  11122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ......+..++..||+.+|.+||++.+++..
T Consensus       267 ~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        267 PSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             CCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            2233567889999999999999999998763

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.40  E-value=3e-13  Score=100.64  Aligned_cols=92  Identities=17%  Similarity=0.140  Sum_probs=66.6

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||....+.++.++|+||+|++++++++|+.|+.........  .....               ..+  ...+
T Consensus       163 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~--~~~~~---------------~~~--~~~~  223 (257)
T cd08223         163 IGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLV--YRIIE---------------GKL--PPMP  223 (257)
T ss_pred             cCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH--HHHHh---------------cCC--CCCc
Confidence            3467899999999889999999999999999999999998633211111  11111               111  1122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ......+.+++.+|++.+|.+||++.+++..
T Consensus       224 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         224 KDYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             cccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            2334567899999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.40  E-value=1.4e-13  Score=102.62  Aligned_cols=92  Identities=15%  Similarity=0.092  Sum_probs=66.6

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|++||++..+.++.++|+||||++++|+++ |+.|+.......   ....+.               ... ....+..
T Consensus       161 ~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~---------------~~~-~~~~~~~  221 (254)
T cd05083         161 VKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE---VKECVE---------------KGY-RMEPPEG  221 (254)
T ss_pred             ceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH---HHHHHh---------------CCC-CCCCCCc
Confidence            47999999988899999999999999999997 899986332111   111111               010 1111122


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      ....+.+++.+||+.+|.+||++.+|+..|++
T Consensus       222 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         222 CPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            23566789999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.40  E-value=3.4e-13  Score=102.87  Aligned_cols=98  Identities=9%  Similarity=0.078  Sum_probs=65.6

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh--CCCCCCCCc-hhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS--GEKAIDEEG-KVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt--g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      +.|++||....+.++.++||||||++++|+++  |..|+.... ............      ...      ... ..+.+
T Consensus       196 ~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~------~~~------~~~-~~~~~  262 (296)
T cd05095         196 IRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFR------DQG------RQV-YLPKP  262 (296)
T ss_pred             cccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHh------hcc------ccc-cCCCC
Confidence            57999999988999999999999999999998  667765221 111111111110      000      000 00111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      ..+...+.+++..||+.+|.+||++.+|++.|+.
T Consensus       263 ~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         263 ALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE  296 (296)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            2233567899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.40  E-value=1.5e-13  Score=104.03  Aligned_cols=106  Identities=13%  Similarity=0.074  Sum_probs=67.3

Q ss_pred             CcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCcc--ccccchhhhhccccCCCCCCHH
Q 047377           24 SMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEG--RKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        24 ~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      .|+|||+...+.++.++||||||++++|+++|..+.........    ........  .....+.+.+.... ....+..
T Consensus       176 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  250 (284)
T cd05081         176 FWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFM----RMMGNDKQGQMIVYHLIELLKNNG-RLPAPPG  250 (284)
T ss_pred             EeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhh----hhcccccccccchHHHHHHHhcCC-cCCCCCC
Confidence            49999999888899999999999999999998766532111111    10100000  00000111111111 1111223


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      ....+.+++.+||..+|++||++.+|+..|+.+
T Consensus       251 ~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         251 CPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            345678999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.39  E-value=2.2e-13  Score=102.34  Aligned_cols=95  Identities=15%  Similarity=0.041  Sum_probs=68.8

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+....++.++||||||++++|+++ |..||..........  ....      .        ..   ...+..
T Consensus       172 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~--~~~~------~--------~~---~~~~~~  232 (270)
T cd05056         172 IKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIG--RIEN------G--------ER---LPMPPN  232 (270)
T ss_pred             ccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH--HHHc------C--------Cc---CCCCCC
Confidence            57999999988889999999999999999986 999986332111000  1111      0        00   011222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ....+..++.+|+..+|.+||++.+++..|+++..
T Consensus       233 ~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~  267 (270)
T cd05056         233 CPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ  267 (270)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            33467889999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.39  E-value=1.3e-13  Score=102.80  Aligned_cols=93  Identities=14%  Similarity=0.049  Sum_probs=67.3

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|++||++..+.++.++||||||++++|+++ |..|+......   .+...+.               ... ....+..
T Consensus       163 ~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~~~---------------~~~-~~~~~~~  223 (256)
T cd05039         163 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVPHVE---------------KGY-RMEAPEG  223 (256)
T ss_pred             ccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHh---------------cCC-CCCCccC
Confidence            46999999988899999999999999999997 99888633211   1111111               000 1111222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      .+..+.+++.+|+..+|.+||++.+++..|+++
T Consensus       224 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         224 CPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             CCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence            235678899999999999999999999999764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.39  E-value=2.7e-13  Score=106.80  Aligned_cols=98  Identities=20%  Similarity=0.249  Sum_probs=64.0

Q ss_pred             CCCCCcchhhHhhh--cCCcccCccCCCeeehhhhhhCCCCCCC--CchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           20 SKRPSMVDIVYALS--KSDDLLSDISDDALSSSQLISGEKAIDE--EGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        20 ~~~~~y~aPE~~~~--~~~s~ksDv~s~Gvvl~elltg~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      -++|.|||||.+..  ..|+.|+|||||||+..|+.+|..||..  .-..+.    ..++       +......-..+ .
T Consensus       191 vgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl----~tLq-------n~pp~~~t~~~-~  258 (516)
T KOG0582|consen  191 VGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLL----LTLQ-------NDPPTLLTSGL-D  258 (516)
T ss_pred             cCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHH----HHhc-------CCCCCcccccC-C
Confidence            45689999999543  4699999999999999999999999962  111111    1221       11000000011 1


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .+-.....+.+.+++..|+++||.+||+.++++.
T Consensus       259 ~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  259 KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence            1111123446788888999999999999999875

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.38  E-value=3e-13  Score=111.61  Aligned_cols=87  Identities=13%  Similarity=0.047  Sum_probs=69.0

Q ss_pred             CcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHHH
Q 047377           24 SMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEG  102 (160)
Q Consensus        24 ~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  102 (160)
                      .|-|||.+.++.|+-+||||+|||++|||++ |..|+..-....+.   +.               +|.+- ...-|..|
T Consensus       280 AWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL---~~---------------iD~~e-rLpRPk~c  340 (1039)
T KOG0199|consen  280 AWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQIL---KN---------------IDAGE-RLPRPKYC  340 (1039)
T ss_pred             cccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHH---Hh---------------ccccc-cCCCCCCC
Confidence            7999999999999999999999999999997 88898643322222   12               22221 33556678


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          103 VMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       103 ~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .+.++.++..||...|.+||+|..|.+
T Consensus       341 sedIY~imk~cWah~paDRptFsair~  367 (1039)
T KOG0199|consen  341 SEDIYQIMKNCWAHNPADRPTFSAIRE  367 (1039)
T ss_pred             hHHHHHHHHHhccCCccccccHHHHHH
Confidence            889999999999999999999999974

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.38  E-value=2.6e-13  Score=103.14  Aligned_cols=92  Identities=13%  Similarity=0.111  Sum_probs=64.4

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhH-HHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVL-WAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      +.+.|+|||.+....++.++|||||||+++|+++|+.||....... ...+...+.              ..   ...++
T Consensus       163 g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~--------------~~---~~~~~  225 (285)
T cd05631         163 GTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVK--------------ED---QEEYS  225 (285)
T ss_pred             CCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhh--------------cc---cccCC
Confidence            4578999999999999999999999999999999999997322111 111111110              01   11222


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPS-----MVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs-----~~ev~~  129 (160)
                      ......+..++.+||..+|.+||+     +.++++
T Consensus       226 ~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         226 EKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             ccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence            233346688999999999999997     666665

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.38  E-value=1.7e-13  Score=101.78  Aligned_cols=92  Identities=15%  Similarity=0.164  Sum_probs=64.1

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ..+.|++||++.+..++.++||||||++++++++|+.|+......  ... ....           ....+.+   ..+.
T Consensus       161 ~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~--~~~-~~~~-----------~~~~~~~---~~~~  223 (256)
T cd06612         161 GTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM--RAI-FMIP-----------NKPPPTL---SDPE  223 (256)
T ss_pred             CCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh--hhh-hhhc-----------cCCCCCC---Cchh
Confidence            346899999998889999999999999999999999998632110  000 0000           0000111   1222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+.+++.+||+.+|.+||++.+|+.
T Consensus       224 ~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         224 KWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             hcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            23346788999999999999999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.38  E-value=3.9e-13  Score=101.53  Aligned_cols=91  Identities=19%  Similarity=0.155  Sum_probs=66.8

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ....|+|||...+..++.++|+||||++++|+++|..|+.........                  ..+.... ....+.
T Consensus       163 ~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~------------------~~~~~~~-~~~~~~  223 (277)
T cd06640         163 GTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL------------------FLIPKNN-PPTLTG  223 (277)
T ss_pred             CcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh------------------hhhhcCC-CCCCch
Confidence            345799999998888999999999999999999999998632210000                  0111111 223334


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .....+.+++.+||+.+|.+||++.+++..
T Consensus       224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         224 EFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             hhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            455678899999999999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.38  E-value=2.7e-13  Score=102.13  Aligned_cols=91  Identities=18%  Similarity=0.191  Sum_probs=63.9

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ..+.|++||++....++.++|+||||++++++++|..|+.........   ..+.           ....+.+ ...   
T Consensus       160 ~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~---~~~~-----------~~~~~~~-~~~---  221 (274)
T cd06609         160 GTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVL---FLIP-----------KNNPPSL-EGN---  221 (274)
T ss_pred             CCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHH---HHhh-----------hcCCCCC-ccc---
Confidence            346799999999888999999999999999999999998632211100   1111           0011111 111   


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+.+++.+||..+|.+||++++++.
T Consensus       222 ~~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         222 KFSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            02345678899999999999999999976

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.38  E-value=1.8e-13  Score=103.24  Aligned_cols=90  Identities=17%  Similarity=0.174  Sum_probs=64.5

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ....|++||++....++.++|+||||++++|+++|+.|+.........   ..+               .... ....+.
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~---~~~---------------~~~~-~~~~~~  223 (277)
T cd06642         163 GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL---FLI---------------PKNS-PPTLEG  223 (277)
T ss_pred             CcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH---hhh---------------hcCC-CCCCCc
Confidence            346799999998888999999999999999999999998522110000   011               0111 111222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+.+++.+||+.+|.+||++.+|+.
T Consensus       224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         224 QYSKPFKEFVEACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             ccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            33456788999999999999999999987

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.38  E-value=3.3e-13  Score=102.29  Aligned_cols=96  Identities=17%  Similarity=0.156  Sum_probs=65.9

Q ss_pred             CCCCcchhhHhhhc---CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           21 KRPSMVDIVYALSK---SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        21 ~~~~y~aPE~~~~~---~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      .++.|+|||.+...   .++.++||||||++++|+++|+.||.... .....+.....            ...+.+ ...
T Consensus       169 ~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-~~~~~~~~~~~------------~~~~~~-~~~  234 (288)
T cd06616         169 GCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-SVFDQLTQVVK------------GDPPIL-SNS  234 (288)
T ss_pred             CccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-hHHHHHhhhcC------------CCCCcC-CCc
Confidence            45689999998776   68899999999999999999999986322 11111111111            001122 112


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .+......+.+++.+||+.+|.+||++.+|+..
T Consensus       235 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         235 EEREFSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            222234567899999999999999999998763

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.38  E-value=3.5e-13  Score=101.20  Aligned_cols=93  Identities=11%  Similarity=0.085  Sum_probs=67.6

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|++||....+.++.++||||||++++|+++ |..|+........   ...+..     .        ..+   ..+..
T Consensus       179 ~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~---~~~~~~-----~--------~~~---~~~~~  239 (273)
T cd05074         179 VKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEI---YNYLIK-----G--------NRL---KQPPD  239 (273)
T ss_pred             hhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHH---HHHHHc-----C--------CcC---CCCCC
Confidence            57999999988889999999999999999998 8888753221111   111110     0        001   11122


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      ....+.+++.+|++.+|++||++.++...|+++
T Consensus       240 ~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         240 CLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            335678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.38  E-value=3.3e-13  Score=102.87  Aligned_cols=97  Identities=11%  Similarity=0.069  Sum_probs=64.9

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh--CCCCCCCCc-hhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS--GEKAIDEEG-KVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt--g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      +.|+|||+...+.++.++||||||++++|+++  +..||.... ......+.....      ...      ... ....+
T Consensus       195 ~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~------~~~------~~~-~~~~~  261 (295)
T cd05097         195 IRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFR------NQG------RQI-YLSQT  261 (295)
T ss_pred             eeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhh------hcc------ccc-cCCCC
Confidence            57999999998999999999999999999988  556665221 111111111111      000      000 00111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVS  132 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~  132 (160)
                      ...+..+.+++.+||+.+|.+||++.+|++.|+
T Consensus       262 ~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         262 PLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            112346789999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.38  E-value=2.7e-13  Score=101.19  Aligned_cols=92  Identities=12%  Similarity=0.068  Sum_probs=66.7

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|++||....+.++.++|+||+|++++++++ |+.||.......  . ...+.               ... ....+..
T Consensus       168 ~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~-~~~~~---------------~~~-~~~~~~~  228 (261)
T cd05034         168 IKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE--V-LEQVE---------------RGY-RMPRPPN  228 (261)
T ss_pred             ccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--H-HHHHH---------------cCC-CCCCCCC
Confidence            57999999988889999999999999999998 999986322111  0 01111               000 1111122


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      .+..+.+++.+|+..+|.+||++.++.+.|+.
T Consensus       229 ~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         229 CPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             CCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            24567889999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.38  E-value=1.8e-13  Score=104.55  Aligned_cols=97  Identities=5%  Similarity=-0.076  Sum_probs=68.2

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc--hhHHHHH-HHHHcCCccccccchhhhhccccCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG--KVLWAKV-EGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      .+++.|+|||...+..++.++||||||++++|+++|+.||....  ....... ...+           ..+....+   
T Consensus       194 ~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~---  259 (294)
T PHA02882        194 RGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFI-----------KRLHEGKI---  259 (294)
T ss_pred             CCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHH-----------HHhhhhhh---
Confidence            35688999999988899999999999999999999999997331  1111110 0111           01111111   


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAV  131 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L  131 (160)
                       ....+...+.+++..|+..+|.+||++.++.+.|
T Consensus       260 -~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        260 -KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             -ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence             0112246678999999999999999999999876

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.37  E-value=2.3e-13  Score=102.15  Aligned_cols=93  Identities=19%  Similarity=0.175  Sum_probs=66.9

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|++||++..+.++.++|+||||++++|+++ |..|+......   .....+.               ... ..+.+..
T Consensus       173 ~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~---~~~~~~~---------------~~~-~~~~~~~  233 (267)
T cd05066         173 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ---DVIKAIE---------------EGY-RLPAPMD  233 (267)
T ss_pred             eeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH---HHHHHHh---------------CCC-cCCCCCC
Confidence            46999999988899999999999999999886 99998532211   0111111               000 1111122


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      .+..+..++.+|++.+|.+||++.++++.|+++
T Consensus       234 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         234 CPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             CCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            334668899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.37  E-value=9.9e-13  Score=99.64  Aligned_cols=108  Identities=9%  Similarity=-0.038  Sum_probs=65.4

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccc------cccchhhhhcccc
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGR------KVKRVKEWMDEIL   93 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~d~~l   93 (160)
                      .++.|+|||++.+..++.++||||+||+++|+++|+.||..... .....+.........+      ..........+..
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (287)
T cd07848         163 ATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAV  242 (287)
T ss_pred             cccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcc
Confidence            45789999999888899999999999999999999999974321 1111111111000000      0000000000000


Q ss_pred             CCC------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           94 LQD------SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        94 ~~~------~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       ..      .+.......+.+++.+|++.+|++||++.++++
T Consensus       243 -~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         243 -NHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             -cCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence             00      001112345789999999999999999998875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.37  E-value=5.4e-13  Score=99.31  Aligned_cols=90  Identities=14%  Similarity=0.117  Sum_probs=65.8

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +.+.|+|||+..++.++.++|+||||++++++++|+.|+......  ..+.....               ..  ....+.
T Consensus       163 ~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~--~~~~~~~~---------------~~--~~~~~~  223 (256)
T cd08218         163 GTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK--NLVLKIIR---------------GS--YPPVSS  223 (256)
T ss_pred             CCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH--HHHHHHhc---------------CC--CCCCcc
Confidence            456799999998888999999999999999999999998633211  11112221               11  111222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+.+++.+||+.+|.+||++.+|+.
T Consensus       224 ~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         224 HYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             cCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            33456788999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.37  E-value=3.4e-13  Score=103.88  Aligned_cols=85  Identities=18%  Similarity=0.142  Sum_probs=61.0

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+.+..++.++||||+||+++|+++|+.||......  ........               ..+   .++
T Consensus       154 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~--~~~~~~~~---------------~~~---~~~  213 (312)
T cd05585         154 CGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN--EMYRKILQ---------------EPL---RFP  213 (312)
T ss_pred             cCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH--HHHHHHHc---------------CCC---CCC
Confidence            3567899999999889999999999999999999999999633211  11111121               111   222


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSM  124 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~  124 (160)
                      ......+.+++.+||..+|.+||++
T Consensus       214 ~~~~~~~~~li~~~L~~dp~~R~~~  238 (312)
T cd05585         214 DGFDRDAKDLLIGLLSRDPTRRLGY  238 (312)
T ss_pred             CcCCHHHHHHHHHHcCCCHHHcCCC
Confidence            2233456788999999999999864

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.37  E-value=3.1e-13  Score=100.55  Aligned_cols=91  Identities=18%  Similarity=0.113  Sum_probs=67.2

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+.+.|++||......++.++|+||||++++++++|..|+......   .+...+.               ... ....+
T Consensus       171 ~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~---------------~~~-~~~~~  231 (265)
T cd08217         171 VGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL---QLASKIK---------------EGK-FRRIP  231 (265)
T ss_pred             ccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH---HHHHHHh---------------cCC-CCCCc
Confidence            4567899999998888999999999999999999999998743211   1111111               111 11223


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+|++.+|++||++.+|++
T Consensus       232 ~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         232 YRYSSELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             cccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence            334456789999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.37  E-value=2.1e-13  Score=102.47  Aligned_cols=89  Identities=15%  Similarity=0.176  Sum_probs=61.3

Q ss_pred             CCCcchhhHhh-hcCCcccCccCCCeeehhhhh-hCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           22 RPSMVDIVYAL-SKSDDLLSDISDDALSSSQLI-SGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        22 ~~~y~aPE~~~-~~~~s~ksDv~s~Gvvl~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ...|+|||.+. .+.++.++||||||++++|++ +|..|+.........   ....               ... .  ..
T Consensus       171 ~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~---~~~~---------------~~~-~--~~  229 (262)
T cd05077         171 RIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE---RFYE---------------GQC-M--LV  229 (262)
T ss_pred             cccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH---HHHh---------------cCc-c--CC
Confidence            46799999887 456889999999999999997 588887522110000   1110               111 0  00


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAV  131 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L  131 (160)
                      ......+..++.+||+.+|.+||++.+|++.|
T Consensus       230 ~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         230 TPSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             CCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            11124568899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.37  E-value=2.2e-13  Score=101.71  Aligned_cols=92  Identities=11%  Similarity=0.075  Sum_probs=65.7

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ..+.|+|||...+..++.++||||+|++++|+++|+.||......  ........               ... ....+.
T Consensus       169 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~---------------~~~-~~~~~~  230 (263)
T cd06625         169 GTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM--AAIFKIAT---------------QPT-NPQLPS  230 (263)
T ss_pred             cCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH--HHHHHHhc---------------cCC-CCCCCc
Confidence            446899999999888999999999999999999999998632211  11011111               111 112333


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .....+..++.+||..+|.+||++.+++..
T Consensus       231 ~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         231 HVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             cCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            334566889999999999999999998763

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.37  E-value=6.8e-13  Score=102.72  Aligned_cols=90  Identities=14%  Similarity=0.067  Sum_probs=64.7

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+....++.++||||+||+++|+++|+.||..........  ....               ..   ..++
T Consensus       156 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~--~~~~---------------~~---~~~p  215 (323)
T cd05571         156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE--LILM---------------EE---IRFP  215 (323)
T ss_pred             ecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHH--HHHc---------------CC---CCCC
Confidence            35689999999998899999999999999999999999996332211111  1111               01   1122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRP-----SMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~  129 (160)
                      ......+.+++.+|++.||++||     +..++++
T Consensus       216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         216 RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence            22334568899999999999999     6887764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.37  E-value=4.2e-13  Score=104.18  Aligned_cols=41  Identities=22%  Similarity=0.090  Sum_probs=37.8

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDE   61 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~   61 (160)
                      +.+.|+|||++.+..++.++||||||++++|+++|+.||..
T Consensus       164 g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~  204 (331)
T cd06649         164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP  204 (331)
T ss_pred             CCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            45789999999988999999999999999999999999963

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PTZ00284 protein kinase; Provisional

Probab=99.37  E-value=6.3e-13  Score=107.88  Aligned_cols=42  Identities=12%  Similarity=-0.031  Sum_probs=38.5

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEE   62 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~   62 (160)
                      +++.|+|||.+.+..++.++|||||||+++||++|+.||...
T Consensus       307 gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~  348 (467)
T PTZ00284        307 STRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH  348 (467)
T ss_pred             CCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            457899999999999999999999999999999999999743

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.36  E-value=3.4e-13  Score=101.86  Aligned_cols=95  Identities=16%  Similarity=0.191  Sum_probs=69.0

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|++||....+.++.++|+||||++++|+++ |+.|+.......   +...+.               ... ....+..
T Consensus       175 ~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~---------------~~~-~~~~~~~  235 (279)
T cd05057         175 IKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE---IPDLLE---------------KGE-RLPQPPI  235 (279)
T ss_pred             ccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH---HHHHHh---------------CCC-CCCCCCC
Confidence            46999999988899999999999999999998 999986322111   111111               000 1111122


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      +...+..++.+||..+|.+||++.+++..|..+..
T Consensus       236 ~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         236 CTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            23456788999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.36  E-value=4.7e-13  Score=109.05  Aligned_cols=90  Identities=13%  Similarity=0.105  Sum_probs=65.5

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++++|+|||++....++.++|||||||+++|+++|+.||.......  .+.....               ..  ....+.
T Consensus       233 gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~--~~~~~~~---------------~~--~~~~~~  293 (478)
T PTZ00267        233 GTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE--IMQQVLY---------------GK--YDPFPC  293 (478)
T ss_pred             CCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHh---------------CC--CCCCCc
Confidence            5688999999998899999999999999999999999986332211  1111111               11  111222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+.+++..||..+|++||++.+++.
T Consensus       294 ~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        294 PVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             cCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence            23346788999999999999999998864

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.36  E-value=5.9e-13  Score=99.91  Aligned_cols=92  Identities=16%  Similarity=0.120  Sum_probs=63.4

Q ss_pred             CCCCcchhhHhhhcC--CcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           21 KRPSMVDIVYALSKS--DDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~--~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      +.+.|+|||+...+.  ++.++|+||||++++++++|+.|+...............                ... ....
T Consensus       171 ~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~----------------~~~-~~~~  233 (268)
T cd06624         171 GTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGM----------------FKI-HPEI  233 (268)
T ss_pred             CCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhh----------------hcc-CCCC
Confidence            457899999986654  788999999999999999999998632211000000000                001 1123


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +......+..++.+||+.+|.+||++.+++.
T Consensus       234 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         234 PESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             CcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            3334456788999999999999999999876

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.35  E-value=2.6e-13  Score=101.84  Aligned_cols=91  Identities=15%  Similarity=0.113  Sum_probs=61.4

Q ss_pred             CCCCcchhhHhh-----hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           21 KRPSMVDIVYAL-----SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        21 ~~~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      +.+.|+|||++.     ...++.++|+||||++++|+++|..|+..........  ....            ...+.+  
T Consensus       173 g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~--~~~~------------~~~~~~--  236 (272)
T cd06637         173 GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF--LIPR------------NPAPRL--  236 (272)
T ss_pred             ccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH--HHhc------------CCCCCC--
Confidence            346799999986     3457889999999999999999999986322111000  0010            000111  


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                        .+......+.+++.+||..+|.+||++.+++.
T Consensus       237 --~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         237 --KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             --CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence              11122345788999999999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.35  E-value=4.4e-13  Score=101.89  Aligned_cols=95  Identities=15%  Similarity=0.096  Sum_probs=68.4

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|++||.+..+.++.++||||||++++|+++ |..|+......   .+...+              .+...  ...+..
T Consensus       185 ~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~---~~~~~~--------------~~~~~--~~~~~~  245 (288)
T cd05061         185 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE---QVLKFV--------------MDGGY--LDQPDN  245 (288)
T ss_pred             ccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH--------------HcCCC--CCCCCC
Confidence            46999999998899999999999999999998 77787532211   111111              11111  111222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ....+.+++.+|++.+|++||++.++++.|++...
T Consensus       246 ~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~  280 (288)
T cd05061         246 CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH  280 (288)
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcC
Confidence            23567899999999999999999999999998644

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.35  E-value=8.4e-13  Score=100.91  Aligned_cols=93  Identities=16%  Similarity=0.055  Sum_probs=65.8

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ...+.|+|||......++.++||||||++++++++|+.||..........  ....              .... ....+
T Consensus       177 ~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~--~~~~--------------~~~~-~~~~~  239 (296)
T cd06654         177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY--LIAT--------------NGTP-ELQNP  239 (296)
T ss_pred             cCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHH--HHhc--------------CCCC-CCCCc
Confidence            44578999999988889999999999999999999999996332111000  1110              0000 11122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+||..+|.+||++.+|+.
T Consensus       240 ~~~~~~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         240 EKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             cccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence            233345678999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.35  E-value=1.8e-12  Score=102.81  Aligned_cols=104  Identities=15%  Similarity=0.079  Sum_probs=77.7

Q ss_pred             HhHhhhhcccC-----CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccc
Q 047377            8 MGIAIACLHKD-----PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKV   82 (160)
Q Consensus         8 ~~~~~~~~~~~-----~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ||++......+     .-++|.||+||.+.+..|+.|+||||+||+++|+.+-+++|..++......  ...+       
T Consensus       150 fGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~--ki~~-------  220 (426)
T KOG0589|consen  150 FGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELIL--KINR-------  220 (426)
T ss_pred             hhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHH--HHhh-------
Confidence            45555433333     567899999999999999999999999999999999999997544322111  2221       


Q ss_pred             cchhhhhccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           83 KRVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        83 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                               .. ..+.|......+..++..|+..+|..||+..+++..
T Consensus       221 ---------~~-~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  221 ---------GL-YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             ---------cc-CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence                     11 234455556677889999999999999999999875

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.35  E-value=8.3e-13  Score=100.08  Aligned_cols=102  Identities=14%  Similarity=0.066  Sum_probs=68.6

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchh-----HHHHHHHHHcCCccccccchhhhhccccC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKV-----LWAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      .+...|++||++..+.++.++|+||||++++++++|+.||......     ....+...           ....+.... 
T Consensus       163 ~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~-  230 (284)
T cd06620         163 VGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDL-----------LQQIVQEPP-  230 (284)
T ss_pred             ccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHH-----------HHHHhhccC-
Confidence            3457899999998889999999999999999999999999732210     00000000           011111111 


Q ss_pred             CCCCCH-HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377           95 QDSISM-EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus        95 ~~~~~~-~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                       ...+. .....+.+++.+|++.+|.+||++.+++...--+
T Consensus       231 -~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~  270 (284)
T cd06620         231 -PRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFI  270 (284)
T ss_pred             -CCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence             11111 2345678899999999999999999999864333

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.35  E-value=7.4e-13  Score=100.45  Aligned_cols=105  Identities=10%  Similarity=-0.003  Sum_probs=65.3

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchh-------hhhccc
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVK-------EWMDEI   92 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~d~~   92 (160)
                      .++.|+|||.+....++.++||||||++++|+++|+.||..... .....+.....-..   .....       ..+.+.
T Consensus       171 ~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~  247 (290)
T cd07862         171 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG---EEDWPRDVALPRQAFHSK  247 (290)
T ss_pred             ccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCC---hhhchhhhcccchhccCC
Confidence            45789999999888999999999999999999999999974321 11111111110000   00000       000000


Q ss_pred             cCCC---CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           93 LLQD---SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        93 l~~~---~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      . ..   .........+.+++.+|++.+|++||++.+++.
T Consensus       248 ~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         248 S-AQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             C-CCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            0 00   000112245678999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.34  E-value=5.3e-13  Score=100.14  Aligned_cols=90  Identities=11%  Similarity=0.117  Sum_probs=60.7

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ....|+|||++....++.++||||||++++|+++|+.||.....  ...+.....               ... ....+.
T Consensus       171 ~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~--~~~~~~~~~---------------~~~-~~~~~~  232 (266)
T cd06651         171 GTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA--MAAIFKIAT---------------QPT-NPQLPS  232 (266)
T ss_pred             ccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch--HHHHHHHhc---------------CCC-CCCCch
Confidence            45689999999888899999999999999999999999863211  111111110               000 112232


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+..++ .||..+|++||++.+|+.
T Consensus       233 ~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         233 HISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             hcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            2233344554 688899999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.34  E-value=3.6e-13  Score=101.79  Aligned_cols=91  Identities=16%  Similarity=0.121  Sum_probs=61.5

Q ss_pred             CCCCcchhhHhh-----hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           21 KRPSMVDIVYAL-----SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        21 ~~~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      +.+.|+|||.+.     ...++.++|+||||++++|+++|..|+......  .......            ....+.+  
T Consensus       183 ~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~--~~~~~~~------------~~~~~~~--  246 (282)
T cd06636         183 GTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM--RALFLIP------------RNPPPKL--  246 (282)
T ss_pred             ccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH--hhhhhHh------------hCCCCCC--
Confidence            346799999876     346788999999999999999999998632210  0000000            0001111  


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                        ........+.+++.+||..+|.+||++.+|+.
T Consensus       247 --~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         247 --KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             --cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence              11123346788999999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.34  E-value=6.5e-13  Score=102.60  Aligned_cols=89  Identities=17%  Similarity=0.120  Sum_probs=64.4

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +++.|+|||.+.+..++.++|||||||+++++++|+.||..........  ....               ...   .++.
T Consensus       158 g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~--~i~~---------------~~~---~~~~  217 (318)
T cd05570         158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQ--SILE---------------DEV---RYPR  217 (318)
T ss_pred             cCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHH--HHHc---------------CCC---CCCC
Confidence            4578999999999999999999999999999999999996433211111  1111               111   1222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSM-----VDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~-----~ev~~  129 (160)
                      .....+.+++.+||+.+|.+||+.     .+++.
T Consensus       218 ~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         218 WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence            233456889999999999999998     77754

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=1.7e-12  Score=100.70  Aligned_cols=100  Identities=12%  Similarity=0.005  Sum_probs=66.6

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..+++.|+|||.+....++.++|||||||+++||++|..||..........  ....      .   ...+.... ....
T Consensus       158 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~--~i~~------~---~~~~~~~~-~~~~  225 (333)
T cd05600         158 VVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWE--NLKY------W---KETLQRPV-YDDP  225 (333)
T ss_pred             cccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHH--HHHh------c---cccccCCC-CCcc
Confidence            345689999999998899999999999999999999999997432211100  1110      0   00000000 0000


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .......+..++.+|+..+|.+||++.+++..
T Consensus       226 ~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         226 RFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             ccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            01223456788899999999999999999864

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.34  E-value=6.1e-13  Score=104.13  Aligned_cols=95  Identities=14%  Similarity=0.110  Sum_probs=63.0

Q ss_pred             CCCCCcchhhHhhh-----cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccC
Q 047377           20 SKRPSMVDIVYALS-----KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        20 ~~~~~y~aPE~~~~-----~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      .+++.|+|||.+..     ...+.++|||||||+++|+++|+.||.......+........               ... 
T Consensus       229 ~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~---------------~~~-  292 (353)
T PLN00034        229 VGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAIC---------------MSQ-  292 (353)
T ss_pred             ccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHh---------------ccC-
Confidence            34578999998743     223468999999999999999999996322111111111110               000 


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ....+......+.+++.+||+.+|.+||++.|+++.
T Consensus       293 ~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        293 PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            112222334567889999999999999999999873

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.34  E-value=1.1e-12  Score=108.58  Aligned_cols=91  Identities=18%  Similarity=0.159  Sum_probs=70.1

Q ss_pred             CCCcchhhHhhhc--CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           22 RPSMVDIVYALSK--SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        22 ~~~y~aPE~~~~~--~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      +.-|||||++-.|  .|...+|||||||++.||.||++||.+-+.....    .++            +---+. .+++|
T Consensus       739 TLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA----MFk------------VGmyKv-HP~iP  801 (1226)
T KOG4279|consen  739 TLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA----MFK------------VGMYKV-HPPIP  801 (1226)
T ss_pred             chhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh----hhh------------hcceec-CCCCc
Confidence            3579999999776  5788999999999999999999999743321111    110            000122 56778


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .+...+....+.+|+.++|.+||+++++++
T Consensus       802 eelsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  802 EELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             HHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence            888889999999999999999999999876

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.33  E-value=5e-13  Score=99.28  Aligned_cols=89  Identities=24%  Similarity=0.193  Sum_probs=64.1

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      .+.|+|||......++.++||||||++++++++|..|+......  ........               ..  ....+..
T Consensus       164 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~~~~~---------------~~--~~~~~~~  224 (256)
T cd08220         164 TPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP--ALVLKIMS---------------GT--FAPISDR  224 (256)
T ss_pred             CCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH--HHHHHHHh---------------cC--CCCCCCC
Confidence            46899999998888899999999999999999999998632211  11111111               00  1112222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ....+..++..||+.+|.+||++.+++.
T Consensus       225 ~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         225 YSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             cCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            3345688999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.33  E-value=5.7e-13  Score=103.15  Aligned_cols=89  Identities=12%  Similarity=0.122  Sum_probs=63.8

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +++.|+|||++....++.++||||||++++|+++|+.||......  ........               ...   ..+.
T Consensus       162 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~--~~~~~~~~---------------~~~---~~~~  221 (323)
T cd05584         162 GTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK--KTIDKILK---------------GKL---NLPP  221 (323)
T ss_pred             CCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH--HHHHHHHc---------------CCC---CCCC
Confidence            467899999998888999999999999999999999999743321  11111121               111   1222


Q ss_pred             HHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRP-----SMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~  129 (160)
                      .....+.+++.+|++.+|.+||     +..+++.
T Consensus       222 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         222 YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            2234568899999999999999     6776655

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.33  E-value=3.8e-13  Score=101.75  Aligned_cols=90  Identities=17%  Similarity=0.194  Sum_probs=62.4

Q ss_pred             CCCcchhhHhhh-cCCcccCccCCCeeehhhh-hhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           22 RPSMVDIVYALS-KSDDLLSDISDDALSSSQL-ISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        22 ~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~el-ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+.|+|||.+.. ..++.++||||||++++|+ ++|..|+.........   ..+.      .       ...+ .... 
T Consensus       183 ~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~---~~~~------~-------~~~~-~~~~-  244 (274)
T cd05076         183 RIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE---RFYE------K-------KHRL-PEPS-  244 (274)
T ss_pred             CCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH---HHHH------h-------ccCC-CCCC-
Confidence            467999998865 4688999999999999998 4788888632211110   1110      0       0111 1111 


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVS  132 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~  132 (160)
                         ...+.+++.+||+.+|.+||++.+|++.|.
T Consensus       245 ---~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         245 ---CKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             ---ChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence               235688999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.33  E-value=5e-13  Score=102.19  Aligned_cols=93  Identities=15%  Similarity=0.021  Sum_probs=65.0

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ...+.|++||.+..+.++.++||||||++++++++|+.||..........  ....      ..      .+.   ...+
T Consensus       176 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~--~~~~------~~------~~~---~~~~  238 (296)
T cd06655         176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY--LIAT------NG------TPE---LQNP  238 (296)
T ss_pred             CCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHh------cC------Ccc---cCCc
Confidence            34568999999988889999999999999999999999996432211110  1110      00      001   1122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+||..+|.+||++.+|+.
T Consensus       239 ~~~~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         239 EKLSPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             ccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            223345678899999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.33  E-value=1.2e-12  Score=98.10  Aligned_cols=90  Identities=13%  Similarity=0.082  Sum_probs=64.8

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ..+.|++||.+..+.++.++|+||+|++++++++|..||.....  ...+....            ....+     ..+.
T Consensus       174 ~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~------------~~~~~-----~~~~  234 (267)
T cd06628         174 GSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ--LQAIFKIG------------ENASP-----EIPS  234 (267)
T ss_pred             CCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH--HHHHHHHh------------ccCCC-----cCCc
Confidence            34679999999888899999999999999999999999963221  11111111            11111     2222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+..++.+||+.+|.+||++.+|++
T Consensus       235 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         235 NISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             ccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            33456688899999999999999998875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.32  E-value=9e-13  Score=106.96  Aligned_cols=99  Identities=9%  Similarity=0.058  Sum_probs=71.2

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh--CCCCCCC-CchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS--GEKAIDE-EGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt--g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ..|||+|.+.-++++.+||||+||+++||+++  ...||.. .+..........+.+     ..       +.. -..-|
T Consensus       703 iRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~-----~~-------~~~-~l~~P  769 (807)
T KOG1094|consen  703 IRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRD-----QG-------RQV-VLSRP  769 (807)
T ss_pred             eeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCC-----CC-------cce-eccCC
Confidence            47999999999999999999999999999964  7788861 222222222222210     00       011 12234


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      .-++..+.+++.+||..+..+||+|++++..|+..
T Consensus       770 ~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  770 PACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             CcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            55667888999999999999999999999998765

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.32  E-value=1.3e-12  Score=101.03  Aligned_cols=85  Identities=13%  Similarity=0.124  Sum_probs=62.0

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||++..+.++.++|||||||+++|+++|+.||..........  ...               ....   .+|
T Consensus       162 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~--~i~---------------~~~~---~~p  221 (323)
T cd05616         162 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ--SIM---------------EHNV---AYP  221 (323)
T ss_pred             CCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHH--HHH---------------hCCC---CCC
Confidence            34688999999999999999999999999999999999997433211111  111               1111   223


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSM  124 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~  124 (160)
                      ......+.+++.+|++.+|.+|++.
T Consensus       222 ~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         222 KSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             CcCCHHHHHHHHHHcccCHHhcCCC
Confidence            3334566889999999999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.32  E-value=8.1e-13  Score=102.31  Aligned_cols=90  Identities=12%  Similarity=0.077  Sum_probs=64.1

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+..+.++.++||||||++++|+++|+.||.........   ..+.              ....   .++
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~---~~i~--------------~~~~---~~p  216 (325)
T cd05594         157 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF---ELIL--------------MEEI---RFP  216 (325)
T ss_pred             cCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHH---HHHh--------------cCCC---CCC
Confidence            3568899999999889999999999999999999999999633211110   1110              0011   112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRP-----SMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~  129 (160)
                      ......+..++.+|++.+|++|+     ++.++++
T Consensus       217 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  251 (325)
T cd05594         217 RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence            22234567889999999999996     7888864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.32  E-value=1.4e-12  Score=100.94  Aligned_cols=90  Identities=13%  Similarity=0.104  Sum_probs=63.1

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+.+..++.++||||||++++|+++|+.||..........  ....               ...   .++
T Consensus       162 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~--~i~~---------------~~~---~~p  221 (324)
T cd05589         162 CGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFD--SIVN---------------DEV---RYP  221 (324)
T ss_pred             ccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHH--HHHh---------------CCC---CCC
Confidence            35678999999998899999999999999999999999996433211111  1111               111   122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPS-----MVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs-----~~ev~~  129 (160)
                      ......+.+++.+|++.+|.+||+     +.+++.
T Consensus       222 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         222 RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence            222345678999999999999994     555544

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.32  E-value=1.2e-12  Score=101.60  Aligned_cols=90  Identities=19%  Similarity=0.110  Sum_probs=63.2

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+.+.|+|||.+....++.++|||||||+++|+++|..||......  ........               ..+   .++
T Consensus       176 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--~~~~~i~~---------------~~~---~~p  235 (329)
T PTZ00263        176 CGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF--RIYEKILA---------------GRL---KFP  235 (329)
T ss_pred             cCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH--HHHHHHhc---------------CCc---CCC
Confidence            3467899999999889999999999999999999999999633211  11111111               111   112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPS-----MVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs-----~~ev~~  129 (160)
                      ......+.+++.+||+.||.+|++     +.+++.
T Consensus       236 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  270 (329)
T PTZ00263        236 NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN  270 (329)
T ss_pred             CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            212245678999999999999986     566653

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.32  E-value=1.1e-12  Score=98.08  Aligned_cols=94  Identities=20%  Similarity=0.188  Sum_probs=66.0

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc---hhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG---KVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      ....+.|++||......++.++|+||||++++++++|..|+....   ......+....               ...  .
T Consensus       159 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------------~~~--~  221 (265)
T cd06605         159 FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV---------------NEP--P  221 (265)
T ss_pred             ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHh---------------cCC--C
Confidence            344578999999988899999999999999999999999986321   11111111111               111  1


Q ss_pred             CCCCHH-HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSISME-GVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~~~-~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ...+.. ....+..++..||..+|.+||++.+++.
T Consensus       222 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         222 PRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             CCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence            112222 3455788999999999999999999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.31  E-value=1.9e-12  Score=96.09  Aligned_cols=92  Identities=11%  Similarity=-0.038  Sum_probs=67.5

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ....+.|++||......++.++|+||+|++++++++|+.|+.........   ..+.               ... ....
T Consensus       161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~---~~~~---------------~~~-~~~~  221 (256)
T cd08530         161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLR---YKVQ---------------RGK-YPPI  221 (256)
T ss_pred             ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHh---------------cCC-CCCC
Confidence            34567899999998888999999999999999999999998643311111   1111               111 1222


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +......+..++.+|+..+|.+||++.++++
T Consensus       222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         222 PPIYSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             chhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            3344566789999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.31  E-value=1e-12  Score=99.61  Aligned_cols=88  Identities=14%  Similarity=0.149  Sum_probs=61.1

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhH-HHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVL-WAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+++.|+|||.+..+.++.++||||||++++|+++|+.||....... ......              ......   ..+
T Consensus       158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~--------------~~~~~~---~~~  220 (280)
T cd05608         158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ--------------RILNDS---VTY  220 (280)
T ss_pred             CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHH--------------hhcccC---CCC
Confidence            34578999999999999999999999999999999999996322111 011000              111111   122


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSM  124 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~  124 (160)
                      +......+.+++.+|++.+|.+||++
T Consensus       221 ~~~~~~~~~~li~~~l~~~P~~R~~~  246 (280)
T cd05608         221 PDKFSPASKSFCEALLAKDPEKRLGF  246 (280)
T ss_pred             cccCCHHHHHHHHHHhcCCHHHhcCC
Confidence            23334567889999999999999944

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.31  E-value=1.3e-12  Score=97.59  Aligned_cols=94  Identities=18%  Similarity=0.179  Sum_probs=64.1

Q ss_pred             CCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC-
Q 047377           21 KRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI-   98 (160)
Q Consensus        21 ~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~-   98 (160)
                      ..+.|++||++..+ .++.++|+||||++++|+++|..|+.....  .........      .      ..+.+ .... 
T Consensus       168 ~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~--~~~~~~~~~------~------~~~~~-~~~~~  232 (267)
T cd06610         168 GTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPP--MKVLMLTLQ------N------DPPSL-ETGAD  232 (267)
T ss_pred             CChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccCh--hhhHHHHhc------C------CCCCc-CCccc
Confidence            34679999998877 789999999999999999999999863221  111111111      0      00111 1111 


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .......+.+++..||..+|.+||++.+|+.
T Consensus       233 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         233 YKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             cccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            0123356789999999999999999999876

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.31  E-value=1.7e-12  Score=100.28  Aligned_cols=89  Identities=15%  Similarity=0.094  Sum_probs=63.3

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +++.|+|||.+....++.++||||+|++++|+++|+.||..........  ....               ...   ..+.
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~--~i~~---------------~~~---~~p~  217 (321)
T cd05591         158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFE--SILH---------------DDV---LYPV  217 (321)
T ss_pred             cCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHH--HHHc---------------CCC---CCCC
Confidence            4678999999988899999999999999999999999997433211111  1111               111   1111


Q ss_pred             HHHHHHHHHHHHccccCCCCCC-------CHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRP-------SMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RP-------s~~ev~~  129 (160)
                      .....+.+++..|++.+|.+|+       ++.+++.
T Consensus       218 ~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~  253 (321)
T cd05591         218 WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ  253 (321)
T ss_pred             CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence            2234567889999999999999       6666654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.31  E-value=6.5e-13  Score=102.87  Aligned_cols=90  Identities=13%  Similarity=0.088  Sum_probs=63.8

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+..+.++.++|||||||+++|+++|+.||..........  ....               ...   .++
T Consensus       156 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~--~~~~---------------~~~---~~p  215 (323)
T cd05595         156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE--LILM---------------EEI---RFP  215 (323)
T ss_pred             cCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHH--HHhc---------------CCC---CCC
Confidence            35678999999998899999999999999999999999986322111100  1111               111   122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRP-----SMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~  129 (160)
                      ......+.+++.+|++.+|++|+     +..++++
T Consensus       216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         216 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence            22234567899999999999998     7777764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.31  E-value=1e-12  Score=99.77  Aligned_cols=93  Identities=15%  Similarity=0.098  Sum_probs=62.4

Q ss_pred             CCCCCcchhhHhhhcC-----CcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccC
Q 047377           20 SKRPSMVDIVYALSKS-----DDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~-----~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      .+.+.|++||.+..+.     ++.++||||||++++|+++|+.|+.....  ...+.....       ..     .+.+ 
T Consensus       189 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~--~~~~~~~~~-------~~-----~~~~-  253 (291)
T cd06639         189 VGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP--VKTLFKIPR-------NP-----PPTL-  253 (291)
T ss_pred             cCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH--HHHHHHHhc-------CC-----CCCC-
Confidence            3457899999876443     67899999999999999999999863211  111111111       00     0111 


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                        ..+......+..++.+||+.+|.+||++.+++.
T Consensus       254 --~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         254 --LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             --CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence              111222345788999999999999999999876

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.31  E-value=1.3e-12  Score=96.30  Aligned_cols=96  Identities=11%  Similarity=0.032  Sum_probs=66.1

Q ss_pred             CCcchhhHhhh---cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhh-hhccccCCCCC
Q 047377           23 PSMVDIVYALS---KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKE-WMDEILLQDSI   98 (160)
Q Consensus        23 ~~y~aPE~~~~---~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~l~~~~~   98 (160)
                      ..|.|||.+.-   ..+++++||||+||++|+++.|..||.           .....     .+.+.- +..+.+ .-+-
T Consensus       202 ~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe-----------~~~~~-----GgSlaLAv~n~q~-s~P~  264 (302)
T KOG2345|consen  202 IPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFE-----------RIYQQ-----GGSLALAVQNAQI-SIPN  264 (302)
T ss_pred             CcccCchheecccCcccccccchhhhhHHHHHHHHcCCcch-----------HHhhc-----CCeEEEeeecccc-ccCC
Confidence            35999998753   357899999999999999999999997           11110     111111 111111 0011


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      .......+..++..|+++||.+||+..+++..++++.
T Consensus       265 ~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  265 SSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             CCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence            1113456788999999999999999999999998763

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.31  E-value=1.6e-12  Score=100.59  Aligned_cols=85  Identities=12%  Similarity=0.031  Sum_probs=61.0

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+....++.++||||||++++|+++|+.||........   ...+.              ....   ..+
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~---~~~i~--------------~~~~---~~~  216 (320)
T cd05590         157 CGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL---FEAIL--------------NDEV---VYP  216 (320)
T ss_pred             ccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH---HHHHh--------------cCCC---CCC
Confidence            356899999999988899999999999999999999999974332111   11111              0111   112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSM  124 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~  124 (160)
                      ......+.+++.+|++.+|.+||+.
T Consensus       217 ~~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         217 TWLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             CCCCHHHHHHHHHHcccCHHHCCCC
Confidence            2223456788999999999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.31  E-value=2e-12  Score=96.35  Aligned_cols=94  Identities=17%  Similarity=0.095  Sum_probs=64.2

Q ss_pred             CCCCcchhhHhhhc---CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           21 KRPSMVDIVYALSK---SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        21 ~~~~y~aPE~~~~~---~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..+.|++||.....   .++.++|+||||++++|+++|..|+..........  ....       .   ..-.+.+   .
T Consensus       163 ~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~--~~~~-------~---~~~~~~~---~  227 (262)
T cd06613         163 GTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF--LISK-------S---NFPPPKL---K  227 (262)
T ss_pred             CCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHh-------c---cCCCccc---c
Confidence            34679999998776   78999999999999999999999986322111000  1110       0   0000111   1


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .+......+.+++.+||..+|.+||++.+|+.
T Consensus       228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         228 DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            22233456789999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.31  E-value=1.7e-12  Score=98.66  Aligned_cols=92  Identities=16%  Similarity=0.072  Sum_probs=64.4

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      +.+.|+|||.+....++.++||||+|++++|+++|..||...... ....+...+               ...  ...++
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~---------------~~~--~~~~~  225 (285)
T cd05605         163 GTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRV---------------KED--QEEYS  225 (285)
T ss_pred             CCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHh---------------hhc--ccccC
Confidence            457899999998888999999999999999999999999632211 111111111               111  11223


Q ss_pred             HHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRP-----SMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~  129 (160)
                      ......+..++.+||+.||.+||     ++.+++.
T Consensus       226 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         226 EKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             cccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence            33345668899999999999999     6667644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.31  E-value=1.2e-12  Score=97.96  Aligned_cols=92  Identities=16%  Similarity=0.125  Sum_probs=62.2

Q ss_pred             CCCCcchhhHhhh-----cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           21 KRPSMVDIVYALS-----KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        21 ~~~~y~aPE~~~~-----~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      ..+.|+|||.+..     ..++.++||||||++++++++|..|+.....  .........            ...+.+  
T Consensus       175 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~------------~~~~~~--  238 (275)
T cd06608         175 GTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP--MRALFKIPR------------NPPPTL--  238 (275)
T ss_pred             ccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch--HHHHHHhhc------------cCCCCC--
Confidence            3467999998753     3467899999999999999999999862211  111111111            000111  


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       ..+......+.+++.+|+..+|.+||++.+++.
T Consensus       239 -~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         239 -KSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             -CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence             122223456789999999999999999999875

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.31  E-value=3.9e-12  Score=98.51  Aligned_cols=109  Identities=15%  Similarity=0.065  Sum_probs=64.6

Q ss_pred             CCCCCcchhhHhhh--cCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccc--------cccchhhh
Q 047377           20 SKRPSMVDIVYALS--KSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGR--------KVKRVKEW   88 (160)
Q Consensus        20 ~~~~~y~aPE~~~~--~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~   88 (160)
                      ..++.|+|||.+..  ..++.++|||||||+++|+++|+.||...... ....+.........+        ........
T Consensus       167 ~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  246 (338)
T cd07859         167 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSS  246 (338)
T ss_pred             CCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHh
Confidence            35678999999865  67899999999999999999999999643211 111111111000000        00000000


Q ss_pred             hccccCCCCCCH---HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           89 MDEILLQDSISM---EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        89 ~d~~l~~~~~~~---~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +.... ......   .....+.+++.+||+.+|.+||++.+++.
T Consensus       247 ~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~  289 (338)
T cd07859         247 MRKKQ-PVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA  289 (338)
T ss_pred             hcccC-CCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            11110 000000   11235678999999999999999999986

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.31  E-value=1.9e-12  Score=99.95  Aligned_cols=88  Identities=13%  Similarity=0.062  Sum_probs=62.5

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +++.|+|||.+.+..++.++||||||++++|+++|+.||........   ...+.              ..   ...++.
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~---~~~i~--------------~~---~~~~~~  217 (316)
T cd05592         158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDEL---FDSIL--------------ND---RPHFPR  217 (316)
T ss_pred             CCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHH---HHHHH--------------cC---CCCCCC
Confidence            46789999999988999999999999999999999999964322111   11111              00   111222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMV-DIV  128 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~-ev~  128 (160)
                      .....+.+++..||+.+|.+||++. ++.
T Consensus       218 ~~~~~~~~ll~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05592         218 WISKEAKDCLSKLFERDPTKRLGVDGDIR  246 (316)
T ss_pred             CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            2334567889999999999999875 443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.30  E-value=3.7e-12  Score=96.46  Aligned_cols=93  Identities=18%  Similarity=0.135  Sum_probs=63.7

Q ss_pred             CCCCcchhhHhhhcC------CcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccC
Q 047377           21 KRPSMVDIVYALSKS------DDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~------~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      ..++|++||.+....      ++.++|+||||++++++++|..||..........   .+           ....+..  
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~---~~-----------~~~~~~~--  226 (286)
T cd06622         163 GCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFA---QL-----------SAIVDGD--  226 (286)
T ss_pred             CccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHH---HH-----------HHHhhcC--
Confidence            456899999986543      4789999999999999999999986322111111   00           0111111  


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ....+......+..++.+||+.+|.+||++.+++.
T Consensus       227 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         227 PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence            12233334556788999999999999999998886

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.30  E-value=2.5e-12  Score=99.21  Aligned_cols=86  Identities=10%  Similarity=0.033  Sum_probs=61.1

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +++.|+|||.+....++.++||||||++++|+++|+.||..........  ....               ...   ..+.
T Consensus       160 g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~--~i~~---------------~~~---~~p~  219 (318)
T cd05582         160 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMT--MILK---------------AKL---GMPQ  219 (318)
T ss_pred             CChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHH--HHHc---------------CCC---CCCC
Confidence            4678999999988889999999999999999999999996332111111  1111               111   1222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVD  126 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~e  126 (160)
                      .....+..++.+||+.+|.+||++.+
T Consensus       220 ~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         220 FLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             CCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            22345678899999999999999544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.30  E-value=2.1e-12  Score=100.97  Aligned_cols=97  Identities=21%  Similarity=0.029  Sum_probs=68.8

Q ss_pred             cCCCCCCCcchhhHhhhcCCc---ccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhcccc
Q 047377           17 KDPSKRPSMVDIVYALSKSDD---LLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEIL   93 (160)
Q Consensus        17 ~~~~~~~~y~aPE~~~~~~~s---~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l   93 (160)
                      +--+++|+|.|||++.++.++   .++|+||+||+++-+++|-+||..+.......  +.+.              ..+.
T Consensus       336 ~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~--eQI~--------------~G~y  399 (475)
T KOG0615|consen  336 KTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLK--EQIL--------------KGRY  399 (475)
T ss_pred             hhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHH--HHHh--------------cCcc
Confidence            344678999999999877543   47799999999999999999998433211010  1111              1111


Q ss_pred             C-CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           94 L-QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        94 ~-~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      . .+........+...++.+++..||++||+..|+++
T Consensus       400 ~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  400 AFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             cccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence            0 12334455667789999999999999999998865

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.30  E-value=5.5e-13  Score=100.97  Aligned_cols=98  Identities=8%  Similarity=0.021  Sum_probs=65.0

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..+.+.|+|||++..+.++.++||||+||+++|+++|..|+..........  ....           ......+ ... 
T Consensus       154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~--~~~~-----------~~~~~~~-~~~-  218 (277)
T cd05607         154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKE--ELKR-----------RTLEDEV-KFE-  218 (277)
T ss_pred             cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHH--HHHH-----------Hhhcccc-ccc-
Confidence            345679999999998899999999999999999999999986321100000  0110           0111111 000 


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAV  131 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L  131 (160)
                      .......+.+++..||+.+|.+||++.++++.+
T Consensus       219 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~  251 (277)
T cd05607         219 HQNFTEESKDICRLFLAKKPEDRLGSREKNDDP  251 (277)
T ss_pred             cccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence            011234568899999999999999998776433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.30  E-value=2.3e-12  Score=100.08  Aligned_cols=90  Identities=13%  Similarity=0.078  Sum_probs=64.0

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +++.|+|||.+....++.++|||||||+++|+++|+.||.........   ..+.      .      .+.     .++.
T Consensus       157 gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~---~~~~------~------~~~-----~~p~  216 (328)
T cd05593         157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF---ELIL------M------EDI-----KFPR  216 (328)
T ss_pred             CCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHH---HHhc------c------CCc-----cCCC
Confidence            568999999999889999999999999999999999999632211100   1110      0      001     1222


Q ss_pred             HHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRP-----SMVDIVHA  130 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~~  130 (160)
                      .....+.+++.+|++.+|.+|+     ++.++++.
T Consensus       217 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         217 TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            2234567889999999999997     78887753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.30  E-value=1.3e-12  Score=99.72  Aligned_cols=90  Identities=14%  Similarity=0.066  Sum_probs=63.8

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+....++.++||||||++++|+++|+.||..........  ....               ..+   .++
T Consensus       159 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~--~i~~---------------~~~---~~~  218 (291)
T cd05612         159 CGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYE--KILA---------------GKL---EFP  218 (291)
T ss_pred             cCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHh---------------CCc---CCC
Confidence            35678999999988889999999999999999999999996432211111  1111               111   122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPS-----MVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs-----~~ev~~  129 (160)
                      ......+.+++.+|++.||.+||+     +.+++.
T Consensus       219 ~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  253 (291)
T cd05612         219 RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN  253 (291)
T ss_pred             ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence            222345678999999999999995     666654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.30  E-value=4.1e-12  Score=95.48  Aligned_cols=96  Identities=11%  Similarity=0.037  Sum_probs=60.6

Q ss_pred             CCCcchhhHhhhc-------CCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhcccc
Q 047377           22 RPSMVDIVYALSK-------SDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEIL   93 (160)
Q Consensus        22 ~~~y~aPE~~~~~-------~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l   93 (160)
                      .+.|+|||.+...       .++.++|+||||++++|+++ |..||..........  ....       .......++.+
T Consensus       165 ~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~--~~~~-------~~~~~~~~~~~  235 (269)
T cd05087         165 PLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLT--YTVR-------EQQLKLPKPRL  235 (269)
T ss_pred             cccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHH--HHhh-------cccCCCCCCcc
Confidence            3569999988532       35789999999999999996 999986322111000  1110       10111112222


Q ss_pred             CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 047377           94 LQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVS  132 (160)
Q Consensus        94 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~  132 (160)
                       ...    ....+..++..|| .+|.+||++.+|+..|+
T Consensus       236 -~~~----~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         236 -KLP----LSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             -CCC----CChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence             111    2234567888999 58999999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.30  E-value=1.8e-12  Score=100.13  Aligned_cols=88  Identities=11%  Similarity=0.097  Sum_probs=62.4

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +++.|+|||++....++.++||||||++++|+++|+.||......   .+...+.            ...+.     ++.
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~---~~~~~i~------------~~~~~-----~~~  217 (316)
T cd05619         158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE---ELFQSIR------------MDNPC-----YPR  217 (316)
T ss_pred             CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH---HHHHHHH------------hCCCC-----CCc
Confidence            457899999998889999999999999999999999999633211   1111111            00011     122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMV-DIV  128 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~-ev~  128 (160)
                      .....+.+++.+|++.+|.+||++. ++.
T Consensus       218 ~~~~~~~~li~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05619         218 WLTREAKDILVKLFVREPERRLGVKGDIR  246 (316)
T ss_pred             cCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence            2234567889999999999999986 553

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.30  E-value=1.9e-12  Score=99.96  Aligned_cols=89  Identities=11%  Similarity=0.066  Sum_probs=63.1

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+....++.++||||+|++++|+++|+.||.......   +...+.      .      ..+.     ++
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~---~~~~~~------~------~~~~-----~~  216 (316)
T cd05620         157 CGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE---LFESIR------V------DTPH-----YP  216 (316)
T ss_pred             CCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---HHHHHH------h------CCCC-----CC
Confidence            35689999999998899999999999999999999999996433211   111111      0      0011     12


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMV-DIV  128 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~-ev~  128 (160)
                      ......+.+++.+|++.+|.+||++. ++.
T Consensus       217 ~~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         217 RWITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            22234567899999999999999974 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.30  E-value=1e-12  Score=97.53  Aligned_cols=91  Identities=11%  Similarity=0.064  Sum_probs=64.5

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|++||......++.++|+||+|++++++++ |..|+..........  ....                .. ....+.
T Consensus       167 ~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~--~~~~----------------~~-~~~~~~  227 (258)
T smart00219      167 PIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLE--YLKK----------------GY-RLPKPE  227 (258)
T ss_pred             cccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH--HHhc----------------CC-CCCCCC
Confidence            368999999988889999999999999999998 788875322111111  1111                00 111122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAV  131 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L  131 (160)
                      .....+.+++.+|+..+|.+||++.++++.|
T Consensus       228 ~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      228 NCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             cCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            2345678899999999999999999998754

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.29  E-value=1.3e-12  Score=98.91  Aligned_cols=93  Identities=12%  Similarity=0.075  Sum_probs=62.1

Q ss_pred             CCCCCcchhhHhh-----hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccC
Q 047377           20 SKRPSMVDIVYAL-----SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        20 ~~~~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      ..++.|++||.+.     ...++.++|+||||++++|+++|+.|+.....  ...+.....       .     ..+.+ 
T Consensus       164 ~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--~~~~~~~~~-------~-----~~~~~-  228 (282)
T cd06643         164 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP--MRVLLKIAK-------S-----EPPTL-  228 (282)
T ss_pred             cccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH--HHHHHHHhh-------c-----CCCCC-
Confidence            3457899999874     34577899999999999999999999863221  111111111       0     00111 


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                        ..+......+.+++.+||+.+|.+||++.+++.
T Consensus       229 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         229 --AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             --CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence              112222346688999999999999999988764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.29  E-value=2e-12  Score=97.97  Aligned_cols=92  Identities=18%  Similarity=0.106  Sum_probs=64.6

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +.+.|++||.+....++.++|+||||++++++++|..|+.......  .......               ........+.
T Consensus       178 ~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~--~~~~~~~---------------~~~~~~~~~~  240 (286)
T cd06614         178 GTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR--ALFLITT---------------KGIPPLKNPE  240 (286)
T ss_pred             CCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHh---------------cCCCCCcchh
Confidence            4578999999988889999999999999999999999986322111  1001110               0000111111


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+..++.+|++.+|.+||++.+|+.
T Consensus       241 ~~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         241 KWSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             hCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            23456788999999999999999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.29  E-value=1.9e-12  Score=100.30  Aligned_cols=88  Identities=16%  Similarity=0.049  Sum_probs=62.3

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +++.|+|||++.+..++.++||||+|++++||++|..||.........  .....               ..+   ..+.
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~i~~---------------~~~---~~~~  217 (325)
T cd05602         158 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY--DNILN---------------KPL---QLKP  217 (325)
T ss_pred             CCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHH--HHHHh---------------CCc---CCCC
Confidence            568999999999889999999999999999999999999633221110  11111               111   1111


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIV  128 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~  128 (160)
                      .....+.+++.+|++.+|.+|++..+.+
T Consensus       218 ~~~~~~~~li~~~l~~~p~~R~~~~~~~  245 (325)
T cd05602         218 NITNSARHLLEGLLQKDRTKRLGAKDDF  245 (325)
T ss_pred             CCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence            2234567888999999999999876443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.29  E-value=1.3e-12  Score=97.04  Aligned_cols=90  Identities=16%  Similarity=0.131  Sum_probs=64.2

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +.+.|+|||+.....++.++|+||||++++|+++|..|+....  ....+.....               ...  ...+.
T Consensus       164 ~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~---------------~~~--~~~~~  224 (257)
T cd08225         164 GTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN--LHQLVLKICQ---------------GYF--APISP  224 (257)
T ss_pred             CCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHhc---------------ccC--CCCCC
Confidence            4567999999988889999999999999999999999986322  1111112121               111  01111


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+.+++.+|+..+|++||++.+++.
T Consensus       225 ~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         225 NFSRDLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             CCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            22245788899999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.29  E-value=3.6e-12  Score=99.17  Aligned_cols=42  Identities=19%  Similarity=0.071  Sum_probs=38.0

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDE   61 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~   61 (160)
                      .+.+.|+|||.+.+..++.++|||||||+++|+++|+.||..
T Consensus       163 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~  204 (333)
T cd06650         163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP  204 (333)
T ss_pred             CCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            345789999999888899999999999999999999999873

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.29  E-value=2.1e-12  Score=96.70  Aligned_cols=92  Identities=15%  Similarity=0.118  Sum_probs=64.1

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +.+.|+|||+.....++.++|+||||++++++++|..||..........  ....      .    ....+.+     +.
T Consensus       170 ~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~--~~~~------~----~~~~~~~-----~~  232 (265)
T cd06631         170 GTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMF--YIGA------H----RGLMPRL-----PD  232 (265)
T ss_pred             CCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHH--Hhhh------c----cCCCCCC-----CC
Confidence            4568999999988889999999999999999999999986322111000  0000      0    0001112     22


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+..++.+||+.+|.+||++.+++.
T Consensus       233 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         233 SFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             CCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            23345688999999999999999998875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.29  E-value=2e-12  Score=100.69  Aligned_cols=94  Identities=15%  Similarity=0.092  Sum_probs=64.2

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+....++.++|||||||+++||++|+.||..........  ....            +. ..+ ..+..
T Consensus       191 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~--~i~~------------~~-~~~-~~p~~  254 (350)
T cd05573         191 VGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYN--KIIN------------WK-ESL-RFPPD  254 (350)
T ss_pred             ccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHH--HHhc------------cC-Ccc-cCCCC
Confidence            45688999999999999999999999999999999999997433111111  1110            00 000 00000


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCC-HHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPS-MVDIVHA  130 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs-~~ev~~~  130 (160)
                      ......+..++..|+. +|.+||+ +.+++..
T Consensus       255 ~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         255 PPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            0123456788888997 9999999 9999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.29  E-value=2.2e-12  Score=99.83  Aligned_cols=85  Identities=18%  Similarity=0.087  Sum_probs=60.8

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +++.|+|||++....++.++|||||||+++|+++|..||.......  .......       .      ...+ ....  
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~~~~i~~-------~------~~~~-~~~~--  219 (323)
T cd05575         158 GTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE--MYDNILN-------K------PLRL-KPNI--  219 (323)
T ss_pred             CChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH--HHHHHHc-------C------CCCC-CCCC--
Confidence            4678999999998899999999999999999999999996332111  1111111       0      0111 1122  


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMV  125 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~  125 (160)
                        ...+.+++.+|++.+|.+||+..
T Consensus       220 --~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         220 --SVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             --CHHHHHHHHHHhhcCHHhCCCCC
Confidence              34568899999999999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.29  E-value=3.2e-12  Score=99.13  Aligned_cols=93  Identities=17%  Similarity=0.065  Sum_probs=61.8

Q ss_pred             CCCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           20 SKRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      .+++.|+|||.+... .++.++||||||++++|+++|..||..... .....+...+.            -.++.     
T Consensus       167 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~------------~~~~~-----  229 (332)
T cd05614         167 CGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRIL------------KCDPP-----  229 (332)
T ss_pred             cCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHh------------cCCCC-----
Confidence            356789999998765 478899999999999999999999963211 01111111110            01112     


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRP-----SMVDIVH  129 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~  129 (160)
                      .+......+.+++.+|++.+|++||     +..+++.
T Consensus       230 ~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         230 FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence            2222234567889999999999999     6666654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.29  E-value=9.3e-13  Score=111.29  Aligned_cols=94  Identities=15%  Similarity=0.120  Sum_probs=65.9

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      -+++.|+|||++.+..++.++|||||||+++|+++|+.||.......  .+...+.               .........
T Consensus       541 vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~--~~~~il~---------------~~~~~p~~~  603 (669)
T cd05610         541 LGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQ--VFQNILN---------------RDIPWPEGE  603 (669)
T ss_pred             eeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHh---------------cCCCCCccc
Confidence            34789999999998899999999999999999999999996432111  1111111               111001111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ......+..++..||..+|.+||++.+++..
T Consensus       604 ~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h  634 (669)
T cd05610         604 EKLSVNAQNAIEILLTMDPTKRAGLKELKQH  634 (669)
T ss_pred             ccCCHHHHHHHHHHcccChhHCcCHHHHHhC
Confidence            1223456778889999999999999999874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.29  E-value=2.8e-12  Score=97.15  Aligned_cols=106  Identities=9%  Similarity=-0.054  Sum_probs=65.0

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchh-------hhhccc
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVK-------EWMDEI   92 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~d~~   92 (160)
                      .++.|+|||.+....++.++||||+||+++|+++|.+||...... ....+........   .....       ....+.
T Consensus       169 ~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  245 (288)
T cd07863         169 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP---EDDWPRDVTLPRGAFSPR  245 (288)
T ss_pred             ccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCC---hhhCcccccccccccCCC
Confidence            356799999999889999999999999999999999998643221 1111111111000   00000       000000


Q ss_pred             cC--CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           93 LL--QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        93 l~--~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ..  ...........+.+++.+|++.||.+||++.+++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         246 GPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             CCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            00  00000122345678999999999999999998874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.28  E-value=1.3e-12  Score=98.82  Aligned_cols=93  Identities=16%  Similarity=0.120  Sum_probs=62.0

Q ss_pred             CCCCcchhhHhhh-----cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           21 KRPSMVDIVYALS-----KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        21 ~~~~y~aPE~~~~-----~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      +.+.|+|||++..     ..++.++||||+|++++|+++|+.|+.....  ...+.....            ...+.+  
T Consensus       186 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~--~~~~~~~~~------------~~~~~~--  249 (286)
T cd06638         186 GTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP--MRALFKIPR------------NPPPTL--  249 (286)
T ss_pred             CCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch--hHHHhhccc------------cCCCcc--
Confidence            4578999998753     4478899999999999999999999863211  000000000            000111  


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                       ..+......+..++.+||+.+|.+||++.+|++.
T Consensus       250 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         250 -HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             -cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence             1111122457889999999999999999999874

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.28  E-value=1.2e-12  Score=112.53  Aligned_cols=88  Identities=16%  Similarity=0.191  Sum_probs=60.3

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .++.|||||++....++.++|||||||+++||++|..|+.......     ..+.          ...+.+..      .
T Consensus       177 gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~-----~~~~----------~~~~~~~~------~  235 (793)
T PLN00181        177 EMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTM-----SSLR----------HRVLPPQI------L  235 (793)
T ss_pred             CCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHH-----HHHH----------HhhcChhh------h
Confidence            3456999999999999999999999999999999888864211100     0010          00111111      1


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ........++..||+++|.+||++.+|++
T Consensus       236 ~~~~~~~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        236 LNWPKEASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             hcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence            11223457778899999999999999975

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.28  E-value=2.2e-12  Score=96.06  Aligned_cols=92  Identities=15%  Similarity=0.183  Sum_probs=66.1

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+.+.|+|||...+..++.++|+||||++++|+++|..|+......  ........               ...  ...+
T Consensus       162 ~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~--~~~~~~~~---------------~~~--~~~~  222 (256)
T cd08221         162 VGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL--NLVVKIVQ---------------GNY--TPVV  222 (256)
T ss_pred             CCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHc---------------CCC--CCCc
Confidence            3467899999998888899999999999999999999998632211  11111111               111  1112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ......+..++..||..+|.+||++.+++..
T Consensus       223 ~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         223 SVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             cccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            2234567889999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.28  E-value=4.5e-12  Score=94.56  Aligned_cols=94  Identities=14%  Similarity=0.158  Sum_probs=63.3

Q ss_pred             CCCCCcchhhHhhhcC---CcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCC
Q 047377           20 SKRPSMVDIVYALSKS---DDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~---~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      ...+.|++||++....   ++.++||||||++++++++|..||..... ..... ....           ....+.+   
T Consensus       164 ~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~-~~~~~-~~~~-----------~~~~~~~---  227 (264)
T cd06626         164 AGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDN-EFQIM-FHVG-----------AGHKPPI---  227 (264)
T ss_pred             cCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcc-hHHHH-HHHh-----------cCCCCCC---
Confidence            3457899999998766   88999999999999999999999863211 11110 0110           0001111   


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +........+.+++.+||+.+|.+||++.+++.
T Consensus       228 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         228 PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             CcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            111112345678899999999999999998864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.28  E-value=3.9e-12  Score=99.44  Aligned_cols=90  Identities=14%  Similarity=0.077  Sum_probs=63.5

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||++....++.++|||||||+++||++|..||..........  ....               ...   .+|
T Consensus       189 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~--~i~~---------------~~~---~~p  248 (340)
T PTZ00426        189 CGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQ--KILE---------------GII---YFP  248 (340)
T ss_pred             cCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHH--HHhc---------------CCC---CCC
Confidence            35678999999988889999999999999999999999997433211111  1111               110   112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRP-----SMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~  129 (160)
                      ......+..++.+|++.+|.+|+     ++.++++
T Consensus       249 ~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~  283 (340)
T PTZ00426        249 KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE  283 (340)
T ss_pred             CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence            22223457889999999999995     7777765

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.27  E-value=9.6e-13  Score=98.64  Aligned_cols=95  Identities=14%  Similarity=0.119  Sum_probs=61.4

Q ss_pred             CCCCcchhhHhh---hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           21 KRPSMVDIVYAL---SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        21 ~~~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..+.|+|||.+.   ...++.++|+||||++++|+++|..|+..... . ... ..+.      .   .....+..   .
T Consensus       168 ~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~-~-~~~-~~~~------~---~~~~~~~~---~  232 (267)
T cd06646         168 GTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHP-M-RAL-FLMS------K---SNFQPPKL---K  232 (267)
T ss_pred             cCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccch-h-hhh-eeee------c---CCCCCCCC---c
Confidence            346899999874   34578899999999999999999999852110 0 000 0000      0   00000111   0


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ........+.+++.+||..+|.+||++.+|++.
T Consensus       233 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  265 (267)
T cd06646         233 DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH  265 (267)
T ss_pred             cccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence            111223567889999999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.27  E-value=2.8e-12  Score=97.42  Aligned_cols=92  Identities=14%  Similarity=0.108  Sum_probs=64.6

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +.+.|++||....+.++.++||||||++++|+++|..|+......  ........            ...+.+   ..+.
T Consensus       177 ~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~--~~~~~~~~------------~~~~~~---~~~~  239 (285)
T cd06648         177 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL--QAMKRIRD------------NLPPKL---KNLH  239 (285)
T ss_pred             CCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH--HHHHHHHh------------cCCCCC---cccc
Confidence            457899999998888999999999999999999999998632211  11111111            000111   1111


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+.+++.+||..+|.+||++.++++
T Consensus       240 ~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         240 KVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             cCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence            12346789999999999999999998885

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.27  E-value=1.2e-12  Score=101.73  Aligned_cols=87  Identities=14%  Similarity=0.143  Sum_probs=60.3

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc------hhHHHHHHHHHcCCccccccchhhhhccccC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG------KVLWAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      +++.|+|||++.+..++.++||||||++++|+++|+.||....      ......+...+              ....  
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i--------------~~~~--  221 (329)
T cd05618         158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI--------------LEKQ--  221 (329)
T ss_pred             CCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHH--------------hcCC--
Confidence            4678999999998899999999999999999999999985211      00011111111              1111  


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKRPSM  124 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~  124 (160)
                       ...|......+..++.+|++.+|++||+.
T Consensus       222 -~~~p~~~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         222 -IRIPRSLSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             -CCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence             12233334456789999999999999983

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.27  E-value=1.5e-12  Score=100.75  Aligned_cols=84  Identities=17%  Similarity=0.122  Sum_probs=60.6

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +++.|+|||++....++.++||||+||+++|+++|+.||..........  ...               ...   ..++.
T Consensus       163 gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~--~i~---------------~~~---~~~~~  222 (324)
T cd05587         163 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ--SIM---------------EHN---VSYPK  222 (324)
T ss_pred             CCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH--HHH---------------cCC---CCCCC
Confidence            4688999999998889999999999999999999999997433211110  111               111   12222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSM  124 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~  124 (160)
                      .....+.+++.+|+..+|.+|++.
T Consensus       223 ~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         223 SLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             CCCHHHHHHHHHHhhcCHHHcCCC
Confidence            233456789999999999999975

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.27  E-value=1.3e-12  Score=105.57  Aligned_cols=105  Identities=11%  Similarity=0.073  Sum_probs=64.7

Q ss_pred             CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchh----hhhccccC-
Q 047377           22 RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVK----EWMDEILL-   94 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~d~~l~-   94 (160)
                      ++.|+|||.+.+. .++.++|||||||+++||++|..||..... .....+...+....   .....    .+.+...+ 
T Consensus       233 t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~---~~~~~~~~~~~~~~~~~~  309 (440)
T PTZ00036        233 SRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPT---EDQLKEMNPNYADIKFPD  309 (440)
T ss_pred             CcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC---HHHHHHhchhhhcccCCc
Confidence            5779999998764 689999999999999999999999974321 11111112111000   00000    00000000 


Q ss_pred             ------CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 ------QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 ------~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                            ...+|......+.+++.+||..+|.+||++.|++.
T Consensus       310 ~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~  350 (440)
T PTZ00036        310 VKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA  350 (440)
T ss_pred             cCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence                  01112223356789999999999999999999874

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.27  E-value=3.8e-12  Score=97.62  Aligned_cols=92  Identities=16%  Similarity=0.103  Sum_probs=63.1

Q ss_pred             CCCCcchhhHhh---hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           21 KRPSMVDIVYAL---SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        21 ~~~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..+.|+|||.+.   .+.++.++||||||++++|+++|..|+..........  ....       .     ..+.+    
T Consensus       173 ~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~--~~~~-------~-----~~~~~----  234 (307)
T cd06607         173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY--HIAQ-------N-----DSPTL----  234 (307)
T ss_pred             CCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHH--HHhc-------C-----CCCCC----
Confidence            346899999874   4568899999999999999999999985322111100  1110       0     00111    


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .+......+..++.+||..+|++||++.+|+..
T Consensus       235 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         235 SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            122334567899999999999999999999763

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.27  E-value=1.2e-12  Score=99.03  Aligned_cols=96  Identities=13%  Similarity=0.133  Sum_probs=64.1

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCch----hHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGK----VLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      ...+.|+|||++....++.++|+||||++++++++|+.||.....    .........+.           ....+.++.
T Consensus       154 ~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~  222 (279)
T cd06619         154 VGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIV-----------DEDPPVLPV  222 (279)
T ss_pred             CCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHh-----------ccCCCCCCC
Confidence            345689999999888899999999999999999999999862110    00000001110           000111101


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ..+    ...+.+++.+|++.+|.+||++.+++..
T Consensus       223 ~~~----~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         223 GQF----SEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             CcC----CHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            112    2356788999999999999999998763

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.27  E-value=3e-12  Score=98.71  Aligned_cols=97  Identities=14%  Similarity=0.055  Sum_probs=65.7

Q ss_pred             CCCCcchhhHhh---hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           21 KRPSMVDIVYAL---SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        21 ~~~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..+.|+|||++.   .+.++.++||||||++++|+++|..|+..........  ....               ... ...
T Consensus       183 ~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~--~~~~---------------~~~-~~~  244 (317)
T cd06635         183 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY--HIAQ---------------NES-PTL  244 (317)
T ss_pred             CCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHH--HHHh---------------ccC-CCC
Confidence            346899999974   4578899999999999999999999986322111000  1111               111 011


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      ........+..++.+||+.+|.+||++.+|+..+-...
T Consensus       245 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~  282 (317)
T cd06635         245 QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR  282 (317)
T ss_pred             CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence            11122345688999999999999999999998655443

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.27  E-value=2.9e-12  Score=99.23  Aligned_cols=39  Identities=15%  Similarity=0.132  Sum_probs=34.7

Q ss_pred             CCCcchhhHhhh--cCCcccCccCCCeeehhhhhhCCCCCC
Q 047377           22 RPSMVDIVYALS--KSDDLLSDISDDALSSSQLISGEKAID   60 (160)
Q Consensus        22 ~~~y~aPE~~~~--~~~s~ksDv~s~Gvvl~elltg~~p~~   60 (160)
                      ...|+|||++..  ..++.++|||||||+++|+++|+.||.
T Consensus       171 ~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  211 (327)
T cd08227         171 VLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK  211 (327)
T ss_pred             eecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence            356999999876  358899999999999999999999996

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.26  E-value=2.4e-12  Score=97.87  Aligned_cols=92  Identities=16%  Similarity=0.153  Sum_probs=63.2

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhH-HHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVL-WAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      +.+.|+|||.+..+.++.++||||||++++++++|..||....... ........               +. . ...++
T Consensus       163 g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~---------------~~-~-~~~~~  225 (285)
T cd05630         163 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLV---------------KE-V-QEEYS  225 (285)
T ss_pred             CCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhh---------------hh-h-hhhcC
Confidence            4578999999998899999999999999999999999997322111 01100111               00 0 01111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPS-----MVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs-----~~ev~~  129 (160)
                      ......+.+++..||+.+|.+||+     +.+++.
T Consensus       226 ~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         226 EKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             ccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            122345678899999999999999     677765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.26  E-value=4.4e-12  Score=93.39  Aligned_cols=92  Identities=18%  Similarity=0.127  Sum_probs=63.5

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ....|++||.+....++.++|+||||++++++++|+.|+..........  ...       .     ...+.+   ..+.
T Consensus       159 ~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~-------~-----~~~~~~---~~~~  221 (253)
T cd05122         159 GTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF--KIA-------T-----NGPPGL---RNPE  221 (253)
T ss_pred             cCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH--HHH-------h-----cCCCCc---Cccc
Confidence            3468999999988889999999999999999999999986321100000  000       0     000111   0111


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+.+++..||+.+|.+||++.++++
T Consensus       222 ~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         222 KWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             ccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            11356788999999999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.26  E-value=1.8e-12  Score=100.38  Aligned_cols=87  Identities=16%  Similarity=0.071  Sum_probs=60.9

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +++.|+|||.+..+.++.++|||||||+++||++|..||.......  .......       .      ...+ ...   
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~--~~~~~~~-------~------~~~~-~~~---  218 (325)
T cd05604         158 GTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE--MYDNILH-------K------PLVL-RPG---  218 (325)
T ss_pred             CChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH--HHHHHHc-------C------CccC-CCC---
Confidence            4578999999999899999999999999999999999996332111  1111111       0      0011 111   


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDI  127 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev  127 (160)
                       ....+.+++.+|++.+|.+||++.+.
T Consensus       219 -~~~~~~~ll~~ll~~~p~~R~~~~~~  244 (325)
T cd05604         219 -ASLTAWSILEELLEKDRQRRLGAKED  244 (325)
T ss_pred             -CCHHHHHHHHHHhccCHHhcCCCCCC
Confidence             22455788899999999999987543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.26  E-value=1.6e-12  Score=97.87  Aligned_cols=93  Identities=15%  Similarity=0.128  Sum_probs=64.7

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|++||.+..+..+.++||||||++++++++ |..||......  .. .....      .        ..+ ....+..
T Consensus       182 ~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--~~-~~~~~------~--------~~~-~~~~~~~  243 (275)
T cd05046         182 LRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--EV-LNRLQ------A--------GKL-ELPVPEG  243 (275)
T ss_pred             EeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--HH-HHHHH------c--------CCc-CCCCCCC
Confidence            45999999988888999999999999999998 77787521110  01 01110      0        000 0011112


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      ....+..++.+||+.+|.+||++.+++..|++
T Consensus       244 ~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~  275 (275)
T cd05046         244 CPSRLYKLMTRCWAVNPKDRPSFSELVSALGE  275 (275)
T ss_pred             CCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence            23467889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.26  E-value=8.6e-12  Score=93.13  Aligned_cols=91  Identities=22%  Similarity=0.157  Sum_probs=65.9

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+.+.|++||......++.++|+||||++++++++|..|+.....  .........               ..  ....+
T Consensus       166 ~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~--~~~~~~~~~---------------~~--~~~~~  226 (260)
T cd08222         166 TGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF--LSVVLRIVE---------------GP--TPSLP  226 (260)
T ss_pred             CCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHc---------------CC--CCCCc
Confidence            345689999999888889999999999999999999999863221  111111111               11  11223


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+||..+|.+||++.++++
T Consensus       227 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         227 ETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             chhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence            344456788999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.26  E-value=2.3e-12  Score=98.56  Aligned_cols=93  Identities=14%  Similarity=0.049  Sum_probs=64.8

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ..++.|++||......++.++|+||||++++++++|..||..........  ....              .... ....+
T Consensus       176 ~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~--~~~~--------------~~~~-~~~~~  238 (297)
T cd06656         176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY--LIAT--------------NGTP-ELQNP  238 (297)
T ss_pred             cCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee--eecc--------------CCCC-CCCCc
Confidence            34578999999988889999999999999999999999986322100000  0000              0000 11122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+||..+|.+||++.+|+.
T Consensus       239 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         239 ERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            233345678899999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.26  E-value=3.6e-12  Score=106.69  Aligned_cols=98  Identities=13%  Similarity=0.057  Sum_probs=75.2

Q ss_pred             cCCCCCCCcchhhHh---hhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhcccc
Q 047377           17 KDPSKRPSMVDIVYA---LSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEIL   93 (160)
Q Consensus        17 ~~~~~~~~y~aPE~~---~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l   93 (160)
                      ...+++|.|.+||.+   .+..+++|+|||++||+||-|.....||...+.                     ..++....
T Consensus       213 I~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~---------------------laIlng~Y  271 (738)
T KOG1989|consen  213 IEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK---------------------LAILNGNY  271 (738)
T ss_pred             HHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc---------------------eeEEeccc
Confidence            345678999999986   345789999999999999999999999974322                     11222222


Q ss_pred             CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           94 LQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        94 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                       ..+-.......+..|+..||+.+|.+||++-+|+..+..+..
T Consensus       272 -~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~  313 (738)
T KOG1989|consen  272 -SFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN  313 (738)
T ss_pred             -cCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence             112223556778899999999999999999999999988876

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.26  E-value=5.9e-12  Score=94.58  Aligned_cols=96  Identities=18%  Similarity=0.158  Sum_probs=63.7

Q ss_pred             CCCCcchhhHhhhcC--CcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           21 KRPSMVDIVYALSKS--DDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~--~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ....|++||......  ++.++|+||+|++++|+++|..|+......  ........       ......+...     .
T Consensus       172 ~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~-------~~~~~~~~~~-----~  237 (272)
T cd06629         172 GSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI--AAMFKLGN-------KRSAPPIPPD-----V  237 (272)
T ss_pred             CCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH--HHHHHhhc-------cccCCcCCcc-----c
Confidence            456899999987654  789999999999999999999998522211  11111111       0000011111     1


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .......+.+++..||..+|.+||++.+|++.
T Consensus       238 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         238 SMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             cccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            11234567889999999999999999998763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.26  E-value=5.7e-12  Score=93.17  Aligned_cols=93  Identities=18%  Similarity=0.174  Sum_probs=66.9

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ...+.|++||.......+.++||||||++++++++|..|+..... ....+....               .... ....+
T Consensus       164 ~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~---------------~~~~-~~~~~  226 (260)
T cd06606         164 RGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN-PMAALYKIG---------------SSGE-PPEIP  226 (260)
T ss_pred             CCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-hHHHHHhcc---------------ccCC-CcCCC
Confidence            345689999999888899999999999999999999999864331 111101111               0111 12233


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+|+..+|.+||++.+++.
T Consensus       227 ~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         227 EHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             cccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            333567788999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.25  E-value=8e-12  Score=96.01  Aligned_cols=93  Identities=15%  Similarity=0.074  Sum_probs=63.2

Q ss_pred             CCCCcchhhHhh---hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           21 KRPSMVDIVYAL---SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        21 ~~~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..+.|+|||.+.   .+.++.++||||||++++++++|..|+..........  ....       ..     .+..    
T Consensus       173 ~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~--~~~~-------~~-----~~~~----  234 (308)
T cd06634         173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY--HIAQ-------NE-----SPAL----  234 (308)
T ss_pred             CCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHH--HHhh-------cC-----CCCc----
Confidence            457899999975   3567889999999999999999999975322111111  1111       00     0111    


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAV  131 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L  131 (160)
                      ........+..++.+||..+|.+||++.+++...
T Consensus       235 ~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~  268 (308)
T cd06634         235 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR  268 (308)
T ss_pred             CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence            1112335568899999999999999999998754

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.25  E-value=5.7e-12  Score=98.84  Aligned_cols=110  Identities=15%  Similarity=0.097  Sum_probs=65.8

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCcccc----ccchhhhhcc--cc
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRK----VKRVKEWMDE--IL   93 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~d~--~l   93 (160)
                      .++.|+|||.+.+..++.++||||+|++++++++|+.||..... ..+..+...+.....+.    ...+......  ..
T Consensus       184 ~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (359)
T cd07876         184 VTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQY  263 (359)
T ss_pred             ccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCC
Confidence            35789999999988999999999999999999999999973321 11111111110000000    0000000000  00


Q ss_pred             C---------------CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           94 L---------------QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        94 ~---------------~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .               ...........+.+++.+|+..||++||++.|++..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  315 (359)
T cd07876         264 PGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH  315 (359)
T ss_pred             CCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence            0               000001123456889999999999999999999873

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.25  E-value=1.1e-11  Score=93.25  Aligned_cols=97  Identities=9%  Similarity=0.080  Sum_probs=61.7

Q ss_pred             CCCCcchhhHhhh-------cCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccc
Q 047377           21 KRPSMVDIVYALS-------KSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEI   92 (160)
Q Consensus        21 ~~~~y~aPE~~~~-------~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   92 (160)
                      ..+.|+|||+...       ..++.++||||||++++|+++ |..|+......  ..+...+.       .......++.
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~--~~~~~~~~-------~~~~~~~~~~  233 (268)
T cd05086         163 VPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR--EVLNHVIK-------DQQVKLFKPQ  233 (268)
T ss_pred             CcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHh-------hcccccCCCc
Confidence            3468999998743       235689999999999999997 56677532211  11112221       1112223333


Q ss_pred             cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 047377           93 LLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVS  132 (160)
Q Consensus        93 l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~  132 (160)
                      + ...+.    ..+.+++..|| .+|++||++.+|++.|.
T Consensus       234 ~-~~~~~----~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         234 L-ELPYS----ERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             c-CCCCc----HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            3 22223    34566778899 57999999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.25  E-value=3.2e-12  Score=97.94  Aligned_cols=97  Identities=8%  Similarity=-0.046  Sum_probs=66.3

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+.+.|+|||++..+.++.++|+||||++++|+++|..||..........  ....       .   ....+.. .    
T Consensus       177 ~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~--~~~~-------~---~~~~~~~-~----  239 (305)
T cd05609         177 CGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG--QVIS-------D---DIEWPEG-D----  239 (305)
T ss_pred             ccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHh-------c---ccCCCCc-c----
Confidence            34568999999988889999999999999999999999986322111100  1110       0   0001111 1    


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      ......+..++.+||+.+|.+||++.++.+.|+.
T Consensus       240 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         240 EALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             ccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence            1223456899999999999999997766666665

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.25  E-value=6.7e-12  Score=94.86  Aligned_cols=108  Identities=13%  Similarity=0.059  Sum_probs=64.6

Q ss_pred             CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhHH-HHHHHHHcCCc--------ccccc---chhhh
Q 047377           22 RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVLW-AKVEGILEGNE--------GRKVK---RVKEW   88 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~-~~~~~~~~~~~--------~~~~~---~~~~~   88 (160)
                      .+.|+|||++... .++.++||||||++++++++|..|+........ ......+....        .+...   .....
T Consensus       164 ~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (288)
T cd07833         164 TRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEP  243 (288)
T ss_pred             ccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCC
Confidence            4679999999888 788999999999999999999999863322110 00001110000        00000   00000


Q ss_pred             hccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           89 MDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        89 ~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .++......++......+.+++.+||..+|.+||++++++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         244 SQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             CCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence            00000000112223567889999999999999999998875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.25  E-value=4.4e-12  Score=94.49  Aligned_cols=92  Identities=22%  Similarity=0.244  Sum_probs=65.5

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ....|++||....+.++.++|+||||++++++++|..|+..... ..........               ...  ....+
T Consensus       162 ~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~---------------~~~--~~~~~  224 (264)
T cd06623         162 GTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC---------------DGP--PPSLP  224 (264)
T ss_pred             ecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh---------------cCC--CCCCC
Confidence            34679999999888899999999999999999999999863321 1111111111               111  11122


Q ss_pred             HH-HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 ME-GVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~-~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .. ....+..++..|+..+|.+||++.++++
T Consensus       225 ~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~  255 (264)
T cd06623         225 AEEFSPEFRDFISACLQKDPKKRPSAAELLQ  255 (264)
T ss_pred             cccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            22 3456788999999999999999999987

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.25  E-value=6.4e-12  Score=99.38  Aligned_cols=92  Identities=16%  Similarity=0.110  Sum_probs=67.8

Q ss_pred             CCCCCCCcchhhHhhhcC-Cc-ccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           18 DPSKRPSMVDIVYALSKS-DD-LLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        18 ~~~~~~~y~aPE~~~~~~-~s-~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      ..++.|.|+|||.+.+.. |+ .++||||+||+++-|++|..||+.........  ....               ...  
T Consensus       180 t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~--ki~~---------------~~~--  240 (370)
T KOG0583|consen  180 TFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYR--KIRK---------------GEF--  240 (370)
T ss_pred             CCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHH--HHhc---------------CCc--
Confidence            445668999999998877 76 78999999999999999999997432211111  1111               111  


Q ss_pred             CCCCHHH-HHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSISMEG-VMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~~~~-~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       .+|... ...+..++.+|+..+|.+|+++.+|+.
T Consensus       241 -~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  241 -KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE  274 (370)
T ss_pred             -cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence             233333 567789999999999999999999983

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.25  E-value=4.2e-12  Score=99.39  Aligned_cols=110  Identities=15%  Similarity=0.065  Sum_probs=66.4

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCcccc----ccchhhhhccc---
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRK----VKRVKEWMDEI---   92 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~d~~---   92 (160)
                      .++.|+|||.+.+..++.++||||||++++|+++|+.||..... ..+..+...+.....+.    ......+++..   
T Consensus       180 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (355)
T cd07874         180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY  259 (355)
T ss_pred             ccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCcc
Confidence            45789999999888899999999999999999999999974321 11111111110000000    00000111000   


Q ss_pred             ------------cCC--CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           93 ------------LLQ--DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        93 ------------l~~--~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                                  +..  ...+......+.+++.+|++.||.+||++.|+++.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         260 AGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             ccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence                        000  00111123456889999999999999999999874

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.25  E-value=5e-12  Score=97.68  Aligned_cols=85  Identities=15%  Similarity=0.087  Sum_probs=60.8

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +++.|+|||.+....++.++|||||||+++|+++|..||..........  ....               ..+   ..+.
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~--~i~~---------------~~~---~~~~  217 (321)
T cd05603         158 GTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYD--NILH---------------KPL---QLPG  217 (321)
T ss_pred             CCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHH--HHhc---------------CCC---CCCC
Confidence            4578999999988889999999999999999999999996433111111  1111               111   1222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMV  125 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~  125 (160)
                      .....+.+++.+|++.+|.+||+..
T Consensus       218 ~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         218 GKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             CCCHHHHHHHHHHccCCHhhcCCCC
Confidence            2234567899999999999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.25  E-value=2.7e-12  Score=98.68  Aligned_cols=90  Identities=16%  Similarity=0.082  Sum_probs=62.5

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ++.|++||.+.+..++.++||||||++++++++|..||......  .......               +... .......
T Consensus       195 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~--~~~~~~~---------------~~~~-~~~~~~~  256 (316)
T cd05574         195 TEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD--ETFSNIL---------------KKEV-TFPGSPP  256 (316)
T ss_pred             ccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchH--HHHHHHh---------------cCCc-cCCCccc
Confidence            46799999999888999999999999999999999998633211  1101111               1111 1011111


Q ss_pred             HHHHHHHHHHHccccCCCCCCC----HHHHHH
Q 047377          102 GVMRAMGIAIACLHKDPSKRPS----MVDIVH  129 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs----~~ev~~  129 (160)
                      ....+.+++.+|+..+|.+||+    +.+++.
T Consensus       257 ~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         257 VSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             cCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence            3456789999999999999999    555554

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.25  E-value=9.7e-12  Score=97.69  Aligned_cols=111  Identities=15%  Similarity=0.062  Sum_probs=66.4

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCcccc----ccchhhhhccc--
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRK----VKRVKEWMDEI--   92 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~d~~--   92 (160)
                      ..++.|+|||++.+..++.++|||||||+++|+++|+.||..... ..+..+...+.....+.    ...+...+..+  
T Consensus       186 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (364)
T cd07875         186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPK  265 (364)
T ss_pred             cccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCC
Confidence            345789999999998999999999999999999999999974321 11111111110000000    00000000000  


Q ss_pred             ------------c-CC--CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           93 ------------L-LQ--DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        93 ------------l-~~--~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                                  . ..  ..........+.+++.+|++.||.+||++.++++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         266 YAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             cCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence                        0 00  00000112356789999999999999999999773

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.25  E-value=5.1e-12  Score=96.70  Aligned_cols=93  Identities=12%  Similarity=0.061  Sum_probs=64.2

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ..+.|+|||++....++.++||||||++++|+++|..||......  ... ..+.      ..     ..+..   ....
T Consensus       179 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~-~~~~------~~-----~~~~~---~~~~  241 (297)
T cd06659         179 GTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAM-KRLR------DS-----PPPKL---KNAH  241 (297)
T ss_pred             cCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHH-HHHh------cc-----CCCCc---cccC
Confidence            457899999998888999999999999999999999998632211  110 1111      00     00000   1111


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .....+..++..||+.+|.+||++.++++.
T Consensus       242 ~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         242 KISPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             CCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            122346788999999999999999999883

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.25  E-value=3.6e-12  Score=96.22  Aligned_cols=91  Identities=18%  Similarity=0.160  Sum_probs=65.1

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ....|++||......++.++|+||||++++++++|..|+.........   ..+.               ... ....+.
T Consensus       163 ~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~---~~~~---------------~~~-~~~~~~  223 (277)
T cd06641         163 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVL---FLIP---------------KNN-PPTLEG  223 (277)
T ss_pred             CCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHH---HHHh---------------cCC-CCCCCc
Confidence            456799999998888999999999999999999999998632211111   1111               000 111222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .....+.+++.+||+.+|.+||++.+++..
T Consensus       224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         224 NYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            233556889999999999999999999884

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.25  E-value=4.8e-12  Score=96.58  Aligned_cols=93  Identities=15%  Similarity=0.072  Sum_probs=64.6

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ..+.|++||.+..+.++.++|+||||++++++++|+.||.......  .+.....              .+.. ....+.
T Consensus       177 ~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~--~~~~~~~--------------~~~~-~~~~~~  239 (293)
T cd06647         177 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR--ALYLIAT--------------NGTP-ELQNPE  239 (293)
T ss_pred             CChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh--heeehhc--------------CCCC-CCCCcc
Confidence            3457999999988889999999999999999999999996322100  0000000              0010 111122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .....+..++.+||..+|.+||++.+++..
T Consensus       240 ~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         240 KLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            233457789999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.24  E-value=4.4e-12  Score=95.02  Aligned_cols=95  Identities=16%  Similarity=0.119  Sum_probs=61.3

Q ss_pred             CCCCCcchhhHhh---hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCC
Q 047377           20 SKRPSMVDIVYAL---SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        20 ~~~~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      ...+.|+|||++.   .+.++.++|+||+|++++++++|..|+..........  ....       .   ....+.. ..
T Consensus       167 ~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~--~~~~-------~---~~~~~~~-~~  233 (267)
T cd06645         167 IGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF--LMTK-------S---NFQPPKL-KD  233 (267)
T ss_pred             cCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH--hhhc-------c---CCCCCcc-cc
Confidence            3457899999874   4568899999999999999999999975222111000  1110       0   0000111 00


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                        .......+.+++.+|+..+|++||++.+|++
T Consensus       234 --~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         234 --KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             --cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence              0011235678999999999999999998875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.24  E-value=9.4e-12  Score=94.51  Aligned_cols=99  Identities=14%  Similarity=0.116  Sum_probs=65.1

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCch--hHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGK--VLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ....|++||.+....++.++||||+|++++++++|..|+.....  .........+.      .... ..+....   ..
T Consensus       165 ~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~---~~  234 (287)
T cd06621         165 GTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIV------NMPN-PELKDEP---GN  234 (287)
T ss_pred             CCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHh------cCCc-hhhccCC---CC
Confidence            45689999999888999999999999999999999999873311  00011111111      0000 0000010   00


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .......+.+++.+||+.+|.+||++.||+.
T Consensus       235 ~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         235 GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             CCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            0112346789999999999999999999887

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.24  E-value=2.1e-12  Score=98.46  Aligned_cols=93  Identities=16%  Similarity=0.138  Sum_probs=62.1

Q ss_pred             CCCcchhhHhhhcC----CcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           22 RPSMVDIVYALSKS----DDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        22 ~~~y~aPE~~~~~~----~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      .+.|+|||.+....    ++.++||||||++++++++|+.||..... ..........      ..      .+.+   .
T Consensus       177 ~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~------~~------~~~~---~  240 (296)
T cd06618         177 CAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT-EFEVLTKILQ------EE------PPSL---P  240 (296)
T ss_pred             CccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh-HHHHHHHHhc------CC------CCCC---C
Confidence            46899999986543    78899999999999999999999863111 1111111121      00      0111   1


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ........+.+++.+||..+|.+||++.+++..
T Consensus       241 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         241 PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            111123457889999999999999999988753

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.24  E-value=3.1e-12  Score=97.32  Aligned_cols=92  Identities=17%  Similarity=0.127  Sum_probs=61.5

Q ss_pred             CCCCcchhhHhh-----hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           21 KRPSMVDIVYAL-----SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        21 ~~~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      ..+.|++||++.     ...++.++|+||||++++|+++|..|+.....  .........            ...+.+  
T Consensus       172 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~~~~~~~~~------------~~~~~~--  235 (292)
T cd06644         172 GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP--MRVLLKIAK------------SEPPTL--  235 (292)
T ss_pred             CCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH--HHHHHHHhc------------CCCccC--
Confidence            346899999874     34467899999999999999999999853221  111111111            000111  


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       ..+......+.+++.+||..+|++||++.++++
T Consensus       236 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         236 -SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             -CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence             112223345688999999999999999999875

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.24  E-value=9.1e-12  Score=93.08  Aligned_cols=87  Identities=15%  Similarity=0.090  Sum_probs=61.5

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ..+.|++||.+....++.++|+||+|++++++++|..|+.............               ..+... ...++.
T Consensus       154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---------------~~~~~~-~~~~~~  217 (262)
T cd05572         154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYND---------------ILKGNG-KLEFPN  217 (262)
T ss_pred             CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHH---------------HhccCC-CCCCCc
Confidence            4578999999888889999999999999999999999986332111111111               111111 223333


Q ss_pred             HHHHHHHHHHHHccccCCCCCCC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPS  123 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs  123 (160)
                      .....+..++.+||..+|.+||+
T Consensus       218 ~~~~~~~~~i~~~l~~~p~~R~~  240 (262)
T cd05572         218 YIDKAAKDLIKQLLRRNPEERLG  240 (262)
T ss_pred             ccCHHHHHHHHHHccCChhhCcC
Confidence            33567789999999999999999

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.24  E-value=3.9e-12  Score=94.65  Aligned_cols=90  Identities=18%  Similarity=0.206  Sum_probs=62.2

Q ss_pred             CCCcchhhHhhhc--CCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           22 RPSMVDIVYALSK--SDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        22 ~~~y~aPE~~~~~--~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+.|+|||++...  .++.++||||||++++|+++ |..|+.........   ..+              ....    ..
T Consensus       167 ~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~---~~~--------------~~~~----~~  225 (259)
T cd05037         167 RIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKE---RFY--------------QDQH----RL  225 (259)
T ss_pred             CCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHH---HHH--------------hcCC----CC
Confidence            4679999998776  78999999999999999998 46666421110000   111              0011    01


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVS  132 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~  132 (160)
                      +......+.+++.+||..+|.+||++.+|++.|+
T Consensus       226 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         226 PMPDCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             CCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            1111156788999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.24  E-value=5.1e-12  Score=96.48  Aligned_cols=93  Identities=15%  Similarity=0.128  Sum_probs=64.3

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +.+.|+|||......++.++|+||||++++|+++|..|+......  ..+ ..+.           ..+.+.+ ..  ..
T Consensus       180 ~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~-~~~~-----------~~~~~~~-~~--~~  242 (292)
T cd06658         180 GTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL--QAM-RRIR-----------DNLPPRV-KD--SH  242 (292)
T ss_pred             cCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHH-HHHH-----------hcCCCcc-cc--cc
Confidence            456899999998888999999999999999999999998632211  110 1110           1111111 11  11


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .....+..++..|+..+|.+||++.++++.
T Consensus       243 ~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         243 KVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             ccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            122356788899999999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.24  E-value=6.9e-12  Score=95.31  Aligned_cols=92  Identities=14%  Similarity=0.072  Sum_probs=62.8

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHH-HHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLW-AKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      +.+.|+|||.+.+..++.++|+||||++++|+++|..||........ ..+.....              ...   ..++
T Consensus       163 g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~--------------~~~---~~~~  225 (285)
T cd05632         163 GTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVL--------------ETE---EVYS  225 (285)
T ss_pred             CCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhh--------------ccc---cccC
Confidence            45789999999888999999999999999999999999963321111 11111110              000   1112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPS-----MVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs-----~~ev~~  129 (160)
                      ......+.+++..|++.+|++||+     +.+++.
T Consensus       226 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         226 AKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             ccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence            222345678899999999999999     555554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.24  E-value=4.2e-12  Score=95.88  Aligned_cols=92  Identities=18%  Similarity=0.187  Sum_probs=61.8

Q ss_pred             CCCCcchhhHhhh-----cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           21 KRPSMVDIVYALS-----KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        21 ~~~~y~aPE~~~~-----~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      ..+.|++||.+..     ..++.++|+||||++++|+++|..|+......  ..+.....       .     ..+.+  
T Consensus       165 ~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~-------~-----~~~~~--  228 (280)
T cd06611         165 GTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM--RVLLKILK-------S-----EPPTL--  228 (280)
T ss_pred             cchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH--HHHHHHhc-------C-----CCCCc--
Confidence            3567999998753     34678999999999999999999998632211  11111111       0     00111  


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       ..+......+.+++.+||+.+|.+||++.+|++
T Consensus       229 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (280)
T cd06611         229 -DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK  261 (280)
T ss_pred             -CCcccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence             112223345678999999999999999999866

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.24  E-value=2.3e-12  Score=100.04  Aligned_cols=92  Identities=15%  Similarity=0.181  Sum_probs=62.8

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc------hhHHHHHHHHHcCCccccccchhhhhccccC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG------KVLWAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      +++.|+|||++.+..++.++|+||||++++|+++|+.||....      ..........+              ..... 
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~--------------~~~~~-  222 (329)
T cd05588         158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVI--------------LEKQI-  222 (329)
T ss_pred             CCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHH--------------HcCCC-
Confidence            4678999999998899999999999999999999999996211      00111111111              11111 


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCC------HHHHHH
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKRPS------MVDIVH  129 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs------~~ev~~  129 (160)
                        ..|......+..++.+|++.+|.+|++      +.+++.
T Consensus       223 --~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         223 --RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             --CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence              122223345688999999999999997      566653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.23  E-value=1.3e-11  Score=97.73  Aligned_cols=96  Identities=14%  Similarity=0.085  Sum_probs=61.6

Q ss_pred             CCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccC-CC
Q 047377           18 DPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILL-QD   96 (160)
Q Consensus        18 ~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~-~~   96 (160)
                      ...+++.|+|||.+....++.++|||||||+++||++|..||..........  ....      ..   .  ....+ ..
T Consensus       207 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~--~i~~------~~---~--~~~~~~~~  273 (381)
T cd05626         207 SLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQL--KVIN------WE---N--TLHIPPQV  273 (381)
T ss_pred             cccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHH--HHHc------cc---c--ccCCCCCC
Confidence            3456789999999988889999999999999999999999997432111111  1110      00   0  00110 01


Q ss_pred             CCCHHHHHHHHHHHHH--ccccCCCCCCCHHHHHHH
Q 047377           97 SISMEGVMRAMGIAIA--CLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~--C~~~~p~~RPs~~ev~~~  130 (160)
                      .++.    .+.+++.+  |+..++..|+++.+++..
T Consensus       274 ~~s~----~~~dli~~ll~~~~~~~~R~~~~~~l~h  305 (381)
T cd05626         274 KLSP----EAVDLITKLCCSAEERLGRNGADDIKAH  305 (381)
T ss_pred             CCCH----HHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            1222    33445444  777788889999999763

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.23  E-value=5.8e-12  Score=94.04  Aligned_cols=97  Identities=15%  Similarity=0.036  Sum_probs=64.9

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..+.+.|++||...++.++.++||||||++++++++|..|+.........   ..+.      ...      ... ....
T Consensus       153 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~---~~~~------~~~------~~~-~~~~  216 (260)
T cd05611         153 FVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVF---DNIL------SRR------INW-PEEV  216 (260)
T ss_pred             CCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHH---HHHH------hcc------cCC-CCcc
Confidence            34567899999998888899999999999999999999999633221111   1111      000      000 0011


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAV  131 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L  131 (160)
                      .......+.+++.+||+.+|++||++.++.+.|
T Consensus       217 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l  249 (260)
T cd05611         217 KEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK  249 (260)
T ss_pred             cccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence            112335678999999999999999876555444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.23  E-value=7e-12  Score=96.22  Aligned_cols=108  Identities=13%  Similarity=0.119  Sum_probs=63.5

Q ss_pred             CCCCCcchhhHhhhc--CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCc---------cccccchhh-
Q 047377           20 SKRPSMVDIVYALSK--SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNE---------GRKVKRVKE-   87 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~--~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~-   87 (160)
                      ..+..|+|||.+...  .++.++|+||||++++|+++|..||........  ......+.-         ......... 
T Consensus       169 ~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (314)
T cd08216         169 VKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM--LLEKVRGTVPCLLDKSTYPLYEDSMSQS  246 (314)
T ss_pred             cccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhccCccccccCchhhhcCCcCcc
Confidence            345679999998653  578899999999999999999999963221110  001111000         000000000 


Q ss_pred             ---hhcccc---CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           88 ---WMDEIL---LQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        88 ---~~d~~l---~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                         ..++..   ............+.+++..||..+|++||++.++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         247 RSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             cccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence               000000   001111222345778999999999999999999876

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.23  E-value=5e-12  Score=95.22  Aligned_cols=90  Identities=14%  Similarity=0.177  Sum_probs=61.7

Q ss_pred             CCCcchhhHhhhcC-CcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKS-DDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~-~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|+|||....+. ++.++|+||||++++++++|..|+......  ... ..+.           ....+.+ ...   
T Consensus       164 ~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--~~~-~~~~-----------~~~~~~~-~~~---  225 (277)
T cd06917         164 TPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF--RAM-MLIP-----------KSKPPRL-EDN---  225 (277)
T ss_pred             CcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh--hhh-hccc-----------cCCCCCC-Ccc---
Confidence            45699999987654 688999999999999999999998632210  000 0010           0001112 111   


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+.+++.+||+.+|++||++.+++.
T Consensus       226 ~~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         226 GYSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence            13356788999999999999999999976

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.23  E-value=7.1e-12  Score=97.22  Aligned_cols=87  Identities=13%  Similarity=0.068  Sum_probs=60.3

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc----hhHHHHHHHHHcCCccccccchhhhhccccCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG----KVLWAKVEGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      +++.|+|||++....++.++||||||++++|+++|+.||....    ..........+              ....   .
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~--------------~~~~---~  220 (327)
T cd05617         158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVI--------------LEKP---I  220 (327)
T ss_pred             CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHH--------------HhCC---C
Confidence            5678999999998999999999999999999999999995211    00111111111              1111   1


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCH
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPSM  124 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~  124 (160)
                      ..|......+..++.+|++.+|++|+++
T Consensus       221 ~~p~~~~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         221 RIPRFLSVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             CCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence            2222233456789999999999999974

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.22  E-value=5.1e-12  Score=97.86  Aligned_cols=84  Identities=17%  Similarity=0.146  Sum_probs=60.9

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +++.|+|||++..+.++.++||||+|++++|+++|+.||..........  ...               ....   .++.
T Consensus       163 gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~--~i~---------------~~~~---~~p~  222 (323)
T cd05615         163 GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQ--SIM---------------EHNV---SYPK  222 (323)
T ss_pred             CCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHH--HHH---------------hCCC---CCCc
Confidence            5678999999998889999999999999999999999997432211111  111               1111   2222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSM  124 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~  124 (160)
                      .....+.+++.+|++.+|.+|++.
T Consensus       223 ~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         223 SLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             cCCHHHHHHHHHHcccCHhhCCCC
Confidence            333456889999999999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.22  E-value=4e-12  Score=94.43  Aligned_cols=91  Identities=19%  Similarity=0.186  Sum_probs=63.2

Q ss_pred             CCCCcchhhHhhhcC-CcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKS-DDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~-~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ..+.|++||...... ++.++|+||||++++++++|+.||..........  ....      ..        .  ....+
T Consensus       163 ~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~------~~--------~--~~~~~  224 (258)
T cd06632         163 GSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVF--KIGR------SK--------E--LPPIP  224 (258)
T ss_pred             CCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHH--HHHh------cc--------c--CCCcC
Confidence            456799999987776 8999999999999999999999986332111111  1110      00        0  11122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+||..+|.+||++.+++.
T Consensus       225 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         225 DHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             CCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence            222345678899999999999999999875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.22  E-value=5.9e-12  Score=105.63  Aligned_cols=95  Identities=13%  Similarity=0.159  Sum_probs=75.4

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +-|||-|.++...++-+||||||||++||++| |..|+..-.                  .+.+.+.++... +...|..
T Consensus       864 ikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~------------------~~eI~dlle~ge-RLsqPpi  924 (1177)
T KOG1025|consen  864 IKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP------------------AEEIPDLLEKGE-RLSQPPI  924 (1177)
T ss_pred             cHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC------------------HHHhhHHHhccc-cCCCCCC
Confidence            46889999999999999999999999999998 999986321                  112223333222 3467777


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      +...+..++.+||..|+..||.|+++...+.+...
T Consensus       925 CtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar  959 (1177)
T KOG1025|consen  925 CTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR  959 (1177)
T ss_pred             ccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence            88889999999999999999999999998887665

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.22  E-value=1.1e-11  Score=95.97  Aligned_cols=93  Identities=9%  Similarity=0.081  Sum_probs=61.1

Q ss_pred             CCCCCcchhhHhh------hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhcccc
Q 047377           20 SKRPSMVDIVYAL------SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEIL   93 (160)
Q Consensus        20 ~~~~~y~aPE~~~------~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l   93 (160)
                      .+++.|+|||.+.      ...++.++||||||++++|+++|+.||.......  .......      ..   ..+  ..
T Consensus       164 ~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~--~~~~i~~------~~---~~~--~~  230 (330)
T cd05601         164 VGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK--TYNNIMN------FQ---RFL--KF  230 (330)
T ss_pred             cCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH--HHHHHHc------CC---Ccc--CC
Confidence            3567899999986      4567899999999999999999999996332111  1111111      00   000  00


Q ss_pred             CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           94 LQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        94 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                         +........+..++..|+. +|.+||++.+++.
T Consensus       231 ---~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         231 ---PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             ---CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence               0001122445778888997 9999999999875

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.22  E-value=1.4e-11  Score=92.82  Aligned_cols=105  Identities=11%  Similarity=-0.009  Sum_probs=64.1

Q ss_pred             CCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhhccc-cCCCC
Q 047377           21 KRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWMDEI-LLQDS   97 (160)
Q Consensus        21 ~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~-l~~~~   97 (160)
                      ..+.|+|||.+.. +.++.++||||+|++++|+++|..||..... ............    ............ .....
T Consensus       160 ~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~  235 (282)
T cd07831         160 STRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGT----PDAEVLKKFRKSRHMNYN  235 (282)
T ss_pred             CCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCC----CCHHHHHhhccccccccc
Confidence            3467999998754 4578899999999999999999999964332 111111111110    000000000000 00000


Q ss_pred             C-----------CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           98 I-----------SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        98 ~-----------~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +           .......+.+++.+||+.+|.+||++.++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         236 FPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             CcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence            0           0123467889999999999999999999876

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.22  E-value=1.8e-11  Score=94.89  Aligned_cols=104  Identities=17%  Similarity=0.192  Sum_probs=63.4

Q ss_pred             CCcchhhHhhhc--CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCcccc------ccc----------
Q 047377           23 PSMVDIVYALSK--SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRK------VKR----------   84 (160)
Q Consensus        23 ~~y~aPE~~~~~--~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~----------   84 (160)
                      ..|++||++..+  .++.++||||||++++|+++|..||.......  .....+.+....+      ...          
T Consensus       172 ~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (328)
T cd08226         172 LPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ--MLLQKLKGPPYSPLDITTFPCEESRMKNSQSG  249 (328)
T ss_pred             cCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH--HHHHHhcCCCCCCccccccchhhhhhccchhh
Confidence            459999998764  47899999999999999999999986322111  1111111000000      000          


Q ss_pred             ----h----------hhhhccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           85 ----V----------KEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        85 ----~----------~~~~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                          +          ....+..+ ....+......+.+++.+||..+|.+||++.++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~  307 (328)
T cd08226         250 VDSGIGESVVAAGMTQTMTSERL-RTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS  307 (328)
T ss_pred             hhcccccchhccccccccccccc-cchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence                0          00000111 11122234567889999999999999999999964

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.22  E-value=1.7e-11  Score=92.46  Aligned_cols=107  Identities=11%  Similarity=-0.012  Sum_probs=64.3

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCcc-cc--ccc-hhhhhccccCCC
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEG-RK--VKR-VKEWMDEILLQD   96 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~-~~--~~~-~~~~~d~~l~~~   96 (160)
                      .+.|++||.+....++.++|+||||++++|+++|..|+...... ....+......... ..  ... ......... ..
T Consensus       169 ~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  247 (287)
T cd07838         169 TLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYT-PR  247 (287)
T ss_pred             cccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhccccc-cc
Confidence            45799999999889999999999999999999999988633211 11111111100000 00  000 000000000 00


Q ss_pred             C---CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           97 S---ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        97 ~---~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .   ........+.+++.+||+.+|.+||++.+++.
T Consensus       248 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         248 SFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             chhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence            0   01122355678999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.22  E-value=1.2e-11  Score=97.65  Aligned_cols=45  Identities=11%  Similarity=0.090  Sum_probs=40.3

Q ss_pred             CCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCC
Q 047377           18 DPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEE   62 (160)
Q Consensus        18 ~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~   62 (160)
                      ...+++.|+|||.+....++.++|||||||+++||++|+.||...
T Consensus       203 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~  247 (376)
T cd05598         203 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAD  247 (376)
T ss_pred             ccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCC
Confidence            345678999999999889999999999999999999999999743

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.21  E-value=9.1e-12  Score=95.70  Aligned_cols=109  Identities=17%  Similarity=0.149  Sum_probs=64.8

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCcccccc----------------c
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVK----------------R   84 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----------------~   84 (160)
                      +.+.|++||.+.+..++.++|+||||++++++++|+.|+................. ......                .
T Consensus       160 ~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  238 (308)
T cd06615         160 GTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVS-EGEAKESHRPVSGHPPDSPRPMA  238 (308)
T ss_pred             CCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccc-cccccCCcccccCCCCCccchhh
Confidence            35789999998888899999999999999999999999863221111111100000 000000                0


Q ss_pred             hhhhhcccc--CCCCCCH-HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           85 VKEWMDEIL--LQDSISM-EGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        85 ~~~~~d~~l--~~~~~~~-~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ..+..+...  .....+. .....+.+++.+||..+|++||++.+|+..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         239 IFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             HHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            000000000  0000110 123357899999999999999999998775

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.21  E-value=2e-11  Score=93.86  Aligned_cols=39  Identities=13%  Similarity=-0.072  Sum_probs=35.1

Q ss_pred             CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCC
Q 047377           22 RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAID   60 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~   60 (160)
                      ++.|+|||++.+. .++.++||||+||+++|+++|+.||.
T Consensus       178 t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~  217 (317)
T cd07868         178 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH  217 (317)
T ss_pred             cccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCcc
Confidence            5679999998764 58899999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.21  E-value=1.3e-11  Score=93.32  Aligned_cols=107  Identities=8%  Similarity=-0.060  Sum_probs=61.1

Q ss_pred             CCCcchhhHhhhcC-CcccCccCCCeeehhhhhhCCCCCCCCch--hHHHHHHHHHcCCccccccchhhhhccccCCCC-
Q 047377           22 RPSMVDIVYALSKS-DDLLSDISDDALSSSQLISGEKAIDEEGK--VLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS-   97 (160)
Q Consensus        22 ~~~y~aPE~~~~~~-~s~ksDv~s~Gvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~-   97 (160)
                      .+.|+|||.+.+.. ++.++||||||++++||++|..|+.....  .....+...........-.......+... ... 
T Consensus       162 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  240 (284)
T cd07839         162 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKP-YPMY  240 (284)
T ss_pred             ccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccc-cCCC
Confidence            46899999987654 68999999999999999999888542211  11111111110000000000000000000 000 


Q ss_pred             --------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           98 --------ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        98 --------~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                              ........+.+++.+|++.+|.+||++.+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         241 PATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             CCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence                    01112345678999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.21  E-value=8.4e-12  Score=93.52  Aligned_cols=90  Identities=10%  Similarity=0.031  Sum_probs=62.5

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++..|+|||......++.++||||||++++|+++|+.|+.....  .........               ... ....+.
T Consensus       171 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~~~~~~~~~---------------~~~-~~~~~~  232 (265)
T cd06652         171 GTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA--MAAIFKIAT---------------QPT-NPVLPP  232 (265)
T ss_pred             CCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch--HHHHHHHhc---------------CCC-CCCCch
Confidence            45689999999888899999999999999999999999863211  111111110               111 122333


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+..++.+|+. +|++||++.+|++
T Consensus       233 ~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         233 HVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             hhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence            444556778888884 8999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.21  E-value=1.4e-11  Score=96.42  Aligned_cols=109  Identities=17%  Similarity=0.113  Sum_probs=66.3

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCcc-------------------c
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEG-------------------R   80 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~-------------------~   80 (160)
                      ..+.|+|||.+....++.++||||||++++++++|+.||...+. ..+..+...+.....                   .
T Consensus       179 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (353)
T cd07850         179 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKY  258 (353)
T ss_pred             ccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCC
Confidence            34679999999988999999999999999999999999863321 111111111100000                   0


Q ss_pred             cccchhhhhccccC---CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           81 KVKRVKEWMDEILL---QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        81 ~~~~~~~~~d~~l~---~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ....+.+.+...+.   ....+......+.+++.+|++.||++||++.+++.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~  310 (353)
T cd07850         259 AGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ  310 (353)
T ss_pred             CCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            00000001100000   00111123456789999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.21  E-value=5.3e-12  Score=93.45  Aligned_cols=91  Identities=21%  Similarity=0.201  Sum_probs=65.4

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ...+.|++||......++.++|+||+|++++++++|..|+..........  ....               ..  ....+
T Consensus       164 ~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~--~~~~---------------~~--~~~~~  224 (258)
T cd08215         164 VGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELAL--KILK---------------GQ--YPPIP  224 (258)
T ss_pred             eeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHH--HHhc---------------CC--CCCCC
Confidence            34567999999988889999999999999999999999986332111110  1111               11  11222


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+..++..||..+|.+||++.+++.
T Consensus       225 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         225 SQYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            233456788999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.21  E-value=1.3e-11  Score=94.82  Aligned_cols=39  Identities=13%  Similarity=-0.072  Sum_probs=34.9

Q ss_pred             CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCC
Q 047377           22 RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAID   60 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~   60 (160)
                      ++.|+|||.+.+. .++.++||||||++++|+++|+.||.
T Consensus       178 t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~  217 (317)
T cd07867         178 TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH  217 (317)
T ss_pred             cccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence            4679999998764 57899999999999999999999986

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.21  E-value=1.6e-11  Score=92.15  Aligned_cols=96  Identities=11%  Similarity=0.125  Sum_probs=60.4

Q ss_pred             CCCcchhhHhhh-------cCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhcccc
Q 047377           22 RPSMVDIVYALS-------KSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEIL   93 (160)
Q Consensus        22 ~~~y~aPE~~~~-------~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l   93 (160)
                      .+.|+|||+...       ..++.++||||||++++|+++ |..|+.......  .......       .......++.+
T Consensus       165 ~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~~~~~~-------~~~~~~~~~~~  235 (269)
T cd05042         165 PLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ--VLKQVVR-------EQDIKLPKPQL  235 (269)
T ss_pred             cccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH--HHHHHhh-------ccCccCCCCcc
Confidence            356999998753       356789999999999999998 778876322111  1111111       00011111222


Q ss_pred             CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 047377           94 LQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVS  132 (160)
Q Consensus        94 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~  132 (160)
                           +......+..++..|| .+|++||++.+|++.|.
T Consensus       236 -----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         236 -----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             -----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence                 2222344566778888 59999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.21  E-value=1.5e-11  Score=95.39  Aligned_cols=91  Identities=10%  Similarity=0.007  Sum_probs=60.0

Q ss_pred             CCCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+++.|+|||.+... .++.++||||+||+++||++|..||.........  .....       .      ...+ +.. 
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~--~~i~~-------~------~~~~-~~~-  219 (330)
T cd05586         157 CGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMY--RNIAF-------G------KVRF-PKN-  219 (330)
T ss_pred             cCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHH--HHHHc-------C------CCCC-CCc-
Confidence            356789999998765 4789999999999999999999998643221111  01111       0      0111 111 


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCC----HHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPS----MVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs----~~ev~~  129 (160)
                        .....+..++.+|+..+|.+||+    ..+++.
T Consensus       220 --~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         220 --VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             --cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence              11234578889999999999984    555544

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.20  E-value=1.4e-11  Score=92.77  Aligned_cols=106  Identities=13%  Similarity=0.057  Sum_probs=65.1

Q ss_pred             CCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchhhhhc--------
Q 047377           21 KRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVKEWMD--------   90 (160)
Q Consensus        21 ~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d--------   90 (160)
                      ....|++||.+... .++.++|+||+|++++++++|+.||...... ....+...+....   ........+        
T Consensus       160 ~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  236 (283)
T cd05118         160 VTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPD---PEVWPKFTSLARNYKFS  236 (283)
T ss_pred             CcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCc---hHhcccchhhhhhhhhh
Confidence            34679999998776 7889999999999999999999998633321 1111111111000   000000000        


Q ss_pred             -cc---cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           91 -EI---LLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        91 -~~---l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       +.   .............+..++..||+.+|.+||++.+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         237 FPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             hccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence             00   0000011123456789999999999999999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.19  E-value=2.5e-11  Score=90.84  Aligned_cols=92  Identities=12%  Similarity=0.101  Sum_probs=64.9

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ...|++||......++.++|+||+|++++++++|..|+..... .....+....               .... ....+.
T Consensus       171 ~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---------------~~~~-~~~~~~  234 (268)
T cd06630         171 TIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIA---------------SATT-APSIPE  234 (268)
T ss_pred             ccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh---------------ccCC-CCCCch
Confidence            4589999999888899999999999999999999999862221 0111100100               0011 223333


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+.+++.+|+..+|.+||++.+++.
T Consensus       235 ~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         235 HLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             hhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            44456788999999999999999998874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.19  E-value=4.1e-12  Score=97.85  Aligned_cols=96  Identities=18%  Similarity=0.116  Sum_probs=65.6

Q ss_pred             HhHhh-hhcccCC----CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccc
Q 047377            8 MGIAI-ACLHKDP----SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKV   82 (160)
Q Consensus         8 ~~~~~-~~~~~~~----~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ||+|. .|...++    ++++.|||||++....++..+|-||+||+++||++|.+||...+...+..  ....       
T Consensus       169 FgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~--~I~~-------  239 (357)
T KOG0598|consen  169 FGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYD--KILK-------  239 (357)
T ss_pred             cccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHH--HHhc-------
Confidence            55555 4444344    44599999999999999999999999999999999999997443211111  2221       


Q ss_pred             cchhhhhccccCCCCCCHHHHHHHHHHHHHccccCCCCCC
Q 047377           83 KRVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRP  122 (160)
Q Consensus        83 ~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RP  122 (160)
                              .++  ...|........+++...+.++|.+|-
T Consensus       240 --------~k~--~~~p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  240 --------GKL--PLPPGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             --------CcC--CCCCccCCHHHHHHHHHHhccCHHHhc
Confidence                    111  112222234457788889999999996

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.19  E-value=2.2e-11  Score=90.79  Aligned_cols=91  Identities=12%  Similarity=0.123  Sum_probs=63.8

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +...|++||.+....++.++|+||+|++++++++|..|+..........+.....               . . ....+.
T Consensus       161 ~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---------------~-~-~~~~~~  223 (258)
T cd05578         161 GTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQE---------------T-A-DVLYPA  223 (258)
T ss_pred             CChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhc---------------c-c-cccCcc
Confidence            4467999999988889999999999999999999999987333211111111111               0 0 112233


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCH--HHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSM--VDIV  128 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~--~ev~  128 (160)
                      .....+.+++.+||..+|.+||++  .+++
T Consensus       224 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         224 TWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             cCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence            334667889999999999999999  5443

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.19  E-value=1.1e-11  Score=93.49  Aligned_cols=91  Identities=15%  Similarity=0.158  Sum_probs=61.4

Q ss_pred             CCCCcchhhHhhh----cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCC
Q 047377           21 KRPSMVDIVYALS----KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        21 ~~~~y~aPE~~~~----~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      ..+.|+|||.+..    ..++.++|+||||++++++++|+.|+..... ..........            -..+.+   
T Consensus       165 ~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~------------~~~~~~---  228 (283)
T cd06617         165 GCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT-PFQQLKQVVE------------EPSPQL---  228 (283)
T ss_pred             CCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc-CHHHHHHHHh------------cCCCCC---
Confidence            3467999998754    4468899999999999999999999852111 1111111111            000111   


Q ss_pred             CCCH-HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           97 SISM-EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        97 ~~~~-~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                        +. .....+..++.+||..+|.+||++.+|+.
T Consensus       229 --~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         229 --PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             --CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence              11 12345788999999999999999998876

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.19  E-value=6.5e-12  Score=103.20  Aligned_cols=87  Identities=14%  Similarity=0.072  Sum_probs=68.0

Q ss_pred             CCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           18 DPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        18 ~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      --+++|-|||||.+....|+..+|-|+|||++|||+.|+.||..++..                 +.+..++...   ..
T Consensus       527 TfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe-----------------e~FdsI~~d~---~~  586 (694)
T KOG0694|consen  527 TFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE-----------------EVFDSIVNDE---VR  586 (694)
T ss_pred             cccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH-----------------HHHHHHhcCC---CC
Confidence            345679999999999999999999999999999999999999854421                 1111222122   24


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSM  124 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~  124 (160)
                      ||....++.+.++.+.+.++|.+|..+
T Consensus       587 yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  587 YPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             CCCcccHHHHHHHHHHhccCcccccCC
Confidence            667777888999999999999999865

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.18  E-value=1.7e-11  Score=93.89  Aligned_cols=108  Identities=13%  Similarity=-0.048  Sum_probs=62.1

Q ss_pred             CCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCch--hHHHHHHHHHcCCccccccchhh--hhcc-ccC
Q 047377           21 KRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGK--VLWAKVEGILEGNEGRKVKRVKE--WMDE-ILL   94 (160)
Q Consensus        21 ~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~d~-~l~   94 (160)
                      ..+.|+|||.+.+. .++.++||||+||+++|+++|..||.....  .....+.........+.-.....  ..++ .. 
T Consensus       165 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  243 (303)
T cd07869         165 VTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERF-  243 (303)
T ss_pred             ccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccc-
Confidence            35789999998654 578899999999999999999999973221  11111111111000000000000  0000 00 


Q ss_pred             CCCCCH---------HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 QDSISM---------EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 ~~~~~~---------~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ....+.         .....+.+++..|++.+|++|||+.+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         244 TLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             cccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence            000000         01134678999999999999999998875

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.18  E-value=4.5e-12  Score=95.78  Aligned_cols=107  Identities=12%  Similarity=-0.008  Sum_probs=61.5

Q ss_pred             CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHH-HHHHHcCCcccc---ccchhh---hhcccc
Q 047377           22 RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAK-VEGILEGNEGRK---VKRVKE---WMDEIL   93 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~---~~d~~l   93 (160)
                      .+.|+|||.+... .++.++||||||++++++++|+.||.......... ....+.......   ......   .++...
T Consensus       164 ~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (285)
T cd07861         164 TLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWK  243 (285)
T ss_pred             cccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccC
Confidence            5789999988654 46889999999999999999999986432211110 000000000000   000000   000000


Q ss_pred             CCC---CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           94 LQD---SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        94 ~~~---~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       ..   .........+.+++.+|+..+|.+||++.+|+.
T Consensus       244 -~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         244 -KGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             -cchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence             00   000112345578999999999999999998875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.18  E-value=1.2e-11  Score=93.74  Aligned_cols=93  Identities=10%  Similarity=-0.000  Sum_probs=62.6

Q ss_pred             CCCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+.+.|+|||.... ..++.++||||||++++|+++|..||..........+....                ... ....
T Consensus       156 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~----------------~~~-~~~~  218 (279)
T cd05633         156 VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT----------------LTV-NVEL  218 (279)
T ss_pred             CCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh----------------hcC-CcCC
Confidence            35679999999864 45789999999999999999999998632211111100100                001 1122


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRP-----SMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~  129 (160)
                      +......+..++..|+..+|.+||     +++++++
T Consensus       219 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~  254 (279)
T cd05633         219 PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE  254 (279)
T ss_pred             ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence            223345667888999999999999     5877765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.18  E-value=1.2e-11  Score=100.81  Aligned_cols=97  Identities=14%  Similarity=0.105  Sum_probs=68.1

Q ss_pred             hcccCCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhcccc
Q 047377           14 CLHKDPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEIL   93 (160)
Q Consensus        14 ~~~~~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l   93 (160)
                      +.++..=++|.|||||..- ..|++.+||||||++++||+|+..||.+-.  ..+.+...+..|-  ++..+.++-||  
T Consensus       199 s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~--n~AQIYKKV~SGi--KP~sl~kV~dP--  271 (632)
T KOG0584|consen  199 SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT--NPAQIYKKVTSGI--KPAALSKVKDP--  271 (632)
T ss_pred             cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC--CHHHHHHHHHcCC--CHHHhhccCCH--
Confidence            4556667789999999775 889999999999999999999999997322  1112222222100  12223333333  


Q ss_pred             CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           94 LQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        94 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                                 ++.+++.+|+.. ..+||++.|++.
T Consensus       272 -----------evr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  272 -----------EVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             -----------HHHHHHHHHhcC-chhccCHHHHhh
Confidence                       347888999999 899999998875

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.18  E-value=1.3e-11  Score=92.54  Aligned_cols=91  Identities=15%  Similarity=0.158  Sum_probs=62.4

Q ss_pred             CCcchhhHhhh---cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           23 PSMVDIVYALS---KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        23 ~~y~aPE~~~~---~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      |.|||||.+--   .+|+.++|||||||.++|+.||+.||......+. -+...+.      .+      .|.| +..  
T Consensus       255 ~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe-~ltkvln------~e------PP~L-~~~--  318 (391)
T KOG0983|consen  255 AAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFE-VLTKVLN------EE------PPLL-PGH--  318 (391)
T ss_pred             ccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHH-HHHHHHh------cC------CCCC-Ccc--
Confidence            78999998753   4788999999999999999999999975332221 1112221      00      0333 111  


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ..-...+..+...|+.+|+.+||...++++
T Consensus       319 ~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  319 MGFSPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             cCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence            112345677888999999999999887765

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.18  E-value=1.2e-11  Score=93.42  Aligned_cols=106  Identities=11%  Similarity=0.043  Sum_probs=62.0

Q ss_pred             CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhHH-HHHHHHHcCCccc----------cccchhhhh
Q 047377           22 RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVLW-AKVEGILEGNEGR----------KVKRVKEWM   89 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~~   89 (160)
                      .+.|+|||++..+ .++.++|+||||++++++++|..||........ ..+..........          ....+....
T Consensus       162 ~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (283)
T cd07835         162 TLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWA  241 (283)
T ss_pred             ccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhccccc
Confidence            5679999987664 468899999999999999999999864332110 0000100000000          000000000


Q ss_pred             ccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           90 DEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        90 d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ...+  ..........+.+++.+|++.+|.+||++.+++.
T Consensus       242 ~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         242 RQDL--SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             ccch--hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            0000  0001112245678999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.18  E-value=1.3e-11  Score=98.20  Aligned_cols=110  Identities=10%  Similarity=-0.026  Sum_probs=65.2

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc--------hhHHHHHHHHHcCCccc----cccchhh
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG--------KVLWAKVEGILEGNEGR----KVKRVKE   87 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~--------~~~~~~~~~~~~~~~~~----~~~~~~~   87 (160)
                      .+++.|+|||++....++.++||||+|++++|+++|..|+....        ......+.........+    ....+..
T Consensus       244 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~  323 (391)
T PHA03212        244 AGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDE  323 (391)
T ss_pred             cCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHH
Confidence            35689999999998899999999999999999999998764211        01111111111000000    0000000


Q ss_pred             hh----c-cccCCCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           88 WM----D-EILLQDSIS-----MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        88 ~~----d-~~l~~~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ..    . ........+     ......+..++.+|++.||.+||++.|+++
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        324 IYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             HHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence            00    0 000000000     123456788999999999999999999985

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.17  E-value=1.3e-11  Score=95.89  Aligned_cols=111  Identities=12%  Similarity=0.058  Sum_probs=66.6

Q ss_pred             CCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhhcc-------
Q 047377           21 KRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWMDE-------   91 (160)
Q Consensus        21 ~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~-------   91 (160)
                      +.+.|+|||.+.. ..++.++||||+|++++++++|+.||..... .....+...+....   ......+.+.       
T Consensus       171 ~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  247 (336)
T cd07849         171 ATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPS---QEDLNCIISLRARNYIK  247 (336)
T ss_pred             cCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCC---HHHHHHhhchhhhhHHh
Confidence            3567999998765 4688999999999999999999999963321 11111112121000   0000000000       


Q ss_pred             ccC-CCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHcc
Q 047377           92 ILL-QDSIS-----MEGVMRAMGIAIACLHKDPSKRPSMVDIVHA--VSKS  134 (160)
Q Consensus        92 ~l~-~~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~--L~~l  134 (160)
                      .++ ....+     ......+.+++.+||+.+|.+||++.+++..  ++..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         248 SLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY  298 (336)
T ss_pred             hcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence            000 00000     0123457899999999999999999999885  5444

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.17  E-value=1.4e-11  Score=106.86  Aligned_cols=96  Identities=17%  Similarity=0.085  Sum_probs=65.7

Q ss_pred             CCCCCcchhhHhhh--cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           20 SKRPSMVDIVYALS--KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        20 ~~~~~y~aPE~~~~--~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      .+++.|+|||.+..  ..++.++|||||||+++||++|..||..... . ..+...+.      ..       +.++...
T Consensus       202 vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~-~-~qli~~lk------~~-------p~lpi~~  266 (1021)
T PTZ00266        202 VGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN-F-SQLISELK------RG-------PDLPIKG  266 (1021)
T ss_pred             CCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc-H-HHHHHHHh------cC-------CCCCcCC
Confidence            45689999999864  3588999999999999999999999963221 1 11111111      00       1110111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH--HHHcc
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH--AVSKS  134 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~--~L~~l  134 (160)
                      +    ...+..++..||..+|.+||++.+++.  .+..+
T Consensus       267 ~----S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        267 K----SKELNILIKNLLNLSAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             C----CHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence            2    345688999999999999999999983  45444

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.16  E-value=1.7e-11  Score=96.79  Aligned_cols=93  Identities=15%  Similarity=0.099  Sum_probs=63.0

Q ss_pred             CCCCCcchhhHhhhc----CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           20 SKRPSMVDIVYALSK----SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~----~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      .+++.|+|||.+...    .++.++|||||||+++|+++|+.||.......  .......      ..       ..+  
T Consensus       204 ~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~--~~~~i~~------~~-------~~~--  266 (370)
T cd05596         204 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG--TYSKIMD------HK-------NSL--  266 (370)
T ss_pred             CCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH--HHHHHHc------CC-------CcC--
Confidence            356889999998653    47899999999999999999999997433211  1111211      00       011  


Q ss_pred             CCCCH--HHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 047377           96 DSISM--EGVMRAMGIAIACLHKDPSK--RPSMVDIVHA  130 (160)
Q Consensus        96 ~~~~~--~~~~~~~~l~~~C~~~~p~~--RPs~~ev~~~  130 (160)
                       .++.  .....+.+++..|+..+|.+  |+++.+++..
T Consensus       267 -~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         267 -TFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             -CCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence             1111  12345678889999988987  9999998653

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.16  E-value=2.2e-11  Score=90.53  Aligned_cols=98  Identities=20%  Similarity=0.181  Sum_probs=65.7

Q ss_pred             CCCCCCCcchhhHhh-hcCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           18 DPSKRPSMVDIVYAL-SKSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        18 ~~~~~~~y~aPE~~~-~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      .....+.|+|||... ....+.++||||+|++++++++|..|+..... ...........           .......  
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~-----------~~~~~~~--  223 (260)
T PF00069_consen  157 PFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILK-----------RPLPSSS--  223 (260)
T ss_dssp             SSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHH-----------THHHHHT--
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccc-----------ccccccc--
Confidence            344557899999998 78899999999999999999999999874311 11111111110           0000000  


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       .........+..++..|++.+|.+||++.++++
T Consensus       224 -~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  224 -QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             -TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             -cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             000011257789999999999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.16  E-value=2.6e-11  Score=92.61  Aligned_cols=107  Identities=8%  Similarity=-0.022  Sum_probs=62.0

Q ss_pred             CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCcccc---ccchhhhhccccCCC
Q 047377           22 RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRK---VKRVKEWMDEILLQD   96 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~d~~l~~~   96 (160)
                      .+.|+|||.+... .++.++||||||++++|+++|+.||...... ....+...........   ...+....+... ..
T Consensus       189 ~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  267 (311)
T cd07866         189 TRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHS-FT  267 (311)
T ss_pred             ccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhccccccccc-CC
Confidence            3569999988654 5789999999999999999999998633221 1111111111000000   000000000000 00


Q ss_pred             CCCH-------HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           97 SISM-------EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        97 ~~~~-------~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ..+.       .....+.+++.+|++.+|.+||++.+++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         268 NYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             CCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            0110       11245788999999999999999988864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.16  E-value=1.3e-11  Score=91.89  Aligned_cols=92  Identities=13%  Similarity=0.042  Sum_probs=64.6

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ..+.|++||.......+.++|+||||++++++++|..||.........   ..+.              ....   ..+.
T Consensus       163 ~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~---~~~~--------------~~~~---~~~~  222 (265)
T cd05579         163 GTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIF---QNIL--------------NGKI---EWPE  222 (265)
T ss_pred             cCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHh--------------cCCc---CCCc
Confidence            346799999998888999999999999999999999998633211100   1111              0011   1111


Q ss_pred             H--HHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 047377          101 E--GVMRAMGIAIACLHKDPSKRPSMVDIVHAVS  132 (160)
Q Consensus       101 ~--~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~  132 (160)
                      .  ....+..++.+|++.+|.+||++..+.+.|+
T Consensus       223 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         223 DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            1  1456688999999999999999966666554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.16  E-value=3.8e-11  Score=90.65  Aligned_cols=108  Identities=12%  Similarity=0.037  Sum_probs=62.7

Q ss_pred             CCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchhH-HHHHHHHHcCCcc------ccccchhhhhccc
Q 047377           21 KRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKVL-WAKVEGILEGNEG------RKVKRVKEWMDEI   92 (160)
Q Consensus        21 ~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~d~~   92 (160)
                      ....|++||.+.+ ..++.++|+||||++++|+++|..||....... ...+.........      +..........+.
T Consensus       162 ~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (286)
T cd07847         162 ATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPE  241 (286)
T ss_pred             cccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCC
Confidence            3467999999876 457899999999999999999999986332111 1111111100000      0000000000000


Q ss_pred             cCCCCCCH-----HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           93 LLQDSISM-----EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        93 l~~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      . ....+.     .....+.+++.+||+.+|++||++.+++.
T Consensus       242 ~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         242 P-ETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             c-ccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            0 000010     11345788999999999999999998875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.16  E-value=1.8e-11  Score=99.91  Aligned_cols=87  Identities=11%  Similarity=-0.002  Sum_probs=63.9

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +..|.|||......++..+|+||+|+++++|++|+.|+......  ..+...+.                   .+.+...
T Consensus       476 t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei~~~i~-------------------~~~~s~~  534 (612)
T KOG0603|consen  476 TLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEIHTRIQ-------------------MPKFSEC  534 (612)
T ss_pred             hhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHHHHhhc-------------------CCccccc
Confidence            45799999999889999999999999999999999999722111  11111111                   1222233


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+|+..|++.+|.+||++.++..
T Consensus       535 vS~~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  535 VSDEAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             cCHHHHHHHHHhccCChhhCcChhhhcc
Confidence            3445578889999999999999998865

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.16  E-value=1.2e-11  Score=93.18  Aligned_cols=94  Identities=11%  Similarity=0.013  Sum_probs=63.7

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+.+.|+|||++....++.++|+||||++++|+++|..|+..........  ..+.           ......   ...+
T Consensus       167 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~--~~~~-----------~~~~~~---~~~~  230 (267)
T PHA03390        167 DGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDL--ESLL-----------KRQQKK---LPFI  230 (267)
T ss_pred             CCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhH--HHHH-----------Hhhccc---CCcc
Confidence            34578999999988889999999999999999999999986322111100  0000           000011   1122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCC-HHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPS-MVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs-~~ev~~  129 (160)
                      ......+.+++..|++.+|.+||+ +.++++
T Consensus       231 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        231 KNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             cccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence            233445688889999999999995 687763

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.16  E-value=2.9e-11  Score=91.98  Aligned_cols=108  Identities=6%  Similarity=-0.074  Sum_probs=63.5

Q ss_pred             CCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccc------cccchhhhhccc
Q 047377           21 KRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGR------KVKRVKEWMDEI   92 (160)
Q Consensus        21 ~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~d~~   92 (160)
                      ..+.|+|||.+.+ ..++.++||||+|++++|+++|+.||...... ....+.........+      ..........+.
T Consensus       165 ~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (288)
T cd07871         165 VTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQ  244 (288)
T ss_pred             ecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCc
Confidence            3578999999875 45889999999999999999999999643211 111111111100000      000000011111


Q ss_pred             cCCCCC----CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           93 LLQDSI----SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        93 l~~~~~----~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      . ....    .........+++.+|+..||.+||++.|+++
T Consensus       245 ~-~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         245 Y-RAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             c-CCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            0 0000    0011235678999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.16  E-value=2.7e-11  Score=96.32  Aligned_cols=109  Identities=11%  Similarity=-0.015  Sum_probs=65.3

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc----hhHHHHHHHHHcCCccc----cccchhhh---h
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG----KVLWAKVEGILEGNEGR----KVKRVKEW---M   89 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~----~~~~~~~~~~~~~~~~~----~~~~~~~~---~   89 (160)
                      +++.|+|||++....++.++|||||||+++|+++|+.||....    ......+...+.....+    ....+...   .
T Consensus       249 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (392)
T PHA03207        249 GTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQY  328 (392)
T ss_pred             cccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhh
Confidence            4678999999998899999999999999999999999986321    11111111111100000    00000000   0


Q ss_pred             ccccCCCCCCH-------HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           90 DEILLQDSISM-------EGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        90 d~~l~~~~~~~-------~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .... ...+..       .....+..++.+|+..+|.+||++.+++..
T Consensus       329 ~~~~-~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        329 AIVL-RPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             cccc-cCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence            0000 011110       112346678899999999999999998764

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.16  E-value=1.1e-11  Score=96.41  Aligned_cols=115  Identities=11%  Similarity=0.087  Sum_probs=67.5

Q ss_pred             CCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccc-----cccchhhhhcc--c
Q 047377           22 RPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGR-----KVKRVKEWMDE--I   92 (160)
Q Consensus        22 ~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~d~--~   92 (160)
                      ...|+|||.+.. ..++.++||||||++++++++|+.||...... ..............+     ......+.+..  .
T Consensus       171 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (337)
T cd07858         171 TRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPY  250 (337)
T ss_pred             ccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCc
Confidence            457999998865 46889999999999999999999998633211 111111111000000     00000111100  0


Q ss_pred             cCCC---CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHcccc
Q 047377           93 LLQD---SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA--VSKSDD  136 (160)
Q Consensus        93 l~~~---~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~--L~~l~~  136 (160)
                      ....   .........+.+++.+|++.+|.+||++.+++..  ++.+..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~  299 (337)
T cd07858         251 TPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD  299 (337)
T ss_pred             ccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence            0000   0011233557899999999999999999999876  665543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.16  E-value=2.3e-11  Score=93.68  Aligned_cols=90  Identities=18%  Similarity=0.151  Sum_probs=60.7

Q ss_pred             CCCcchhhHhh---hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           22 RPSMVDIVYAL---SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        22 ~~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+.|+|||++.   .+.++.++||||||++++++++|..|+..........  ....       ..     .+..    .
T Consensus       180 ~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~--~~~~-------~~-----~~~~----~  241 (313)
T cd06633         180 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY--HIAQ-------ND-----SPTL----Q  241 (313)
T ss_pred             cccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH--HHHh-------cC-----CCCC----C
Confidence            35799999974   4568899999999999999999999986322111111  1111       00     0111    0


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .......+..++.+||+.+|.+||++.+++.
T Consensus       242 ~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~  272 (313)
T cd06633         242 SNEWTDSFRGFVDYCLQKIPQERPASAELLR  272 (313)
T ss_pred             ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1111234678999999999999999999885

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.15  E-value=2.4e-11  Score=92.81  Aligned_cols=92  Identities=13%  Similarity=0.092  Sum_probs=63.3

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ..++|++||+.....++.++|+||||++++++++|..|+.........   ..+.           ....+.+   ....
T Consensus       178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~---~~~~-----------~~~~~~~---~~~~  240 (292)
T cd06657         178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM---KMIR-----------DNLPPKL---KNLH  240 (292)
T ss_pred             cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHH-----------hhCCccc---CCcc
Confidence            346799999998888899999999999999999999998632211110   1110           0011111   0111


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+..++.+||..+|.+||++.+++.
T Consensus       241 ~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         241 KVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             cCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence            12235678889999999999999999877

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.15  E-value=1.3e-11  Score=93.23  Aligned_cols=103  Identities=16%  Similarity=0.175  Sum_probs=62.0

Q ss_pred             CCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchhhhh------cccc
Q 047377           22 RPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVKEWM------DEIL   93 (160)
Q Consensus        22 ~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------d~~l   93 (160)
                      .+.|+|||+... ..++.++||||||++++|+++|..|+...... ....+......    .........      +...
T Consensus       163 ~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  238 (286)
T cd07846         163 TRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGN----LIPRHQEIFQKNPLFAGMR  238 (286)
T ss_pred             eeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCC----CchhhHHHhccchHhhccc
Confidence            467999999865 34778999999999999999999988633211 11111111100    000000000      0000


Q ss_pred             CCCCC---------CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           94 LQDSI---------SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        94 ~~~~~---------~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       ....         .......+.+++.+||+.+|.+||++.++++
T Consensus       239 -~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         239 -LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             -cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence             0000         0122355788999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.15  E-value=3.7e-11  Score=93.57  Aligned_cols=107  Identities=11%  Similarity=0.064  Sum_probs=63.6

Q ss_pred             CCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCcccc-----ccchhhhhcccc
Q 047377           21 KRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRK-----VKRVKEWMDEIL   93 (160)
Q Consensus        21 ~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~d~~l   93 (160)
                      .++.|+|||.+.. ..++.++||||+|++++++++|..||..... .....+.........+.     .......+. .+
T Consensus       177 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  255 (343)
T cd07878         177 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQ-SL  255 (343)
T ss_pred             ccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhh-cc
Confidence            4578999999876 4688999999999999999999999864321 11111111110000000     000000000 00


Q ss_pred             CCCCCCH--------HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           94 LQDSISM--------EGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        94 ~~~~~~~--------~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                        ...+.        .....+.+++.+|+..||.+||++.+++..
T Consensus       256 --~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         256 --PHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             --ccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence              00010        011235789999999999999999999863

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.15  E-value=2.4e-11  Score=92.25  Aligned_cols=104  Identities=10%  Similarity=-0.025  Sum_probs=62.1

Q ss_pred             CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhH-HHHHHHHHcCCccccccchhhh------hc-cc
Q 047377           22 RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVL-WAKVEGILEGNEGRKVKRVKEW------MD-EI   92 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~d-~~   92 (160)
                      .+.|+|||++... .++.++||||||++++++++|..||....... ...+...+....   .......      .. +.
T Consensus       174 ~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  250 (295)
T cd07837         174 TLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPT---EQVWPGVSKLRDWHEFPQ  250 (295)
T ss_pred             ccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCC---hhhCcchhhccchhhcCc
Confidence            4679999988653 57899999999999999999999986332111 111111111000   0000000      00 00


Q ss_pred             cCCCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           93 LLQDS----ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        93 l~~~~----~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      . ...    ........+.+++.+|+..+|.+||++.+++.
T Consensus       251 ~-~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         251 W-KPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             c-cchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            0 000    00112345788999999999999999998875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.15  E-value=1.9e-11  Score=89.34  Aligned_cols=93  Identities=14%  Similarity=0.055  Sum_probs=64.5

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCC-CchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDE-EGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ...+.|++||......++.++|||+||++++++++|..|+.. ......   .....              .........
T Consensus       147 ~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~---~~~~~--------------~~~~~~~~~  209 (244)
T smart00220      147 VGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLEL---FKKIG--------------KPKPPFPPP  209 (244)
T ss_pred             cCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH---HHHHh--------------ccCCCCccc
Confidence            345689999999888899999999999999999999999863 211111   11111              011000000


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .......+..++.+|+..+|++||++.++++
T Consensus       210 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      210 EWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             cccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            0003356788999999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.15  E-value=3e-11  Score=91.61  Aligned_cols=97  Identities=13%  Similarity=0.083  Sum_probs=66.0

Q ss_pred             CCCCcchhhHhhhcC--CcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           21 KRPSMVDIVYALSKS--DDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~--~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..+.|++||......  .+.++||||||++++|+++|..|+..... ..........              ....   ..
T Consensus       168 ~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~--------------~~~~---~~  230 (288)
T cd05583         168 GTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRI--------------LKSK---PP  230 (288)
T ss_pred             CCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHH--------------HccC---CC
Confidence            457899999987665  78899999999999999999999852211 1111111111              1000   11


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      .+......+.+++.+||+.+|++||++.++.+.|+..
T Consensus       231 ~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~  267 (288)
T cd05583         231 FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP  267 (288)
T ss_pred             CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence            2222234567889999999999999999888877665

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.15  E-value=3.3e-11  Score=94.56  Aligned_cols=93  Identities=13%  Similarity=0.040  Sum_probs=60.9

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+....++.++|||||||+++|+++|..||.......  .......      ..       ..+ .....
T Consensus       200 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~--~~~~i~~------~~-------~~~-~~~~~  263 (364)
T cd05599         200 VGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQE--TYRKIIN------WK-------ETL-QFPDE  263 (364)
T ss_pred             ccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHH--HHHHHHc------CC-------Ccc-CCCCC
Confidence            36789999999998899999999999999999999999997433211  1111111      00       011 00000


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCC---HHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPS---MVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs---~~ev~~  129 (160)
                      ......+.+++.+|+. +|.+|++   +.+++.
T Consensus       264 ~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~  295 (364)
T cd05599         264 VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS  295 (364)
T ss_pred             CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence            0112345667777885 8999998   777765

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.15  E-value=1.5e-11  Score=96.87  Aligned_cols=109  Identities=12%  Similarity=0.053  Sum_probs=64.1

Q ss_pred             CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCcccc----ccchhhhhccccCC
Q 047377           22 RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRK----VKRVKEWMDEILLQ   95 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~d~~l~~   95 (160)
                      ++.|+|||.+.+. .++.++||||+||+++||++|+.||...... ....+.........+.    .......+......
T Consensus       167 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  246 (372)
T cd07853         167 TQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHK  246 (372)
T ss_pred             CCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCC
Confidence            5679999998764 4789999999999999999999999743311 1111111111000000    00000000000000


Q ss_pred             C-------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           96 D-------SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        96 ~-------~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .       .........+.+++.+|++.||.+||++.+++..
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         247 PPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             CCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence            0       0011123456789999999999999999999863

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.15  E-value=4.1e-11  Score=98.55  Aligned_cols=93  Identities=16%  Similarity=0.152  Sum_probs=69.6

Q ss_pred             CCCCCCCcchhhHhhhcCCc-ccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCC
Q 047377           18 DPSKRPSMVDIVYALSKSDD-LLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        18 ~~~~~~~y~aPE~~~~~~~s-~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      ..++-|.|.+||.+.+..|. .++||||.||+++.+++|+-||+.++.  -..+....+|                  ..
T Consensus       170 TSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi--r~LLlKV~~G------------------~f  229 (786)
T KOG0588|consen  170 TSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI--RVLLLKVQRG------------------VF  229 (786)
T ss_pred             ccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH--HHHHHHHHcC------------------cc
Confidence            35677999999999999886 689999999999999999999984331  1111122211                  11


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      +.|.....+..+|+.+++..||.+|-++.||+++
T Consensus       230 ~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  230 EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             cCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence            3344445566899999999999999999999874

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.14  E-value=2.6e-11  Score=95.25  Aligned_cols=39  Identities=8%  Similarity=-0.046  Sum_probs=34.3

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAI   59 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~   59 (160)
                      +++.|+|||++....++.++|||||||+++|++++..++
T Consensus       218 gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             ccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            457899999999889999999999999999999865543

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.14  E-value=3.6e-11  Score=91.02  Aligned_cols=93  Identities=9%  Similarity=-0.013  Sum_probs=63.5

Q ss_pred             CCCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+.+.|+|||.+..+ .++.++||||+|++++|+++|+.||...............            ....+     ..
T Consensus       156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~------------~~~~~-----~~  218 (278)
T cd05606         156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT------------LTMAV-----EL  218 (278)
T ss_pred             CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHh------------hccCC-----CC
Confidence            356789999998755 5889999999999999999999999632111111100111            00111     22


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRP-----SMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~  129 (160)
                      +......+.+++.+|+..+|.+||     ++.++++
T Consensus       219 ~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         219 PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            222345678889999999999999     8888864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.14  E-value=2.3e-11  Score=91.92  Aligned_cols=106  Identities=11%  Similarity=0.034  Sum_probs=60.8

Q ss_pred             CCCcchhhHhhhcC-CcccCccCCCeeehhhhhhCCCCCCCCchhHH-HHHHHHHcCCccc------c----ccchhhhh
Q 047377           22 RPSMVDIVYALSKS-DDLLSDISDDALSSSQLISGEKAIDEEGKVLW-AKVEGILEGNEGR------K----VKRVKEWM   89 (160)
Q Consensus        22 ~~~y~aPE~~~~~~-~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~------~----~~~~~~~~   89 (160)
                      .+.|+|||...+.. ++.++||||||++++|+++|+.||........ .............      .    ...+..+.
T Consensus       163 ~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (284)
T cd07860         163 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWA  242 (284)
T ss_pred             cccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhccccc
Confidence            46799999876544 58899999999999999999999864332111 1101111000000      0    00000000


Q ss_pred             ccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           90 DEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        90 d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ...+  ..........+.+++.+|++.+|.+||++.+++.
T Consensus       243 ~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         243 RQDF--SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             ccCH--HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence            0000  0000011234578899999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.13  E-value=2.4e-11  Score=104.76  Aligned_cols=100  Identities=14%  Similarity=0.024  Sum_probs=68.4

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||++.+..++.++|||||||+++|+++|+.||.......... ..              ...++.- . ...
T Consensus       192 vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~-~~--------------~i~~P~~-~-~p~  254 (932)
T PRK13184        192 VGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISY-RD--------------VILSPIE-V-APY  254 (932)
T ss_pred             CCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhh-hh--------------hccChhh-c-ccc
Confidence            35789999999998999999999999999999999999996322110000 00              0000100 0 000


Q ss_pred             HHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHcccc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRP-SMVDIVHAVSKSDD  136 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RP-s~~ev~~~L~~l~~  136 (160)
                      ...+..+..++.+|++.+|++|+ ++.++.+.|+...+
T Consensus       255 ~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq  292 (932)
T PRK13184        255 REIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ  292 (932)
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            12234567889999999999996 57778888877654

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.13  E-value=3.3e-11  Score=89.16  Aligned_cols=90  Identities=16%  Similarity=0.203  Sum_probs=63.7

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ..+.|++||......++.++|+|++|++++++++|..|+......  ........               ..  ....+.
T Consensus       161 ~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~--~~~~~~~~---------------~~--~~~~~~  221 (254)
T cd06627         161 GTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM--AALFRIVQ---------------DD--HPPLPE  221 (254)
T ss_pred             cchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH--HHHHHHhc---------------cC--CCCCCC
Confidence            346799999998888899999999999999999999998632211  11111111               00  111222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+..++.+|+..+|++||++.+++.
T Consensus       222 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         222 GISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             CCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            22356678999999999999999998874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.13  E-value=8e-11  Score=89.85  Aligned_cols=105  Identities=11%  Similarity=-0.007  Sum_probs=60.7

Q ss_pred             CCCcchhhHhhhcC-CcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchh-----hhhcc-ccC
Q 047377           22 RPSMVDIVYALSKS-DDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVK-----EWMDE-ILL   94 (160)
Q Consensus        22 ~~~y~aPE~~~~~~-~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~d~-~l~   94 (160)
                      .+.|+|||.+.... ++.++||||||++++|+++|..|+..............+.+.-  +.....     ...+. .+ 
T Consensus       186 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-  262 (310)
T cd07865         186 TLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI--TPEVWPGVDKLELFKKMEL-  262 (310)
T ss_pred             CccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC--ChhhcccccchhhhhhccC-
Confidence            35699999886543 6889999999999999999999986433211111001110000  000000     00000 00 


Q ss_pred             CCCC---------CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 QDSI---------SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 ~~~~---------~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ....         +......+.+++.+||..+|.+||++.++++
T Consensus       263 ~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         263 PQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             CCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence            0000         0001234568999999999999999998875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.13  E-value=5.4e-11  Score=94.10  Aligned_cols=42  Identities=12%  Similarity=0.090  Sum_probs=38.8

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDE   61 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~   61 (160)
                      .+++.|+|||.+....++.++||||+||+++||++|+.||..
T Consensus       209 ~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~  250 (382)
T cd05625         209 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLA  250 (382)
T ss_pred             ccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCC
Confidence            456889999999988999999999999999999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.13  E-value=3.6e-11  Score=104.70  Aligned_cols=94  Identities=14%  Similarity=0.116  Sum_probs=66.5

Q ss_pred             CCCCCCCcchhhHhhhcC---CcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccC
Q 047377           18 DPSKRPSMVDIVYALSKS---DDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        18 ~~~~~~~y~aPE~~~~~~---~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      +..++|-|||||.+.+..   -..+.||||+|||++||+||+.|+..-+ +.|+-+...-                .+- 
T Consensus      1397 ~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~d-ne~aIMy~V~----------------~gh- 1458 (1509)
T KOG4645|consen 1397 SMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELD-NEWAIMYHVA----------------AGH- 1458 (1509)
T ss_pred             hhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhcc-chhHHHhHHh----------------ccC-
Confidence            455789999999986543   3467999999999999999999996211 1222211111                111 


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .+++|......-.+.+.+|++.||+.|-+..|+++
T Consensus      1459 ~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1459 KPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred             CCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence            34556666666788999999999999987766654

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.12  E-value=3.2e-11  Score=97.90  Aligned_cols=90  Identities=17%  Similarity=0.145  Sum_probs=68.9

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      -++|-|||||...++.|+..+|.||+||++||+.+|++||....  +...+..+..               .   +..+|
T Consensus       161 kGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s--i~~Lv~~I~~---------------d---~v~~p  220 (808)
T KOG0597|consen  161 KGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS--ITQLVKSILK---------------D---PVKPP  220 (808)
T ss_pred             cCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH--HHHHHHHHhc---------------C---CCCCc
Confidence            34589999999999999999999999999999999999996322  1111112221               1   22345


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+..+...-+.+||.+|-+..+++.
T Consensus       221 ~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  221 STASSSFVNFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             ccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence            566677888889999999999999998865

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.12  E-value=4e-11  Score=91.14  Aligned_cols=108  Identities=14%  Similarity=0.070  Sum_probs=62.9

Q ss_pred             CCCCcchhhHhhhcC-CcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccc-----------cccchhh
Q 047377           21 KRPSMVDIVYALSKS-DDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGR-----------KVKRVKE   87 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~-~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~~   87 (160)
                      ..+.|+|||.+.... ++.++|+||+|++++|+++|..||...... ....+...+.....+           .......
T Consensus       168 ~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (293)
T cd07843         168 VTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTK  247 (293)
T ss_pred             ccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhccccccc
Confidence            346799999987544 688999999999999999999998632211 111111111000000           0000000


Q ss_pred             hhccccCCCCCCHH-HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           88 WMDEILLQDSISME-GVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        88 ~~d~~l~~~~~~~~-~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+ ...++.. ....+.+++..|++.+|++||++.|++.
T Consensus       248 ~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         248 YPYNQL-RKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             ccchhh-hccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence            000011 1111111 2445678999999999999999999875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.11  E-value=4.2e-11  Score=91.51  Aligned_cols=105  Identities=9%  Similarity=-0.097  Sum_probs=63.0

Q ss_pred             CCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhhc--------
Q 047377           21 KRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWMD--------   90 (160)
Q Consensus        21 ~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d--------   90 (160)
                      .++.|+|||.+... .++.++||||+|++++||++|+.||..... .....+...+....   ......++.        
T Consensus       166 ~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  242 (301)
T cd07873         166 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPT---EETWPGILSNEEFKSYN  242 (301)
T ss_pred             eeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCC---hhhchhhhccccccccc
Confidence            35789999988654 478899999999999999999999974321 11111111110000   000000000        


Q ss_pred             -cccCCCCC----CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           91 -EILLQDSI----SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        91 -~~l~~~~~----~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       +.. ..++    .......+.+++.+|++.+|.+||++.+++.
T Consensus       243 ~~~~-~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         243 YPKY-RADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             cCcc-ccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence             000 0000    0012234678999999999999999999876

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.11  E-value=4.6e-11  Score=91.52  Aligned_cols=39  Identities=13%  Similarity=-0.102  Sum_probs=34.5

Q ss_pred             CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCC
Q 047377           22 RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAID   60 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~   60 (160)
                      ++.|+|||.+.+. .++.++||||||++++++++|+.|+.
T Consensus       178 ~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~  217 (316)
T cd07842         178 TIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFK  217 (316)
T ss_pred             cccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCc
Confidence            4679999988664 57899999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.11  E-value=9.1e-11  Score=92.65  Aligned_cols=42  Identities=10%  Similarity=-0.072  Sum_probs=38.7

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDE   61 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~   61 (160)
                      .+++.|+|||.+....++.++|||||||+++|+++|..||..
T Consensus       209 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~  250 (377)
T cd05629         209 VGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCS  250 (377)
T ss_pred             CCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCC
Confidence            367889999999888999999999999999999999999964

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.11  E-value=1.1e-10  Score=88.09  Aligned_cols=108  Identities=13%  Similarity=0.043  Sum_probs=61.8

Q ss_pred             CCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchhHH-HHHHHHHcCCccc---cccchhhhhccccC--
Q 047377           22 RPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLW-AKVEGILEGNEGR---KVKRVKEWMDEILL--   94 (160)
Q Consensus        22 ~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~d~~l~--   94 (160)
                      ...|+|||.+.. ..++.++|+||||++++|+++|..|+........ ......+.....+   ........++..+.  
T Consensus       161 ~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (283)
T cd07830         161 TRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQF  240 (283)
T ss_pred             cccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccccc
Confidence            457999998754 4578999999999999999999999863321111 1111111000000   00000000000000  


Q ss_pred             -CC---CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 -QD---SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 -~~---~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       ..   .........+..++.+||+.+|.+||++.|++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         241 APTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             ccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence             00   000011356789999999999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.11  E-value=9.7e-11  Score=86.75  Aligned_cols=92  Identities=14%  Similarity=-0.004  Sum_probs=64.2

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      -++|+||+||+++...|+..+|||+.||+++-++.|..||..+...-.-.  .+..|           -  -.. .+++.
T Consensus       173 ~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye--~I~~g-----------~--yd~-~~~~w  236 (355)
T KOG0033|consen  173 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYE--QIKAG-----------A--YDY-PSPEW  236 (355)
T ss_pred             cCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHH--HHhcc-----------c--cCC-CCccc
Confidence            35699999999999999999999999999999999999997533221111  12211           0  111 12222


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDI  127 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev  127 (160)
                      .........|+.+++..||++|-+..|.
T Consensus       237 ~~is~~Ak~LvrrML~~dP~kRIta~EA  264 (355)
T KOG0033|consen  237 DTVTPEAKSLIRRMLTVNPKKRITADEA  264 (355)
T ss_pred             CcCCHHHHHHHHHHhccChhhhccHHHH
Confidence            2333455678889999999999886654

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.10  E-value=2.7e-11  Score=90.98  Aligned_cols=88  Identities=15%  Similarity=0.056  Sum_probs=62.9

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      .+.|++||......++.++|+||+|++++++++|..|+.......  .. .              ...+..   ...+..
T Consensus       185 ~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~-~--------------~~~~~~---~~~~~~  244 (280)
T cd05581         185 TAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL--TF-Q--------------KILKLE---YSFPPN  244 (280)
T ss_pred             CccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH--HH-H--------------HHHhcC---CCCCCc
Confidence            468999999988889999999999999999999999986332111  00 0              111111   122222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCH----HHHHH
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSM----VDIVH  129 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~----~ev~~  129 (160)
                      ....+..++.+|++.+|.+||++    .+++.
T Consensus       245 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         245 FPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             cCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            24567899999999999999999    66543

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.10  E-value=4e-11  Score=96.56  Aligned_cols=88  Identities=15%  Similarity=0.040  Sum_probs=64.7

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +..|++||.+..+..+..+|+|+|||++++|+.|++||...+..+.-                 .++++-..   ++|..
T Consensus       250 TAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliF-----------------qkI~~l~y---~fp~~  309 (604)
T KOG0592|consen  250 TAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIF-----------------QKIQALDY---EFPEG  309 (604)
T ss_pred             eecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHH-----------------HHHHHhcc---cCCCC
Confidence            35799999999999999999999999999999999999744432221                 12221111   22222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      -.....+|+.+-+..||.+|.+..+|.+
T Consensus       310 fp~~a~dLv~KLLv~dp~~Rlt~~qIk~  337 (604)
T KOG0592|consen  310 FPEDARDLIKKLLVRDPSDRLTSQQIKA  337 (604)
T ss_pred             CCHHHHHHHHHHHccCccccccHHHHhh
Confidence            2245578888899999999999987755

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.10  E-value=1e-10  Score=91.18  Aligned_cols=105  Identities=10%  Similarity=0.043  Sum_probs=61.5

Q ss_pred             CCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCC---ccccccc----hhhhhc-cc
Q 047377           22 RPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGN---EGRKVKR----VKEWMD-EI   92 (160)
Q Consensus        22 ~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~----~~~~~d-~~   92 (160)
                      .+.|+|||.+.. ..++.++||||||++++++++|+.||..........  ....+.   ..+....    ....+. ..
T Consensus       181 ~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (342)
T cd07854         181 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQ--LILESVPVVREEDRNELLNVIPSFVRNDG  258 (342)
T ss_pred             cccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHhcCCCChHHhhhhhhhhhhhhhhcc
Confidence            457999998765 457889999999999999999999996332111100  111000   0000000    000000 00


Q ss_pred             cCCCCCCH-----HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           93 LLQDSISM-----EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        93 l~~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      . ....+.     .....+.+++..|+..+|.+||++.+++.
T Consensus       259 ~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         259 G-EPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             c-ccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence            0 000111     12345678999999999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.10  E-value=7.5e-11  Score=91.57  Aligned_cols=108  Identities=11%  Similarity=0.119  Sum_probs=63.9

Q ss_pred             CCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchhHH-HHHHHHHcCCccc-----cccchhhhhccccC
Q 047377           22 RPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLW-AKVEGILEGNEGR-----KVKRVKEWMDEILL   94 (160)
Q Consensus        22 ~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~d~~l~   94 (160)
                      ...|++||.+.. ..++.++||||||++++|+++|+.||........ ..+..........     ....+...++....
T Consensus       174 ~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  253 (334)
T cd07855         174 TRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPR  253 (334)
T ss_pred             cccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhccc
Confidence            457999999865 4588999999999999999999999974332111 1111111000000     00001111110000


Q ss_pred             CCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 QDSIS-----MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 ~~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ....+     ......+..++.+|++.+|.+||++.+++.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         254 KQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             CCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            01111     122456789999999999999999999877

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.10  E-value=4.1e-11  Score=93.43  Aligned_cols=115  Identities=11%  Similarity=0.076  Sum_probs=66.4

Q ss_pred             CCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccc-----cccchhhhhc--cc
Q 047377           22 RPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGR-----KVKRVKEWMD--EI   92 (160)
Q Consensus        22 ~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~d--~~   92 (160)
                      .+.|+|||.+.. ..++.++||||||++++|+++|+.||...... ....+..........     ........+.  +.
T Consensus       177 ~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (342)
T cd07879         177 TRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPK  256 (342)
T ss_pred             eecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCC
Confidence            457999999876 46889999999999999999999999743311 111111111000000     0000000000  00


Q ss_pred             cCCCCCC---HHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHcccc
Q 047377           93 LLQDSIS---MEGVMRAMGIAIACLHKDPSKRPSMVDIVHA--VSKSDD  136 (160)
Q Consensus        93 l~~~~~~---~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~--L~~l~~  136 (160)
                      .......   ......+.+++.+|++.+|.+||++.+++..  ++....
T Consensus       257 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         257 YPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             cccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence            0000000   0122456789999999999999999999854  655543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.10  E-value=6.9e-11  Score=89.87  Aligned_cols=88  Identities=19%  Similarity=0.095  Sum_probs=61.3

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ..+.|++||.+..+..+.++||||||++++++++|..|+.....  .........               ...   ..+.
T Consensus       160 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~---------------~~~---~~~~  219 (290)
T cd05580         160 GTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP--IQIYEKILE---------------GKV---RFPS  219 (290)
T ss_pred             CCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhc---------------CCc---cCCc
Confidence            45789999999888889999999999999999999999863331  110001111               111   1222


Q ss_pred             HHHHHHHHHHHHccccCCCCCC-----CHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRP-----SMVDIV  128 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~  128 (160)
                      .....+.+++.+||..+|.+|+     +..+++
T Consensus       220 ~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~  252 (290)
T cd05580         220 FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK  252 (290)
T ss_pred             cCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence            2234667899999999999998     555554

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.09  E-value=8.1e-11  Score=95.64  Aligned_cols=40  Identities=8%  Similarity=-0.116  Sum_probs=35.5

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAI   59 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~   59 (160)
                      .+++.|+|||++.+..++.++|||||||+++|+++|..++
T Consensus       323 ~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l  362 (461)
T PHA03211        323 AGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL  362 (461)
T ss_pred             CCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence            3568999999999889999999999999999999877654

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.09  E-value=5.6e-11  Score=91.22  Aligned_cols=105  Identities=10%  Similarity=-0.062  Sum_probs=63.5

Q ss_pred             CCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchh------hhhccc
Q 047377           21 KRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVK------EWMDEI   92 (160)
Q Consensus        21 ~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------~~~d~~   92 (160)
                      .++.|+|||.+.. ..++.++||||+|++++|+++|+.||...... ....+...+....   .....      ...+..
T Consensus       166 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  242 (309)
T cd07872         166 VTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPT---EETWPGISSNDEFKNYN  242 (309)
T ss_pred             ccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC---HHHHhhhcchhhhhhhh
Confidence            3568999999865 45789999999999999999999999743321 1111111111000   00000      000000


Q ss_pred             cCCCC-------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           93 LLQDS-------ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        93 l~~~~-------~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      . +..       ........+.+++.+|++.+|.+||++.|++.
T Consensus       243 ~-~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         243 F-PKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             c-CccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence            0 000       00012335678999999999999999999876

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.08  E-value=7.6e-11  Score=90.42  Aligned_cols=105  Identities=10%  Similarity=0.009  Sum_probs=62.5

Q ss_pred             CCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchhhhhc------ccc
Q 047377           22 RPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVKEWMD------EIL   93 (160)
Q Consensus        22 ~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d------~~l   93 (160)
                      .+.|+|||.+.+ ..++.++||||+|++++|+++|..||...... ....+........   ......+-+      ..+
T Consensus       171 ~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  247 (309)
T cd07845         171 TLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPN---ESIWPGFSDLPLVGKFTL  247 (309)
T ss_pred             cccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC---hhhchhhhcccccccccc
Confidence            356999999865 45789999999999999999999998733221 1111111111000   000000000      000


Q ss_pred             CCCCCC------HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           94 LQDSIS------MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        94 ~~~~~~------~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ....+.      ......+.+++.+|++.||.+||++.+++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         248 PKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             cCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            000000      012345678999999999999999999886

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.08  E-value=8.5e-11  Score=90.86  Aligned_cols=116  Identities=11%  Similarity=0.062  Sum_probs=69.0

Q ss_pred             CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhH-HHHHHHHHcCCccc-----cccchhhhhccccC
Q 047377           22 RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVL-WAKVEGILEGNEGR-----KVKRVKEWMDEILL   94 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~d~~l~   94 (160)
                      .+.|+|||.+... .++.++|+||||++++++++|..||....... ...+........++     ........+...-.
T Consensus       169 ~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (330)
T cd07834         169 TRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPK  248 (330)
T ss_pred             ccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhccc
Confidence            4569999999887 78999999999999999999999997433211 11111111000000     00000111110000


Q ss_pred             CCCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHccccC
Q 047377           95 QDSI-----SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA--VSKSDDS  137 (160)
Q Consensus        95 ~~~~-----~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~--L~~l~~~  137 (160)
                      ....     .......+.+++.+||+.+|.+||++.+++..  ++.+...
T Consensus       249 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~  298 (330)
T cd07834         249 KPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP  298 (330)
T ss_pred             CCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence            0000     01123457889999999999999999999873  6655543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.08  E-value=8.4e-11  Score=88.79  Aligned_cols=88  Identities=16%  Similarity=0.107  Sum_probs=59.6

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|++||+...+.++.++|+||+|++++++++|+.||..... .....+....              ...   ....+.
T Consensus       157 ~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--------------~~~---~~~~~~  219 (277)
T cd05577         157 TPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRT--------------LEM---AVEYPD  219 (277)
T ss_pred             CCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcc--------------ccc---cccCCc
Confidence            4689999999888899999999999999999999999863221 0001100000              000   111222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVD  126 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~e  126 (160)
                      .....+..++.+||+.+|.+||++.+
T Consensus       220 ~~~~~~~~li~~~l~~~p~~R~~~~~  245 (277)
T cd05577         220 KFSPEAKDLCEALLQKDPEKRLGCRG  245 (277)
T ss_pred             cCCHHHHHHHHHHccCChhHccCCCc
Confidence            22345688999999999999995554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.08  E-value=3.6e-11  Score=90.59  Aligned_cols=107  Identities=12%  Similarity=-0.003  Sum_probs=62.5

Q ss_pred             CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhH-HHHHHHHHcCCccccccchhhh--h-ccccCCC
Q 047377           22 RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVL-WAKVEGILEGNEGRKVKRVKEW--M-DEILLQD   96 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~-d~~l~~~   96 (160)
                      .+.|++||.+.+. .++.++||||||++++|+++|..|+....... ...+.........+.-......  . .... ..
T Consensus       164 ~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  242 (287)
T cd07840         164 TLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKP-KK  242 (287)
T ss_pred             ccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccc-cc
Confidence            4569999977643 57899999999999999999999986433211 1111111110000000000000  0 0000 00


Q ss_pred             CCC--------HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           97 SIS--------MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        97 ~~~--------~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ..+        ..+...+.+++.+||..+|.+||++++++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         243 PYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             cchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            000        012456789999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.08  E-value=7.4e-11  Score=88.40  Aligned_cols=90  Identities=9%  Similarity=0.020  Sum_probs=63.5

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +.+.|+|||......++.++|+||||++++++++|+.||.....  ...+.....               ... ....|.
T Consensus       171 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~---------------~~~-~~~~p~  232 (264)
T cd06653         171 GTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA--MAAIFKIAT---------------QPT-KPMLPD  232 (264)
T ss_pred             CcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH--HHHHHHHHc---------------CCC-CCCCCc
Confidence            45689999999888899999999999999999999999863211  111111110               111 223344


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+.+++.+|+. +|.+||+..+++.
T Consensus       233 ~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         233 GVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             ccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence            444567889999998 5799999987764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.07  E-value=1.2e-10  Score=91.48  Aligned_cols=42  Identities=10%  Similarity=0.048  Sum_probs=38.9

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDE   61 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~   61 (160)
                      .+++.|+|||.+.+..++.++|||||||+++||++|+.||..
T Consensus       197 ~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~  238 (363)
T cd05628         197 VGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (363)
T ss_pred             cCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence            467899999999988999999999999999999999999963

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.07  E-value=1.6e-10  Score=90.69  Aligned_cols=42  Identities=10%  Similarity=0.048  Sum_probs=38.8

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDE   61 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~   61 (160)
                      .+++.|+|||.+.+..++.++|||||||+++||++|..||..
T Consensus       197 ~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~  238 (360)
T cd05627         197 VGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (360)
T ss_pred             CCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence            456899999999999999999999999999999999999964

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.07  E-value=1.3e-10  Score=90.23  Aligned_cols=114  Identities=10%  Similarity=0.058  Sum_probs=65.4

Q ss_pred             CCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCcccc-----ccchhhhhccccC
Q 047377           22 RPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRK-----VKRVKEWMDEILL   94 (160)
Q Consensus        22 ~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~d~~l~   94 (160)
                      .+.|++||.+.. ..++.++||||||++++++++|+.||...... ....+.........+.     ......+++... 
T Consensus       175 ~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  253 (337)
T cd07852         175 TRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLP-  253 (337)
T ss_pred             cccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcc-
Confidence            457999998755 45788999999999999999999998632211 1111001000000000     000000111000 


Q ss_pred             CCC------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHcccc
Q 047377           95 QDS------ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA--VSKSDD  136 (160)
Q Consensus        95 ~~~------~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~--L~~l~~  136 (160)
                      ...      ........+.+++.+||+.+|.+||++.+++..  ++...+
T Consensus       254 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~  303 (337)
T cd07852         254 SRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHN  303 (337)
T ss_pred             cccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhcc
Confidence            000      000123567889999999999999999999874  444433

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.07  E-value=1.4e-10  Score=87.24  Aligned_cols=105  Identities=12%  Similarity=0.032  Sum_probs=63.0

Q ss_pred             CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchh---hh--hccccC
Q 047377           22 RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVK---EW--MDEILL   94 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~--~d~~l~   94 (160)
                      ...|+|||.+... .++.++|+||||++++|+++|..|+...... ....+........   .....   ..  .+...+
T Consensus       161 ~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  237 (282)
T cd07829         161 TLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPT---EESWPGVTKLPDYKPTFP  237 (282)
T ss_pred             CcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCc---HHHHHhhccccccccccc
Confidence            3569999998776 7889999999999999999999998633211 1111111111000   00000   00  000000


Q ss_pred             --CCCCC----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 --QDSIS----MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 --~~~~~----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                        .....    ......+.+++.+||..+|.+||++.+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         238 KFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             ccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence              00000    011346789999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.07  E-value=9.7e-11  Score=86.68  Aligned_cols=86  Identities=16%  Similarity=0.101  Sum_probs=61.6

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ....|++||.......+.++|+||||++++++++|..||.........   ..+              ....+   ..+.
T Consensus       155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~---~~~--------------~~~~~---~~~~  214 (250)
T cd05123         155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIY---EKI--------------LKDPL---RFPE  214 (250)
T ss_pred             CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH---HHH--------------hcCCC---CCCC
Confidence            456899999998888899999999999999999999999633321110   111              11111   2222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVD  126 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~e  126 (160)
                      .....+.+++.+|+..+|++||++.+
T Consensus       215 ~~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         215 FLSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             CCCHHHHHHHHHHhcCCHhhCCCccc
Confidence            22456688999999999999999954

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.06  E-value=1e-10  Score=89.02  Aligned_cols=106  Identities=9%  Similarity=0.021  Sum_probs=62.6

Q ss_pred             CCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCcccc---ccchhhhhccccCCCC
Q 047377           23 PSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRK---VKRVKEWMDEILLQDS   97 (160)
Q Consensus        23 ~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~d~~l~~~~   97 (160)
                      +.|+|||.+.. ..++.++|+||||++++|+++|..++..... .........+.......   ............ ...
T Consensus       166 ~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  244 (298)
T cd07841         166 RWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKP-FPP  244 (298)
T ss_pred             eeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccc-cCC
Confidence            56999998854 4578899999999999999999877753221 11111111110000000   000001111010 111


Q ss_pred             CC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           98 IS-----MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        98 ~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .+     ......+.+++.+||..+|++||++.+++.
T Consensus       245 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~  281 (298)
T cd07841         245 TPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE  281 (298)
T ss_pred             cchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence            11     123456789999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.06  E-value=9.6e-11  Score=88.44  Aligned_cols=110  Identities=15%  Similarity=0.033  Sum_probs=63.0

Q ss_pred             CCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCcccc------ccchhhhhccc
Q 047377           21 KRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRK------VKRVKEWMDEI   92 (160)
Q Consensus        21 ~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~d~~   92 (160)
                      ..+.|+|||.+... .++.++||||+|++++|+++|.+++..... .....+...+.......      .........+.
T Consensus       162 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (286)
T cd07832         162 ATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPE  241 (286)
T ss_pred             CcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCC
Confidence            34679999987654 468999999999999999999887763321 11111111111000000      00000000000


Q ss_pred             cCC---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           93 LLQ---DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        93 l~~---~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ...   .+...+....+.+++.+|+..+|.+||++++++..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         242 SKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             CCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            000   00001123567899999999999999999998763

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.06  E-value=1.6e-10  Score=91.29  Aligned_cols=93  Identities=14%  Similarity=0.083  Sum_probs=59.4

Q ss_pred             CCCCCcchhhHhhhc----CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           20 SKRPSMVDIVYALSK----SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~----~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      .+++.|+|||.+...    .++.++||||+||+++||++|+.||......  .......               +... .
T Consensus       204 ~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~--~~~~~i~---------------~~~~-~  265 (370)
T cd05621         204 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV--GTYSKIM---------------DHKN-S  265 (370)
T ss_pred             CCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH--HHHHHHH---------------hCCc-c
Confidence            356899999998754    3788999999999999999999999743321  1111111               1110 0


Q ss_pred             CCCCH--HHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 047377           96 DSISM--EGVMRAMGIAIACLHKDPSK--RPSMVDIVHA  130 (160)
Q Consensus        96 ~~~~~--~~~~~~~~l~~~C~~~~p~~--RPs~~ev~~~  130 (160)
                      ...+.  .....+..++.+|+..++.+  |+++.++++.
T Consensus       266 ~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         266 LNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             cCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence            11111  22344567777788755543  8899988774

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.06  E-value=1.3e-10  Score=88.45  Aligned_cols=105  Identities=10%  Similarity=-0.038  Sum_probs=62.4

Q ss_pred             CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhH-HHHHHHHHcCCccccccchhhhh--------cc
Q 047377           22 RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVL-WAKVEGILEGNEGRKVKRVKEWM--------DE   91 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------d~   91 (160)
                      .+.|++||.+... .++.++||||||++++|+++|+.|+....... ...+.....+..   ......+.        ++
T Consensus       180 ~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  256 (302)
T cd07864         180 TLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPC---PAVWPDVIKLPYFNTMKP  256 (302)
T ss_pred             ccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC---hhhccccccccccccccc
Confidence            4579999988654 46889999999999999999999987332211 111111111000   00000000        00


Q ss_pred             cc-CC---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           92 IL-LQ---DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        92 ~l-~~---~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .- ..   ..........+.+++..||+.+|.+||++.+++.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         257 KKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             ccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            00 00   0000012356789999999999999999998875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.05  E-value=1.6e-10  Score=86.44  Aligned_cols=91  Identities=18%  Similarity=0.189  Sum_probs=62.1

Q ss_pred             cchhhHhhh--cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC-CHH
Q 047377           25 MVDIVYALS--KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI-SME  101 (160)
Q Consensus        25 y~aPE~~~~--~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~-~~~  101 (160)
                      |||||.+..  ..|+.+|||||+||+++|+.||+.|+.. ....+..+.....|       ..     |.| .... ..+
T Consensus       233 YmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~-w~svfeql~~Vv~g-------dp-----p~l-~~~~~~~~  298 (361)
T KOG1006|consen  233 YMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRK-WDSVFEQLCQVVIG-------DP-----PIL-LFDKECVH  298 (361)
T ss_pred             ccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcch-HHHHHHHHHHHHcC-------CC-----Cee-cCcccccc
Confidence            999998853  2489999999999999999999999962 22233333333321       00     122 1111 122


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ....+...+..|+.+|..+||...++..
T Consensus       299 ~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  299 YSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             cCHHHHHHHHHHhhcccccCcchhhhhc
Confidence            3456778888999999999999887654

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.05  E-value=1.8e-10  Score=87.57  Aligned_cols=107  Identities=12%  Similarity=0.030  Sum_probs=61.9

Q ss_pred             CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccc---cccchhhhhc--cccC
Q 047377           22 RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGR---KVKRVKEWMD--EILL   94 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~d--~~l~   94 (160)
                      .+.|++||++.+. .++.++||||+|++++++++|..||..... .....+..........   ....+.....  +.. 
T Consensus       166 ~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  244 (294)
T PLN00009        166 TLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKW-  244 (294)
T ss_pred             eecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccC-
Confidence            4689999988664 578899999999999999999999863221 1111111111000000   0000000000  000 


Q ss_pred             CCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 QDS----ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 ~~~----~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ...    ........+.+++.+|++.+|.+||++.+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        245 PPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             CCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            000    00111234678999999999999999999886

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.05  E-value=2.4e-10  Score=90.31  Aligned_cols=95  Identities=14%  Similarity=0.058  Sum_probs=59.4

Q ss_pred             CCCCCcchhhHhhhc----CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           20 SKRPSMVDIVYALSK----SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~----~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      .+++.|+|||.+...    .++.++|||||||+++||++|..||.......  .......      ..       ..+ .
T Consensus       204 ~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~--~~~~i~~------~~-------~~~-~  267 (371)
T cd05622         204 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG--TYSKIMN------HK-------NSL-T  267 (371)
T ss_pred             ccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH--HHHHHHc------CC-------Ccc-c
Confidence            356889999998653    37899999999999999999999997433211  1111111      00       001 0


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSK--RPSMVDIVHA  130 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~--RPs~~ev~~~  130 (160)
                      ..........+..++..|+..++.+  |+++.++++.
T Consensus       268 ~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h  304 (371)
T cd05622         268 FPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  304 (371)
T ss_pred             CCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence            0111122345577888898744433  6788888764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.05  E-value=4.3e-11  Score=89.89  Aligned_cols=107  Identities=18%  Similarity=0.111  Sum_probs=76.6

Q ss_pred             hHhhhhcccCCCCCCCcchhhHhhhcCCc---ccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccch
Q 047377            9 GIAIACLHKDPSKRPSMVDIVYALSKSDD---LLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRV   85 (160)
Q Consensus         9 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~s---~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .+.+.|.++.  -.|.||+||.+....-+   ..+|.|||+|++||+.|+.-||..-.. .-    -            -
T Consensus       338 kfsfqe~gr~--y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlsp-me----c------------g  398 (448)
T KOG0195|consen  338 KFSFQEVGRA--YSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSP-ME----C------------G  398 (448)
T ss_pred             eeeeeccccc--cCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCc-hh----h------------h
Confidence            3455564433  34889999999776543   569999999999999999999972110 00    0            0


Q ss_pred             hhhhccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377           86 KEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus        86 ~~~~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      .++.-.+| +..+|......+.+++.-|...||.+||.|..|+-.|++..
T Consensus       399 mkialegl-rv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  399 MKIALEGL-RVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             hhhhhccc-cccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            11111234 44566666778889999999999999999999999998763

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.05  E-value=2.2e-10  Score=86.47  Aligned_cols=104  Identities=12%  Similarity=-0.007  Sum_probs=62.1

Q ss_pred             CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhhc-cccCCCCC
Q 047377           22 RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWMD-EILLQDSI   98 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d-~~l~~~~~   98 (160)
                      .+.|++||.+... .++.++|+||||++++++++|+.|+..... .....+........   ......+.+ +.+ ...+
T Consensus       163 ~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~  238 (284)
T cd07836         163 TLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPT---ESTWPGISQLPEY-KPTF  238 (284)
T ss_pred             cccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCC---hhhHHHHhcCchh-cccc
Confidence            4679999988654 468899999999999999999999863221 11111111110000   000000000 000 0000


Q ss_pred             -----------CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 -----------SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 -----------~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                                 .......+.+++.+|++.+|.+||++.+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         239 PRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             cCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                       0112345678999999999999999999874

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.04  E-value=2.5e-10  Score=89.08  Aligned_cols=108  Identities=10%  Similarity=0.111  Sum_probs=62.6

Q ss_pred             CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhHH-HHHHHHHcCCccc-----cccchhhhhccccC
Q 047377           22 RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVLW-AKVEGILEGNEGR-----KVKRVKEWMDEILL   94 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~d~~l~   94 (160)
                      .+.|+|||.+... .++.++||||+|++++|+++|+.||........ ..+.........+     .......++.....
T Consensus       178 ~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (343)
T cd07851         178 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQ  257 (343)
T ss_pred             cccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccc
Confidence            4579999998653 678999999999999999999999863322111 1111111000000     00000000000000


Q ss_pred             --CCCCC---HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 --QDSIS---MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 --~~~~~---~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                        ...+.   ......+.+++.+|+..+|.+||++.+|+.
T Consensus       258 ~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         258 MPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             cCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence              00000   012356789999999999999999999875

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.04  E-value=2.4e-10  Score=88.72  Aligned_cols=105  Identities=11%  Similarity=-0.001  Sum_probs=67.1

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc--hhHHHHHHHHHcCCc------------------cc--
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG--KVLWAKVEGILEGNE------------------GR--   80 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~--~~~~~~~~~~~~~~~------------------~~--   80 (160)
                      -.|.|||++.+-..+.++||||+||+|.|+.+|..-|....  ..+  .+.+.+-|.-                  .+  
T Consensus       273 RHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHL--aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~  350 (415)
T KOG0671|consen  273 RHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHL--AMMERILGPIPSRMIKKTRKEKYFRRGRLDWP  350 (415)
T ss_pred             cccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHH--HHHHHhhCCCcHHHhhhhhhHhhhhcccccCc
Confidence            36999999999999999999999999999999999887433  211  1112111100                  00  


Q ss_pred             ---cccchhhhhccccCC---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           81 ---KVKRVKEWMDEILLQ---DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        81 ---~~~~~~~~~d~~l~~---~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                         -.+....+.++..+.   -.....+...+.+|+.+++..||.+|.+..|++.
T Consensus       351 e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~  405 (415)
T KOG0671|consen  351 EVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS  405 (415)
T ss_pred             cccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence               000001111111100   0112245667999999999999999999998875

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.04  E-value=2.9e-10  Score=86.29  Aligned_cols=104  Identities=12%  Similarity=0.034  Sum_probs=61.2

Q ss_pred             CCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCch--hHHHHHHHHHcCCccccccchhhhh------c--
Q 047377           22 RPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGK--VLWAKVEGILEGNEGRKVKRVKEWM------D--   90 (160)
Q Consensus        22 ~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~------d--   90 (160)
                      .+.|+|||...+ ..++.++||||+|++++++++|..||.....  .........+....   ........      .  
T Consensus       166 ~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  242 (291)
T cd07844         166 TLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPT---EETWPGVSSNPEFKPYS  242 (291)
T ss_pred             ccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCC---hhhhhhhhhcccccccc
Confidence            467999998865 4578899999999999999999999863221  11111111111000   00000000      0  


Q ss_pred             ------cccCCCCCC-HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           91 ------EILLQDSIS-MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        91 ------~~l~~~~~~-~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                            ..+ ....+ ......+.+++.+|++.+|.+||++.+++.
T Consensus       243 ~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         243 FPFYPPRPL-INHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             ccccCChhH-HHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence                  000 00000 001145678999999999999999998864

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.03  E-value=1.5e-10  Score=89.86  Aligned_cols=104  Identities=11%  Similarity=0.042  Sum_probs=63.3

Q ss_pred             CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhh--------cc
Q 047377           22 RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWM--------DE   91 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--------d~   91 (160)
                      .+.|+|||.+.+. .++.++|+||+|++++|+++|..|+..... .....+...+....   ........        ..
T Consensus       196 ~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~  272 (335)
T PTZ00024        196 TLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPN---EDNWPQAKKLPLYTEFTP  272 (335)
T ss_pred             ccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCc---hhhCcchhhcccccccCc
Confidence            4679999998754 468999999999999999999999874332 11122222221000   00000000        00


Q ss_pred             ccCCC---CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           92 ILLQD---SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        92 ~l~~~---~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .. ..   .........+.+++.+|++.+|.+||++.+++.
T Consensus       273 ~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        273 RK-PKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             CC-cccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence            00 00   000112345678999999999999999999986

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.02  E-value=7.2e-10  Score=90.70  Aligned_cols=99  Identities=15%  Similarity=0.102  Sum_probs=67.7

Q ss_pred             hhhcccCCCCCCCcchhhHhh---hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhh
Q 047377           12 IACLHKDPSKRPSMVDIVYAL---SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEW   88 (160)
Q Consensus        12 ~~~~~~~~~~~~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (160)
                      +.|.+..--++|-|||||++.   .|+|+.|+||||+||++.|+..+++|.-  +.+....+..+..+            
T Consensus       175 i~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlF--nMNAMSALYHIAQN------------  240 (948)
T KOG0577|consen  175 IMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF--NMNAMSALYHIAQN------------  240 (948)
T ss_pred             hcCchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCcc--CchHHHHHHHHHhc------------
Confidence            556666666789999999985   5899999999999999999999999953  22222222222221            


Q ss_pred             hccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 047377           89 MDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIV  128 (160)
Q Consensus        89 ~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~  128 (160)
                      -.|.| ..+-..   ..+..++-.|+++-|.+||+..+++
T Consensus       241 esPtL-qs~eWS---~~F~~Fvd~CLqKipqeRptse~ll  276 (948)
T KOG0577|consen  241 ESPTL-QSNEWS---DYFRNFVDSCLQKIPQERPTSEELL  276 (948)
T ss_pred             CCCCC-CCchhH---HHHHHHHHHHHhhCcccCCcHHHHh
Confidence            01334 222222   3445666789999999999977664

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.02  E-value=1.7e-10  Score=93.14  Aligned_cols=94  Identities=19%  Similarity=0.178  Sum_probs=73.7

Q ss_pred             CCCCcchhhHhhhcCCc-ccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDD-LLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s-~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      +...|-|||.+.+..|+ ..+||||+||++|-+++|+.||.+-+                 +.+.+-.++|=..   ..|
T Consensus       180 GSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAN-----------------DSETLTmImDCKY---tvP  239 (864)
T KOG4717|consen  180 GSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAN-----------------DSETLTMIMDCKY---TVP  239 (864)
T ss_pred             chhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccccc-----------------chhhhhhhhcccc---cCc
Confidence            34579999999999887 67999999999999999999996211                 1333344555444   457


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH--HHHcc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH--AVSKS  134 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~--~L~~l  134 (160)
                      .....++.+|+..++.+||++|.+.++|+.  .|+.+
T Consensus       240 shvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~  276 (864)
T KOG4717|consen  240 SHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAG  276 (864)
T ss_pred             hhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCC
Confidence            777888999999999999999999988865  44444

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.02  E-value=1.3e-10  Score=90.75  Aligned_cols=54  Identities=17%  Similarity=0.114  Sum_probs=45.6

Q ss_pred             HhHhhhhcccC----CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCC
Q 047377            8 MGIAIACLHKD----PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDE   61 (160)
Q Consensus         8 ~~~~~~~~~~~----~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~   61 (160)
                      ||+|..|..+.    .++.|-|||||++...+|+.|+|+||.|+++|++++|+.||+.
T Consensus       159 FGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a  216 (429)
T KOG0595|consen  159 FGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA  216 (429)
T ss_pred             cchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence            56666554333    3556899999999999999999999999999999999999983

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.02  E-value=7.9e-11  Score=92.79  Aligned_cols=87  Identities=17%  Similarity=0.135  Sum_probs=64.9

Q ss_pred             cCCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCC
Q 047377           17 KDPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        17 ~~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      +.-+++|.|+|||.+....|+..+|-|||||+++||+.|++||+.++..                 +-+..+.+...   
T Consensus       508 kTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~-----------------elF~aI~ehnv---  567 (683)
T KOG0696|consen  508 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED-----------------ELFQAIMEHNV---  567 (683)
T ss_pred             eeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH-----------------HHHHHHHHccC---
Confidence            3345669999999999999999999999999999999999999854421                 11123333433   


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCC
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPS  123 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs  123 (160)
                      .||....++...+...-+.+.|.+|..
T Consensus       568 syPKslSkEAv~ickg~ltK~P~kRLG  594 (683)
T KOG0696|consen  568 SYPKSLSKEAVAICKGLLTKHPGKRLG  594 (683)
T ss_pred             cCcccccHHHHHHHHHHhhcCCccccC
Confidence            566666666677777777888888853

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.02  E-value=1.5e-10  Score=93.02  Aligned_cols=87  Identities=16%  Similarity=0.082  Sum_probs=59.5

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      .-++|-|||||++.+..|+..+|.||+||+++|++.|-+||..+... .+..+...-                ..+ ..+
T Consensus       348 tVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr----------------~~l-~fP  410 (550)
T KOG0605|consen  348 TVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWR----------------ETL-KFP  410 (550)
T ss_pred             ccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh----------------hhc-cCC
Confidence            44679999999999999999999999999999999999999843321 111111100                011 111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCC
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPS  123 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs  123 (160)
                      -......+..+++.+|+. ||.+|-.
T Consensus       411 ~~~~~s~eA~DLI~rll~-d~~~RLG  435 (550)
T KOG0605|consen  411 EEVDLSDEAKDLITRLLC-DPENRLG  435 (550)
T ss_pred             CcCcccHHHHHHHHHHhc-CHHHhcC
Confidence            111222556788888888 9999986

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.01  E-value=1.6e-10  Score=89.62  Aligned_cols=106  Identities=12%  Similarity=0.034  Sum_probs=62.9

Q ss_pred             CCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhhcc-------
Q 047377           21 KRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWMDE-------   91 (160)
Q Consensus        21 ~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~-------   91 (160)
                      +++.|+|||++..+ .++.++|+||+|++++++++|..|+..... .....+...+....   ......+..+       
T Consensus       171 g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  247 (332)
T cd07857         171 ATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPD---EETLSRIGSPKAQNYIR  247 (332)
T ss_pred             cCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCC---HHHHHhhhhhhHHHHHH
Confidence            45679999988664 578999999999999999999999863321 11111111111000   0000000000       


Q ss_pred             ---ccCCCCCC---HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           92 ---ILLQDSIS---MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        92 ---~l~~~~~~---~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                         ......++   ......+.+++.+|++.+|.+||++.+++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         248 SLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             hccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence               00000000   011346788999999999999999999864

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.01  E-value=1.6e-10  Score=89.76  Aligned_cols=114  Identities=13%  Similarity=0.151  Sum_probs=66.9

Q ss_pred             CCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccc-----cccchhhhhc-ccc
Q 047377           22 RPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGR-----KVKRVKEWMD-EIL   93 (160)
Q Consensus        22 ~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~d-~~l   93 (160)
                      .+.|++||.+.. ..++.++||||||++++++++|+.||...... ....+.........+     ......+++. -..
T Consensus       168 ~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (328)
T cd07856         168 TRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPK  247 (328)
T ss_pred             cccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccc
Confidence            467999998766 46889999999999999999999998643221 111111111000000     0000001110 000


Q ss_pred             CCCCCCH-----HHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHcccc
Q 047377           94 LQDSISM-----EGVMRAMGIAIACLHKDPSKRPSMVDIVHA--VSKSDD  136 (160)
Q Consensus        94 ~~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~--L~~l~~  136 (160)
                       ....+.     .....+.+++.+|++.+|.+||++.+++..  ++..+.
T Consensus       248 -~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~  296 (328)
T cd07856         248 -REPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHD  296 (328)
T ss_pred             -cCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccC
Confidence             111111     123567889999999999999999998765  444443

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.99  E-value=2.9e-10  Score=88.31  Aligned_cols=42  Identities=10%  Similarity=0.018  Sum_probs=36.6

Q ss_pred             CCCCCcchhhHhh-----hcCCcccCccCCCeeehhhhhhCCCCCCC
Q 047377           20 SKRPSMVDIVYAL-----SKSDDLLSDISDDALSSSQLISGEKAIDE   61 (160)
Q Consensus        20 ~~~~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltg~~p~~~   61 (160)
                      .+++.|+|||++.     .+.++.++|||||||+++|+++|+.||..
T Consensus       164 ~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~  210 (332)
T cd05623         164 VGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA  210 (332)
T ss_pred             ccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence            3567999999986     34678999999999999999999999973

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.99  E-value=7.3e-11  Score=87.39  Aligned_cols=80  Identities=10%  Similarity=-0.032  Sum_probs=56.8

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      .+.|++||....+.++.++|+||+|++++|+++|..|+.....        ...           ...     ....+..
T Consensus       145 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~--------~~~-----------~~~-----~~~~~~~  200 (237)
T cd05576         145 ENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPS--------GIN-----------THT-----TLNIPEW  200 (237)
T ss_pred             CccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCch--------hcc-----------ccc-----ccCCccc
Confidence            3569999998888899999999999999999999987642110        000           000     0112222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHH
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMV  125 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~  125 (160)
                      ....+..++.+|++.||++||++.
T Consensus       201 ~~~~~~~li~~~l~~dp~~R~~~~  224 (237)
T cd05576         201 VSEEARSLLQQLLQFNPTERLGAG  224 (237)
T ss_pred             CCHHHHHHHHHHccCCHHHhcCCC
Confidence            234567899999999999999973

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.98  E-value=2.8e-10  Score=86.39  Aligned_cols=108  Identities=16%  Similarity=0.075  Sum_probs=61.4

Q ss_pred             CCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhH--HHHHHHHHcCCcccc-------ccchhhhhc
Q 047377           21 KRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVL--WAKVEGILEGNEGRK-------VKRVKEWMD   90 (160)
Q Consensus        21 ~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~~~~d   90 (160)
                      ..+.|+|||...+. .++.++||||||++++|+++|..||.......  ....+..+.....+.       ......+..
T Consensus       165 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (291)
T cd07870         165 VTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFL  244 (291)
T ss_pred             ccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhcc
Confidence            35789999988654 47889999999999999999999986322111  011111110000000       000000000


Q ss_pred             cccCCCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           91 EILLQDSIS-----MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        91 ~~l~~~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ... .....     ......+.+++.+|+..+|.+||++.+++.
T Consensus       245 ~~~-~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         245 PCK-PQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             ccC-CcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence            000 00000     001235678899999999999999998864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=98.98  E-value=2.4e-10  Score=85.91  Aligned_cols=106  Identities=14%  Similarity=0.119  Sum_probs=74.0

Q ss_pred             HhHhhhhcc------cCCCCCCCcchhhHhhh------cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHc
Q 047377            8 MGIAIACLH------KDPSKRPSMVDIVYALS------KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILE   75 (160)
Q Consensus         8 ~~~~~~~~~------~~~~~~~~y~aPE~~~~------~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~   75 (160)
                      .+++++|.-      ++-+++|||+|||.+..      ..|+..+|.|+.||+++-++.|.+||....+.+...  ....
T Consensus       165 sDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR--~Ime  242 (411)
T KOG0599|consen  165 SDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLR--MIME  242 (411)
T ss_pred             eccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHH--HHHh
Confidence            456666643      34577899999998853      467899999999999999999999996333222222  2222


Q ss_pred             CCccccccchhhhhccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           76 GNEGRKVKRVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        76 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      |..             .. ..+...+......+|+.+|++.||.+|-+.+|.+.
T Consensus       243 Gky-------------qF-~speWadis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  243 GKY-------------QF-RSPEWADISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             ccc-------------cc-CCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence            111             11 12223345566789999999999999999998876

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.98  E-value=7.5e-10  Score=86.50  Aligned_cols=105  Identities=10%  Similarity=0.054  Sum_probs=62.3

Q ss_pred             CCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccch---------hhhhc
Q 047377           22 RPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRV---------KEWMD   90 (160)
Q Consensus        22 ~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~d   90 (160)
                      .+.|+|||.... ..++.++||||||++++|+++|+.||...... ....+......    .....         ...+.
T Consensus       180 ~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  255 (345)
T cd07877         180 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT----PGAELLKKISSESARNYIQ  255 (345)
T ss_pred             CCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC----CCHHHHhhcccHhHHHHHH
Confidence            467999998866 46788999999999999999999998632211 11110010000    00000         00000


Q ss_pred             --cccCCCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           91 --EILLQDSI---SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        91 --~~l~~~~~---~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                        +..+...+   .......+.+++..|++.+|.+||+..+++..
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         256 SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             HhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence              00000000   00123456789999999999999999988763

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.96  E-value=5.9e-10  Score=86.64  Aligned_cols=42  Identities=10%  Similarity=0.026  Sum_probs=36.9

Q ss_pred             CCCCCcchhhHhhh-----cCCcccCccCCCeeehhhhhhCCCCCCC
Q 047377           20 SKRPSMVDIVYALS-----KSDDLLSDISDDALSSSQLISGEKAIDE   61 (160)
Q Consensus        20 ~~~~~y~aPE~~~~-----~~~s~ksDv~s~Gvvl~elltg~~p~~~   61 (160)
                      .+++.|+|||++..     +.++.++||||||++++|+++|+.||..
T Consensus       164 ~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~  210 (331)
T cd05624         164 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA  210 (331)
T ss_pred             cCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence            35689999999875     5678999999999999999999999963

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.96  E-value=5.9e-10  Score=91.49  Aligned_cols=38  Identities=11%  Similarity=-0.056  Sum_probs=34.5

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKA   58 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p   58 (160)
                      +++.|+|||.+.+..++.++|||||||+++||++|..+
T Consensus       330 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~  367 (501)
T PHA03210        330 GTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFC  367 (501)
T ss_pred             CCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            56889999999998999999999999999999998753

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=98.94  E-value=4.6e-10  Score=85.45  Aligned_cols=93  Identities=14%  Similarity=0.072  Sum_probs=67.5

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhcccc-CCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEIL-LQDS   97 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l-~~~~   97 (160)
                      +-++|-|||||++..-.|+.++||||+||+..||..|++||..           ..       +-+...++.... +...
T Consensus       189 VIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsD-----------IH-------PMRAIFMIPT~PPPTF~  250 (502)
T KOG0574|consen  189 VIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSD-----------IH-------PMRAIFMIPTKPPPTFK  250 (502)
T ss_pred             cccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccc-----------cc-------ccceeEeccCCCCCCCC
Confidence            3455899999999999999999999999999999999999961           11       111111221111 0223


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .|..-...+.+.+..|+-++|++|.+..++++
T Consensus       251 KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~  282 (502)
T KOG0574|consen  251 KPEEWSSEFNDFIRSCLIKKPEERKTALRLCE  282 (502)
T ss_pred             ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence            34455567889999999999999999877754

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.93  E-value=1.2e-09  Score=86.78  Aligned_cols=97  Identities=15%  Similarity=-0.013  Sum_probs=71.4

Q ss_pred             cCCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCC
Q 047377           17 KDPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        17 ~~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      ....++|.|+|||.+....|+..+|+||.|++++-|++|.+||..........  ....       ..      ... ..
T Consensus       196 ~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~--~i~~-------~~------~~f-~~  259 (382)
T KOG0032|consen  196 HTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL--AILR-------GD------FDF-TS  259 (382)
T ss_pred             eeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH--HHHc-------CC------CCC-CC
Confidence            45567799999999999999999999999999999999999997443222111  2221       10      111 12


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +..........+++..++..||.+|++..++++
T Consensus       260 ~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  260 EPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ  292 (382)
T ss_pred             CCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence            222334556678889999999999999999988

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=98.93  E-value=2.1e-09  Score=81.70  Aligned_cols=117  Identities=15%  Similarity=0.115  Sum_probs=71.5

Q ss_pred             HhHhhhhc-ccCCCCC----CCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHH-HHHHHHcCCccc
Q 047377            8 MGIAIACL-HKDPSKR----PSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWA-KVEGILEGNEGR   80 (160)
Q Consensus         8 ~~~~~~~~-~~~~~~~----~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~   80 (160)
                      ||+|.... ..+.++.    -=|.|||.+.+ -+|...+|||+.||++.||++|.+-++..+..... .+...+..    
T Consensus       145 FGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~----  220 (396)
T KOG0593|consen  145 FGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGN----  220 (396)
T ss_pred             chhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcc----
Confidence            66666654 2333332    24889999887 58999999999999999999999998854432211 11111110    


Q ss_pred             cccchhhhhcc-------ccC--------CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           81 KVKRVKEWMDE-------ILL--------QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        81 ~~~~~~~~~d~-------~l~--------~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      -..+...++..       +++        ...+| ....-+++++..|++.||.+|++.++++.
T Consensus       221 L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  221 LIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             cCHHHHHHhccCCceeeeecCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccHHHHhc
Confidence            01111111110       110        11122 12235689999999999999999988853

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.92  E-value=6.8e-10  Score=84.25  Aligned_cols=85  Identities=18%  Similarity=0.135  Sum_probs=56.4

Q ss_pred             CCCCcchhhHhhhc--CCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           21 KRPSMVDIVYALSK--SDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        21 ~~~~y~aPE~~~~~--~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      +.+.|++||....+  .++.++||||||++++++++|..|+...... ....+...+              ...   ...
T Consensus       168 ~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~--------------~~~---~~~  230 (290)
T cd05613         168 GTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRI--------------LKS---EPP  230 (290)
T ss_pred             CCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHh--------------hcc---CCC
Confidence            45689999998753  4678999999999999999999998522110 001111111              000   112


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCC
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRP  122 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RP  122 (160)
                      ++......+..++.+||+.+|.+||
T Consensus       231 ~~~~~~~~~~~ll~~~l~~~p~~R~  255 (290)
T cd05613         231 YPQEMSALAKDIIQRLLMKDPKKRL  255 (290)
T ss_pred             CCccCCHHHHHHHHHHhcCCHHHhc
Confidence            2333345668899999999999997

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.92  E-value=7e-10  Score=91.51  Aligned_cols=92  Identities=15%  Similarity=0.091  Sum_probs=64.7

Q ss_pred             CCCCcchhhHh-----hhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           21 KRPSMVDIVYA-----LSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        21 ~~~~y~aPE~~-----~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      ++|-|||||++     ....|+.++|||||||++.||..+.+|...-+   ...+.-.+.           +--.|.|  
T Consensus       192 GTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln---pMRVllKia-----------KSePPTL--  255 (1187)
T KOG0579|consen  192 GTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN---PMRVLLKIA-----------KSEPPTL--  255 (1187)
T ss_pred             CCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc---hHHHHHHHh-----------hcCCCcc--
Confidence            35889999876     45689999999999999999999999865211   111111111           0011222  


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       -.|..-...+.++..+|+.++|..||+..++++
T Consensus       256 -lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  256 -LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             -cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence             334455567788999999999999999988865

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.91  E-value=1.7e-09  Score=84.09  Aligned_cols=41  Identities=10%  Similarity=0.032  Sum_probs=35.9

Q ss_pred             CCCCcchhhHhhh-----cCCcccCccCCCeeehhhhhhCCCCCCC
Q 047377           21 KRPSMVDIVYALS-----KSDDLLSDISDDALSSSQLISGEKAIDE   61 (160)
Q Consensus        21 ~~~~y~aPE~~~~-----~~~s~ksDv~s~Gvvl~elltg~~p~~~   61 (160)
                      +++.|+|||.+..     +.++.++|||||||+++|+++|+.||..
T Consensus       165 gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~  210 (331)
T cd05597         165 GTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA  210 (331)
T ss_pred             ccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence            5678999999863     4578899999999999999999999963

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.91  E-value=1.3e-09  Score=86.78  Aligned_cols=123  Identities=15%  Similarity=0.054  Sum_probs=76.5

Q ss_pred             HhHhhhhcccCCCCCC----CcchhhHhh-hcCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCcccc
Q 047377            8 MGIAIACLHKDPSKRP----SMVDIVYAL-SKSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRK   81 (160)
Q Consensus         8 ~~~~~~~~~~~~~~~~----~y~aPE~~~-~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~   81 (160)
                      ||+|..-..++|++.-    =|.|||.++ ++.|+.+.|+|++||+++|+.+-++-|++.++ ..+-.++..+.+...+.
T Consensus       154 FGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~  233 (538)
T KOG0661|consen  154 FGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDS  233 (538)
T ss_pred             cccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCcccc
Confidence            4455554445555441    378999875 56789999999999999999999999985432 33334555554222000


Q ss_pred             --c-cchhhhhccccC---CCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           82 --V-KRVKEWMDEILL---QDSI---SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        82 --~-~~~~~~~d~~l~---~~~~---~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                        . ..+...+.-+++   +...   -.......+.++.+|+.-||.+||++.+.++.
T Consensus       234 ~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  234 WPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             chhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence              0 011111111110   0000   01355677899999999999999999988763

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=98.89  E-value=5.9e-10  Score=84.31  Aligned_cols=45  Identities=11%  Similarity=0.052  Sum_probs=41.3

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG   63 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~   63 (160)
                      -+++|.|+|||.+....++..+|-|+|||+++||+.|.+||...+
T Consensus       201 lCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~  245 (355)
T KOG0616|consen  201 LCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDN  245 (355)
T ss_pred             ecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCC
Confidence            357899999999999999999999999999999999999997444

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=98.89  E-value=6.2e-10  Score=87.32  Aligned_cols=84  Identities=14%  Similarity=0.073  Sum_probs=62.2

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +..|+|||++.+..-+..+|-|.|||++|||+.|..||-+.+.                 ...+..++-..+ ...-...
T Consensus       298 ThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~-----------------~~Tl~NIv~~~l-~Fp~~~~  359 (459)
T KOG0610|consen  298 THEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNN-----------------KETLRNIVGQPL-KFPEEPE  359 (459)
T ss_pred             ccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCc-----------------hhhHHHHhcCCC-cCCCCCc
Confidence            3579999999999999999999999999999999999974332                 222223332332 1111124


Q ss_pred             HHHHHHHHHHHccccCCCCCCC
Q 047377          102 GVMRAMGIAIACLHKDPSKRPS  123 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs  123 (160)
                      ....+.+|+.+-+.+||.+|-.
T Consensus       360 vs~~akDLIr~LLvKdP~kRlg  381 (459)
T KOG0610|consen  360 VSSAAKDLIRKLLVKDPSKRLG  381 (459)
T ss_pred             chhHHHHHHHHHhccChhhhhc
Confidence            4566789999999999999987

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.89  E-value=2.4e-09  Score=83.59  Aligned_cols=107  Identities=9%  Similarity=0.036  Sum_probs=62.4

Q ss_pred             CCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCcccc--------ccchhhhhc-
Q 047377           21 KRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRK--------VKRVKEWMD-   90 (160)
Q Consensus        21 ~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~d-   90 (160)
                      ..+.|++||.+.. ..++.++|+||+|++++++++|..||........  ............        .......+. 
T Consensus       177 ~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (343)
T cd07880         177 VTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ--LMEIMKVTGTPSKEFVQKLQSEDAKNYVKK  254 (343)
T ss_pred             cCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCCHHHHHhhcchhHHHHHHh
Confidence            4578999999876 3588999999999999999999999863321110  001110000000        000000000 


Q ss_pred             -cccCCCC---CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           91 -EILLQDS---ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        91 -~~l~~~~---~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       +......   ........+.+++.+|++.+|.+||++.+++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         255 LPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             ccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence             0000000   00112335678999999999999999999884

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.85  E-value=1.2e-09  Score=80.47  Aligned_cols=90  Identities=11%  Similarity=0.106  Sum_probs=67.0

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.-|.+||...+...+..+|+|++|++++|++.|.+||.....                 .....++..-++   .+|.
T Consensus       184 gt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~-----------------~etYkrI~k~~~---~~p~  243 (281)
T KOG0580|consen  184 GTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH-----------------SETYKRIRKVDL---KFPS  243 (281)
T ss_pred             cccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh-----------------HHHHHHHHHccc---cCCc
Confidence            34679999999999999999999999999999999999962221                 111111111122   3344


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .......+++.+|+..+|.+|....|++..
T Consensus       244 ~is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  244 TISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             ccChhHHHHHHHHhccCccccccHHHHhhh
Confidence            445667899999999999999999998763

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.80  E-value=3.9e-09  Score=87.88  Aligned_cols=105  Identities=10%  Similarity=-0.081  Sum_probs=57.2

Q ss_pred             CCCCCcchhhHhhhc----------------------CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCC
Q 047377           20 SKRPSMVDIVYALSK----------------------SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGN   77 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~----------------------~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~   77 (160)
                      ...|.|+|||.+...                      .++.++|||||||+++||+++..+.+...   ... ...+...
T Consensus       318 ~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~---~~~-~~~l~~~  393 (566)
T PLN03225        318 LLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNL---IQF-NRQLKRN  393 (566)
T ss_pred             ccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHH---HHH-HHHHHhc
Confidence            345789999965422                      23456799999999999998776654211   111 0111100


Q ss_pred             ccccccchhhhhccccCCCC------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           78 EGRKVKRVKEWMDEILLQDS------ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        78 ~~~~~~~~~~~~d~~l~~~~------~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .. +.......+.+.. ..+      ..........+++.+|++.||.+||++.++++.
T Consensus       394 ~~-~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~H  450 (566)
T PLN03225        394 DY-DLVAWRKLVEPRA-SPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAH  450 (566)
T ss_pred             CC-cHHHHHHhhcccc-chhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCC
Confidence            00 0000001111110 000      000011234579999999999999999998873

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=98.78  E-value=9.1e-09  Score=78.26  Aligned_cols=98  Identities=11%  Similarity=0.058  Sum_probs=68.2

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc-hhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG-KVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ++=+|-|.|||++...+|+..+|+||+||++|-+++|-+||.... ..+..-+...+..+.            -.. +.+
T Consensus       223 Pc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gq------------y~F-P~p  289 (400)
T KOG0604|consen  223 PCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQ------------YEF-PEP  289 (400)
T ss_pred             CcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccC------------ccC-CCh
Confidence            444578999999999999999999999999999999999997322 222222222222100            011 112


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ..........+++...+..+|.+|-++.+++.
T Consensus       290 EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  290 EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             hHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence            22344556678888899999999999999876

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=98.77  E-value=3.1e-09  Score=84.53  Aligned_cols=88  Identities=17%  Similarity=0.120  Sum_probs=59.1

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc-hhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG-KVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      +++||||||++..+.|+...|-||+||++|||+.|+.||-... ..-...+...              +...   ..+++
T Consensus       348 GT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr--------------~~~~---~~ey~  410 (591)
T KOG0986|consen  348 GTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRR--------------TLED---PEEYS  410 (591)
T ss_pred             CcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHH--------------Hhcc---hhhcc
Confidence            4589999999999999999999999999999999999996211 0011111010              1111   12344


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMV  125 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~  125 (160)
                      ..-......+...-+.+||.+|....
T Consensus       411 ~kFS~eakslc~~LL~Kdp~~RLGcr  436 (591)
T KOG0986|consen  411 DKFSEEAKSLCEGLLTKDPEKRLGCR  436 (591)
T ss_pred             cccCHHHHHHHHHHHccCHHHhccCC
Confidence            43344556666777889999887543

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=98.75  E-value=3.3e-09  Score=85.51  Aligned_cols=85  Identities=13%  Similarity=0.092  Sum_probs=63.0

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHH-HHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAK-VEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      +++|.|+|||.+..+..+..+|.|++||+++|+++|.+||...+...... +...++                   --.+
T Consensus       580 cGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid-------------------~i~~  640 (732)
T KOG0614|consen  580 CGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGID-------------------KIEF  640 (732)
T ss_pred             cCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhh-------------------hhhc
Confidence            46799999999999999999999999999999999999998544322221 111121                   1134


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCC
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPS  123 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs  123 (160)
                      |....+...+++.+.+..+|.+|..
T Consensus       641 Pr~I~k~a~~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  641 PRRITKTATDLIKKLCRDNPTERLG  665 (732)
T ss_pred             ccccchhHHHHHHHHHhcCcHhhhc
Confidence            5555566678888888889999875

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.72  E-value=1.7e-08  Score=82.82  Aligned_cols=57  Identities=12%  Similarity=0.104  Sum_probs=44.4

Q ss_pred             HHHhHhhhhcccCCCCC----CCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCC
Q 047377            6 SAMGIAIACLHKDPSKR----PSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEE   62 (160)
Q Consensus         6 ~~~~~~~~~~~~~~~~~----~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~   62 (160)
                      ||-|++-+|.....-=+    --|.|||++.+..|+.+-|+|||||++.||.+|.+-|+..
T Consensus       331 KVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~  391 (586)
T KOG0667|consen  331 KVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD  391 (586)
T ss_pred             eEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence            45566666644332212    2599999999999999999999999999999998888743

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.70  E-value=6.1e-09  Score=83.41  Aligned_cols=119  Identities=17%  Similarity=0.151  Sum_probs=78.4

Q ss_pred             HHHhHhhhhcccCCCCC----CCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc-------hhHHHHHHHH-
Q 047377            6 SAMGIAIACLHKDPSKR----PSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG-------KVLWAKVEGI-   73 (160)
Q Consensus         6 ~~~~~~~~~~~~~~~~~----~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~-------~~~~~~~~~~-   73 (160)
                      |+++++=.|=...+-+.    --|.+||++.+..|+..+|||||+|+++|++||-.-|++..       ..-+..+.+. 
T Consensus       394 KIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELL  473 (590)
T KOG1290|consen  394 KIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELL  473 (590)
T ss_pred             EEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHH
Confidence            34566666654333332    36999999999999999999999999999999998877321       1111222111 


Q ss_pred             -------HcCCccccccchhhhhccc--------cC--------C--CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 047377           74 -------LEGNEGRKVKRVKEWMDEI--------LL--------Q--DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIV  128 (160)
Q Consensus        74 -------~~~~~~~~~~~~~~~~d~~--------l~--------~--~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~  128 (160)
                             ..+     .+.-+++++.+        |.        .  -+++.+.+.++.+...-+++.+|.+||++.+.+
T Consensus       474 G~iPr~ia~~-----Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl  548 (590)
T KOG1290|consen  474 GKIPRKIALG-----GKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCL  548 (590)
T ss_pred             hhccHHHHhc-----CcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHh
Confidence                   111     11112222211        00        0  134567888999999999999999999999887


Q ss_pred             H
Q 047377          129 H  129 (160)
Q Consensus       129 ~  129 (160)
                      +
T Consensus       549 ~  549 (590)
T KOG1290|consen  549 K  549 (590)
T ss_pred             c
Confidence            5

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=98.69  E-value=2e-08  Score=84.69  Aligned_cols=93  Identities=18%  Similarity=0.150  Sum_probs=63.1

Q ss_pred             CCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhC-CCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCC
Q 047377           18 DPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISG-EKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        18 ~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      ..+++-||+|||++....-+..+||||+||+++.+++| ..||....    ..=.+++.++.         .+. .+   
T Consensus       673 ~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~----~R~~NIl~~~~---------~L~-~L---  735 (903)
T KOG1027|consen  673 GGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL----ERQANILTGNY---------TLV-HL---  735 (903)
T ss_pred             CCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchH----HhhhhhhcCcc---------cee-ee---
Confidence            34556799999999998888999999999999999885 89996211    00001221100         000 11   


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +...++  ...+|+.++++.+|..||++.+|+.
T Consensus       736 ~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  736 EPLPDC--EAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             ccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence            111112  5578889999999999999999963

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.68  E-value=1.8e-08  Score=77.81  Aligned_cols=105  Identities=10%  Similarity=0.085  Sum_probs=63.9

Q ss_pred             cchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccc-----cchhhhhccccCCCC
Q 047377           25 MVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKV-----KRVKEWMDEILLQDS   97 (160)
Q Consensus        25 y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~l~~~~   97 (160)
                      |.|||.+... .|+...||||.||++.||++|++-|++.+. .....+...+.+..++.-     ......+........
T Consensus       193 YRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~  272 (359)
T KOG0660|consen  193 YRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPK  272 (359)
T ss_pred             ecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCC
Confidence            8899988654 799999999999999999999999984432 222222233322110000     001112211000011


Q ss_pred             CCH-----HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           98 ISM-----EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        98 ~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .+.     ......+++..+++..||.+|.|..|.++
T Consensus       273 ~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~  309 (359)
T KOG0660|consen  273 QPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA  309 (359)
T ss_pred             CCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence            111     22234578899999999999999988866

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.67  E-value=1.2e-08  Score=80.85  Aligned_cols=103  Identities=9%  Similarity=0.025  Sum_probs=66.1

Q ss_pred             CCcchhhHhhhc----CC--cccCccCCCeeehhhhhhC----------CCCCC--CCchhHHHHHHHHHcCCccccccc
Q 047377           23 PSMVDIVYALSK----SD--DLLSDISDDALSSSQLISG----------EKAID--EEGKVLWAKVEGILEGNEGRKVKR   84 (160)
Q Consensus        23 ~~y~aPE~~~~~----~~--s~ksDv~s~Gvvl~elltg----------~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      -.|||||.+-..    .|  -..+||||||.|+||+.-+          +.||.  .+...-...+.+.+-         
T Consensus       384 KRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVC---------  454 (513)
T KOG2052|consen  384 KRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVC---------  454 (513)
T ss_pred             eeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhccee---------
Confidence            579999987432    12  2569999999999998642          34554  111111222222111         


Q ss_pred             hhhhhccccCCCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           85 VKEWMDEILLQDS-ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        85 ~~~~~d~~l~~~~-~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                       .+-+.|.+ +.. ...+.++.+.++|..||..+|..|-+.-.|-+.|.++.+
T Consensus       455 -v~~~RP~i-pnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  455 -VQKLRPNI-PNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             -ecccCCCC-CcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence             01122333 222 233788899999999999999999999888888888864

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.65  E-value=2.9e-08  Score=80.50  Aligned_cols=106  Identities=11%  Similarity=-0.020  Sum_probs=69.0

Q ss_pred             CCcchhhHhhhc-------CCcccCccCCCeeehhhhhhCCCCCCCCchhH-HHHHHHHHcCCccccccchhhhhccccC
Q 047377           23 PSMVDIVYALSK-------SDDLLSDISDDALSSSQLISGEKAIDEEGKVL-WAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        23 ~~y~aPE~~~~~-------~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      .-|.|||.+...       ..+.+.||||||++++|+++.+.||+...... ...+...+.      . .....+.|.+ 
T Consensus       115 ~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~------~-~~~~~~rP~i-  186 (484)
T KOG1023|consen  115 LLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVK------K-GGSNPFRPSI-  186 (484)
T ss_pred             HhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHH------h-cCCCCcCcch-
Confidence            468999988653       14678999999999999999999998321111 011111121      0 0111122222 


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccCC
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSV  138 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~~  138 (160)
                      ...  .+....+..++..||..+|..||++.+|-..++.+....
T Consensus       187 ~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~  228 (484)
T KOG1023|consen  187 ELL--NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG  228 (484)
T ss_pred             hhh--hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence            100  022336788999999999999999999999998886543

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.64  E-value=2.3e-08  Score=79.95  Aligned_cols=95  Identities=15%  Similarity=0.105  Sum_probs=66.9

Q ss_pred             CCCCCCcchhhHhhhcC----CcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccC
Q 047377           19 PSKRPSMVDIVYALSKS----DDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~----~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      ..++|.|+|||....+.    .+.+-||||+||+||.++.|+.||-.+..  .    ..           ..+++...| 
T Consensus       275 tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~--~----~l-----------~~KIvn~pL-  336 (576)
T KOG0585|consen  275 TVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE--L----EL-----------FDKIVNDPL-  336 (576)
T ss_pred             cCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH--H----HH-----------HHHHhcCcc-
Confidence            45679999999987743    35789999999999999999999963211  1    11           123444444 


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAV  131 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L  131 (160)
                      ..+...+....+.+|+.+.+.+||.+|-+..+|....
T Consensus       337 ~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp  373 (576)
T KOG0585|consen  337 EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP  373 (576)
T ss_pred             cCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence            1121223455678899999999999999988876543

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=98.61  E-value=3.6e-08  Score=76.28  Aligned_cols=102  Identities=13%  Similarity=0.068  Sum_probs=67.8

Q ss_pred             CcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCc-hhHHHHHHHHHcCCccccccchhhhhc--------ccc
Q 047377           24 SMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEG-KVLWAKVEGILEGNEGRKVKRVKEWMD--------EIL   93 (160)
Q Consensus        24 ~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d--------~~l   93 (160)
                      -|.|||.+.+. .|+.+.||||.|||+.||+-|++-|++.+ ......+...+...+   .+. ...+.        +.+
T Consensus       190 yYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt---~e~-I~~mn~~y~~~~~p~i  265 (364)
T KOG0658|consen  190 YYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPT---RED-IKSMNPNYTEFKFPQI  265 (364)
T ss_pred             cccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCC---HHH-HhhcCcccccccCccc
Confidence            38999998765 69999999999999999999999998543 333444455554322   111 11111        111


Q ss_pred             CCCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           94 LQDS----ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        94 ~~~~----~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ....    ..........+++.+++..+|.+|.+..+++.
T Consensus       266 k~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  266 KAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             ccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence            0011    12234456789999999999999999877754

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.59  E-value=1.2e-08  Score=78.46  Aligned_cols=87  Identities=16%  Similarity=0.110  Sum_probs=60.2

Q ss_pred             ccCCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc-hhHHHHHHHHHcCCccccccchhhhhccccC
Q 047377           16 HKDPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG-KVLWAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        16 ~~~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      .+.-+++|.|+|||++-...|...+|-|..|||++||++|+-||.... .-++..    +              +-..+ 
T Consensus       325 ~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeL----I--------------l~ed~-  385 (516)
T KOG0690|consen  325 TKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFEL----I--------------LMEDL-  385 (516)
T ss_pred             eccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHH----H--------------Hhhhc-
Confidence            345567899999999999999999999999999999999999997221 111111    1              00111 


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCC
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKRPS  123 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs  123 (160)
                        .+|.....+...|....+.+||++|..
T Consensus       386 --kFPr~ls~eAktLLsGLL~kdP~kRLG  412 (516)
T KOG0690|consen  386 --KFPRTLSPEAKTLLSGLLKKDPKKRLG  412 (516)
T ss_pred             --cCCccCCHHHHHHHHHHhhcChHhhcC
Confidence              233333334456667778899999953

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.59  E-value=1.7e-08  Score=78.02  Aligned_cols=43  Identities=9%  Similarity=0.064  Sum_probs=40.2

Q ss_pred             CCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCC
Q 047377           18 DPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAID   60 (160)
Q Consensus        18 ~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~   60 (160)
                      .-+++|.|+|||.+++..|...+|-|++||+++||+.|+.||+
T Consensus       410 tfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfd  452 (593)
T KOG0695|consen  410 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD  452 (593)
T ss_pred             cccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcc
Confidence            3456799999999999999999999999999999999999998

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.54  E-value=2.4e-08  Score=87.09  Aligned_cols=87  Identities=13%  Similarity=0.081  Sum_probs=55.1

Q ss_pred             CCcchhhHhhhc---CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC--
Q 047377           23 PSMVDIVYALSK---SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS--   97 (160)
Q Consensus        23 ~~y~aPE~~~~~---~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~--   97 (160)
                      --|+|||.+...   .|+.|+|+||+||+++||+..   |... . --..+...++              ++.+ +.+  
T Consensus       779 alYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP---F~Ts-M-ERa~iL~~LR--------------~g~i-P~~~~  838 (1351)
T KOG1035|consen  779 ALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP---FGTS-M-ERASILTNLR--------------KGSI-PEPAD  838 (1351)
T ss_pred             eeeecHHHhcccccccccchhhhHHHHHHHHHHhcc---CCch-H-HHHHHHHhcc--------------cCCC-CCCcc
Confidence            469999998654   499999999999999999853   4311 0 0001112222              1222 111  


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +..+....-..++.+.++.||.+||++.|++.
T Consensus       839 f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  839 FFDPEHPEEASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             cccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence            11222233367888899999999999998864

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=98.54  E-value=5e-08  Score=73.03  Aligned_cols=124  Identities=9%  Similarity=0.034  Sum_probs=77.1

Q ss_pred             HHHhHhhhhcccCCCCCC-------CcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcC
Q 047377            6 SAMGIAIACLHKDPSKRP-------SMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEG   76 (160)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~-------~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~   76 (160)
                      |+.+++..+....+...-       =|.|||.+.+. +|+.-+|+||.||++.|++-|.+-+++++. .....+...+.+
T Consensus       141 KiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGT  220 (318)
T KOG0659|consen  141 KIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGT  220 (318)
T ss_pred             EeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCC
Confidence            556666666666555443       38999988754 689999999999999999999888874432 222333444432


Q ss_pred             Cccccccc---hhhhhc----cccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           77 NEGRKVKR---VKEWMD----EILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        77 ~~~~~~~~---~~~~~d----~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .+++.=..   +.+.++    |.......-..+.....+++...+..+|.+|.+++|.++
T Consensus       221 P~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~  280 (318)
T KOG0659|consen  221 PTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK  280 (318)
T ss_pred             CCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence            22111001   111111    111011111233445689999999999999999998876

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=98.42  E-value=1.6e-07  Score=75.11  Aligned_cols=114  Identities=10%  Similarity=-0.030  Sum_probs=66.1

Q ss_pred             CCCcchhhHhhhc-CCc-----ccCccCCCeeehhhhhhCCCCCCC--Cc--hhHHHHHHHHHcCCccccccchhhhhcc
Q 047377           22 RPSMVDIVYALSK-SDD-----LLSDISDDALSSSQLISGEKAIDE--EG--KVLWAKVEGILEGNEGRKVKRVKEWMDE   91 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s-----~ksDv~s~Gvvl~elltg~~p~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~   91 (160)
                      +-.|||||.+-+. .+.     .+.||||+|.|+||++++......  ..  +.-++.   -+. +...-+.-..-++..
T Consensus       381 T~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~---evG-~hPt~e~mq~~VV~k  456 (534)
T KOG3653|consen  381 TRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEA---EVG-NHPTLEEMQELVVRK  456 (534)
T ss_pred             hhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhH---Hhc-CCCCHHHHHHHHHhh
Confidence            3579999988543 122     458999999999999986554320  00  000000   000 000000000111222


Q ss_pred             ccCCCCCCH-----HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccCCCC
Q 047377           92 ILLQDSISM-----EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSVSD  140 (160)
Q Consensus        92 ~l~~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~~~~  140 (160)
                      +. ++.++.     ..+..+.+.+..||+.|+..|-|..=+.+++..+.....+
T Consensus       457 K~-RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~  509 (534)
T KOG3653|consen  457 KQ-RPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED  509 (534)
T ss_pred             cc-CCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence            22 333333     3456678888999999999999998888888887665444

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=98.33  E-value=8.6e-07  Score=68.33  Aligned_cols=107  Identities=12%  Similarity=-0.026  Sum_probs=66.4

Q ss_pred             CcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhhccccCCCCCC--
Q 047377           24 SMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS--   99 (160)
Q Consensus        24 ~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~--   99 (160)
                      -|.|||.+.+. .|+...||||+||++.||+++++-|+.... .....+...+.+.++..=..+....+-...-....  
T Consensus       185 WYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~  264 (323)
T KOG0594|consen  185 WYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGP  264 (323)
T ss_pred             eccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCc
Confidence            49999999876 799999999999999999999999985443 22233334443211000000111111110000110  


Q ss_pred             ----HHHH---HHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          100 ----MEGV---MRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       100 ----~~~~---~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                          ....   ....+++..|++.+|.+|.|....+.+
T Consensus       265 ~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  265 KDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             cchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence                1111   256889999999999999999888775

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.32  E-value=4.2e-07  Score=74.46  Aligned_cols=93  Identities=17%  Similarity=0.077  Sum_probs=67.2

Q ss_pred             cCCCCCCCcchhhHhhhcCCc-ccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           17 KDPSKRPSMVDIVYALSKSDD-LLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        17 ~~~~~~~~y~aPE~~~~~~~s-~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      ...++.|-|.|||.+.+..++ ..+|+||+|++++-++.|.-||+....       ..+          ...++...+  
T Consensus       212 qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l-------k~L----------r~rvl~gk~--  272 (596)
T KOG0586|consen  212 QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL-------KEL----------RPRVLRGKY--  272 (596)
T ss_pred             cccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc-------ccc----------cchheeeee--
Confidence            455677899999999887765 789999999999999999999974321       000          112222222  


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       .+|.-....+..++++.+..+|.+|+++.+|..
T Consensus       273 -rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  273 -RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             -cccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence             233334456678888999999999999998865

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=98.30  E-value=4.7e-07  Score=76.97  Aligned_cols=90  Identities=13%  Similarity=0.127  Sum_probs=63.0

Q ss_pred             CCCcchhhHhhh-----cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhc-cccCC
Q 047377           22 RPSMVDIVYALS-----KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMD-EILLQ   95 (160)
Q Consensus        22 ~~~y~aPE~~~~-----~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~l~~   95 (160)
                      +|-|||||++..     ..|+.++|+||+||+..||-.|.+|+..--  -   ++.++            .+.. |.. .
T Consensus       186 tP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmH--P---mraLF------------~IpRNPPP-k  247 (953)
T KOG0587|consen  186 TPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMH--P---MRALF------------LIPRNPPP-K  247 (953)
T ss_pred             CcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcc--h---hhhhc------------cCCCCCCc-c
Confidence            388999999864     356789999999999999999999986110  0   01111            0000 111 1


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ..-|..=.+++.+.+..|+.+|-.+||++.++++
T Consensus       248 Lkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  248 LKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             ccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence            1234455678889999999999999999988764

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=98.30  E-value=1.7e-07  Score=68.17  Aligned_cols=37  Identities=8%  Similarity=-0.049  Sum_probs=32.8

Q ss_pred             CcchhhHhh----hcCCcccCccCCCeeehhhhhhCCCCCC
Q 047377           24 SMVDIVYAL----SKSDDLLSDISDDALSSSQLISGEKAID   60 (160)
Q Consensus        24 ~y~aPE~~~----~~~~s~ksDv~s~Gvvl~elltg~~p~~   60 (160)
                      -|||||.+.    ...|+.||||||+|+.+.|+.+++.||+
T Consensus       213 pYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~  253 (282)
T KOG0984|consen  213 PYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYE  253 (282)
T ss_pred             ccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence            499999874    3378999999999999999999999996

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=98.28  E-value=3.3e-07  Score=74.02  Aligned_cols=81  Identities=14%  Similarity=0.032  Sum_probs=52.5

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +..||+||++.+..|+.|+|||++|++++|++. -..++..     ... ..-++      .+    .++|.. ..++|.
T Consensus       425 t~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er-----~~t-~~d~r------~g----~ip~~~-~~d~p~  487 (516)
T KOG1033|consen  425 TLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER-----IAT-LTDIR------DG----IIPPEF-LQDYPE  487 (516)
T ss_pred             ccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH-----HHh-hhhhh------cC----CCChHH-hhcCcH
Confidence            467999999999999999999999999999986 3444320     000 01111      11    111111 223332


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSM  124 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~  124 (160)
                      +     ..+.+..+.+.|.+||++
T Consensus       488 e-----~~ll~~lls~~p~~RP~~  506 (516)
T KOG1033|consen  488 E-----YTLLQQLLSPSPEERPSA  506 (516)
T ss_pred             H-----HHHHHHhcCCCcccCchH
Confidence            2     467788999999999944

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=98.27  E-value=3.6e-07  Score=72.38  Aligned_cols=89  Identities=17%  Similarity=0.141  Sum_probs=63.2

Q ss_pred             CCCCCcchhhHhhhcCCc-ccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDD-LLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s-~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ++.|.|.+||.+.+..|. ..+|.||+||++|-++.|..||++.+...  .+.++..|.          ..     .++.
T Consensus       213 CGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~--lvrQIs~Ga----------Yr-----EP~~  275 (668)
T KOG0611|consen  213 CGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR--LVRQISRGA----------YR-----EPET  275 (668)
T ss_pred             cCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH--HHHHhhccc----------cc-----CCCC
Confidence            466899999999888876 67999999999999999999998543211  122333210          11     1122


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      |.    ....|+.+++..+|.+|.++.+|..
T Consensus       276 PS----dA~gLIRwmLmVNP~RRATieDiAs  302 (668)
T KOG0611|consen  276 PS----DASGLIRWMLMVNPERRATIEDIAS  302 (668)
T ss_pred             Cc----hHHHHHHHHHhcCcccchhHHHHhh
Confidence            22    2356778899999999999999865

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=98.23  E-value=1.2e-06  Score=67.73  Aligned_cols=102  Identities=12%  Similarity=0.011  Sum_probs=64.4

Q ss_pred             CcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhh-------------
Q 047377           24 SMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEW-------------   88 (160)
Q Consensus        24 ~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------------   88 (160)
                      =|.|||.+.+. .|+...|+||+||++.|++++++-|++.+. .....+...+...+   +.....+             
T Consensus       242 WYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPt---e~iwpg~~~lp~~k~~~f~~  318 (419)
T KOG0663|consen  242 WYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPS---EAIWPGYSELPAVKKMTFSE  318 (419)
T ss_pred             eecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCc---cccCCCccccchhhccccCC
Confidence            49999998875 589999999999999999999999885442 22233333332211   0000000             


Q ss_pred             -hccccCCCCCCHH-HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           89 -MDEILLQDSISME-GVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        89 -~d~~l~~~~~~~~-~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       ....+ ...++.. ....-.+++...+..||++|-|++|-++
T Consensus       319 ~pyn~l-r~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  319 HPYNNL-RKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             CCchhh-hhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence             00111 1112211 2244567888899999999999988765

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.20  E-value=2.3e-06  Score=69.14  Aligned_cols=103  Identities=14%  Similarity=0.073  Sum_probs=62.6

Q ss_pred             CcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHH-HHHHHcCCcccc--ccchh--hhhccccCCCC
Q 047377           24 SMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAK-VEGILEGNEGRK--VKRVK--EWMDEILLQDS   97 (160)
Q Consensus        24 ~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~--~~~d~~l~~~~   97 (160)
                      =|.|||.+++. .|+...|+||.||++.||+.|++.+.......-.+ +..+....+++-  ...+.  ..+.+   ...
T Consensus       284 WYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp---~~~  360 (560)
T KOG0600|consen  284 WYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKP---QQP  360 (560)
T ss_pred             eccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCC---CCc
Confidence            49999999876 69999999999999999999999987544322222 222221100000  00000  00111   112


Q ss_pred             CCH-------HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           98 ISM-------EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        98 ~~~-------~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      |..       ........|+...|..||.+|.++.+++.
T Consensus       361 y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  361 YKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             ccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence            211       11234577888899999999999987664

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.20  E-value=1.4e-06  Score=76.07  Aligned_cols=96  Identities=16%  Similarity=0.129  Sum_probs=62.9

Q ss_pred             CCCCCCcchhhHhhhcC-----------CcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCcccccc-ch
Q 047377           19 PSKRPSMVDIVYALSKS-----------DDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVK-RV   85 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~-----------~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~   85 (160)
                      ..+|-+|+|||.+..+.           .+.+=||||.||++.|+++ |+++|...     +. ..+..+ ...+.+ .+
T Consensus       187 SrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-----QL-~aYr~~-~~~~~e~~L  259 (1431)
T KOG1240|consen  187 SRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-----QL-LAYRSG-NADDPEQLL  259 (1431)
T ss_pred             CCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-----HH-HhHhcc-CccCHHHHH
Confidence            34568999999886532           5677899999999999976 89998621     11 111111 000111 11


Q ss_pred             hhhhccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377           86 KEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus        86 ~~~~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      +++-|+.             +..++..+++.||.+|-++.+.++.-..+
T Consensus       260 e~Ied~~-------------~Rnlil~Mi~rdPs~RlSAedyL~~yrG~  295 (1431)
T KOG1240|consen  260 EKIEDVS-------------LRNLILSMIQRDPSKRLSAEDYLQKYRGL  295 (1431)
T ss_pred             HhCcCcc-------------HHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence            2222233             37788899999999999999998874433

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=98.16  E-value=3.5e-06  Score=68.66  Aligned_cols=38  Identities=13%  Similarity=-0.045  Sum_probs=35.8

Q ss_pred             CcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCC
Q 047377           24 SMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDE   61 (160)
Q Consensus        24 ~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~   61 (160)
                      -|.|||.+++-.|+..-|+||.||+|||+-||+.-|++
T Consensus       600 FYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG  637 (752)
T KOG0670|consen  600 FYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPG  637 (752)
T ss_pred             hccCcceeecCcccCCccceeeceeeEEeeccceecCC
Confidence            59999999999999999999999999999999998873

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.11  E-value=2.3e-06  Score=70.43  Aligned_cols=101  Identities=11%  Similarity=0.022  Sum_probs=53.1

Q ss_pred             CCCcchhhHhhhcCC----------------------cccCccCCCeeehhhhhhCCC-CCCCCchhHHHHHHHHHcCCc
Q 047377           22 RPSMVDIVYALSKSD----------------------DLLSDISDDALSSSQLISGEK-AIDEEGKVLWAKVEGILEGNE   78 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~----------------------s~ksDv~s~Gvvl~elltg~~-p~~~~~~~~~~~~~~~~~~~~   78 (160)
                      .|.|++||.+.....                      ..+.|+||+||++++|+++.. |+..... ..... .....  
T Consensus       373 tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~-f~~~~-~~~~~--  448 (507)
T PLN03224        373 DPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRL-FNTEL-RQYDN--  448 (507)
T ss_pred             CcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhh-hhhHH-hhccc--
Confidence            578999998754321                      134799999999999999864 5531100 00000 00000  


Q ss_pred             cccccchhhhhccccCCCCCCHHHHHHHHHHHHHccccCC---CCCCCHHHHHH
Q 047377           79 GRKVKRVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDP---SKRPSMVDIVH  129 (160)
Q Consensus        79 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p---~~RPs~~ev~~  129 (160)
                        +............ .............+++.+++..+|   .+|+|+.|++.
T Consensus       449 --~~~~~r~~~~~~~-~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~  499 (507)
T PLN03224        449 --DLNRWRMYKGQKY-DFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS  499 (507)
T ss_pred             --hHHHHHhhcccCC-CcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence              0000000000011 001111223445777888888765   78999998875

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.09  E-value=1.7e-06  Score=61.22  Aligned_cols=59  Identities=27%  Similarity=0.263  Sum_probs=49.7

Q ss_pred             CCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ....|++||..... ..+.++|+|++|++++++       .                                       
T Consensus       155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------~---------------------------------------  188 (215)
T cd00180         155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------P---------------------------------------  188 (215)
T ss_pred             CCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------H---------------------------------------
Confidence            45789999998877 788999999999999988       0                                       


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                           .+.+++..|+..+|.+||++.+++..
T Consensus       189 -----~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         189 -----ELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             -----HHHHHHHHHhhCCcccCcCHHHHhhC
Confidence                 12567788999999999999998864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=97.99  E-value=3.5e-06  Score=73.66  Aligned_cols=43  Identities=12%  Similarity=0.013  Sum_probs=37.9

Q ss_pred             CCCCCCcchhhHhhh-----cCCcccCccCCCeeehhhhhhCCCCCCC
Q 047377           19 PSKRPSMVDIVYALS-----KSDDLLSDISDDALSSSQLISGEKAIDE   61 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~-----~~~s~ksDv~s~Gvvl~elltg~~p~~~   61 (160)
                      +-++|-|++||++..     +.|+..+|-||+||++|||+.|..||..
T Consensus       236 aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa  283 (1317)
T KOG0612|consen  236 AVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA  283 (1317)
T ss_pred             ccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence            446799999999863     5788999999999999999999999973

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.97  E-value=5.4e-06  Score=69.06  Aligned_cols=48  Identities=10%  Similarity=0.045  Sum_probs=42.4

Q ss_pred             hhcccCCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCC
Q 047377           13 ACLHKDPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAID   60 (160)
Q Consensus        13 ~~~~~~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~   60 (160)
                      -|++-.--+++.|+|||++....++..+|-||.||+|+||+.|+.||.
T Consensus       825 r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~  872 (1034)
T KOG0608|consen  825 RILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFL  872 (1034)
T ss_pred             hhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCcc
Confidence            344444556799999999999999999999999999999999999996

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=97.96  E-value=3.9e-06  Score=67.36  Aligned_cols=95  Identities=11%  Similarity=0.016  Sum_probs=58.3

Q ss_pred             CCCCCcchhhHhhhc----CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           20 SKRPSMVDIVYALSK----SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~----~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      .++-=|++||.+.-+    +++.|+||||.||+++..+.|+.||..+..   ..  +++.      ...+...-+-..  
T Consensus       641 AGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs---QQ--dILq------eNTIlkAtEVqF--  707 (775)
T KOG1151|consen  641 AGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS---QQ--DILQ------ENTILKATEVQF--  707 (775)
T ss_pred             CceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh---HH--HHHh------hhchhcceeccC--
Confidence            344569999998765    578999999999999999999999973211   11  1221      111111111111  


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIV  128 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~  128 (160)
                       +.-..........+.+|++..-.+|-...++.
T Consensus       708 -P~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  708 -PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             -CCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence             00011123346778899999988887765553

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.92  E-value=3.6e-06  Score=70.66  Aligned_cols=104  Identities=13%  Similarity=-0.020  Sum_probs=66.5

Q ss_pred             cccCCCCCCCcchhhHhhhcCCccc-CccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhcccc
Q 047377           15 LHKDPSKRPSMVDIVYALSKSDDLL-SDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEIL   93 (160)
Q Consensus        15 ~~~~~~~~~~y~aPE~~~~~~~s~k-sDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l   93 (160)
                      ...+..+...|+|||......|+.. .||||.||++..|++|+.|+-......... .....      ... .... .. 
T Consensus       480 ~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-~~~~~------~~~-~~~~-~~-  549 (601)
T KOG0590|consen  480 ESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-KTNNY------SDQ-RNIF-EG-  549 (601)
T ss_pred             hhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-hhhcc------ccc-cccc-cC-
Confidence            3444555677999999999999865 999999999999999999875211100000 00000      000 0000 00 


Q ss_pred             CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           94 LQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        94 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       ........+.....++.+.++.+|.+|-++.+|++
T Consensus       550 -~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  550 -PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             -hHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence             00112244566788999999999999999999875

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=97.89  E-value=9.1e-06  Score=67.96  Aligned_cols=45  Identities=11%  Similarity=-0.045  Sum_probs=39.1

Q ss_pred             CCCCCCcchhhHhh-hcCCcccCccCCCeeehhhhhhCCCCCCCCc
Q 047377           19 PSKRPSMVDIVYAL-SKSDDLLSDISDDALSSSQLISGEKAIDEEG   63 (160)
Q Consensus        19 ~~~~~~y~aPE~~~-~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~   63 (160)
                      ..+++.|.+||... .+.|+..+|.|||||++||.+||..||-+..
T Consensus       183 ~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~  228 (732)
T KOG4250|consen  183 LVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG  228 (732)
T ss_pred             ecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence            34567899999888 4889999999999999999999999997443

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=97.87  E-value=1.1e-05  Score=62.36  Aligned_cols=98  Identities=12%  Similarity=0.063  Sum_probs=59.7

Q ss_pred             CCcchhhHhh-----hcCCcccCccCCCeeehhhhhhCCCCCCCCch--hHHHH--HHHHHcCCccccccchhhhhcccc
Q 047377           23 PSMVDIVYAL-----SKSDDLLSDISDDALSSSQLISGEKAIDEEGK--VLWAK--VEGILEGNEGRKVKRVKEWMDEIL   93 (160)
Q Consensus        23 ~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~d~~l   93 (160)
                      ..|||||+.-     ...|+.++|.||+||++|-|++|-+||...-.  ..|..  +....+      ..-++.+-+...
T Consensus       250 AEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ------~~LFesIQEGkY  323 (463)
T KOG0607|consen  250 AEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQ------NKLFESIQEGKY  323 (463)
T ss_pred             hhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHH------HHHHHHHhccCC
Confidence            3599999863     23578999999999999999999999973211  11100  000000      000111112222


Q ss_pred             CCCCCCH----HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           94 LQDSISM----EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        94 ~~~~~~~----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                         ++|.    .......+++..-+.+++.+|.+..+++.
T Consensus       324 ---eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  324 ---EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             ---cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence               3333    23344567777788899999999888876

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.85  E-value=4.2e-05  Score=57.53  Aligned_cols=106  Identities=10%  Similarity=0.028  Sum_probs=59.9

Q ss_pred             CcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHH-HHHHHcCCc-----cccccchhhhhc-cccCC
Q 047377           24 SMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAK-VEGILEGNE-----GRKVKRVKEWMD-EILLQ   95 (160)
Q Consensus        24 ~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~d-~~l~~   95 (160)
                      -|.+||.+.+. .++.+-|||.-||++.||.++.+-+..+......+ +......-+     .-+.-.+.+.+. +.++.
T Consensus       193 wYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~  272 (376)
T KOG0669|consen  193 WYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPK  272 (376)
T ss_pred             ecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCc
Confidence            38899998765 68999999999999999999988876433211111 111111000     000001111110 00101


Q ss_pred             CCCC--HHHHH------HHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSIS--MEGVM------RAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~--~~~~~------~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +.+.  .+..+      ...+++...+..||.+|+...+++.
T Consensus       273 ~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln  314 (376)
T KOG0669|consen  273 GQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN  314 (376)
T ss_pred             chhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence            1111  01122      4567888899999999999887754

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=97.82  E-value=1.3e-05  Score=61.73  Aligned_cols=37  Identities=16%  Similarity=-0.050  Sum_probs=34.1

Q ss_pred             CcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCC
Q 047377           24 SMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAID   60 (160)
Q Consensus        24 ~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~   60 (160)
                      -|.|||.+.+-.+...+||||.||++.||++|.--|.
T Consensus       182 yyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~  218 (369)
T KOG0665|consen  182 YYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP  218 (369)
T ss_pred             eccCchheeccCCcccchhhhhhhHHHHHhhceEEec
Confidence            4899999999899999999999999999999987776

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=97.70  E-value=8.7e-06  Score=58.78  Aligned_cols=40  Identities=15%  Similarity=0.024  Sum_probs=35.1

Q ss_pred             CCCCcchhhHh-hhcCCcccCccCCCeeehhhhhhCCCCCC
Q 047377           21 KRPSMVDIVYA-LSKSDDLLSDISDDALSSSQLISGEKAID   60 (160)
Q Consensus        21 ~~~~y~aPE~~-~~~~~s~ksDv~s~Gvvl~elltg~~p~~   60 (160)
                      ....|++||.. ....++.++|+|+||++++|+++|+.||+
T Consensus       161 ~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~  201 (225)
T smart00221      161 GTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS  201 (225)
T ss_pred             ccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence            34579999998 56677889999999999999999999996

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=97.66  E-value=2.4e-05  Score=64.13  Aligned_cols=91  Identities=14%  Similarity=0.036  Sum_probs=61.0

Q ss_pred             CCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           18 DPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        18 ~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      .+-++|.|+|||+++.+.|+..-|+||.||++|--++|..||.++....     +.++      .   ..++.|.    .
T Consensus       725 sVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn-----dQIQ------N---AaFMyPp----~  786 (888)
T KOG4236|consen  725 SVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN-----DQIQ------N---AAFMYPP----N  786 (888)
T ss_pred             hhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchh-----HHhh------c---cccccCC----C
Confidence            3456799999999999999999999999999999999999997433211     1121      0   1122221    2


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVD  126 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~e  126 (160)
                      ...+.....++++..-++..-.+|=+...
T Consensus       787 PW~eis~~AidlIn~LLqVkm~kRysvdk  815 (888)
T KOG4236|consen  787 PWSEISPEAIDLINNLLQVKMRKRYSVDK  815 (888)
T ss_pred             chhhcCHHHHHHHHHHHHHHHHHhcchHh
Confidence            22333344567777777777777766443

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.41  E-value=0.00034  Score=58.76  Aligned_cols=93  Identities=14%  Similarity=0.052  Sum_probs=58.4

Q ss_pred             CCCCCcchhhHh---hhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhc-cccCC
Q 047377           20 SKRPSMVDIVYA---LSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMD-EILLQ   95 (160)
Q Consensus        20 ~~~~~y~aPE~~---~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~l~~   95 (160)
                      -++|-|||||+.   +.+.|++++|||+.|+...|+-.-++|.-  ...- ..+.....      .    .-.+ |.+  
T Consensus       173 iGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplf--dlhp-mr~l~LmT------k----S~~qpp~l--  237 (829)
T KOG0576|consen  173 IGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLF--DLHP-MRALFLMT------K----SGFQPPTL--  237 (829)
T ss_pred             cCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccc--ccch-HHHHHHhh------c----cCCCCCcc--
Confidence            345889999986   45789999999999999999987777742  1101 11111111      0    1111 122  


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIV  128 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~  128 (160)
                       +-+..-...+.+++..|+.++|++||+.+.++
T Consensus       238 -kDk~kws~~fh~fvK~altknpKkRptaeklL  269 (829)
T KOG0576|consen  238 -KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLL  269 (829)
T ss_pred             -cCCccchHHHHHHHHHHhcCCCccCCChhhhe
Confidence             22222234567788889999999999976553

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=97.30  E-value=0.00014  Score=57.54  Aligned_cols=41  Identities=12%  Similarity=0.028  Sum_probs=35.4

Q ss_pred             CCCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCC
Q 047377           20 SKRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAID   60 (160)
Q Consensus        20 ~~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~   60 (160)
                      .++|||.|||++.. +.-+.+.||||-||+++.+++++.||-
T Consensus       238 AGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf  279 (418)
T KOG1167|consen  238 AGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFF  279 (418)
T ss_pred             CCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccc
Confidence            34589999999854 456789999999999999999999986

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=97.28  E-value=7.3e-05  Score=65.37  Aligned_cols=47  Identities=11%  Similarity=-0.007  Sum_probs=43.5

Q ss_pred             cccCCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCC
Q 047377           15 LHKDPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDE   61 (160)
Q Consensus        15 ~~~~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~   61 (160)
                      ..+.++.+|-|+|||++....|...+|-|++|++++|.+-|..||..
T Consensus       214 ~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffG  260 (1205)
T KOG0606|consen  214 QDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG  260 (1205)
T ss_pred             hhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccC
Confidence            45778899999999999999999999999999999999999999874

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=97.23  E-value=0.00024  Score=56.65  Aligned_cols=86  Identities=16%  Similarity=0.112  Sum_probs=56.0

Q ss_pred             CCcchhhHhhhc--C---C-cccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCC
Q 047377           23 PSMVDIVYALSK--S---D-DLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        23 ~~y~aPE~~~~~--~---~-s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      ..-||||.....  .   + ..|+|.|+.|-+.||+++...||...++.....  ..++           +   ..|  +
T Consensus       415 a~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~--r~Yq-----------e---~qL--P  476 (598)
T KOG4158|consen  415 AKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT--RTYQ-----------E---SQL--P  476 (598)
T ss_pred             ceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheech--hhhh-----------h---hhC--C
Confidence            457999987532  1   1 368999999999999999999998544322221  1111           1   111  2


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHH
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPSMVD  126 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~e  126 (160)
                      ..|..++..+.+++..-+++||.+|++..-
T Consensus       477 alp~~vpp~~rqlV~~lL~r~pskRvsp~i  506 (598)
T KOG4158|consen  477 ALPSRVPPVARQLVFDLLKRDPSKRVSPNI  506 (598)
T ss_pred             CCcccCChHHHHHHHHHhcCCccccCCccH
Confidence            233334445577888899999999998543

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=97.23  E-value=0.00036  Score=53.99  Aligned_cols=37  Identities=11%  Similarity=-0.095  Sum_probs=32.1

Q ss_pred             CcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCC
Q 047377           24 SMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAID   60 (160)
Q Consensus        24 ~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~   60 (160)
                      =|.|||.+.+. .|+...|||+.||+..|+++-.+-|.
T Consensus       204 WYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~  241 (438)
T KOG0666|consen  204 WYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFK  241 (438)
T ss_pred             EecChHHhcccccccchhhhHHHHHHHHHHHccCcccc
Confidence            39999999875 58999999999999999999776654

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=97.21  E-value=0.00027  Score=58.61  Aligned_cols=40  Identities=8%  Similarity=-0.096  Sum_probs=35.5

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDE   61 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~   61 (160)
                      +++.-|||||.+.  .....+|.||||++.+|+++|..||..
T Consensus       154 cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~  193 (612)
T KOG0603|consen  154 CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG  193 (612)
T ss_pred             ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence            6778899999987  556789999999999999999999963

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.01  E-value=0.00068  Score=51.72  Aligned_cols=37  Identities=8%  Similarity=-0.095  Sum_probs=31.8

Q ss_pred             CcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCC
Q 047377           24 SMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAID   60 (160)
Q Consensus        24 ~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~   60 (160)
                      -|.|||.+.+. .|+...||||.||++.|++.++.-|.
T Consensus       222 YYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQ  259 (449)
T KOG0664|consen  222 YYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQ  259 (449)
T ss_pred             HhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhh
Confidence            38999998764 69999999999999999998776665

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=96.82  E-value=0.00036  Score=53.59  Aligned_cols=75  Identities=9%  Similarity=-0.012  Sum_probs=48.8

Q ss_pred             CCcchhhHhhhc--------CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccC
Q 047377           23 PSMVDIVYALSK--------SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        23 ~~y~aPE~~~~~--------~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      ..|.+||.....        .++.+.|.|++|+++|.+-++.-|+.....                  ....+   ..  
T Consensus       206 ~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~------------------~~~~~---~~--  262 (288)
T PF14531_consen  206 VAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSP------------------EADPE---WD--  262 (288)
T ss_dssp             TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGG------------------GSTSG---GG--
T ss_pred             cccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCc------------------ccccc---cc--
Confidence            578999977553        478899999999999999999999972210                  00000   01  


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCC
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKR  121 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~R  121 (160)
                      -..|. +.+..+..|+...++.+|.+|
T Consensus       263 f~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  263 FSRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             GTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             chhcC-CcCHHHHHHHHHHccCCcccC
Confidence            23455 667788899999999999887

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=96.77  E-value=0.0042  Score=47.41  Aligned_cols=37  Identities=8%  Similarity=-0.077  Sum_probs=29.6

Q ss_pred             CcchhhHhhh---c--CCcccCccCCCeeehhhhhhCCCCCC
Q 047377           24 SMVDIVYALS---K--SDDLLSDISDDALSSSQLISGEKAID   60 (160)
Q Consensus        24 ~y~aPE~~~~---~--~~s~ksDv~s~Gvvl~elltg~~p~~   60 (160)
                      .|-+||....   +  .....+|||.|||+++-++||..|+.
T Consensus       185 ~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQ  226 (378)
T KOG1345|consen  185 NYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQ  226 (378)
T ss_pred             ccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcch
Confidence            4777775432   2  34678999999999999999999986

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=96.49  E-value=0.0036  Score=45.09  Aligned_cols=123  Identities=11%  Similarity=0.032  Sum_probs=69.1

Q ss_pred             HHHHhHhhhhcccCCCCCCCcchhhHhhhcC-CcccCccCCCeeehhhhhh-CCCCCCCCch-hHHHHHHHHHcCCcccc
Q 047377            5 MSAMGIAIACLHKDPSKRPSMVDIVYALSKS-DDLLSDISDDALSSSQLIS-GEKAIDEEGK-VLWAKVEGILEGNEGRK   81 (160)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~-~~~~~~~~~~~~~~~~~   81 (160)
                      +++||+-+-|-...+- +.-|.+|.++.+.+ |+..-|.||-||++.|+.. |++-|+..+. .....+...+...+++.
T Consensus       148 arafgipvrcysaevv-tlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~  226 (292)
T KOG0662|consen  148 ARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQ  226 (292)
T ss_pred             hhhcCCceEeeeceee-eeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCcccc
Confidence            4667777777554444 34688999887764 7788999999999999974 7777764432 22223333332211111


Q ss_pred             ccchhhhhccccCCCCCCH-----HH----HHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           82 VKRVKEWMDEILLQDSISM-----EG----VMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        82 ~~~~~~~~d~~l~~~~~~~-----~~----~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      =..+...-|-.. .+-+|.     +.    ...-.++.+.-+.-+|.+|-+..+.++
T Consensus       227 wps~t~lpdyk~-yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  227 WPSMTKLPDYKP-YPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             CCccccCCCCcc-cCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence            111112222221 122222     11    122356667777778889988765543

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.47  E-value=0.00079  Score=52.58  Aligned_cols=84  Identities=18%  Similarity=0.218  Sum_probs=51.8

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCC-CCCchhHHHH-HHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAI-DEEGKVLWAK-VEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .|+|-+|++-..-+.+..+|||+||+..+|+..+.--. .......... +...+            .-+...+     .
T Consensus       245 ~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i------------~~len~l-----q  307 (458)
T KOG1266|consen  245 LPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVI------------IGLENGL-----Q  307 (458)
T ss_pred             CCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhhe------------eeccCcc-----c
Confidence            58999999887778889999999999988886554321 1111111110 00001            0011111     1


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                             ...+..|++..|..||+|++++.
T Consensus       308 -------r~~i~kcl~~eP~~rp~ar~llf  330 (458)
T KOG1266|consen  308 -------RGSITKCLEGEPNGRPDARLLLF  330 (458)
T ss_pred             -------cCcCcccccCCCCCCcchhhhhc
Confidence                   34556799999999999998754

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.19  E-value=0.0032  Score=53.17  Aligned_cols=89  Identities=16%  Similarity=0.079  Sum_probs=54.8

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ..|.|||++.....+.++|+||+|++++-+.. |+.-+...+..+........               +..- ...+..+
T Consensus       173 ~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~---------------~~~~-~~~~s~~  236 (700)
T KOG2137|consen  173 LNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNL---------------LNAG-AFGYSNN  236 (700)
T ss_pred             cccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcc---------------cccc-ccccccc
Confidence            35899999999888999999999999999884 44444322221111100000               0000 1122233


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHH
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDI  127 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev  127 (160)
                      .+.++.+-+.+.+..+...||++..+
T Consensus       237 ~p~el~~~l~k~l~~~~~~rp~~~~l  262 (700)
T KOG2137|consen  237 LPSELRESLKKLLNGDSAVRPTLDLL  262 (700)
T ss_pred             CcHHHHHHHHHHhcCCcccCcchhhh
Confidence            34556666777889999999966554

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=96.16  E-value=0.0097  Score=44.21  Aligned_cols=106  Identities=17%  Similarity=0.067  Sum_probs=64.3

Q ss_pred             cCCCCCCCcchhhHhhh---cCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchhhhhccc
Q 047377           17 KDPSKRPSMVDIVYALS---KSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVKEWMDEI   92 (160)
Q Consensus        17 ~~~~~~~~y~aPE~~~~---~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~   92 (160)
                      ....+++.|++||....   ..++...|+|++|++++++++|..|+...... ........+.      .... ......
T Consensus       166 ~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~  238 (384)
T COG0515         166 STSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL------ELPT-PSLASP  238 (384)
T ss_pred             cccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHH------hcCC-cccccc
Confidence            34455678999999987   57889999999999999999999997633210 0111111111      0000 000000


Q ss_pred             cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           93 LLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        93 l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      . ...........+..+...|+..+|..|.+..+....
T Consensus       239 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         239 L-SPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             c-CccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            0 001011122456788888999999999988766653

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=96.09  E-value=0.004  Score=46.48  Aligned_cols=36  Identities=8%  Similarity=-0.088  Sum_probs=29.9

Q ss_pred             cchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCC
Q 047377           25 MVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAID   60 (160)
Q Consensus        25 y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~   60 (160)
                      |--||.+..- .|+..-|+|||||++.+|+..+.||-
T Consensus       198 fKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFF  234 (338)
T KOG0668|consen  198 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF  234 (338)
T ss_pred             cCCchheeechhccccHHHHHHHHHHHHHHhccCccc
Confidence            3457776554 57889999999999999999999986

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=95.94  E-value=0.0025  Score=53.07  Aligned_cols=39  Identities=8%  Similarity=-0.168  Sum_probs=34.0

Q ss_pred             CCCcchhhHhhhcCCc-ccCccCCCeeehhhhhhCCCCCC
Q 047377           22 RPSMVDIVYALSKSDD-LLSDISDDALSSSQLISGEKAID   60 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s-~ksDv~s~Gvvl~elltg~~p~~   60 (160)
                      +.+|.|||.+.+.+|- ...|||++||++|-++....||.
T Consensus       731 tv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  731 TVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             eccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            4689999999888775 56999999999999999888874

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=95.55  E-value=0.0069  Score=53.56  Aligned_cols=43  Identities=9%  Similarity=0.130  Sum_probs=39.1

Q ss_pred             CCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCC
Q 047377           18 DPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAID   60 (160)
Q Consensus        18 ~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~   60 (160)
                      ..-.++.|.+||...+..-...+|.|+.|++++|.++|.+||.
T Consensus       994 ~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen  994 AVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred             cccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence            3455689999999999999999999999999999999999986

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=93.14  E-value=0.034  Score=47.11  Aligned_cols=44  Identities=20%  Similarity=0.136  Sum_probs=36.9

Q ss_pred             cCCCC-CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCC
Q 047377           17 KDPSK-RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAID   60 (160)
Q Consensus        17 ~~~~~-~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~   60 (160)
                      ....+ .+.|+|||...+. ......|+||.|+++.-+++|..|..
T Consensus       186 ~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~  231 (601)
T KOG0590|consen  186 KDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWD  231 (601)
T ss_pred             ecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcc
Confidence            34444 7889999998874 55678999999999999999999976

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=90.58  E-value=0.089  Score=43.67  Aligned_cols=99  Identities=16%  Similarity=0.130  Sum_probs=58.1

Q ss_pred             cCCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCC
Q 047377           17 KDPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        17 ~~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      +.+.....|++||.. .+.++..+|+|++|.+.++.+++...........|..    ++               +...+.
T Consensus       286 ~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~----~r---------------~~~ip~  345 (524)
T KOG0601|consen  286 KRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ----LR---------------QGYIPL  345 (524)
T ss_pred             ecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc----cc---------------cccCch
Confidence            444455679999976 5778899999999999999988776543211111111    11               000012


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ++-......+.......++.++..|++.+ ++..|.-+..
T Consensus       346 e~~~~~s~~l~~~~~~~~d~~~~~~~~~q-~~~~l~~i~s  384 (524)
T KOG0601|consen  346 EFCEGGSSSLRSVTSQMLDEDPRLRLTAQ-ILTALNVIHS  384 (524)
T ss_pred             hhhcCcchhhhhHHHHhcCcchhhhhHHH-HHhccccccc
Confidence            22222222333466678888898888865 4444555543

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=82.39  E-value=3.8  Score=31.79  Aligned_cols=100  Identities=14%  Similarity=0.027  Sum_probs=62.3

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc-hhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG-KVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ++..|.++....+...+.+-|+||++-++.|+..|..|+.... ......+.....               ... .....
T Consensus       199 GT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~---------------~~~-~~~~~  262 (322)
T KOG1164|consen  199 GTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR---------------KLL-TDRFG  262 (322)
T ss_pred             CccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh---------------hhc-ccccc
Confidence            4468999998888899999999999999999999998874211 101111111110               000 00001


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ...+..+..+...+-..+-..+|....+...|+....
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~  299 (322)
T KOG1164|consen  263 DLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFD  299 (322)
T ss_pred             CCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHH
Confidence            1112334455555556888999999988888776654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	160
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	7e-10
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-05
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	5e-09
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	6e-05
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-08
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	8e-05

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 55.3 bits (134), Expect = 7e-10
 Identities = 15/85 (17%), Positives = 35/85 (41%), Gaps = 13/85 (15%)

Query: 52  LISGEKAID----EEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEGVMRAM 107
           +I+G  A+D     +  +   +   I   +E + ++     +D+ +  +      V    
Sbjct: 227 IITGLPAVDEHREPQLLLDIKEE--IE--DEEKTIEDY---IDKKM--NDADSTSVEAMY 277

Query: 108 GIAIACLHKDPSKRPSMVDIVHAVS 132
            +A  CLH+  +KRP +  +   + 
Sbjct: 278 SVASQCLHEKKNKRPDIKKVQQLLQ 302

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 42.9 bits (102), Expect = 1e-05
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 1   MESVMSAMGIAIACLHKDPSKRPSMVDIVYALS 33
             SV +   +A  CLH+  +KRP +  +   L 
Sbjct: 270 STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 52.6 bits (127), Expect = 5e-09
 Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 13/85 (15%)

Query: 52  LISGEKAID------EEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEGVMR 105
           LI+G++A D      ++  +L   V+G+L+       K+++  +D   LQ +   E V +
Sbjct: 228 LITGQRAFDLARLANDDDVMLLDWVKGLLKE------KKLEALVDV-DLQGNYKDEEVEQ 280

Query: 106 AMGIAIACLHKDPSKRPSMVDIVHA 130
            + +A+ C    P +RP M ++V  
Sbjct: 281 LIQVALLCTQSSPMERPKMSEVVRM 305

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 41.0 bits (97), Expect = 6e-05
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 1   MESVMSAMGIAIACLHKDPSKRPSMVDIVYALSKSDDLLSD 41
            E V   + +A+ C    P +RP M ++V  L + D L   
Sbjct: 275 DEEVEQLIQVALLCTQSSPMERPKMSEVVRML-EGDGLAER 314

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 51.4 bits (124), Expect = 1e-08
 Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 15/85 (17%)

Query: 52  LISGEKAID------EEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEGVMR 105
           ++    AI             WA         E     ++++ +D   L D I  E + +
Sbjct: 234 VLCARSAIVQSLPREMVNLAEWAV--------ESHNNGQLEQIVDP-NLADKIRPESLRK 284

Query: 106 AMGIAIACLHKDPSKRPSMVDIVHA 130
               A+ CL      RPSM D++  
Sbjct: 285 FGDTAVKCLALSSEDRPSMGDVLWK 309

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 40.7 bits (96), Expect = 8e-05
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 1   MESVMSAMGIAIACLHKDPSKRPSMVDIVYAL 32
            ES+      A+ CL      RPSM D+++ L
Sbjct: 279 PESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	160
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.82
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.81
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.81
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.81
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.8
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.74
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.73
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.69
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.68
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.68
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.65
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.64
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.63
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.62
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.62
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.59
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.59
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.59
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.59
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.59
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.59
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.59
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.58
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.58
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.58
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.57
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.57
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.57
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.57
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.57
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.57
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.57
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.57
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.56
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.56
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.56
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.55
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.55
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.55
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.55
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.54
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.54
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.54
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.54
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.54
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.54
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.54
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.54
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.53
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.53
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.53
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.53
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.53
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.53
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.53
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.53
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.52
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.52
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.52
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.52
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.52
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.52
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.52
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.52
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.52
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.52
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.52
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.51
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.51
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.51
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.51
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.51
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.5
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.5
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.5
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.5
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.5
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.5
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.5
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.5
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.49
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.49
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.49
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.49
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.49
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.49
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.49
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.48
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.48
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.48
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.48
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.48
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.48
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.47
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.47
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.47
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.47
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.46
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.46
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.46
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.46
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.45
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.45
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.44
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.44
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.44
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.44
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.43
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.43
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.43
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.43
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.43
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.43
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.43
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.43
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.42
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.42
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.42
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.42
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.42
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.42
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.42
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.42
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.41
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.41
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.41
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.41
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.41
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.41
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.41
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.4
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.4
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.4
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.4
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.39
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.39
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.39
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.39
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.39
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.38
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.38
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.38
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.38
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.38
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.38
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.38
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.38
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.38
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.38
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.38
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.38
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.37
3bhy_A	283	Death-associated protein kinase 3; death associate	99.37
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.37
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.37
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.37
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.36
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.36
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.36
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.36
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.36
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.36
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.36
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.36
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.36
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.35
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.35
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.35
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.35
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.35
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.34
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.34
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.34
3niz_A	311	Rhodanese family protein; structural genomics, str	99.34
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.34
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.34
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.34
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.34
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.34
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.34
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.34
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.34
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.34
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.34
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.33
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.33
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.33
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.33
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.33
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.33
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.33
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.33
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.32
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.32
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.32
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.32
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.32
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.32
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.32
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.32
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.32
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.32
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.32
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.31
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.31
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.31
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.31
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.31
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.3
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.3
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.3
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.3
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.3
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.3
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.29
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.29
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.29
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.29
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.28
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.28
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.28
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.28
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.27
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.27
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.27
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.27
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.27
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.26
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.25
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.25
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.25
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.25
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.24
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.24
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.24
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.24
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.23
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.23
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.22
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.22
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.21
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.19
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.17
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.14
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.11
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.02
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	98.99
3uqc_A	286	Probable conserved transmembrane protein; structur	98.98
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.85
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.2
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	88.94

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.82  E-value=1.1e-21  Score=150.42  Aligned_cols=96  Identities=15%  Similarity=0.073  Sum_probs=73.7

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+++.|||||++..+.++.++|||||||++|||+| |+.||......   .+...+.               ... ..+.
T Consensus       208 ~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~---~~~~~i~---------------~~~-~~~~  268 (308)
T 4gt4_A          208 LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ---DVVEMIR---------------NRQ-VLPC  268 (308)
T ss_dssp             CBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH---HHHHHHH---------------TTC-CCCC
T ss_pred             ccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH---HHHHHHH---------------cCC-CCCC
Confidence            44578999999999999999999999999999998 89999743321   1112221               111 2234


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      |..++..+.+++..||+.+|.+||+|.+|++.|+..
T Consensus       269 p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          269 PDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            445556788999999999999999999999999865

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.81  E-value=9.8e-22  Score=153.16  Aligned_cols=98  Identities=13%  Similarity=0.092  Sum_probs=73.6

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .++.|||||.+.++.|+.++|||||||++|||+| |+.||.......  .+...+.               ... ....|
T Consensus       249 gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~--~~~~~i~---------------~g~-~~~~p  310 (353)
T 4ase_A          249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLK---------------EGT-RMRAP  310 (353)
T ss_dssp             ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--HHHHHHH---------------HTC-CCCCC
T ss_pred             ccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH--HHHHHHH---------------cCC-CCCCC
Confidence            3468999999999999999999999999999998 899997322111  1111121               111 22333


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ..+...+.+++..||+.||.+||+|.+|++.|+++.+
T Consensus       311 ~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq  347 (353)
T 4ase_A          311 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  347 (353)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence            3444567889999999999999999999999998865

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.81  E-value=6.5e-21  Score=145.96  Aligned_cols=105  Identities=12%  Similarity=0.119  Sum_probs=75.1

Q ss_pred             CCCCCCcchhhHhhh---cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           19 PSKRPSMVDIVYALS---KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~---~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      ..++|.|||||++..   +.|+.++|||||||++|||+||+.||.......  .+...+.      .    ....|.+  
T Consensus       194 ~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~--~~~~~~~------~----~~~~p~~--  259 (307)
T 3omv_A          194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD--QIIFMVG------R----GYASPDL--  259 (307)
T ss_dssp             CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--HHHHHHH------T----TCCCCCS--
T ss_pred             cccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH--HHHHHHh------c----CCCCCCc--
Confidence            456799999999964   458999999999999999999999997322111  1111121      0    0111211  


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      ...+..++..+.+++.+||+.+|++||+|.+|+..|+.++..
T Consensus       260 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~  301 (307)
T 3omv_A          260 SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS  301 (307)
T ss_dssp             TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred             ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence            223334456778999999999999999999999999988654

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.81  E-value=3.8e-21  Score=148.55  Aligned_cols=100  Identities=11%  Similarity=0.045  Sum_probs=75.7

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ...++.|||||++..+.++.++|||||||++|||+| |+.||.........  .....                .. ..+
T Consensus       220 ~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~--~~i~~----------------g~-~~~  280 (329)
T 4aoj_A          220 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI--DCITQ----------------GR-ELE  280 (329)
T ss_dssp             CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHH--HHHHH----------------TC-CCC
T ss_pred             ccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHH--HHHHc----------------CC-CCC
Confidence            345678999999999999999999999999999998 89999743321111  11111                11 123


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      .|..++..+.+++.+||+.||++||+|.||++.|+.+.+.
T Consensus       281 ~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          281 RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence            3334446778999999999999999999999999998664

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.80  E-value=3.9e-21  Score=146.75  Aligned_cols=97  Identities=9%  Similarity=0.022  Sum_probs=74.2

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      +++.|||||.+..+.++.++|||||||++|||+| |+.||.........  .....                .. ..+.|
T Consensus       192 gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~--~~i~~----------------~~-~~~~p  252 (299)
T 4asz_A          192 LPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI--ECITQ----------------GR-VLQRP  252 (299)
T ss_dssp             ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH--HHHHH----------------TC-CCCCC
T ss_pred             cChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH--HHHHc----------------CC-CCCCC
Confidence            4678999999999999999999999999999998 89999743321111  11111                11 12333


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ..++..+.+++.+||+.||++||+|.+|+..|+++.+
T Consensus       253 ~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~  289 (299)
T 4asz_A          253 RTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK  289 (299)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            4445677899999999999999999999999998765

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.74  E-value=7.4e-20  Score=139.76  Aligned_cols=108  Identities=9%  Similarity=-0.029  Sum_probs=72.8

Q ss_pred             CCCCCcchhhHhhhc------CCcccCccCCCeeehhhhhhCCCCCCCCch------------hHHHHHHHHHcCCcccc
Q 047377           20 SKRPSMVDIVYALSK------SDDLLSDISDDALSSSQLISGEKAIDEEGK------------VLWAKVEGILEGNEGRK   81 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~------~~s~ksDv~s~Gvvl~elltg~~p~~~~~~------------~~~~~~~~~~~~~~~~~   81 (160)
                      .+++.|||||++.+.      .++.++|||||||++|||+||..|+.....            .....+...+.      
T Consensus       173 ~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~------  246 (303)
T 3hmm_A          173 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC------  246 (303)
T ss_dssp             -CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHT------
T ss_pred             cccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHh------
Confidence            467899999998654      477899999999999999999887641110            00111111110      


Q ss_pred             ccchhhhhccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377           82 VKRVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus        82 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                          ...++|.++....+.++...+.+++.+||+.||++||||.+|++.|+++.+.
T Consensus       247 ----~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          247 ----EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             ----TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ----cccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence                0111222201111235667889999999999999999999999999988654

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.73  E-value=4.2e-19  Score=137.37  Aligned_cols=100  Identities=15%  Similarity=0.073  Sum_probs=73.7

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..++|.|||||++.+..++.++||||+||++|||++|+.||..... .+..   ....+     .        +.  ..+
T Consensus       216 ~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~---~i~~~-----~--------~~--~~~  277 (336)
T 4g3f_A          216 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL---KIASE-----P--------PP--IRE  277 (336)
T ss_dssp             CCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHH---HHHHS-----C--------CG--GGG
T ss_pred             cccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH---HHHcC-----C--------CC--chh
Confidence            3578999999999999999999999999999999999999973221 1111   11110     0        00  112


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .+......+.+++.+||+.||.+||++.|+++.|....+
T Consensus       278 ~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~  316 (336)
T 4g3f_A          278 IPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ  316 (336)
T ss_dssp             SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            233334566889999999999999999999998877654

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.69  E-value=2.1e-18  Score=131.06  Aligned_cols=93  Identities=12%  Similarity=0.120  Sum_probs=64.3

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..++|.|||||.+. +.|+.++|||||||+++||+||+.||......  ..+...+.      .....    +.. ....
T Consensus       190 ~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~--~~~~~~i~------~~~~~----~~~-~~~~  255 (290)
T 3fpq_A          190 VIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA--AQIYRRVT------SGVKP----ASF-DKVA  255 (290)
T ss_dssp             SCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH--HHHHHHHT------TTCCC----GGG-GGCC
T ss_pred             cccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH--HHHHHHHH------cCCCC----CCC-CccC
Confidence            35679999999875 57999999999999999999999999632211  11112221      00000    011 1112


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                          ...+.+++.+||+.||.+|||+.|+++
T Consensus       256 ----~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          256 ----IPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ----CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                234678999999999999999999875

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.68  E-value=1.7e-17  Score=126.61  Aligned_cols=112  Identities=18%  Similarity=0.138  Sum_probs=86.9

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc----hhHHHHHHHHHcCCccccccchhhhhccccCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG----KVLWAKVEGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      +++.|+|||.+..+.++.++||||||++++|+++|+.||....    .....+......      ...+...+++.+ ..
T Consensus       203 gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~  275 (321)
T 2qkw_B          203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN------NGQLEQIVDPNL-AD  275 (321)
T ss_dssp             EETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHT------TTCCCSSSSSSC-TT
T ss_pred             CCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccc------cccHHHhcChhh-cc
Confidence            3578999999999999999999999999999999999986321    112222112221      333455566666 66


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccCCC
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSVS  139 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~~~  139 (160)
                      ..+......+.+++.+||+.+|.+||++.+|++.|+.+.....
T Consensus       276 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~  318 (321)
T 2qkw_B          276 KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE  318 (321)
T ss_dssp             CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSC
T ss_pred             ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhccc
Confidence            6778889999999999999999999999999999998876543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.68  E-value=1.6e-17  Score=126.77  Aligned_cols=109  Identities=22%  Similarity=0.337  Sum_probs=86.2

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCC------CchhHHHHHHHHHcCCccccccchhhhhccccC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDE------EGKVLWAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      +++.|+|||.+..+.++.++||||||++++|+++|+.||..      .......++.....      ........+..+ 
T Consensus       197 gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-  269 (326)
T 3uim_A          197 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK------EKKLEALVDVDL-  269 (326)
T ss_dssp             SCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTS------SCCSTTSSCTTC-
T ss_pred             CCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhh------chhhhhhcChhh-
Confidence            56889999999999999999999999999999999999961      11122222222222      334455666666 


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ...++......+.+++..||+.+|.+||++.+|++.|+....
T Consensus       270 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~  311 (326)
T 3uim_A          270 QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL  311 (326)
T ss_dssp             TTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred             ccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence            677888889999999999999999999999999999987643

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.65  E-value=2.5e-17  Score=128.00  Aligned_cols=91  Identities=16%  Similarity=0.122  Sum_probs=67.9

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .++|.|||||.+.+..|+.++||||+||++|||++|+.||.......  .+.....+       ..     +.+ ...+ 
T Consensus       186 ~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~--~~~~i~~~-------~~-----~~~-~~~~-  249 (350)
T 4b9d_A          186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN--LVLKIISG-------SF-----PPV-SLHY-  249 (350)
T ss_dssp             HSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHT-------CC-----CCC-CTTS-
T ss_pred             CCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHHHHcC-------CC-----CCC-CccC-
Confidence            36899999999999999999999999999999999999997443211  11122221       00     111 2223 


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                         ...+.+++.+||+.||.+||++.|+++
T Consensus       250 ---s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          250 ---SYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             ---CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence               345688999999999999999999976

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.64  E-value=3.6e-17  Score=126.97  Aligned_cols=94  Identities=13%  Similarity=0.077  Sum_probs=67.8

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..++|.|||||.+....|+.++||||+||+++||++|+.||.........   ..+.           ....+.+   ..
T Consensus       230 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~---~~i~-----------~~~~~~~---~~  292 (346)
T 4fih_A          230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM---KMIR-----------DNLPPRL---KN  292 (346)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---HHHH-----------HSSCCCC---SC
T ss_pred             cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH---HHHH-----------cCCCCCC---Cc
Confidence            45679999999999999999999999999999999999999743321111   1111           0001111   12


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +......+.+++.+||+.||.+||++.|+++
T Consensus       293 ~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          293 LHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            2223346688999999999999999998875

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.63  E-value=3.9e-17  Score=121.11  Aligned_cols=111  Identities=19%  Similarity=0.190  Sum_probs=77.5

Q ss_pred             HhHhhhhcccCCCCCCCcchhhHhhhcCCcc---cCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccc
Q 047377            8 MGIAIACLHKDPSKRPSMVDIVYALSKSDDL---LSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKR   84 (160)
Q Consensus         8 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~s~---ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ++++..........++.|+|||.+.....+.   ++||||||++++|+++|+.||..........  ....         
T Consensus       157 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~--~~~~---------  225 (271)
T 3kmu_A          157 ADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGM--KVAL---------  225 (271)
T ss_dssp             GGSCCTTSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHH--HHHH---------
T ss_pred             ccceeeecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHH--HHHh---------
Confidence            4445444445555678999999998665544   7999999999999999999997433211111  1111         


Q ss_pred             hhhhhccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           85 VKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        85 ~~~~~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                            ... ....+......+.+++..||+.+|.+||++.++++.|+.+..
T Consensus       226 ------~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          226 ------EGL-RPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             ------SCC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             ------cCC-CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence                  111 122223334567889999999999999999999999998854

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.62  E-value=8.7e-17  Score=121.30  Aligned_cols=91  Identities=15%  Similarity=0.104  Sum_probs=63.8

Q ss_pred             CCCCCCcchhhHhhhcCC-cccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           19 PSKRPSMVDIVYALSKSD-DLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~-s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..++|.|||||.+.+..+ +.++||||+||+++||++|+.||..........  ....               ...   .
T Consensus       171 ~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~--~i~~---------------~~~---~  230 (275)
T 3hyh_A          171 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFK--NISN---------------GVY---T  230 (275)
T ss_dssp             ----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH---------------TCC---C
T ss_pred             eeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHH--HHHc---------------CCC---C
Confidence            456799999999988776 579999999999999999999997443211111  1111               111   1


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +|......+.+++.+|++.||.+|||+.|+++
T Consensus       231 ~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          231 LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            22222345688999999999999999999976

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.62  E-value=1e-16  Score=122.46  Aligned_cols=86  Identities=9%  Similarity=0.021  Sum_probs=63.6

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..++|.|||||.+....++.++||||+||+++||++|+.||..........  ....               ..+   .+
T Consensus       186 ~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~--~i~~---------------~~~---~~  245 (304)
T 3ubd_A          186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMT--MILK---------------AKL---GM  245 (304)
T ss_dssp             CCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH---------------CCC---CC
T ss_pred             cccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHH--HHHc---------------CCC---CC
Confidence            456799999999999999999999999999999999999997443211111  2221               111   22


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSM  124 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~  124 (160)
                      |......+.+++.+||+.||.+||+.
T Consensus       246 p~~~s~~~~~li~~~L~~dP~~R~ta  271 (304)
T 3ubd_A          246 PQFLSPEAQSLLRMLFKRNPANRLGA  271 (304)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred             CCcCCHHHHHHHHHHcccCHHHCCCC
Confidence            22233456889999999999999984

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.59  E-value=2.5e-16  Score=117.10  Aligned_cols=97  Identities=16%  Similarity=0.130  Sum_probs=71.7

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+....++.++||||+|++++++++|+.||..........  ....               ... ....+
T Consensus       175 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~--~~~~---------------~~~-~~~~~  236 (271)
T 3dtc_A          175 AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY--GVAM---------------NKL-ALPIP  236 (271)
T ss_dssp             -CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH--HHHT---------------SCC-CCCCC
T ss_pred             CCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--hhhc---------------CCC-CCCCC
Confidence            45688999999999999999999999999999999999997433211111  1111               111 12223


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      ......+.+++.+||+.+|.+||++.++++.|+.+
T Consensus       237 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          237 STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             cccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            33345678999999999999999999999999864

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.59  E-value=1.6e-16  Score=121.72  Aligned_cols=96  Identities=15%  Similarity=0.134  Sum_probs=72.3

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.|+|||.+.++.++.++||||||++++|+++ |+.||.........                  ..+.... ....+.
T Consensus       182 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~------------------~~~~~~~-~~~~~~  242 (327)
T 3poz_A          182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS------------------SILEKGE-RLPQPP  242 (327)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH------------------HHHHTTC-CCCCCT
T ss_pred             cccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHH------------------HHHHcCC-CCCCCc
Confidence            457999999999999999999999999999999 99999733221111                  1111111 112233


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .....+..++.+||+.+|.+||++.++++.|+.+..
T Consensus       243 ~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          243 ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             TBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            334567889999999999999999999999988765

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.59  E-value=1.1e-16  Score=122.58  Aligned_cols=91  Identities=16%  Similarity=0.021  Sum_probs=67.3

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..++|.|||||.+.+..++.++||||+||+++||++|+.||..........  ....               ..+   .+
T Consensus       194 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~--~i~~---------------~~~---~~  253 (311)
T 4aw0_A          194 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA--KIIK---------------LEY---DF  253 (311)
T ss_dssp             CCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH---------------TCC---CC
T ss_pred             cccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHc---------------CCC---CC
Confidence            457899999999999999999999999999999999999997443221111  2221               111   12


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      |......+.+++.+|++.||.+||++.|++.
T Consensus       254 p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~  284 (311)
T 4aw0_A          254 PEKFFPKARDLVEKLLVLDATKRLGCEEMEG  284 (311)
T ss_dssp             CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred             CcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence            2222345688999999999999999988643

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.59  E-value=4.7e-16  Score=118.20  Aligned_cols=103  Identities=18%  Similarity=0.193  Sum_probs=74.6

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+....++.++||||||++++|+++|+.||................+            ..+.+ ...+ 
T Consensus       164 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~------------~~~~~-~~~~-  229 (307)
T 2eva_A          164 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG------------TRPPL-IKNL-  229 (307)
T ss_dssp             -CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTT------------CCCCC-BTTC-
T ss_pred             CCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcC------------CCCCc-cccc-
Confidence            356899999999988999999999999999999999999973322111111111110            00111 2223 


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccCCC
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSVS  139 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~~~  139 (160)
                         ...+.+++.+||+.+|.+||++.++++.|+.+.+...
T Consensus       230 ---~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  266 (307)
T 2eva_A          230 ---PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP  266 (307)
T ss_dssp             ---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred             ---CHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence               3456889999999999999999999999999876443

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.59  E-value=1.1e-15  Score=118.78  Aligned_cols=105  Identities=8%  Similarity=-0.007  Sum_probs=77.5

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCC--chhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEE--GKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      +++.|+|||.+.+..++.++||||||++++|+++|+.||...  ............       ...+..++++.+....+
T Consensus       223 gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~  295 (364)
T 3op5_A          223 GTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRY-------RENIASLMDKCFPAANA  295 (364)
T ss_dssp             CCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHH-------HHCHHHHHHHHSCTTCC
T ss_pred             CCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHh-------hhhHHHHHHHhcccccC
Confidence            678999999999989999999999999999999999999732  111111111111       22334455544412233


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      +    ..+..++..||..+|.+||++.+|++.|+.+..
T Consensus       296 ~----~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~  329 (364)
T 3op5_A          296 P----GEIAKYMETVKLLDYTEKPLYENLRDILLQGLK  329 (364)
T ss_dssp             C----HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred             H----HHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence            4    456888999999999999999999999988765

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.59  E-value=1.5e-16  Score=126.48  Aligned_cols=93  Identities=13%  Similarity=0.086  Sum_probs=66.9

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .++|.|||||.+....|+.++||||+||+++||++|+.||.........   ..+.           ....+.+   ..+
T Consensus       308 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~---~~i~-----------~~~~~~~---~~~  370 (423)
T 4fie_A          308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM---KMIR-----------DNLPPRL---KNL  370 (423)
T ss_dssp             EECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH---HHHH-----------HSCCCCC---SCT
T ss_pred             ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH---HHHH-----------cCCCCCC---ccc
Confidence            4568999999999999999999999999999999999999743321111   1111           0011111   111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+||..||.+||++.|+++
T Consensus       371 ~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          371 HKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             TSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            222345688999999999999999998875

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.58  E-value=2.6e-16  Score=122.83  Aligned_cols=95  Identities=13%  Similarity=0.076  Sum_probs=71.6

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+....++.++||||||++++||++ |..||.........   ..+.               ... ....+..
T Consensus       269 ~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~---~~~~---------------~~~-~~~~~~~  329 (370)
T 2psq_A          269 VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---KLLK---------------EGH-RMDKPAN  329 (370)
T ss_dssp             GGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH---HHHH---------------TTC-CCCCCTT
T ss_pred             cceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH---HHHh---------------cCC-CCCCCCC
Confidence            57999999999999999999999999999999 99998732211111   1111               111 1223333


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      +...+..++..||+.+|.+||++.++++.|+++.+
T Consensus       330 ~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          330 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            44567889999999999999999999999998864

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.58  E-value=1.6e-15  Score=114.70  Aligned_cols=110  Identities=18%  Similarity=0.276  Sum_probs=79.6

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+++.|+|||.+. +.++.++||||||++++++++|..||..... .....+......    ....+..++++.+  ...
T Consensus       196 ~g~~~y~aPE~~~-~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~  268 (307)
T 2nru_A          196 VGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED----EEKTIEDYIDKKM--NDA  268 (307)
T ss_dssp             CSCGGGCCHHHHT-TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHT----TSCCHHHHSCSSC--SCC
T ss_pred             CCCcCcCChHHhc-CCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhh----hhhhhhhhccccc--ccc
Confidence            4567899999875 4688999999999999999999999973221 111111111110    1233445555554  345


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      +......+..++..||+.+|.+||++.+|++.|+.+..
T Consensus       269 ~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence            67778889999999999999999999999999998743

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.58  E-value=1.3e-16  Score=124.69  Aligned_cols=95  Identities=12%  Similarity=-0.001  Sum_probs=71.3

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+..+.++.++||||||++++|+++ |..||........   ...+.               ... ....+..
T Consensus       279 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~---~~~~~---------------~~~-~~~~~~~  339 (377)
T 3cbl_A          279 VKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT---REFVE---------------KGG-RLPCPEL  339 (377)
T ss_dssp             GGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH---HHHHH---------------TTC-CCCCCTT
T ss_pred             cCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHH---------------cCC-CCCCCCC
Confidence            46999999999999999999999999999998 9999874322111   11121               111 1122333


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ++..+.+++..||+.+|.+||++.+|++.|+.+..
T Consensus       340 ~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~  374 (377)
T 3cbl_A          340 CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK  374 (377)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence            34567889999999999999999999999998754

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.57  E-value=3.1e-16  Score=125.35  Aligned_cols=97  Identities=11%  Similarity=0.013  Sum_probs=73.2

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|+|||.+..+.++.++||||||++++|+++ |+.||.........   ..+.               ... ....+.
T Consensus       349 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~---~~i~---------------~~~-~~~~p~  409 (450)
T 1k9a_A          349 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV---PRVE---------------KGY-KMDAPD  409 (450)
T ss_dssp             CTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHH---HHHH---------------TTC-CCCCCT
T ss_pred             CcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH---HHHH---------------cCC-CCCCCC
Confidence            468999999999999999999999999999998 99999732211111   1111               111 122333


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      .+...+.+++..||+.+|.+||++.+|++.|+.+...
T Consensus       410 ~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          410 GCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence            4446778999999999999999999999999988654

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.57  E-value=3.4e-15  Score=115.10  Aligned_cols=108  Identities=6%  Similarity=-0.017  Sum_probs=74.1

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCC--chhHHHHHHHHHcCCccccccchhhhhccccCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEE--GKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      ..+++.|+|||.+.+..++.++||||||++++|+++|+.||...  .............       ..+...+.......
T Consensus       220 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~  292 (345)
T 2v62_A          220 HNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLL-------DELPQSVLKWAPSG  292 (345)
T ss_dssp             SCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHH-------HTTTHHHHHHSCTT
T ss_pred             cCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhc-------ccccHHHHhhcccc
Confidence            34568999999999889999999999999999999999999531  1111111111111       11111111111011


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      .++    ..+.+++..||..+|.+||++.+|++.|+.+...
T Consensus       293 ~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  329 (345)
T 2v62_A          293 SSC----CEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIP  329 (345)
T ss_dssp             SCC----HHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCC
T ss_pred             ccH----HHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCc
Confidence            223    4678899999999999999999999999987653

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.57  E-value=5.7e-16  Score=118.04  Aligned_cols=101  Identities=14%  Similarity=0.081  Sum_probs=72.9

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..+++.|+|||.+....++.++||||||++++|+++|+.||..........  ....               ... ....
T Consensus       199 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~--~~~~---------------~~~-~~~~  260 (309)
T 3p86_A          199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVA--AVGF---------------KCK-RLEI  260 (309)
T ss_dssp             ---CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH--HHHH---------------SCC-CCCC
T ss_pred             CCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHh---------------cCC-CCCC
Confidence            345689999999999999999999999999999999999997433211111  1100               000 1122


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      +......+.+++.+||+.+|.+||++.++++.|+.+...
T Consensus       261 ~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          261 PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            333335678899999999999999999999999988654

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.57  E-value=4.8e-16  Score=124.31  Aligned_cols=97  Identities=12%  Similarity=0.042  Sum_probs=72.9

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|+|||.+..+.++.++||||||++++|+++ |+.||.........   ..+.               ... ....+.
T Consensus       348 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~---~~i~---------------~~~-~~~~~~  408 (454)
T 1qcf_A          348 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI---RALE---------------RGY-RMPRPE  408 (454)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH---HHHH---------------HTC-CCCCCT
T ss_pred             cccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHH---HHHH---------------cCC-CCCCCC
Confidence            357999999999999999999999999999999 99999733221111   1111               111 112233


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      .++..+.+++.+||+.+|.+||++.+|+..|+.+...
T Consensus       409 ~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          409 NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred             CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence            3445678999999999999999999999999998654

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.57  E-value=1.2e-15  Score=114.70  Aligned_cols=105  Identities=13%  Similarity=-0.034  Sum_probs=73.0

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+++.|+|||.+....++.++||||||++++|+++|+.||...... ..........       ... ....+.+ ...+
T Consensus       179 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~-~~~~  249 (298)
T 1csn_A          179 SGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGE-------KKQ-STPLREL-CAGF  249 (298)
T ss_dssp             CSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHH-------HHH-HSCHHHH-TTTS
T ss_pred             CCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHh-------hcc-CccHHHH-HhhC
Confidence            3568899999999999999999999999999999999999742211 1111001110       000 0000111 1122


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      +    ..+.+++..||+.+|.+||++.+|++.|+++...
T Consensus       250 ~----~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~  284 (298)
T 1csn_A          250 P----EEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER  284 (298)
T ss_dssp             C----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             c----HHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence            3    4678899999999999999999999999988753

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.57  E-value=5.4e-16  Score=116.25  Aligned_cols=99  Identities=22%  Similarity=0.156  Sum_probs=70.3

Q ss_pred             CCCCCcchhhHh--hhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           20 SKRPSMVDIVYA--LSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        20 ~~~~~y~aPE~~--~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..++.|+|||.+  ....++.++||||+|++++|+++|+.||................               ... ...
T Consensus       187 ~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---------------~~~-~~~  250 (287)
T 4f0f_A          187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE---------------EGL-RPT  250 (287)
T ss_dssp             CCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHH---------------SCC-CCC
T ss_pred             CCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhc---------------cCC-CCC
Confidence            456789999998  34567899999999999999999999997332211111111111               111 222


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      .+......+.+++..||+.+|.+||++.++++.|+++
T Consensus       251 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          251 IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             CCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            2333345678999999999999999999999999864

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.57  E-value=4e-16  Score=121.57  Aligned_cols=97  Identities=9%  Similarity=0.004  Sum_probs=72.7

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.|+|||.+..+.++.++||||||++++|+++ |..||.........   ..+.               ... ....+.
T Consensus       249 t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~---~~i~---------------~~~-~~~~~~  309 (367)
T 3l9p_A          249 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL---EFVT---------------SGG-RMDPPK  309 (367)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH---HHHH---------------TTC-CCCCCT
T ss_pred             cccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH---HHHH---------------cCC-CCCCCc
Confidence            568999999999999999999999999999998 99999743321111   1111               010 112222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      .....+.+++..||+.+|.+||++.+|++.|+.+.+.
T Consensus       310 ~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~  346 (367)
T 3l9p_A          310 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  346 (367)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence            3334678899999999999999999999999988764

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.56  E-value=2.9e-16  Score=120.35  Aligned_cols=100  Identities=16%  Similarity=0.093  Sum_probs=73.6

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.|+|||.+..+.++.++||||||++++|+++ |..||.........   ..+.               ... ....+.
T Consensus       217 t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~---~~~~---------------~~~-~~~~~~  277 (325)
T 3kul_A          217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI---SSVE---------------EGY-RLPAPM  277 (325)
T ss_dssp             CGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHH---HHHH---------------TTC-CCCCCT
T ss_pred             cccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHH---HHHH---------------cCC-CCCCCC
Confidence            346999999999999999999999999999998 99998633221111   1111               111 112233


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccCCCC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSVSD  140 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~~~~  140 (160)
                      .....+.+++..||..+|.+||++.+|++.|+.+......
T Consensus       278 ~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~  317 (325)
T 3kul_A          278 GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES  317 (325)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred             CcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence            3345678899999999999999999999999999765443

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.56  E-value=2.6e-16  Score=118.48  Aligned_cols=105  Identities=10%  Similarity=0.024  Sum_probs=71.3

Q ss_pred             CCCCCcchhhHhhhc------CCcccCccCCCeeehhhhhhC----------CCCCCCC--chhHHHHHHHHHcCCcccc
Q 047377           20 SKRPSMVDIVYALSK------SDDLLSDISDDALSSSQLISG----------EKAIDEE--GKVLWAKVEGILEGNEGRK   81 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~------~~s~ksDv~s~Gvvl~elltg----------~~p~~~~--~~~~~~~~~~~~~~~~~~~   81 (160)
                      .+++.|+|||.+...      .++.++||||||++++|+++|          ..||...  .......+.....      
T Consensus       178 ~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~------  251 (301)
T 3q4u_A          178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVC------  251 (301)
T ss_dssp             CCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHT------
T ss_pred             ccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHh------
Confidence            456899999999876      556799999999999999999          7777521  1111111111111      


Q ss_pred             ccchhhhhccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377           82 VKRVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus        82 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                          .....+.++....+......+.+++..||+.+|.+||++.+|++.|+++
T Consensus       252 ----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          252 ----VDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             ----TSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----ccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence                0000111101112235667889999999999999999999999999876

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.56  E-value=8.2e-16  Score=124.33  Aligned_cols=95  Identities=14%  Similarity=0.054  Sum_probs=72.1

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+..+.++.++||||||++++||++ |..||.........   ..+               .... ....+..
T Consensus       383 ~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~---~~~---------------~~~~-~~~~~~~  443 (495)
T 1opk_A          383 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY---ELL---------------EKDY-RMERPEG  443 (495)
T ss_dssp             GGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH---HHH---------------HTTC-CCCCCTT
T ss_pred             cceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHH---HHH---------------HcCC-CCCCCCC
Confidence            57999999999999999999999999999999 99998633211111   111               1111 2233334


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      +...+.+++..||+.+|.+||++.+|++.|+.+.+
T Consensus       444 ~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          444 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             CCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence            44567899999999999999999999999998854

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.55  E-value=9.5e-16  Score=115.15  Aligned_cols=103  Identities=8%  Similarity=-0.037  Sum_probs=73.1

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc----hhHHHHHHHHHcCCccccccchhhhhccccC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG----KVLWAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      ..+++.|+|||.+.+..++.++||||||++++|+++|+.||....    ......+.....           ....+.+ 
T Consensus       175 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~-  242 (296)
T 3uzp_A          175 LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM-----------STPIEVL-  242 (296)
T ss_dssp             CCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH-----------HSCHHHH-
T ss_pred             cccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccccc-----------CCchHHH-
Confidence            345678999999999999999999999999999999999997321    111111101000           0000011 


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      ...++    ..+..++..||+.+|.+||++.+|++.|+.+...
T Consensus       243 ~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  281 (296)
T 3uzp_A          243 CKGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  281 (296)
T ss_dssp             TTTSC----HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HhhCC----HHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence            12233    4578899999999999999999999999988764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.55  E-value=4e-16  Score=120.37  Aligned_cols=97  Identities=13%  Similarity=0.073  Sum_probs=70.8

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.|+|||.+....++.++||||||++++|+++ |..||.........  ...+.               ... ....+.
T Consensus       258 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~--~~~~~---------------~~~-~~~~~~  319 (359)
T 3vhe_A          258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF--CRRLK---------------EGT-RMRAPD  319 (359)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH--HHHHH---------------HTC-CCCCCT
T ss_pred             CceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHH--HHHHH---------------cCC-CCCCCC
Confidence            357999999999999999999999999999998 99999733211110  01111               110 112222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .....+.+++..||+.+|.+||++.+|++.|+.+.+
T Consensus       320 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  355 (359)
T 3vhe_A          320 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  355 (359)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence            233457889999999999999999999999998754

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.55  E-value=1.2e-15  Score=122.09  Aligned_cols=96  Identities=16%  Similarity=0.066  Sum_probs=72.5

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+..+.++.++||||||++++|+++ |+.||.......   +...+.               ... ....+..
T Consensus       345 ~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~~~i~---------------~~~-~~~~~~~  405 (452)
T 1fmk_A          345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---VLDQVE---------------RGY-RMPCPPE  405 (452)
T ss_dssp             GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHHHHH---------------TTC-CCCCCTT
T ss_pred             ccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH---HHHHHH---------------cCC-CCCCCCC
Confidence            57999999999999999999999999999999 999986332111   111111               111 1123334


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      +...+.+++.+||+.+|.+||++.+|++.|+.+...
T Consensus       406 ~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          406 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence            445678999999999999999999999999998654

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.55  E-value=8.1e-16  Score=117.98  Aligned_cols=96  Identities=17%  Similarity=0.139  Sum_probs=72.1

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.|+|||.+.+..++.++||||||++++|+++ |..||..........   .+               .... ....+.
T Consensus       182 t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~---~~---------------~~~~-~~~~~~  242 (327)
T 3lzb_A          182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---IL---------------EKGE-RLPQPP  242 (327)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH---HH---------------HTTC-CCCCCT
T ss_pred             cccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH---HH---------------HcCC-CCCCCc
Confidence            357999999999999999999999999999999 999997433211111   11               1111 112222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .....+..++..||+.+|.+||++.++++.|+++..
T Consensus       243 ~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          243 ICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            334467889999999999999999999999998875

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.54  E-value=5.9e-16  Score=118.41  Aligned_cols=96  Identities=10%  Similarity=0.088  Sum_probs=70.4

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.|+|||.+..+.++.++||||||++++|+++ |+.||.........   ..+.               ... ....+.
T Consensus       180 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~---~~~~---------------~~~-~~~~~~  240 (325)
T 3kex_A          180 PIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP---DLLE---------------KGE-RLAQPQ  240 (325)
T ss_dssp             CTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHH---HHHH---------------TTC-BCCCCT
T ss_pred             cccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHH---HHHH---------------cCC-CCCCCC
Confidence            358999999999999999999999999999999 99999743321111   1111               000 111111


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .....+..++.+||+.+|.+||++.++++.|+.+..
T Consensus       241 ~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          241 ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            222345789999999999999999999999998864

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.54  E-value=4.8e-16  Score=117.07  Aligned_cols=109  Identities=12%  Similarity=0.044  Sum_probs=73.5

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCcccc---ccchhhhhccccCCCCCC
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRK---VKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~l~~~~~~   99 (160)
                      +.|+|||.+....++.++||||||++++|+++|..|+........    ....... ..   .......+.... ....+
T Consensus       181 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~  254 (295)
T 3ugc_A          181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM----RMIGNDK-QGQMIVFHLIELLKNNG-RLPRP  254 (295)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHH----HHHCTTC-CTHHHHHHHHHHHHTTC-CCCCC
T ss_pred             cceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHH----hhhcCcc-ccchhHHHHHHHHhccC-cCCCC
Confidence            459999999999999999999999999999999998762211110    1110000 00   000111111111 22334


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      ..+...+.+++..||+.+|.+||++.++++.|+.+...
T Consensus       255 ~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~  292 (295)
T 3ugc_A          255 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN  292 (295)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             cCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            44456788999999999999999999999999988654

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.54  E-value=1.2e-15  Score=126.44  Aligned_cols=95  Identities=11%  Similarity=-0.003  Sum_probs=72.7

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||++..+.++.++|||||||+++||++ |+.||........   ...+.               ... ....+..
T Consensus       503 ~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~---~~~i~---------------~~~-~~~~p~~  563 (613)
T 2ozo_A          503 LKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV---MAFIE---------------QGK-RMECPPE  563 (613)
T ss_dssp             CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHH---HHHHH---------------TTC-CCCCCTT
T ss_pred             cceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH---HHHHH---------------cCC-CCCCCCc
Confidence            57999999999999999999999999999998 9999973322111   11111               111 1233344


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      +...+.+++..||+.+|.+||++.+|++.|+.+..
T Consensus       564 ~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~  598 (613)
T 2ozo_A          564 CPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  598 (613)
T ss_dssp             CCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence            45677899999999999999999999999998754

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.54  E-value=5.5e-16  Score=121.15  Aligned_cols=96  Identities=17%  Similarity=0.106  Sum_probs=70.4

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.|+|||.+..+.++.++||||||++++|+++ |+.||........   ...+.               ... ....+.
T Consensus       213 ~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~---~~~i~---------------~~~-~~~~~~  273 (373)
T 2qol_A          213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV---IKAVD---------------EGY-RLPPPM  273 (373)
T ss_dssp             -CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHH---HHHHH---------------TTE-ECCCCT
T ss_pred             CCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHH---------------cCC-CCCCCc
Confidence            357999999999999999999999999999997 9999863321111   11111               111 112223


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .+...+.+++..||+.+|.+||++.+|++.|+++..
T Consensus       274 ~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  309 (373)
T 2qol_A          274 DCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR  309 (373)
T ss_dssp             TCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence            344567899999999999999999999999998865

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.54  E-value=8.9e-16  Score=116.96  Aligned_cols=102  Identities=12%  Similarity=0.106  Sum_probs=73.2

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|+|||.+....++.++||||||++++|+++ |..||..........  ....               ..  ....+.
T Consensus       202 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~--~~~~---------------~~--~~~~~~  262 (323)
T 3qup_A          202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYN--YLIG---------------GN--RLKQPP  262 (323)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH--HHHT---------------TC--CCCCCT
T ss_pred             cccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHH--HHhc---------------CC--CCCCCC
Confidence            357999999999999999999999999999999 899987332211111  1111               00  112222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccCCCCCC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSVSDIS  142 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~~~~~~  142 (160)
                      .....+.+++.+||+.+|.+||++.++++.|+.+..+.+...
T Consensus       263 ~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~  304 (323)
T 3qup_A          263 ECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS  304 (323)
T ss_dssp             TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcC
Confidence            333567899999999999999999999999999988765443

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.54  E-value=9.6e-16  Score=114.66  Aligned_cols=96  Identities=16%  Similarity=0.035  Sum_probs=70.2

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|+|||.+..+.++.++||||||++++|+++ |+.||..........   .+.               ... ....+.
T Consensus       177 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~---~~~---------------~~~-~~~~~~  237 (281)
T 3cc6_A          177 PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG---VLE---------------KGD-RLPKPD  237 (281)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHH---HHH---------------HTC-CCCCCT
T ss_pred             CcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHH---HHh---------------cCC-CCCCCC
Confidence            457999999999999999999999999999998 999986322111111   110               000 111122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .....+..++.+||..+|.+||++.++++.|+.+.+
T Consensus       238 ~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          238 LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence            223457889999999999999999999999998754

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.54  E-value=1.3e-15  Score=114.33  Aligned_cols=102  Identities=8%  Similarity=-0.024  Sum_probs=72.5

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCch----hHHHHHHHHHcCCccccccchhhhhccccC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGK----VLWAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      ...++.|+|||.+....++.++||||||++++|+++|+.||.....    .....+....          ... ..+.+ 
T Consensus       175 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~-  242 (296)
T 4hgt_A          175 LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK----------MST-PIEVL-  242 (296)
T ss_dssp             CCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH----------HHS-CHHHH-
T ss_pred             cCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccc----------ccc-hhhhh-
Confidence            3456899999999999999999999999999999999999973211    1111100000          000 00011 


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ...++    ..+..++..||+.+|.+||++.+|++.|+++..
T Consensus       243 ~~~~~----~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~  280 (296)
T 4hgt_A          243 CKGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  280 (296)
T ss_dssp             TTTSC----HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred             hccCC----HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence            12223    467889999999999999999999999998876

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.54  E-value=1.1e-15  Score=117.22  Aligned_cols=98  Identities=11%  Similarity=0.017  Sum_probs=72.5

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .++.|+|||.+..+.++.++||||||++++|+++ |..||..........  ....               ..  ....+
T Consensus       238 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~--~~~~---------------~~--~~~~~  298 (343)
T 1luf_A          238 IPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY--YVRD---------------GN--ILACP  298 (343)
T ss_dssp             BCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH--HHHT---------------TC--CCCCC
T ss_pred             ccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHH--HHhC---------------CC--cCCCC
Confidence            3467999999999999999999999999999999 999986332211111  1111               11  11222


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      ......+..++..||+.+|.+||++.+|++.|+++.+.
T Consensus       299 ~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~  336 (343)
T 1luf_A          299 ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER  336 (343)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred             CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence            23335678899999999999999999999999998654

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.53  E-value=9.1e-16  Score=117.84  Aligned_cols=97  Identities=11%  Similarity=0.029  Sum_probs=70.8

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+..+.++.++||||||++++|+++ |..||........  +...+.               ... ....+..
T Consensus       238 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~--~~~~~~---------------~~~-~~~~~~~  299 (344)
T 1rjb_A          238 VKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN--FYKLIQ---------------NGF-KMDQPFY  299 (344)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH--HHHHHH---------------TTC-CCCCCTT
T ss_pred             cCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH--HHHHHh---------------cCC-CCCCCCC
Confidence            57999999999999999999999999999998 9999963221111  111111               111 1122223


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      ....+..++..||..+|.+||++.++++.|+.+...
T Consensus       300 ~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  335 (344)
T 1rjb_A          300 ATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD  335 (344)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            345678899999999999999999999999988653

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.53  E-value=1.2e-15  Score=115.45  Aligned_cols=96  Identities=14%  Similarity=0.114  Sum_probs=71.3

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|+|||.+....++.++||||+|++++|+++ |..||.........   ..+.               ... ....+.
T Consensus       215 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~---~~~~---------------~~~-~~~~~~  275 (314)
T 2ivs_A          215 PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF---NLLK---------------TGH-RMERPD  275 (314)
T ss_dssp             CGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH---HHHH---------------TTC-CCCCCT
T ss_pred             cccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH---HHhh---------------cCC-cCCCCc
Confidence            357999999999999999999999999999999 99998633221111   1111               111 112222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .....+.+++..||+.+|.+||++.++++.|+++..
T Consensus       276 ~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  311 (314)
T 2ivs_A          276 NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV  311 (314)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            334567889999999999999999999999998754

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.53  E-value=1e-15  Score=115.12  Aligned_cols=95  Identities=12%  Similarity=-0.031  Sum_probs=71.4

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+....++.++||||||++++|+++ |+.||.........   ..+.               ... ....+..
T Consensus       184 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~---~~~~---------------~~~-~~~~~~~  244 (291)
T 1xbb_A          184 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT---AMLE---------------KGE-RMGCPAG  244 (291)
T ss_dssp             GGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH---HHHH---------------TTC-CCCCCTT
T ss_pred             ceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH---HHHH---------------cCC-CCCCCCC
Confidence            67999999998899999999999999999999 99999743321111   1111               010 1122233


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ....+..++..||+.+|.+||++.+|++.|+++..
T Consensus       245 ~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  279 (291)
T 1xbb_A          245 CPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  279 (291)
T ss_dssp             CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            34567899999999999999999999999998754

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.53  E-value=1.5e-15  Score=113.50  Aligned_cols=98  Identities=12%  Similarity=0.003  Sum_probs=72.3

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ..+.|+|||.+..+.++.++||||+|++++|+++ |+.|+.........   ..+.               ... ....+
T Consensus       176 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~---~~~~---------------~~~-~~~~~  236 (278)
T 1byg_A          176 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV---PRVE---------------KGY-KMDAP  236 (278)
T ss_dssp             CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH---HHHT---------------TTC-CCCCC
T ss_pred             ccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH---HHHh---------------cCC-CCCCc
Confidence            3468999999999999999999999999999998 99998632211111   1111               111 11222


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      ......+..++..||+.+|.+||++.++++.|+.+...
T Consensus       237 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          237 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence            23345678899999999999999999999999988653

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.53  E-value=1.6e-15  Score=112.61  Aligned_cols=96  Identities=13%  Similarity=0.028  Sum_probs=70.3

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+....++.++||||+|++++|+++ |+.||..........  ....                .. ....+..
T Consensus       169 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~--~~~~----------------~~-~~~~~~~  229 (268)
T 3sxs_A          169 VKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL--KVSQ----------------GH-RLYRPHL  229 (268)
T ss_dssp             GGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH--HHHT----------------TC-CCCCCTT
T ss_pred             cccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHH--HHHc----------------CC-CCCCCCc
Confidence            46999999999899999999999999999998 999987433211111  1111                00 0111111


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      ....+..++..||+.+|.+||++.++++.|+.+...
T Consensus       230 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          230 ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            234568899999999999999999999999998653

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.53  E-value=1.9e-15  Score=113.60  Aligned_cols=103  Identities=15%  Similarity=0.143  Sum_probs=71.2

Q ss_pred             CCCCCcchhhHhh---hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCC
Q 047377           20 SKRPSMVDIVYAL---SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        20 ~~~~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      .+++.|+|||.+.   ...++.++||||+|++++|+++|+.||.......  .+...+.      ..    ...+.+  .
T Consensus       183 ~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~~------~~----~~~~~~--~  248 (289)
T 3og7_A          183 SGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD--QIIEMVG------RG----SLSPDL--S  248 (289)
T ss_dssp             -CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH--HHHHHHH------HT----SCCCCT--T
T ss_pred             CCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH--HHHHHhc------cc----ccCcch--h
Confidence            4568899999986   5678889999999999999999999997322111  1111111      00    001111  1


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .....+...+.+++..||+.+|.+||++.++++.|+.+.+
T Consensus       249 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          249 KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            1222334567899999999999999999999999998854

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.53  E-value=1.6e-15  Score=113.60  Aligned_cols=96  Identities=13%  Similarity=0.027  Sum_probs=70.4

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.|+|||.+....++.++||||||++++|+++ |..||..........  ....                .. ....+.
T Consensus       180 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~--~i~~----------------~~-~~~~~~  240 (281)
T 1mp8_A          180 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG--RIEN----------------GE-RLPMPP  240 (281)
T ss_dssp             CGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH--HHHT----------------TC-CCCCCT
T ss_pred             cccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHH--HHHc----------------CC-CCCCCC
Confidence            357999999999999999999999999999996 999986332211111  1111                00 112222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .....+..++..||+.+|.+||++.++++.|+.+..
T Consensus       241 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  276 (281)
T 1mp8_A          241 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  276 (281)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            333567889999999999999999999999998753

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.53  E-value=1.4e-15  Score=116.25  Aligned_cols=114  Identities=12%  Similarity=0.040  Sum_probs=71.7

Q ss_pred             CCCCCcchhhHhhh-----cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhh-hhcccc
Q 047377           20 SKRPSMVDIVYALS-----KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKE-WMDEIL   93 (160)
Q Consensus        20 ~~~~~y~aPE~~~~-----~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~l   93 (160)
                      ..++.|+|||.+..     ..++.++||||||++++|+++|+.||................. .. ....... ......
T Consensus       194 ~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~  271 (322)
T 3soc_A          194 VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ-HP-SLEDMQEVVVHKKK  271 (322)
T ss_dssp             CCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS-SC-CHHHHHHHHTTSCC
T ss_pred             ccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc-CC-chhhhhhhhhcccC
Confidence            34688999999976     4567889999999999999999999863211000000000000 00 0000001 111111


Q ss_pred             CCCCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           94 LQDSI-----SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        94 ~~~~~-----~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                       ....     .......+.+++.+||+.||.+||++.+|++.|+.+..
T Consensus       272 -~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          272 -RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             -CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence             1111     12455678999999999999999999999999998864

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.52  E-value=1.4e-15  Score=114.26  Aligned_cols=96  Identities=10%  Similarity=-0.002  Sum_probs=72.1

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.|+|||.+....++.++||||||++++|+++ |+.||.........   ..+.               ... ....+.
T Consensus       176 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~---~~i~---------------~~~-~~~~~~  236 (287)
T 1u59_A          176 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM---AFIE---------------QGK-RMECPP  236 (287)
T ss_dssp             CGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHH---HHHH---------------TTC-CCCCCT
T ss_pred             cccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH---HHHh---------------cCC-cCCCCC
Confidence            467999999998899999999999999999998 99999733221111   1111               010 112233


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .....+..++..||..+|.+||++.++++.|+.+..
T Consensus       237 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  272 (287)
T 1u59_A          237 ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  272 (287)
T ss_dssp             TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            334567889999999999999999999999998865

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.52  E-value=1.5e-15  Score=112.89  Aligned_cols=96  Identities=10%  Similarity=0.068  Sum_probs=70.8

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|+|||.+....++.++||||+|++++++++ |+.||..........  ....                .. ....+.
T Consensus       170 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~--~~~~----------------~~-~~~~~~  230 (269)
T 4hcu_A          170 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE--DIST----------------GF-RLYKPR  230 (269)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH--HHHT----------------TC-CCCCCT
T ss_pred             ccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHH--HHhc----------------Cc-cCCCCC
Confidence            357999999999999999999999999999999 999987433211111  1111                00 111122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .....+.+++..||+.+|.+||++.++++.|+.+..
T Consensus       231 ~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          231 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence            223457889999999999999999999999998754

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.52  E-value=1.2e-15  Score=119.25  Aligned_cols=96  Identities=13%  Similarity=0.069  Sum_probs=71.9

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+....++.++||||||++++|+++ |..|+.......   +...+.               ... ....+..
T Consensus       257 ~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~---~~~~~~---------------~~~-~~~~~~~  317 (382)
T 3tt0_A          257 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---LFKLLK---------------EGH-RMDKPSN  317 (382)
T ss_dssp             GGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---HHHHHH---------------TTC-CCCCCSS
T ss_pred             cceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHH---------------cCC-CCCCCcc
Confidence            57999999999999999999999999999999 999987433211   111121               111 1122222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      ....+..++..||+.+|.+||++.+|++.|+.+...
T Consensus       318 ~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  353 (382)
T 3tt0_A          318 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  353 (382)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            335678899999999999999999999999988753

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.52  E-value=1.2e-15  Score=116.69  Aligned_cols=96  Identities=13%  Similarity=0.056  Sum_probs=69.9

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+..+.++.++||||||++++|+++ |..||.........  .....               ... ....+..
T Consensus       230 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~--~~~~~---------------~~~-~~~~~~~  291 (333)
T 2i1m_A          230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF--YKLVK---------------DGY-QMAQPAF  291 (333)
T ss_dssp             GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHH--HHHHH---------------HTC-CCCCCTT
T ss_pred             ccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHH--HHHHh---------------cCC-CCCCCCC
Confidence            57999999999999999999999999999998 99998632211110  01111               111 1112222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ....+..++..||+.+|.+||++.+|++.|+.+.+
T Consensus       292 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~  326 (333)
T 2i1m_A          292 APKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ  326 (333)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence            23567889999999999999999999999987753

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.52  E-value=6e-16  Score=118.29  Aligned_cols=115  Identities=10%  Similarity=-0.048  Sum_probs=73.6

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .++.|+|||.+....++.++||||+|++++++++|+.|+..........  ..... ...........+.... ....+.
T Consensus       192 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~-~~~~~~  267 (327)
T 3lxl_A          192 SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRM--MGCER-DVPALSRLLELLEEGQ-RLPAPP  267 (327)
T ss_dssp             SCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH--CC-----CCHHHHHHHHHHTTC-CCCCCT
T ss_pred             ccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhh--ccccc-ccccHHHHHHHhhccc-CCCCCC
Confidence            3455999999999999999999999999999999999986322111100  00000 0000011112222222 233344


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccCCC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSVS  139 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~~~  139 (160)
                      .....+.+++..||+.+|.+||++.++++.|+.+.....
T Consensus       268 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~  306 (327)
T 3lxl_A          268 ACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR  306 (327)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred             cccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence            445677899999999999999999999999999876443

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.52  E-value=3.3e-16  Score=118.80  Aligned_cols=101  Identities=18%  Similarity=0.150  Sum_probs=72.3

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+....++.++||||||++++|+++|..|+.........            .........+... ...++
T Consensus       183 ~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~------------~~~~~~~~~~~~~-~~~~~  249 (310)
T 3s95_A          183 VGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD------------FGLNVRGFLDRYC-PPNCP  249 (310)
T ss_dssp             CSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT------------SSBCHHHHHHHTC-CTTCC
T ss_pred             CCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH------------HhhhhhccccccC-CCCCC
Confidence            4567899999999999999999999999999999999988621100000            0011111122222 22222


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                          ..+..++.+||+.+|.+||++.++++.|+.+...
T Consensus       250 ----~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~  283 (310)
T 3s95_A          250 ----PSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH  283 (310)
T ss_dssp             ----TTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence                3568899999999999999999999999998754

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.52  E-value=1.4e-15  Score=115.12  Aligned_cols=96  Identities=17%  Similarity=0.108  Sum_probs=70.3

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+....++.++||||||++++|+++ |..||.........  ...+.               ... ....+..
T Consensus       211 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~--~~~~~---------------~~~-~~~~~~~  272 (313)
T 1t46_A          211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF--YKMIK---------------EGF-RMLSPEH  272 (313)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH--HHHHH---------------HTC-CCCCCTT
T ss_pred             ceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH--HHHhc---------------cCC-CCCCccc
Confidence            46999999999999999999999999999998 99998632211110  01111               111 1111222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ....+..++..||+.+|.+||++.++++.|+++..
T Consensus       273 ~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  307 (313)
T 1t46_A          273 APAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS  307 (313)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            23567889999999999999999999999998764

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.52  E-value=2.7e-15  Score=117.31  Aligned_cols=99  Identities=12%  Similarity=0.066  Sum_probs=71.3

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.|+|||.+..+.++.++||||||++++|+++ |..||..........  ....               ..  ....+.
T Consensus       259 ~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~--~~~~---------------~~--~~~~p~  319 (373)
T 3c1x_A          259 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV--YLLQ---------------GR--RLLQPE  319 (373)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHH--HHHT---------------TC--CCCCCT
T ss_pred             cccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHH--HHHc---------------CC--CCCCCC
Confidence            357999999999999999999999999999999 677776322111111  1111               00  111122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccCCC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSVS  139 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~~~  139 (160)
                      .+...+.+++..||+.+|.+||++.++++.|+.+.....
T Consensus       320 ~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~  358 (373)
T 3c1x_A          320 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  358 (373)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence            233467889999999999999999999999999876543

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.52  E-value=4.1e-15  Score=113.86  Aligned_cols=104  Identities=12%  Similarity=-0.001  Sum_probs=71.9

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..+++.|+|||.+.+..++.++||||||++++|+++|+.||..... ...........       ..... ....+ ...
T Consensus       177 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~-------~~~~~-~~~~~-~~~  247 (330)
T 2izr_A          177 LTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGD-------TKRAT-PIEVL-CEN  247 (330)
T ss_dssp             CCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHH-------HHHHS-CHHHH-TTT
T ss_pred             cCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHh-------hhccC-CHHHH-hcc
Confidence            3456899999999999999999999999999999999999974221 11111111110       00000 00000 011


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                          .+ .+..++..||+.+|.+||++.+|++.|+.+..
T Consensus       248 ----~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~  281 (330)
T 2izr_A          248 ----FP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD  281 (330)
T ss_dssp             ----CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             ----Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence                12 67889999999999999999999999987764

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.52  E-value=1.7e-15  Score=116.44  Aligned_cols=97  Identities=13%  Similarity=0.120  Sum_probs=71.6

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.|+|||.+..+.++.++||||||++++|+++ |+.||........   ...+.               ... ....+.
T Consensus       213 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~---~~~~~---------------~~~-~~~~~~  273 (333)
T 1mqb_A          213 PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV---MKAIN---------------DGF-RLPTPM  273 (333)
T ss_dssp             CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH---HHHHH---------------TTC-CCCCCT
T ss_pred             cccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHH---HHHHH---------------CCC-cCCCcc
Confidence            357999999998999999999999999999998 9999863322111   11111               000 111222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      .....+..++.+||+.+|.+||++.++++.|+++...
T Consensus       274 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  310 (333)
T 1mqb_A          274 DCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  310 (333)
T ss_dssp             TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            3345678899999999999999999999999988654

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.52  E-value=1.2e-15  Score=115.51  Aligned_cols=96  Identities=14%  Similarity=0.085  Sum_probs=70.0

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+..+.++.++||||||++++|+++ |..||........  +...+.               ... ....+..
T Consensus       214 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~--~~~~~~---------------~~~-~~~~~~~  275 (316)
T 2xir_A          214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FCRRLK---------------EGT-RMRAPDY  275 (316)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH--HHHHHH---------------HTC-CCCCCTT
T ss_pred             eeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH--HHHHhc---------------cCc-cCCCCCC
Confidence            57999999999999999999999999999998 9999863221110  001111               000 1111222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ....+..++..||+.+|.+||++.++++.|+.+.+
T Consensus       276 ~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  310 (316)
T 2xir_A          276 TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  310 (316)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            23456889999999999999999999999998864

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.51  E-value=2.5e-15  Score=124.94  Aligned_cols=94  Identities=12%  Similarity=-0.022  Sum_probs=72.0

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+..+.++.++||||||++++|+++ |+.||.........   ..+.               ... ....+..
T Consensus       536 ~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~---~~i~---------------~~~-~~~~p~~  596 (635)
T 4fl3_A          536 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT---AMLE---------------KGE-RMGCPAG  596 (635)
T ss_dssp             GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH---HHHH---------------TTC-CCCCCTT
T ss_pred             eeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH---HHHH---------------cCC-CCCCCCC
Confidence            56999999999999999999999999999998 99999743321111   1121               111 2233334


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      +...+.+++..||+.+|.+||++.+|++.|+++.
T Consensus       597 ~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~  630 (635)
T 4fl3_A          597 CPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  630 (635)
T ss_dssp             CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            4467789999999999999999999999998764

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.51  E-value=4.1e-15  Score=113.59  Aligned_cols=109  Identities=9%  Similarity=0.049  Sum_probs=72.2

Q ss_pred             CCCCCcchhhHhhhcCCccc------CccCCCeeehhhhhhC----------CCCCCCC--chhHHHHHHHHHcCCcccc
Q 047377           20 SKRPSMVDIVYALSKSDDLL------SDISDDALSSSQLISG----------EKAIDEE--GKVLWAKVEGILEGNEGRK   81 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~k------sDv~s~Gvvl~elltg----------~~p~~~~--~~~~~~~~~~~~~~~~~~~   81 (160)
                      .+++.|+|||.+.....+.+      +||||||++++||++|          +.|+...  .......+.....      
T Consensus       207 ~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~------  280 (337)
T 3mdy_A          207 VGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVC------  280 (337)
T ss_dssp             CSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHT------
T ss_pred             ccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHh------
Confidence            45688999999987766655      9999999999999999          5555411  0001111111110      


Q ss_pred             ccchhhhhccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccCC
Q 047377           82 VKRVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSV  138 (160)
Q Consensus        82 ~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~~  138 (160)
                          .....+.++....+..+...+.+++..||+.+|.+||++.+|++.|+++.+..
T Consensus       281 ----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  333 (337)
T 3mdy_A          281 ----IKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ  333 (337)
T ss_dssp             ----TSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             ----hhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence                00011111000112267778899999999999999999999999999987643

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.51  E-value=8.6e-15  Score=113.07  Aligned_cols=107  Identities=6%  Similarity=-0.101  Sum_probs=73.7

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc--hhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG--KVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..++.|+|||.+.+..++.++||||||++++|+++|+.||....  ..........+.       .......+.......
T Consensus       229 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~  301 (352)
T 2jii_A          229 EGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFV-------DKPGPFVGPCGHWIR  301 (352)
T ss_dssp             CSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHH-------HSCCCEECTTSCEEC
T ss_pred             cCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhcc-------CChhhhhhhccccCC
Confidence            55689999999998899999999999999999999999997322  111111111111       000111111100011


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      ++    ..+..++..||+.+|.+||++.+|++.|+.+...
T Consensus       302 ~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  337 (352)
T 2jii_A          302 PS----ETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD  337 (352)
T ss_dssp             CC----HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             Cc----HHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence            22    4668899999999999999999999999988764

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.51  E-value=1.3e-15  Score=116.18  Aligned_cols=89  Identities=11%  Similarity=0.043  Sum_probs=60.5

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .++|.|||||.+.+..|+.++||||+||+++||++   ||..... ....+ ..+.              ....  ++..
T Consensus       191 ~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~-~~~~~-~~~~--------------~~~~--p~~~  249 (299)
T 4g31_A          191 VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME-RVRTL-TDVR--------------NLKF--PPLF  249 (299)
T ss_dssp             -CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH-HHHHH-HHHH--------------TTCC--CHHH
T ss_pred             ccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH-HHHHH-HHHh--------------cCCC--CCCC
Confidence            47899999999999999999999999999999996   6642111 11111 1111              0010  0111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .........++.+||+.||.+||++.|+++
T Consensus       250 ~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          250 TQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            122234567899999999999999999876

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.51  E-value=3.7e-15  Score=112.92  Aligned_cols=101  Identities=14%  Similarity=0.114  Sum_probs=70.7

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ..++.|+|||.+..+.++.++||||||++++++++|+.||........... ..+.      ..     ..+.+....+ 
T Consensus       197 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~------~~-----~~~~~~~~~~-  263 (310)
T 2wqm_A          197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC-KKIE------QC-----DYPPLPSDHY-  263 (310)
T ss_dssp             --CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHH-HHHH------TT-----CSCCCCTTTS-
T ss_pred             CCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHH-HHhh------cc-----cCCCCccccc-
Confidence            345789999999999999999999999999999999999863322111111 1111      00     0011101122 


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                         ...+..++..||+.||.+||++.+|++.|+++..
T Consensus       264 ---~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~  297 (310)
T 2wqm_A          264 ---SEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA  297 (310)
T ss_dssp             ---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence               3456889999999999999999999999999865

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.50  E-value=2e-15  Score=114.54  Aligned_cols=98  Identities=13%  Similarity=0.079  Sum_probs=71.9

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ..+.|+|||.+....++.++||||||++++|+++ |..||..........  ....               . . ....+
T Consensus       211 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~--~~~~---------------~-~-~~~~~  271 (313)
T 3brb_A          211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYD--YLLH---------------G-H-RLKQP  271 (313)
T ss_dssp             CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH--HHHT---------------T-C-CCCCB
T ss_pred             CCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHH--HHHc---------------C-C-CCCCC
Confidence            3467999999999999999999999999999999 888886332211111  1111               0 0 11122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      ......+.+++..||..+|.+||++.++++.|+++.+.
T Consensus       272 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~  309 (313)
T 3brb_A          272 EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES  309 (313)
T ss_dssp             TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            22335678899999999999999999999999988654

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.50  E-value=2.2e-15  Score=115.55  Aligned_cols=96  Identities=13%  Similarity=0.072  Sum_probs=71.4

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.|+|||.+..+.++.++||||||++++|+++ |..||.........   ..+.               ... ....+.
T Consensus       222 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~---~~~~---------------~~~-~~~~~~  282 (334)
T 2pvf_A          222 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---KLLK---------------EGH-RMDKPA  282 (334)
T ss_dssp             CGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH---HHHH---------------HTC-CCCCCT
T ss_pred             ccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHH---HHHh---------------cCC-CCCCCc
Confidence            367999999999999999999999999999999 99998643221111   1111               000 111222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .....+..++..||+.+|.+||++.++++.|+++.+
T Consensus       283 ~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~  318 (334)
T 2pvf_A          283 NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  318 (334)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            233567889999999999999999999999999865

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.50  E-value=2.6e-15  Score=112.46  Aligned_cols=95  Identities=14%  Similarity=0.054  Sum_probs=71.0

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+..+.++.++||||+|++++++++ |..|+.........   ..+               .... ....+..
T Consensus       176 ~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~---~~~---------------~~~~-~~~~~~~  236 (288)
T 3kfa_A          176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY---ELL---------------EKDY-RMERPEG  236 (288)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH---HHH---------------HTTC-CCCCCTT
T ss_pred             cCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH---HHH---------------hccC-CCCCCCC
Confidence            46999999999999999999999999999999 99998633321111   111               1111 1122233


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ....+.+++..|+..+|.+||++.++++.|+.+.+
T Consensus       237 ~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~  271 (288)
T 3kfa_A          237 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  271 (288)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence            34567899999999999999999999999998754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.50  E-value=3.2e-15  Score=111.81  Aligned_cols=96  Identities=15%  Similarity=0.063  Sum_probs=70.7

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.|+|||.+....++.++||||+|++++|+++ |+.||..........  ....                .. ....+.
T Consensus       184 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~--~~~~----------------~~-~~~~~~  244 (283)
T 3gen_A          184 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE--HIAQ----------------GL-RLYRPH  244 (283)
T ss_dssp             CGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH--HHHT----------------TC-CCCCCT
T ss_pred             CcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHH--HHhc----------------cc-CCCCCC
Confidence            457999999999999999999999999999998 999987433211111  1111                10 111122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .....+.+++..||+.+|.+||++.++++.|+++..
T Consensus       245 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          245 LASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD  280 (283)
T ss_dssp             TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence            223457889999999999999999999999998753

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.50  E-value=9.2e-16  Score=115.65  Aligned_cols=110  Identities=10%  Similarity=0.029  Sum_probs=72.1

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCc-cccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNE-GRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      +++.|+|||.+....++.++||||+|++++|+++|..|+.......    ........ ..........+.... ....+
T Consensus       191 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  265 (302)
T 4e5w_A          191 SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALF----LKMIGPTHGQMTVTRLVNTLKEGK-RLPCP  265 (302)
T ss_dssp             CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH----HHHHCSCCGGGHHHHHHHHHHTTC-CCCCC
T ss_pred             CCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHH----hhccCCcccccCHHHHHHHHhccC-CCCCC
Confidence            3456999999999999999999999999999999998864211100    01100000 000001111111111 22333


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      ......+.+++..||+.+|.+||++.++++.|+.+.
T Consensus       266 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          266 PNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            344467789999999999999999999999999864

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.50  E-value=2.9e-15  Score=110.92  Aligned_cols=97  Identities=10%  Similarity=0.056  Sum_probs=70.9

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ..+.|+|||.+....++.++||||+|++++++++ |..||..........  ....                .. ....+
T Consensus       167 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~--~i~~----------------~~-~~~~~  227 (267)
T 3t9t_A          167 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE--DIST----------------GF-RLYKP  227 (267)
T ss_dssp             CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH--HHHT----------------TC-CCCCC
T ss_pred             ccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHH--HHhc----------------CC-cCCCC
Confidence            3457999999999999999999999999999999 899986433211111  1111                00 11111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ......+.+++..||+.+|.+||++.++++.|+.+..
T Consensus       228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            2223456889999999999999999999999998854

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.50  E-value=4.4e-15  Score=121.11  Aligned_cols=97  Identities=15%  Similarity=0.062  Sum_probs=72.6

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|+|||.+..+.++.++||||||++++||++ |+.||.......   +...+.               ... ....+.
T Consensus       427 ~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~---~~~~i~---------------~~~-~~~~~~  487 (535)
T 2h8h_A          427 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE---VLDQVE---------------RGY-RMPCPP  487 (535)
T ss_dssp             CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH---HHHHHH---------------TTC-CCCCCT
T ss_pred             cccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHH---------------cCC-CCCCCC
Confidence            357999999999999999999999999999999 899986332111   111111               111 112233


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      .+...+.+++.+||+.+|.+||++.+|++.|+.+...
T Consensus       488 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          488 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred             CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence            3445678999999999999999999999999998653

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.50  E-value=4.5e-15  Score=114.37  Aligned_cols=94  Identities=12%  Similarity=0.072  Sum_probs=65.8

Q ss_pred             CCCCCcchhhHhhh-----------cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhh
Q 047377           20 SKRPSMVDIVYALS-----------KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEW   88 (160)
Q Consensus        20 ~~~~~y~aPE~~~~-----------~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (160)
                      .+++.|+|||.+..           +.++.++||||||++++|+++|+.||....... ...               ...
T Consensus       170 ~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~---------------~~~  233 (343)
T 3dbq_A          170 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-SKL---------------HAI  233 (343)
T ss_dssp             CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-HHH---------------HHH
T ss_pred             cCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH-HHH---------------HHH
Confidence            45789999999875           678999999999999999999999996322111 111               112


Q ss_pred             hccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           89 MDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        89 ~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      +++.. ...++......+.+++..||+.+|.+||++.++++.
T Consensus       234 ~~~~~-~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          234 IDPNH-EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             HCTTS-CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hcCCc-ccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            22222 222333233466889999999999999999999763

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.49  E-value=3.6e-15  Score=113.96  Aligned_cols=97  Identities=9%  Similarity=0.004  Sum_probs=71.6

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.|+|||.+..+.++.++||||||++++|+++ |..||.........   ..+.               ... ....+.
T Consensus       208 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~---~~~~---------------~~~-~~~~~~  268 (327)
T 2yfx_A          208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL---EFVT---------------SGG-RMDPPK  268 (327)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH---HHHH---------------TTC-CCCCCT
T ss_pred             CcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHH---HHHh---------------cCC-CCCCCC
Confidence            467999999999999999999999999999998 99998643321111   1111               000 111122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      .....+..++..||+.+|.+||++.++++.|+.+.+.
T Consensus       269 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~  305 (327)
T 2yfx_A          269 NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  305 (327)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence            2334678899999999999999999999999988664

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.49  E-value=4e-15  Score=111.50  Aligned_cols=97  Identities=10%  Similarity=0.042  Sum_probs=70.9

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.|+|||.+....++.++||||||++++++++ |+.||..........  ....               ... ....+.
T Consensus       187 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~--~~~~---------------~~~-~~~~~~  248 (291)
T 1u46_A          187 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILH--KIDK---------------EGE-RLPRPE  248 (291)
T ss_dssp             CGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH--HHHT---------------SCC-CCCCCT
T ss_pred             CceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHH--HHHc---------------cCC-CCCCCc
Confidence            347999999998899999999999999999999 999986433211111  1111               000 111222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .....+.+++..||..+|.+||++.++++.|+++..
T Consensus       249 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          249 DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             CcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence            233567889999999999999999999999998864

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.49  E-value=3.5e-15  Score=114.04  Aligned_cols=99  Identities=12%  Similarity=0.051  Sum_probs=73.1

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|+|||.+....++.++||||+|++++|+++ |+.||........   ...+.               ... ....+.
T Consensus       204 ~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~---~~~~~---------------~~~-~~~~~~  264 (327)
T 1fvr_A          204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL---YEKLP---------------QGY-RLEKPL  264 (327)
T ss_dssp             CTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH---HHHGG---------------GTC-CCCCCT
T ss_pred             CccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHH---HHHhh---------------cCC-CCCCCC
Confidence            467999999998889999999999999999998 9999964332111   11111               111 112222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccCCC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSVS  139 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~~~  139 (160)
                      .....+..++.+||..+|.+||++.++++.|+.+.....
T Consensus       265 ~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  303 (327)
T 1fvr_A          265 NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK  303 (327)
T ss_dssp             TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred             CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence            233567889999999999999999999999998876543

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.49  E-value=6.8e-16  Score=117.76  Aligned_cols=113  Identities=9%  Similarity=0.009  Sum_probs=75.1

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .++.|+|||.+....++.++||||+|++++|+++|..|+..........  ..... .......+...+.... ....+.
T Consensus       199 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~-~~~~~~  274 (318)
T 3lxp_A          199 SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLEL--IGIAQ-GQMTVLRLTELLERGE-RLPRPD  274 (318)
T ss_dssp             CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH--HCSCC-HHHHHHHHHHHHHTTC-CCCCCT
T ss_pred             CCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhh--hcccc-cchhHHHHHHHHhccc-CCCCCc
Confidence            3456999999999999999999999999999999999986321111000  00000 0000011122222222 223344


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      .....+.+++..||+.+|.+||++.++++.|+.+...
T Consensus       275 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  311 (318)
T 3lxp_A          275 KCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK  311 (318)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence            4456788999999999999999999999999988653

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.49  E-value=2.3e-15  Score=118.30  Aligned_cols=94  Identities=12%  Similarity=0.058  Sum_probs=65.1

Q ss_pred             CCCCCCcchhhHhhh-----------cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhh
Q 047377           19 PSKRPSMVDIVYALS-----------KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKE   87 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~-----------~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (160)
                      ..+++.|+|||++..           +.++.++|||||||+++||++|+.||...... ...+..               
T Consensus       216 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-~~~~~~---------------  279 (390)
T 2zmd_A          216 QVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-ISKLHA---------------  279 (390)
T ss_dssp             SCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-HHHHHH---------------
T ss_pred             CCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH-HHHHHH---------------
Confidence            346789999999865           46889999999999999999999999632211 111111               


Q ss_pred             hhccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           88 WMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        88 ~~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ++++.. ...++......+.+++.+||+.+|.+||++.++++
T Consensus       280 ~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          280 IIDPNH-EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             HHCTTS-CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HhCccc-cCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence            222221 11222222346688999999999999999999975

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.49  E-value=9.2e-15  Score=110.63  Aligned_cols=93  Identities=16%  Similarity=0.046  Sum_probs=66.9

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+....++.++||||+|++++|+++|..||..........  ....      ..      .+   ....+
T Consensus       177 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~--~~~~------~~------~~---~~~~~  239 (297)
T 3fxz_A          177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY--LIAT------NG------TP---ELQNP  239 (297)
T ss_dssp             CSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--HHHH------HC------SC---CCSCG
T ss_pred             cCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHh------CC------CC---CCCCc
Confidence            45678999999999999999999999999999999999997433211111  1111      00      01   11222


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+||+.||.+||++.++++
T Consensus       240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            233355788999999999999999999876

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.49  E-value=4.1e-15  Score=112.87  Aligned_cols=99  Identities=14%  Similarity=0.055  Sum_probs=68.6

Q ss_pred             CCCcchhhHhhhcC---CcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           22 RPSMVDIVYALSKS---DDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        22 ~~~y~aPE~~~~~~---~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ++.|+|||.+....   ++.++||||||++++|+++|+.||..           ....     .......+.... ....
T Consensus       206 t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~-----------~~~~-----~~~~~~~~~~~~-~~~~  268 (317)
T 2buj_A          206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM-----------VFQK-----GDSVALAVQNQL-SIPQ  268 (317)
T ss_dssp             CGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHH-----------HHHT-----TSCHHHHHHCC---CCC
T ss_pred             CcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhh-----------hhcc-----cchhhHHhhccC-CCCc
Confidence            67899999986543   68899999999999999999999851           0000     000111111111 1111


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      +......+..++.+||+.+|.+||++.++++.|+.+...
T Consensus       269 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  307 (317)
T 2buj_A          269 SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP  307 (317)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred             cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence            122234678899999999999999999999999998654

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.48  E-value=3.5e-15  Score=114.31  Aligned_cols=107  Identities=9%  Similarity=0.006  Sum_probs=71.7

Q ss_pred             CCCCCcchhhHhhhc------CCcccCccCCCeeehhhhhhC----------CCCCCCCc--hhHHHHHHHHHcCCcccc
Q 047377           20 SKRPSMVDIVYALSK------SDDLLSDISDDALSSSQLISG----------EKAIDEEG--KVLWAKVEGILEGNEGRK   81 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~------~~s~ksDv~s~Gvvl~elltg----------~~p~~~~~--~~~~~~~~~~~~~~~~~~   81 (160)
                      ..++.|+|||.+...      .++.++||||||++++|+++|          ..||....  ......+...+.      
T Consensus       212 ~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~------  285 (342)
T 1b6c_B          212 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC------  285 (342)
T ss_dssp             CCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHT------
T ss_pred             CcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHH------
Confidence            456889999998765      334789999999999999999          66765211  001111111111      


Q ss_pred             ccchhhhhccccCCCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377           82 VKRVKEWMDEILLQDS-ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus        82 ~~~~~~~~d~~l~~~~-~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                          .....+.+ ... ........+.+++.+||+.+|.+||++.+|++.|+.+.+.
T Consensus       286 ----~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~  337 (342)
T 1b6c_B          286 ----EQKLRPNI-PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  337 (342)
T ss_dssp             ----TSCCCCCC-CGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             ----HHHhCCCC-cccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence                01111222 111 1235667889999999999999999999999999998654

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.48  E-value=4.6e-15  Score=110.72  Aligned_cols=96  Identities=9%  Similarity=-0.016  Sum_probs=70.7

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|+|||.+..+.++.++||||||++++|+++ |+.||.........   ..+.               ... ....+.
T Consensus       173 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~---~~~~---------------~~~-~~~~~~  233 (279)
T 1qpc_A          173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI---QNLE---------------RGY-RMVRPD  233 (279)
T ss_dssp             CTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH---HHHH---------------TTC-CCCCCT
T ss_pred             ccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHH---HHHh---------------ccc-CCCCcc
Confidence            457999999998999999999999999999999 89998633221111   1111               000 111122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .....+..++..|+..+|.+||++.++++.|+.+..
T Consensus       234 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  269 (279)
T 1qpc_A          234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (279)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence            233567889999999999999999999999998864

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.48  E-value=1.3e-15  Score=116.13  Aligned_cols=95  Identities=14%  Similarity=0.061  Sum_probs=56.9

Q ss_pred             CCCCcchhhHh---hhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           21 KRPSMVDIVYA---LSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        21 ~~~~y~aPE~~---~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      .++.|+|||.+   ....++.++||||||++++|+++|+.||......      ....               ... ...
T Consensus       212 ~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~------~~~~---------------~~~-~~~  269 (337)
T 3ll6_A          212 TTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL------RIVN---------------GKY-SIP  269 (337)
T ss_dssp             ------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------------------------------C-CCC
T ss_pred             CCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH------Hhhc---------------Ccc-cCC
Confidence            56789999998   5667889999999999999999999998622110      0110               000 000


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      .+......+..++..||+.+|.+||++.++++.|+.+...
T Consensus       270 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~  309 (337)
T 3ll6_A          270 PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA  309 (337)
T ss_dssp             TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            0111112357889999999999999999999999988763

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.48  E-value=1e-14  Score=110.13  Aligned_cols=103  Identities=15%  Similarity=0.126  Sum_probs=73.0

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+....++.++||||+|++++|+++|+.||.........  ...+.       ...... .... ...+ 
T Consensus       173 ~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~--~~~~~-------~~~~~~-~~~~-~~~~-  240 (294)
T 4eqm_A          173 LGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA--IKHIQ-------DSVPNV-TTDV-RKDI-  240 (294)
T ss_dssp             --CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH--HHHHS-------SCCCCH-HHHS-CTTS-
T ss_pred             ccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHhh-------ccCCCc-chhc-ccCC-
Confidence            3578999999999999999999999999999999999999744321111  12221       000000 0111 1223 


Q ss_pred             HHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHccccC
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRP-SMVDIVHAVSKSDDS  137 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RP-s~~ev~~~L~~l~~~  137 (160)
                         +..+..++.+|++.+|.+|| ++.++.+.|+.+...
T Consensus       241 ---~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~  276 (294)
T 4eqm_A          241 ---PQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE  276 (294)
T ss_dssp             ---CHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred             ---CHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence               34678899999999999998 899999999988654

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.48  E-value=4.3e-15  Score=111.63  Aligned_cols=97  Identities=11%  Similarity=0.010  Sum_probs=69.2

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCC-CCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKA-IDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .+.|+|||.+....++.++||||+|++++++++|..| +.........   ..+               .... ....+.
T Consensus       191 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~---~~~---------------~~~~-~~~~~~  251 (298)
T 3pls_A          191 PVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT---HFL---------------AQGR-RLPQPE  251 (298)
T ss_dssp             GGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHH---HHH---------------HTTC-CCCCCT
T ss_pred             CccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHH---HHh---------------hcCC-CCCCCc
Confidence            4689999999999999999999999999999995555 4322211111   111               0111 112222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      .....+.+++..||+.+|.+||++.++++.|+.+...
T Consensus       252 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~  288 (298)
T 3pls_A          252 YCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA  288 (298)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            2334678899999999999999999999999988654

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.48  E-value=5.7e-15  Score=112.93  Aligned_cols=108  Identities=7%  Similarity=-0.055  Sum_probs=71.9

Q ss_pred             CCCCCcchhhHhhh-------cCCcccCccCCCeeehhhhhhCCCCCCCCch-----hHH----------HHHHHHHcCC
Q 047377           20 SKRPSMVDIVYALS-------KSDDLLSDISDDALSSSQLISGEKAIDEEGK-----VLW----------AKVEGILEGN   77 (160)
Q Consensus        20 ~~~~~y~aPE~~~~-------~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-----~~~----------~~~~~~~~~~   77 (160)
                      .+++.|+|||.+.+       ..++.++||||||++++|+++|..|+.....     ...          ..+.....  
T Consensus       189 ~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  266 (336)
T 3g2f_A          189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVS--  266 (336)
T ss_dssp             TSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHT--
T ss_pred             CCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhc--
Confidence            35689999999876       4667899999999999999999776541110     000          00000000  


Q ss_pred             ccccccchhhhhccccCCCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccCC
Q 047377           78 EGRKVKRVKEWMDEILLQDS--ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSV  138 (160)
Q Consensus        78 ~~~~~~~~~~~~d~~l~~~~--~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~~  138 (160)
                          .    ....+.+ +..  ........+.+++.+||+.+|.+||++.++++.|+.+....
T Consensus       267 ----~----~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~  320 (336)
T 3g2f_A          267 ----R----EKQRPKF-PEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW  320 (336)
T ss_dssp             ----T----SCCCCCC-CTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred             ----c----cccCCCC-CcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence                0    0001111 111  12245667899999999999999999999999999997643

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.47  E-value=7.7e-15  Score=118.50  Aligned_cols=105  Identities=10%  Similarity=-0.009  Sum_probs=73.1

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..+++.|+|||.+....++.++||||||++++||++|+.||...... ....+....       .......++ .+ ...
T Consensus       173 ~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~-------~~~~~~~~~-~l-~~~  243 (483)
T 3sv0_A          173 LTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS-------EKKVATSIE-AL-CRG  243 (483)
T ss_dssp             CCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHH-------HHHHHSCHH-HH-HTT
T ss_pred             cCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHh-------hccccccHH-HH-hcC
Confidence            34567899999999999999999999999999999999999732211 111111111       000001111 11 122


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ++    ..+..++..||+.+|.+||++.+|++.|+.+..
T Consensus       244 ~p----~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~  278 (483)
T 3sv0_A          244 YP----TEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI  278 (483)
T ss_dssp             SC----HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred             Cc----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence            33    467899999999999999999999999988754

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.47  E-value=6.9e-15  Score=111.63  Aligned_cols=101  Identities=12%  Similarity=0.007  Sum_probs=68.5

Q ss_pred             CCCCcchhhHhhh---------cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhcc
Q 047377           21 KRPSMVDIVYALS---------KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDE   91 (160)
Q Consensus        21 ~~~~y~aPE~~~~---------~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   91 (160)
                      +.+.|+|||.+..         ..++.++||||||++++|+++|+.||..........  ....       .     ..+
T Consensus       196 g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~--~~~~-------~-----~~~  261 (319)
T 2y4i_B          196 GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW--QMGT-------G-----MKP  261 (319)
T ss_dssp             GGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHH--HHHT-------T-----CCC
T ss_pred             CcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--Hhcc-------C-----CCC
Confidence            4478999999874         357889999999999999999999997433211111  1111       0     011


Q ss_pred             ccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccCCC
Q 047377           92 ILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSVS  139 (160)
Q Consensus        92 ~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~~~  139 (160)
                      .+....++    ..+..++..||..+|.+||++.++++.|+.+.....
T Consensus       262 ~~~~~~~~----~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~  305 (319)
T 2y4i_B          262 NLSQIGMG----KEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR  305 (319)
T ss_dssp             CCCCSSCC----TTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred             CCCcCCCC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence            11011222    346789999999999999999999999999976543

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.47  E-value=6.6e-15  Score=111.97  Aligned_cols=96  Identities=10%  Similarity=0.056  Sum_probs=71.0

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.|+|||.+.++.++.++||||+|++++|+++ |..|+..........  ....               ..  ....+.
T Consensus       203 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~--~~~~---------------~~--~~~~~~  263 (322)
T 1p4o_A          203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR--FVME---------------GG--LLDKPD  263 (322)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHH--HHHT---------------TC--CCCCCT
T ss_pred             CCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHH--HHHc---------------CC--cCCCCC
Confidence            467999999999999999999999999999999 888886332211111  1111               11  011222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      .....+..++..||+.+|.+||++.++++.|+++..
T Consensus       264 ~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          264 NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence            233457889999999999999999999999998865

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.47  E-value=7.8e-15  Score=110.46  Aligned_cols=97  Identities=12%  Similarity=0.077  Sum_probs=69.3

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      +.|+|||.+....++.++||||+|++++|+++ +.+|+..........  ....               ..  ....+..
T Consensus       196 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~--~~~~---------------~~--~~~~~~~  256 (298)
T 3f66_A          196 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV--YLLQ---------------GR--RLLQPEY  256 (298)
T ss_dssp             GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHH--HHHT---------------TC--CCCCCTT
T ss_pred             ccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHH--HHhc---------------CC--CCCCCcc
Confidence            57999999999999999999999999999999 556665222111111  1111               00  1111222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccCC
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSV  138 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~~  138 (160)
                      ....+.+++..||+.+|.+||++.++++.|+.+....
T Consensus       257 ~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~  293 (298)
T 3f66_A          257 CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF  293 (298)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            2345788999999999999999999999999987643

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.46  E-value=7.8e-15  Score=120.71  Aligned_cols=94  Identities=15%  Similarity=0.047  Sum_probs=66.8

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .++|.|||||.+.+..|+.++||||+||+++||++|..||..........  ....+     .        ..+ .....
T Consensus       317 ~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~--~i~~~-----~--------~~~-~~~~~  380 (573)
T 3uto_A          317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR--NVKSC-----D--------WNM-DDSAF  380 (573)
T ss_dssp             CSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH--HHHTT-----C--------CCC-CSGGG
T ss_pred             EECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH--HHHhC-----C--------CCC-Ccccc
Confidence            45789999999999999999999999999999999999997443211111  22210     0        011 11111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+||+.||.+||++.|+++
T Consensus       381 ~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          381 SGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            112345678999999999999999999876

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.46  E-value=3.8e-15  Score=113.86  Aligned_cols=110  Identities=12%  Similarity=0.025  Sum_probs=72.3

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccc--cccchhhhhccccCCCCCC
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGR--KVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~l~~~~~~   99 (160)
                      ++.|+|||.+....++.++||||||++++|+++|..|+........    .........  ....+...+.... ....+
T Consensus       211 ~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  285 (326)
T 2w1i_A          211 PIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM----RMIGNDKQGQMIVFHLIELLKNNG-RLPRP  285 (326)
T ss_dssp             CGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHH----HHHCTTCCTHHHHHHHHHHHHTTC-CCCCC
T ss_pred             ceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHH----HhhccccchhhhHHHHHHHhhcCC-CCCCC
Confidence            3469999999998999999999999999999999988752111010    111000000  0001111222211 12233


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ......+..++..||+.+|.+||++.+|++.|+.+..
T Consensus       286 ~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~  322 (326)
T 2w1i_A          286 DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  322 (326)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            3344667889999999999999999999999998754

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.46  E-value=2.3e-14  Score=107.32  Aligned_cols=95  Identities=17%  Similarity=0.145  Sum_probs=65.8

Q ss_pred             CCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCC-CCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           22 RPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGE-KAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        22 ~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ++.|+|||.+.. ..++.++||||||++++|+++|. .|+.........   ....      .       ...+ .... 
T Consensus       180 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~---~~~~------~-------~~~~-~~~~-  241 (289)
T 4fvq_A          180 RIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL---QFYE------D-------RHQL-PAPK-  241 (289)
T ss_dssp             TTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH---HHHH------T-------TCCC-CCCS-
T ss_pred             cCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH---HHhh------c-------cCCC-CCCC-
Confidence            467999999987 67899999999999999999955 444322211111   1111      0       0111 1111 


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                         ...+.+++..||+.+|.+||++.++++.|+.+...
T Consensus       242 ---~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p  276 (289)
T 4fvq_A          242 ---AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP  276 (289)
T ss_dssp             ---SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred             ---CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence               23457899999999999999999999999999663

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.46  E-value=1.6e-14  Score=107.73  Aligned_cols=94  Identities=18%  Similarity=0.135  Sum_probs=70.1

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ..++.|+|||.+....++.++||||||++++|+++|..|+...     ......+              .+..+ ...++
T Consensus       182 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-----~~~~~~~--------------~~~~~-~~~~~  241 (284)
T 2a19_B          182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-----SKFFTDL--------------RDGII-SDIFD  241 (284)
T ss_dssp             CSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-----HHHHHHH--------------HTTCC-CTTSC
T ss_pred             CCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-----HHHHHHh--------------hcccc-cccCC
Confidence            3567899999999889999999999999999999999886411     1101111              11112 22333


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                          ..+..++..||+.+|.+||++.++++.|..+...
T Consensus       242 ----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~  275 (284)
T 2a19_B          242 ----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS  275 (284)
T ss_dssp             ----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred             ----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence                3457889999999999999999999999988654

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.45  E-value=5e-15  Score=110.41  Aligned_cols=95  Identities=17%  Similarity=-0.029  Sum_probs=67.9

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .++.|+|||.+....++.++||||||++++++++|+.||..........  ....               ..  ....+.
T Consensus       178 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~i~~---------------~~--~~~~~~  238 (279)
T 2w5a_A          178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG--KIRE---------------GK--FRRIPY  238 (279)
T ss_dssp             SCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH---------------TC--CCCCCT
T ss_pred             CCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHH--HHhh---------------cc--cccCCc
Confidence            4678999999998899999999999999999999999997433211111  1111               00  011222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      .....+.+++.+||+.+|.+||++.+|++.+...
T Consensus       239 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~  272 (279)
T 2w5a_A          239 RYSDELNEIITRMLNLKDYHRPSVEEILENPLIL  272 (279)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred             ccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence            2234678899999999999999999999866543

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.45  E-value=5.6e-14  Score=108.55  Aligned_cols=44  Identities=14%  Similarity=0.009  Sum_probs=39.4

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG   63 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~   63 (160)
                      .+++.|+|||.+.+..++.++||||+|++++|+++|+.||....
T Consensus       220 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  263 (360)
T 3llt_A          220 INTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHE  263 (360)
T ss_dssp             CSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCc
Confidence            34678999999999999999999999999999999999997433

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.44  E-value=3.6e-14  Score=109.79  Aligned_cols=108  Identities=18%  Similarity=0.123  Sum_probs=70.0

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCch-------hHHHHHHHHHcCCcc---cccc-----
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGK-------VLWAKVEGILEGNEG---RKVK-----   83 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-------~~~~~~~~~~~~~~~---~~~~-----   83 (160)
                      ..+++.|+|||.+.+..++.++||||||++++|+++|+.||.....       .....+...+.....   ....     
T Consensus       195 ~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  274 (373)
T 1q8y_A          195 SIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTF  274 (373)
T ss_dssp             CCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHH
T ss_pred             CCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhh
Confidence            3456889999999999999999999999999999999999973221       111111111110000   0000     


Q ss_pred             ----------------chhhhhccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           84 ----------------RVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        84 ----------------~~~~~~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                                      .....+...   ..++......+.+++.+||+.||.+||++.++++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  333 (373)
T 1q8y_A          275 FNSRGLLRNISKLKFWPLEDVLTEK---YKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN  333 (373)
T ss_dssp             BCC--CBSSCCCCCBCCHHHHHHHT---TCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             cCCcchhcccccccccchhhhhhhc---ccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence                            000111111   2355677788899999999999999999999987

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.44  E-value=1.3e-14  Score=112.17  Aligned_cols=98  Identities=13%  Similarity=0.065  Sum_probs=67.6

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ...++.|+|||.+....++.++||||+|++++||++|..||..........+...+.      ...      ..+ ...+
T Consensus       180 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~------~~~------~~~-~~~~  246 (342)
T 2qr7_A          180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIG------SGK------FSL-SGGY  246 (342)
T ss_dssp             SSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHH------HCC------CCC-CSTT
T ss_pred             cCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHc------cCC------ccc-Cccc
Confidence            345688999999988889999999999999999999999997322111111112221      000      011 1112


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +......+.+++.+|+..||.+||++.++++
T Consensus       247 ~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          247 WNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             TTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            2223346688999999999999999999876

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.44  E-value=3.5e-14  Score=108.58  Aligned_cols=94  Identities=14%  Similarity=0.046  Sum_probs=66.4

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+..+.++.++||||||++++|+++|+.||..........  ....            ...+.+   ..+
T Consensus       202 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~--~~~~------------~~~~~~---~~~  264 (321)
T 2c30_A          202 VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK--RLRD------------SPPPKL---KNS  264 (321)
T ss_dssp             CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--HHHH------------SSCCCC---TTG
T ss_pred             cCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHhc------------CCCCCc---Ccc
Confidence            45678999999999999999999999999999999999996433211111  1111            001111   111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ......+.+++.+||+.+|.+||++.++++.
T Consensus       265 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          265 HKVSPVLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1223456789999999999999999999763

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.44  E-value=1.5e-14  Score=110.84  Aligned_cols=95  Identities=17%  Similarity=0.079  Sum_probs=65.9

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..+++.|+|||.+....++.++||||+|++++++++|..||..........  .....     ....    .... ....
T Consensus       177 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~--~~~~~-----~~~~----~~~~-~~~~  244 (326)
T 2y0a_A          177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA--NVSAV-----NYEF----EDEY-FSNT  244 (326)
T ss_dssp             CCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH--HHHHT-----CCCC----CHHH-HTTS
T ss_pred             ccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH--HHHhc-----CCCc----Cccc-cccC
Confidence            345689999999998899999999999999999999999996433211111  11110     0000    0000 0112


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                          ...+.+++.+||..+|.+||++.++++
T Consensus       245 ----~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          245 ----SALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             ----CHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ----CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                245678999999999999999999986

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.43  E-value=5.1e-14  Score=112.55  Aligned_cols=94  Identities=13%  Similarity=0.005  Sum_probs=66.5

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+....++.++||||+|++++++++|..||..........  ....       ..      ... ..+..
T Consensus       174 ~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~--~i~~-------~~------~~~-~~~~~  237 (444)
T 3soa_A          174 AGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQ--QIKA-------GA------YDF-PSPEW  237 (444)
T ss_dssp             CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHH-------TC------CCC-CTTTT
T ss_pred             cCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHH--HHHh-------CC------CCC-Ccccc
Confidence            45689999999998899999999999999999999999997433211111  1111       00      000 01111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+|++.||.+||++.++++
T Consensus       238 ~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          238 DTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            122345688999999999999999999876

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.43  E-value=3.5e-14  Score=110.82  Aligned_cols=41  Identities=12%  Similarity=0.052  Sum_probs=37.3

Q ss_pred             CCCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCC
Q 047377           20 SKRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAID   60 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~   60 (160)
                      .++|.|+|||.+.+. .++.++||||+||+++||++|+.||.
T Consensus       207 ~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~  248 (361)
T 4f9c_A          207 AGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY  248 (361)
T ss_dssp             CCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred             ccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence            478999999999775 58899999999999999999999996

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.43  E-value=2.8e-14  Score=109.72  Aligned_cols=91  Identities=16%  Similarity=0.103  Sum_probs=66.1

Q ss_pred             CCCCCCcchhhHhhhcCCc-ccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDD-LLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s-~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..+++.|+|||.+.+..++ .++||||+|++++|+++|+.||..........  ....               ...   .
T Consensus       173 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~--~i~~---------------~~~---~  232 (328)
T 3fe3_A          173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRE--RVLR---------------GKY---R  232 (328)
T ss_dssp             TSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH---------------CCC---C
T ss_pred             ccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHH--HHHh---------------CCC---C
Confidence            3456889999999888775 78999999999999999999997443211111  1111               111   1


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .|......+..++.+||..||.+||++.++++
T Consensus       233 ~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          233 IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            22222345678999999999999999999976

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.43  E-value=7.5e-14  Score=108.64  Aligned_cols=107  Identities=16%  Similarity=0.111  Sum_probs=70.3

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCch-------hHHHHHHHHHcCCccc---cccchh---
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGK-------VLWAKVEGILEGNEGR---KVKRVK---   86 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-------~~~~~~~~~~~~~~~~---~~~~~~---   86 (160)
                      .+++.|+|||.+.+..++.++|||||||+++||++|+.||.....       .....+..........   ......   
T Consensus       254 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  333 (397)
T 1wak_A          254 IQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFF  333 (397)
T ss_dssp             CSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTB
T ss_pred             CCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhccccccccc
Confidence            346789999999999999999999999999999999999973221       1111111111100000   000000   


Q ss_pred             ------------------hhhccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           87 ------------------EWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        87 ------------------~~~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                                        +.+..   ....+......+.+++.+||+.||.+||++.++++
T Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          334 TKKGDLKHITKLKPWGLFEVLVE---KYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             CTTSSBSSCCCCCCCCHHHHHHH---TSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             CCccccccccccCCcchhHhhhh---hcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                              00000   11345667778899999999999999999999875

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.43  E-value=2.5e-14  Score=108.57  Aligned_cols=94  Identities=13%  Similarity=0.095  Sum_probs=65.0

Q ss_pred             CCCCCcchhhHhhh-----------cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhh
Q 047377           20 SKRPSMVDIVYALS-----------KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEW   88 (160)
Q Consensus        20 ~~~~~y~aPE~~~~-----------~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (160)
                      .+++.|+|||.+..           ..++.++||||||++++|+++|+.||....... ..+....              
T Consensus       189 ~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~--------------  253 (313)
T 3cek_A          189 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-SKLHAII--------------  253 (313)
T ss_dssp             -CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-HHHHHHH--------------
T ss_pred             CCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH-HHHHHHH--------------
Confidence            35689999999865           478899999999999999999999996322111 1111112              


Q ss_pred             hccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           89 MDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        89 ~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                       ++.. ....+......+..++.+||+.+|.+||++.++++.
T Consensus       254 -~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          254 -DPNH-EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             -CTTS-CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             -hccc-ccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence             2221 112222223467889999999999999999999863

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.43  E-value=1e-13  Score=105.58  Aligned_cols=106  Identities=12%  Similarity=-0.026  Sum_probs=69.2

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHH-HHHHHHcCCccccccch-------------
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWA-KVEGILEGNEGRKVKRV-------------   85 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------------   85 (160)
                      .+++.|+|||.+....++.++||||+|++++|+++|..||......... .+..... ..   ....             
T Consensus       195 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~---p~~~~~~~~~~~~~~~~  270 (339)
T 1z57_A          195 VSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILG-PL---PKHMIQKTRKRKYFHHD  270 (339)
T ss_dssp             CSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHC-SC---CHHHHHHCSCGGGEETT
T ss_pred             cCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC-CC---CHHHHhhccchhHHhhc
Confidence            3457899999999989999999999999999999999999744322111 1111111 00   0000             


Q ss_pred             --------------hhhhccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           86 --------------KEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        86 --------------~~~~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                                    .....+.......+......+.+++.+||+.||.+||++.|+++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          271 RLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             EECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             cccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence                          00000000001122345667889999999999999999999875

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.43  E-value=4.7e-14  Score=105.38  Aligned_cols=94  Identities=13%  Similarity=-0.023  Sum_probs=66.2

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ..++.|+|||.+....++.++||||+|++++++++|..||..........  ....       ..      ... .....
T Consensus       168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~-------~~------~~~-~~~~~  231 (284)
T 3kk8_A          168 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA--QIKA-------GA------YDY-PSPEW  231 (284)
T ss_dssp             CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH-------TC------CCC-CTTTT
T ss_pred             CCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHH--HHHh-------cc------ccC-Cchhh
Confidence            45678999999999999999999999999999999999997433211111  1111       00      000 00111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+..++..|++.+|.+||++.++++
T Consensus       232 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          232 DTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            122345688999999999999999999977

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.42  E-value=1.1e-13  Score=109.25  Aligned_cols=111  Identities=12%  Similarity=0.064  Sum_probs=67.4

Q ss_pred             CCCCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCcccc-----ccchhhhhcc
Q 047377           19 PSKRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRK-----VKRVKEWMDE   91 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~d~   91 (160)
                      ..+++.|||||.+.+. .++.++||||+||+++||++|+.||...... ....+...........     .......+..
T Consensus       222 ~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~  301 (398)
T 4b99_A          222 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQS  301 (398)
T ss_dssp             SCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHS
T ss_pred             ceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhc
Confidence            4567899999998775 5689999999999999999999999754422 2222222221100000     0000000100


Q ss_pred             ccCCCCCCH-----HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           92 ILLQDSISM-----EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        92 ~l~~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .......+.     .....+.+++.+||..||.+|||+.|+++
T Consensus       302 ~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          302 LPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             SCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            000001111     11245678999999999999999999876

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.42  E-value=1.2e-13  Score=105.93  Aligned_cols=106  Identities=11%  Similarity=-0.023  Sum_probs=68.1

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhH-HHHHHHHHcCCccccccch-------------
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVL-WAKVEGILEGNEGRKVKRV-------------   85 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------------   85 (160)
                      .+++.|+|||.+.+..++.++||||+|++++|+++|..||....... ...+...... -   ....             
T Consensus       200 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~---p~~~~~~~~~~~~~~~~  275 (355)
T 2eu9_A          200 VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGP-I---PSHMIHRTRKQKYFYKG  275 (355)
T ss_dssp             CSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC-C---CHHHHHHCSCGGGEETT
T ss_pred             cCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC-C---cHHHhhhccchhhhccc
Confidence            44578999999999999999999999999999999999997433211 1111111110 0   0000             


Q ss_pred             --------------hhhhccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           86 --------------KEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        86 --------------~~~~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                                    .....+..............+.+++.+||+.||.+||++.++++
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          276 GLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL  333 (355)
T ss_dssp             EECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                          00000000000112234557889999999999999999999874

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.42  E-value=1.9e-14  Score=120.02  Aligned_cols=95  Identities=13%  Similarity=0.018  Sum_probs=70.6

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.|+|||.+..+.++.++||||||++++|+++ |..||..........  ....                .. ....+.
T Consensus       555 t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~--~i~~----------------~~-~~~~~~  615 (656)
T 2j0j_A          555 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG--RIEN----------------GE-RLPMPP  615 (656)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH--HHHH----------------TC-CCCCCT
T ss_pred             CcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHH--HHHc----------------CC-CCCCCc
Confidence            367999999999999999999999999999997 999987433211111  1111                00 112223


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      .+...+..++..||+.+|.+||++.+|++.|+.+.
T Consensus       616 ~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          616 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  650 (656)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            33456788999999999999999999999999874

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.42  E-value=5.8e-14  Score=104.83  Aligned_cols=91  Identities=10%  Similarity=0.056  Sum_probs=66.6

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+.+.|+|||.+....++.++||||+|++++++++|..||.........   ..+.              ..   ....+
T Consensus       168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~--------------~~---~~~~~  227 (279)
T 3fdn_A          168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY---KRIS--------------RV---EFTFP  227 (279)
T ss_dssp             CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH---HHHH--------------HT---CCCCC
T ss_pred             CCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHH---HHHH--------------hC---CCCCC
Confidence            4567899999999889999999999999999999999999743321111   1110              00   11122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ......+.+++.+||+.+|.+||++.++++.
T Consensus       228 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          228 DFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             CcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            2223456789999999999999999999873

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.42  E-value=3.2e-14  Score=108.90  Aligned_cols=94  Identities=13%  Similarity=0.035  Sum_probs=67.0

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+....++.++||||+|++++|+++|+.||..........  ....             ..... .....
T Consensus       194 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~--~i~~-------------~~~~~-~~~~~  257 (327)
T 3lm5_A          194 MGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYL--NISQ-------------VNVDY-SEETF  257 (327)
T ss_dssp             CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH-------------TCCCC-CTTTT
T ss_pred             cCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHH--HHHh-------------ccccc-Cchhh
Confidence            45789999999999999999999999999999999999997433211111  1111             00011 11111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++..||+.+|.+||++.++++
T Consensus       258 ~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          258 SSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence            223345688999999999999999999876

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.42  E-value=1.9e-13  Score=104.04  Aligned_cols=115  Identities=10%  Similarity=-0.020  Sum_probs=74.5

Q ss_pred             CCCCcchhhHhh--------hcCCcccCccCCCeeehhhhhhCCCCCCCCc--hhHHHHHHHHHcCCccccccchhhh--
Q 047377           21 KRPSMVDIVYAL--------SKSDDLLSDISDDALSSSQLISGEKAIDEEG--KVLWAKVEGILEGNEGRKVKRVKEW--   88 (160)
Q Consensus        21 ~~~~y~aPE~~~--------~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--   88 (160)
                      +++.|+|||.+.        ...++.++||||||++++|+++|+.||....  ......+...+.+.-......+...  
T Consensus       177 gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  256 (319)
T 4euu_A          177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAEN  256 (319)
T ss_dssp             SCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTT
T ss_pred             cCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccC
Confidence            467999999987        4678999999999999999999999986211  1111111222211000000000000  


Q ss_pred             --h--cccc-CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377           89 --M--DEIL-LQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus        89 --~--d~~l-~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                        +  ...+ .....+......+..++.+||+.||.+||++.|+++...+..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~  308 (319)
T 4euu_A          257 GPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL  308 (319)
T ss_dssp             CCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred             CccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence              0  0011 022445677778899999999999999999999999887653

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.42  E-value=2.2e-14  Score=108.93  Aligned_cols=101  Identities=9%  Similarity=0.023  Sum_probs=67.9

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ...+.|+|||.+..+.++.++||||||++++|+++|+.||........   ...+..     ......    .. ...++
T Consensus       196 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~-----~~~~~~----~~-~~~~~  262 (309)
T 2h34_A          196 VGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVM---GAHINQ-----AIPRPS----TV-RPGIP  262 (309)
T ss_dssp             -CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHH---HHHHHS-----CCCCGG----GT-STTCC
T ss_pred             CCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHH---HHHhcc-----CCCCcc----cc-CCCCC
Confidence            345789999999988999999999999999999999999974332211   122210     000000    11 11222


Q ss_pred             HHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHccccC
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRP-SMVDIVHAVSKSDDS  137 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RP-s~~ev~~~L~~l~~~  137 (160)
                          ..+..++.+||+.+|.+|| ++.++++.|+.....
T Consensus       263 ----~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~  297 (309)
T 2h34_A          263 ----VAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT  297 (309)
T ss_dssp             ----THHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred             ----HHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence                3567899999999999999 999999999987543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.42  E-value=1.9e-14  Score=111.41  Aligned_cols=93  Identities=16%  Similarity=0.122  Sum_probs=66.0

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+....++.++||||+|++++++++|..||..........   ...+     ..    ...+.. ...+ 
T Consensus       194 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~---i~~~-----~~----~~~~~~-~~~~-  259 (351)
T 3c0i_A          194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEG---IIKG-----KY----KMNPRQ-WSHI-  259 (351)
T ss_dssp             CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHH---HHHT-----CC----CCCHHH-HTTS-
T ss_pred             cCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHH---HHcC-----CC----CCCccc-cccC-
Confidence            45688999999999899999999999999999999999997433222111   1110     00    000000 0112 


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                         ...+.+++.+||+.||.+||++.++++
T Consensus       260 ---s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          260 ---SESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             ---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ---CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence               245688999999999999999999975

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.41  E-value=1.1e-14  Score=113.54  Aligned_cols=83  Identities=7%  Similarity=-0.049  Sum_probs=61.5

Q ss_pred             CCcchhhHhhhc-----------CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhcc
Q 047377           23 PSMVDIVYALSK-----------SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDE   91 (160)
Q Consensus        23 ~~y~aPE~~~~~-----------~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   91 (160)
                      +.|+|||.+...           .++.++||||||++++||++|+.||.....                 ......+.. 
T Consensus       266 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~-----------------~~~~~~~~~-  327 (377)
T 3byv_A          266 RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAA-----------------LGGSEWIFR-  327 (377)
T ss_dssp             TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC-----------------------CCSGGGGS-
T ss_pred             cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCccccc-----------------ccchhhhhh-
Confidence            899999999888           899999999999999999999999962110                 111111111 


Q ss_pred             ccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           92 ILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        92 ~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .  ...++    ..+.+++.+||+.||.+||++.++++
T Consensus       328 ~--~~~~~----~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          328 S--CKNIP----QPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             S--CCCCC----HHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             h--ccCCC----HHHHHHHHHHcCCCchhCCCHHHHhh
Confidence            1  12333    45688999999999999999999976

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.41  E-value=1.3e-14  Score=110.44  Aligned_cols=88  Identities=11%  Similarity=0.109  Sum_probs=61.2

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .++++|+|||.+. +.++.++||||||++++|+++|..++....  .+    ..+.      ...    ..+.+ ...+ 
T Consensus       217 ~gt~~y~aPE~~~-~~~~~~~DiwslG~il~el~~g~~~~~~~~--~~----~~~~------~~~----~~~~~-~~~~-  277 (311)
T 3p1a_A          217 EGDPRYMAPELLQ-GSYGTAADVFSLGLTILEVACNMELPHGGE--GW----QQLR------QGY----LPPEF-TAGL-  277 (311)
T ss_dssp             CCCGGGCCGGGGG-TCCSTHHHHHHHHHHHHHHHHTCCCCSSHH--HH----HHHT------TTC----CCHHH-HTTS-
T ss_pred             CCCccccCHhHhc-CCCCchhhHHHHHHHHHHHHhCCCCCCCcc--HH----HHHh------ccC----CCccc-ccCC-
Confidence            3567999999876 479999999999999999999976654211  11    1111      110    01111 1122 


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                         ...+.+++..||+.+|.+||++.++++
T Consensus       278 ---~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          278 ---SSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             ---CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ---CHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence               345688999999999999999999886

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.41  E-value=4.5e-14  Score=109.87  Aligned_cols=94  Identities=14%  Similarity=0.004  Sum_probs=66.0

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+....++.++||||+|++++++++|..||..........  ....+       .      ... .....
T Consensus       191 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~--~i~~~-------~------~~~-~~~~~  254 (362)
T 2bdw_A          191 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA--QIKAG-------A------YDY-PSPEW  254 (362)
T ss_dssp             CSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHT-------C------CCC-CTTGG
T ss_pred             CCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHH--HHHhC-------C------CCC-Ccccc
Confidence            45689999999998899999999999999999999999997433211111  11110       0      000 00000


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+||..||.+||++.++++
T Consensus       255 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          255 DTVTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             GGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            122345688999999999999999999875

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.41  E-value=4.8e-14  Score=109.12  Aligned_cols=95  Identities=14%  Similarity=0.056  Sum_probs=65.4

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+.+..++.++||||||++++|+++|..||.......... .....       ..      ... ..+..
T Consensus       211 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-~~i~~-------~~------~~~-~~~~~  275 (349)
T 2w4o_A          211 CGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF-RRILN-------CE------YYF-ISPWW  275 (349)
T ss_dssp             --CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHH-HHHHT-------TC------CCC-CTTTT
T ss_pred             cCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHH-HHHHh-------CC------Ccc-CCchh
Confidence            45688999999998899999999999999999999999996332211111 11111       00      000 11111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+|+..||.+||++.++++
T Consensus       276 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          276 DEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             hhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            222345688999999999999999999876

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.41  E-value=6.1e-14  Score=105.19  Aligned_cols=93  Identities=15%  Similarity=0.100  Sum_probs=64.3

Q ss_pred             CCCCCcchhhHhhhcC--CcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           20 SKRPSMVDIVYALSKS--DDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~--~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..++.|+|||.+..+.  ++.++||||||++++++++|+.||...............            ....+     .
T Consensus       184 ~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------------~~~~~-----~  246 (295)
T 2clq_A          184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM------------FKVHP-----E  246 (295)
T ss_dssp             CCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHH------------HCCCC-----C
T ss_pred             CCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcc------------ccccc-----c
Confidence            4567899999997754  789999999999999999999998632211111100000            00111     2


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .+......+..++.+||+.+|.+||++.+++.
T Consensus       247 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          247 IPESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             ccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            22233346688999999999999999999875

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.41  E-value=7.1e-14  Score=107.18  Aligned_cols=101  Identities=11%  Similarity=0.010  Sum_probs=67.9

Q ss_pred             CCCCCCcchhhHhhh--cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCC
Q 047377           19 PSKRPSMVDIVYALS--KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~--~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      ..+++.|+|||.+..  +.++.++||||||++++|+++|+.||........  ......+     ..        .. ..
T Consensus       234 ~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~-----~~--------~~-~~  297 (345)
T 3hko_A          234 KAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADT--ISQVLNK-----KL--------CF-EN  297 (345)
T ss_dssp             -CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHC-----CC--------CT-TS
T ss_pred             cCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHH--HHHHHhc-----cc--------cc-CC
Confidence            345678999999875  6788999999999999999999999974332111  1122210     00        00 00


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH--HHHccc
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH--AVSKSD  135 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~--~L~~l~  135 (160)
                      .........+.+++.+||+.+|.+||++.++++  .++...
T Consensus       298 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          298 PNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             GGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred             cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence            000112345688999999999999999999987  344443

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.40  E-value=2.2e-13  Score=106.37  Aligned_cols=44  Identities=14%  Similarity=0.013  Sum_probs=39.4

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG   63 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~   63 (160)
                      .+++.|+|||.+.+..++.++|||||||+++|+++|+.||....
T Consensus       219 ~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  262 (382)
T 2vx3_A          219 IQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN  262 (382)
T ss_dssp             CSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            34578999999999999999999999999999999999997433

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.40  E-value=3.3e-14  Score=107.68  Aligned_cols=106  Identities=8%  Similarity=-0.041  Sum_probs=66.9

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchhh---hhccccC-C
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVKE---WMDEILL-Q   95 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~d~~l~-~   95 (160)
                      .++.|+|||.+..+.++.++||||+|++++|+++|+.||...... ....+........   ......   ....... .
T Consensus       181 gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~  257 (308)
T 3g33_A          181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP---EDDWPRDVSLPRGAFPPR  257 (308)
T ss_dssp             CCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCC---TTTSCSSCSSCGGGSCCC
T ss_pred             ccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC---hhhccchhhccccccCCC
Confidence            367899999999999999999999999999999999999744322 2222222221000   000000   0000000 0


Q ss_pred             CCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSIS-----MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ...+     ......+.+++.+|++.||.+||++.++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          258 GPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             CCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            0000     012345688999999999999999998875

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.40  E-value=4.4e-14  Score=109.39  Aligned_cols=94  Identities=15%  Similarity=0.120  Sum_probs=65.5

Q ss_pred             CCCCCCcchhhHhh---hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           19 PSKRPSMVDIVYAL---SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        19 ~~~~~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      ..+++.|+|||.+.   .+.++.++||||||++++|+++|+.||......  ..+.....+      .      .+.+..
T Consensus       210 ~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~--~~~~~~~~~------~------~~~~~~  275 (348)
T 1u5q_A          210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHIAQN------E------SPALQS  275 (348)
T ss_dssp             CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHS------C------CCCCCC
T ss_pred             ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHhc------C------CCCCCC
Confidence            34568899999985   567899999999999999999999998643321  111122210      0      011101


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ..++    ..+..++..||+.+|.+||++.++++.
T Consensus       276 ~~~~----~~l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          276 GHWS----EYFRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             TTSC----HHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             CCCC----HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            2223    456788999999999999999998763

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.40  E-value=3.6e-14  Score=110.59  Aligned_cols=95  Identities=17%  Similarity=0.063  Sum_probs=66.1

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..+++.|+|||.+....++.++||||+|++++++++|..||..........  ....+     ...    +++.. ...+
T Consensus       178 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~--~i~~~-----~~~----~~~~~-~~~~  245 (361)
T 2yab_A          178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA--NITAV-----SYD----FDEEF-FSQT  245 (361)
T ss_dssp             CCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH--HHHTT-----CCC----CCHHH-HTTS
T ss_pred             CCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHhc-----CCC----CCchh-ccCC
Confidence            346689999999998899999999999999999999999997433211111  11110     000    00000 1112


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                          ...+.+++..|+..||.+||++.++++
T Consensus       246 ----s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          246 ----SELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             ----CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ----CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                245678999999999999999999874

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.39  E-value=5.2e-14  Score=106.26  Aligned_cols=92  Identities=21%  Similarity=0.170  Sum_probs=66.7

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ..++.|+|||.+....++.++||||||++++++++|..|+..........  ....            ...+.+ ...++
T Consensus       180 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~------------~~~~~~-~~~~~  244 (303)
T 3a7i_A          180 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF--LIPK------------NNPPTL-EGNYS  244 (303)
T ss_dssp             CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--HHHH------------SCCCCC-CSSCC
T ss_pred             CCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHH--Hhhc------------CCCCCC-ccccC
Confidence            34578999999999999999999999999999999999987432211111  1110            001122 22333


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                          ..+..++..||+.+|.+||++.++++.
T Consensus       245 ----~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          245 ----KPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             ----HHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             ----HHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence                456889999999999999999999874

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.39  E-value=5.9e-14  Score=110.32  Aligned_cols=94  Identities=13%  Similarity=0.078  Sum_probs=66.6

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ..++.|+|||.+....++.++||||+|++++||++|..||..........  ....       ..      ... .....
T Consensus       211 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~--~i~~-------~~------~~~-~~~~~  274 (387)
T 1kob_A          211 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQ--NVKR-------CD------WEF-DEDAF  274 (387)
T ss_dssp             CSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH--HHHH-------CC------CCC-CSSTT
T ss_pred             ccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHH--HHHh-------CC------CCC-Ccccc
Confidence            35688999999998899999999999999999999999997433211111  1111       00      000 11111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+||..||.+||++.++++
T Consensus       275 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          275 SSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence            122345688999999999999999999986

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.39  E-value=4.8e-14  Score=107.49  Aligned_cols=94  Identities=17%  Similarity=0.072  Sum_probs=65.7

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+..+.++.++||||+|++++++++|..||..........  .....     ...    .++.. ...+ 
T Consensus       179 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~i~~~-----~~~----~~~~~-~~~~-  245 (321)
T 2a2a_A          179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA--NITSV-----SYD----FDEEF-FSHT-  245 (321)
T ss_dssp             CSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH--HHHTT-----CCC----CCHHH-HTTC-
T ss_pred             CCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHH--HHHhc-----ccc----cChhh-hccc-
Confidence            35678999999998999999999999999999999999997433211111  11110     000    00011 1112 


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                         ...+.+++.+|+..+|.+||++.++++
T Consensus       246 ---~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          246 ---SELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             ---CHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             ---CHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence               245688999999999999999999876

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.39  E-value=4.6e-14  Score=105.63  Aligned_cols=93  Identities=15%  Similarity=0.146  Sum_probs=63.3

Q ss_pred             CCCCCcchhhHh----hhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           20 SKRPSMVDIVYA----LSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        20 ~~~~~y~aPE~~----~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      ..++.|+|||.+    ....++.++||||+|++++|+++|+.||....... ..+.....               ... .
T Consensus       170 ~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~---------------~~~-~  232 (290)
T 3fme_A          170 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF-QQLKQVVE---------------EPS-P  232 (290)
T ss_dssp             CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH-HHHHHHHH---------------SCC-C
T ss_pred             CCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH-HHHHHHhc---------------cCC-C
Confidence            456789999996    45678899999999999999999999996322211 11112221               110 0


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ...+......+.+++.+|++.+|.+||++.++++
T Consensus       233 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          233 QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            1111122345688999999999999999999976

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.39  E-value=9.1e-14  Score=104.00  Aligned_cols=90  Identities=11%  Similarity=0.055  Sum_probs=66.2

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ...+.|+|||.+....++.++||||+|++++++++|..||..........  ....               ...   .++
T Consensus       173 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~---------------~~~---~~~  232 (284)
T 2vgo_A          173 CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHR--RIVN---------------VDL---KFP  232 (284)
T ss_dssp             CSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH--HHHT---------------TCC---CCC
T ss_pred             cCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHH--HHhc---------------ccc---CCC
Confidence            45678999999999899999999999999999999999997433211111  1111               111   122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+..++..|++.+|.+||++.++++
T Consensus       233 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          233 PFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence            222345688999999999999999999986

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.38  E-value=5.3e-14  Score=106.05  Aligned_cols=93  Identities=13%  Similarity=0.084  Sum_probs=63.6

Q ss_pred             CCCCCCcchhhHhhhcC---CcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           19 PSKRPSMVDIVYALSKS---DDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~---~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      ...++.|+|||.+....   ++.++||||||++++|+++|+.||..........  ....       ..    ..... .
T Consensus       197 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~-------~~----~~~~~-~  262 (298)
T 2zv2_A          197 TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHS--KIKS-------QA----LEFPD-Q  262 (298)
T ss_dssp             CCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH-------CC----CCCCS-S
T ss_pred             CcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHH--HHhc-------cc----CCCCC-c
Confidence            34568999999987654   3778999999999999999999997433211111  1111       00    00000 1


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ..++    ..+.+++.+||+.||.+||++.++++
T Consensus       263 ~~~~----~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          263 PDIA----EDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             SCCC----HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             cccC----HHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            1222    45688999999999999999999864

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.38  E-value=9.8e-14  Score=110.26  Aligned_cols=43  Identities=12%  Similarity=0.020  Sum_probs=38.9

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCc
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEG   63 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~   63 (160)
                      .++.|+|||.+....++.++|||||||+++||++|..||....
T Consensus       261 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~  303 (429)
T 3kvw_A          261 QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED  303 (429)
T ss_dssp             SCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             CCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence            4578999999999999999999999999999999999997443

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.38  E-value=6.7e-14  Score=107.15  Aligned_cols=95  Identities=13%  Similarity=0.013  Sum_probs=65.1

Q ss_pred             CCCCCCcchhhHhhhcCC-cccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           19 PSKRPSMVDIVYALSKSD-DLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~-s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..+++.|+|||.+....+ +.++||||+|++++++++|+.||.......... .....               ... ...
T Consensus       167 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-~~~~~---------------~~~-~~~  229 (323)
T 3tki_A          167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-SDWKE---------------KKT-YLN  229 (323)
T ss_dssp             CCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH-HHHHT---------------TCT-TST
T ss_pred             CccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH-HHHhc---------------ccc-cCC
Confidence            445788999999987775 788999999999999999999997433211111 01110               000 001


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ........+.+++.+||+.+|.+||++.|+++.
T Consensus       230 ~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          230 PWKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            111223455789999999999999999999763

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.38  E-value=2.7e-14  Score=106.46  Aligned_cols=89  Identities=15%  Similarity=0.144  Sum_probs=47.9

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      .++.|+|||.+....++.++||||+|++++|+++|+.||.......                 ..........   ..+.
T Consensus       174 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----------------~~~~~~~~~~---~~~~  233 (278)
T 3cok_A          174 GTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-----------------TLNKVVLADY---EMPS  233 (278)
T ss_dssp             ------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------------------CCSSCC---CCCT
T ss_pred             CCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-----------------HHHHHhhccc---CCcc
Confidence            4578999999988889999999999999999999999996322100                 0001110111   1122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+.+++.+||+.+|.+||++.++++
T Consensus       234 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          234 FLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            22345688999999999999999998875

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.38  E-value=1.8e-13  Score=107.42  Aligned_cols=118  Identities=10%  Similarity=-0.035  Sum_probs=77.2

Q ss_pred             CCCCCcchhhHhhh--------cCCcccCccCCCeeehhhhhhCCCCCCCCc--hhHHHHHHHHHcCCccccccchhhh-
Q 047377           20 SKRPSMVDIVYALS--------KSDDLLSDISDDALSSSQLISGEKAIDEEG--KVLWAKVEGILEGNEGRKVKRVKEW-   88 (160)
Q Consensus        20 ~~~~~y~aPE~~~~--------~~~s~ksDv~s~Gvvl~elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-   88 (160)
                      .+++.|+|||.+..        +.++.++||||||++++|+++|+.||....  ......+...+.+.-.......... 
T Consensus       176 ~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  255 (396)
T 4eut_A          176 YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAE  255 (396)
T ss_dssp             SSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECST
T ss_pred             cCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheecc
Confidence            45689999999875        678899999999999999999999986211  1111222233321000000000000 


Q ss_pred             -----hcccc-CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377           89 -----MDEIL-LQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus        89 -----~d~~l-~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                           ....+ .....+......+..++..||+.||.+||++.++++.++.+...
T Consensus       256 ~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          256 NGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             TCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             CCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence                 00011 02234467777889999999999999999999999999888663

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.38  E-value=2.5e-14  Score=109.53  Aligned_cols=93  Identities=16%  Similarity=0.099  Sum_probs=65.6

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++|.|+|||.+....++.++||||+|++++++++|..||..........  ....+     ...    .+... ...+  
T Consensus       165 gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~--~i~~~-----~~~----~~~~~-~~~~--  230 (321)
T 1tki_A          165 TAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIE--NIMNA-----EYT----FDEEA-FKEI--  230 (321)
T ss_dssp             SCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH--HHHHT-----CCC----CCHHH-HTTS--
T ss_pred             CChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHH--HHHcC-----CCC----CChhh-hccC--
Confidence            4678999999988889999999999999999999999997433211111  12210     000    00000 0112  


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                        ...+.+++.+|+..||.+||++.++++
T Consensus       231 --s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          231 --SIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             --CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             --CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence              345688999999999999999999987

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.38  E-value=8.3e-14  Score=105.26  Aligned_cols=93  Identities=17%  Similarity=0.063  Sum_probs=65.9

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +++.|+|||.+..+.++.++||||+|++++|+++|..||..........  ....       ..      ... ......
T Consensus       169 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~i~~-------~~------~~~-~~~~~~  232 (304)
T 2jam_A          169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFE--KIKE-------GY------YEF-ESPFWD  232 (304)
T ss_dssp             SCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--HHHH-------CC------CCC-CTTTTT
T ss_pred             CCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHH--HHHc-------CC------CCC-Cccccc
Confidence            4578999999998899999999999999999999999997433211111  1111       00      000 111112


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+.+++..|+..+|.+||++.++++
T Consensus       233 ~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          233 DISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             TSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            22346688999999999999999999986

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.38  E-value=1.1e-13  Score=106.95  Aligned_cols=90  Identities=13%  Similarity=0.088  Sum_probs=65.7

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+..+.++.++|+||+|++++||++|+.||..........  ....               ..+   .+|
T Consensus       166 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~--~i~~---------------~~~---~~p  225 (337)
T 1o6l_A          166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE--LILM---------------EEI---RFP  225 (337)
T ss_dssp             EECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH---------------CCC---CCC
T ss_pred             ccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHH--HHHc---------------CCC---CCC
Confidence            34688999999998899999999999999999999999997433211111  1111               111   122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRP-----SMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~  129 (160)
                      ......+..++.+||+.+|.+||     ++.+|++
T Consensus       226 ~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          226 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence            22334568899999999999999     8888865

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.38  E-value=1.5e-13  Score=109.48  Aligned_cols=91  Identities=14%  Similarity=0.068  Sum_probs=66.6

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..+++.|+|||++..+.++.++||||||++++||++|+.||..........  ....               ..+   .+
T Consensus       309 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~--~i~~---------------~~~---~~  368 (446)
T 4ejn_A          309 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE--LILM---------------EEI---RF  368 (446)
T ss_dssp             SSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH---------------CCC---CC
T ss_pred             ccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHH--HHHh---------------CCC---CC
Confidence            345689999999999999999999999999999999999997433211111  1111               111   12


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRP-----SMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~  129 (160)
                      +......+..++.+||+.||.+||     ++.++++
T Consensus       369 p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          369 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence            222234568899999999999999     9998875

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.38  E-value=1.9e-13  Score=108.74  Aligned_cols=96  Identities=15%  Similarity=0.148  Sum_probs=65.9

Q ss_pred             CCCCCCcchhhHhhh-------cCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhc
Q 047377           19 PSKRPSMVDIVYALS-------KSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMD   90 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~-------~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   90 (160)
                      ..++++|+|||.+..       +.++.++|||||||+++|+++ |+.||....... .   ....+     ...     .
T Consensus       192 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-~---~i~~~-----~~~-----~  257 (434)
T 2rio_A          192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE-S---NIIRG-----IFS-----L  257 (434)
T ss_dssp             ---CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-H---HHHHT-----CCC-----C
T ss_pred             CCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-H---HHhcC-----CCC-----c
Confidence            346789999999975       678999999999999999998 999986322111 1   11110     000     0


Q ss_pred             cccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           91 EILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        91 ~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +.+ ....+......+.+++.+||+.+|.+||++.+|++
T Consensus       258 ~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          258 DEM-KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             CCC-TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ccc-cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            111 11123455677889999999999999999999975

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.38  E-value=6.5e-14  Score=105.31  Aligned_cols=99  Identities=16%  Similarity=0.212  Sum_probs=64.7

Q ss_pred             CCCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchh-hhhccccCCCC
Q 047377           20 SKRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVK-EWMDEILLQDS   97 (160)
Q Consensus        20 ~~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~l~~~~   97 (160)
                      ..++.|+|||.+.. ..++.++||||||++++|+++|+.||..........  ....+    ...... ...++.. ...
T Consensus       187 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~-~~~  259 (303)
T 2vwi_A          187 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM--LTLQN----DPPSLETGVQDKEM-LKK  259 (303)
T ss_dssp             -CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH--HHHTS----SCCCTTC-----CC-CCC
T ss_pred             CCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHH--HHhcc----CCCccccccccchh-hhh
Confidence            45678999999876 568999999999999999999999997332211111  11110    001111 0111111 222


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ++    ..+.+++.+||+.+|.+||++.++++
T Consensus       260 ~~----~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          260 YG----KSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             CC----HHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hh----HHHHHHHHHHccCChhhCcCHHHHhh
Confidence            33    45688999999999999999999876

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.38  E-value=8.2e-14  Score=108.86  Aligned_cols=93  Identities=16%  Similarity=0.069  Sum_probs=66.1

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +++.|+|||.+..+.++.++||||||++++||++|+.||.........  ......     ...    +.... ...++ 
T Consensus       250 gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~--~~i~~~-----~~~----~~~~~-~~~~~-  316 (373)
T 2x4f_A          250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL--NNILAC-----RWD----LEDEE-FQDIS-  316 (373)
T ss_dssp             SSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH--HHHHHT-----CCC----SCSGG-GTTSC-
T ss_pred             CCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHhc-----cCC----CChhh-hccCC-
Confidence            567899999999889999999999999999999999999744321111  122210     000    00011 11222 


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                         ..+.+++.+|++.+|.+||++.++++
T Consensus       317 ---~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          317 ---EEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             ---HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ---HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence               45688999999999999999999986

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.37  E-value=3.9e-14  Score=110.19  Aligned_cols=97  Identities=7%  Similarity=-0.152  Sum_probs=64.1

Q ss_pred             CCCcchhhHhhh--cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           22 RPSMVDIVYALS--KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        22 ~~~y~aPE~~~~--~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ++.|+|||.+..  ..++.++||||||++++||++|+.||........    ..+.      ...........+ .....
T Consensus       254 t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~----~~~~------~~~~~~~~~~~~-~~~~~  322 (371)
T 3q60_A          254 PVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIK----GSWK------RPSLRVPGTDSL-AFGSC  322 (371)
T ss_dssp             CGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCT----TCCC------BCCTTSCCCCSC-CCTTS
T ss_pred             CcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccc----cchh------hhhhhhcccccc-chhhc
Confidence            388999999987  6799999999999999999999999973211000    0000      000000001111 11111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+||+.||.+||++.++++
T Consensus       323 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          323 TPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             SCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             cCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            133456788999999999999999999864

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.37  E-value=4.4e-14  Score=105.46  Aligned_cols=100  Identities=18%  Similarity=0.078  Sum_probs=68.5

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ..++.|+|||.+..+.++.++||||||++++++++|..||..........  .....     ...    ..+.. ...+ 
T Consensus       172 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~-----~~~----~~~~~-~~~~-  238 (283)
T 3bhy_A          172 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT--NISAV-----NYD----FDEEY-FSNT-  238 (283)
T ss_dssp             CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH--HHHTT-----CCC----CCHHH-HTTC-
T ss_pred             CCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHH--HhHhc-----ccC----Ccchh-cccC-
Confidence            35678999999998999999999999999999999999997433211111  11110     000    00000 1112 


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH--HHHccc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH--AVSKSD  135 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~--~L~~l~  135 (160)
                         ...+.+++.+||..+|.+||++.++++  .++.+.
T Consensus       239 ---~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          239 ---SELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             ---CHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             ---CHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence               245688999999999999999999987  455543

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.37  E-value=3.6e-14  Score=109.56  Aligned_cols=91  Identities=12%  Similarity=0.028  Sum_probs=64.4

Q ss_pred             CCCCCCcchhhHhhhcCC-cccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           19 PSKRPSMVDIVYALSKSD-DLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~-s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..+++.|+|||.+.+..+ +.++||||+|++++++++|+.||.....                  ..+...+...  ...
T Consensus       167 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~------------------~~~~~~i~~~--~~~  226 (336)
T 3h4j_B          167 SCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFI------------------PNLFKKVNSC--VYV  226 (336)
T ss_dssp             CTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSS------------------TTCBCCCCSS--CCC
T ss_pred             ccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccH------------------HHHHHHHHcC--CCC
Confidence            345689999999987765 6899999999999999999999963211                  0000001110  011


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .+......+.+++.+|+..||.+||++.|+++
T Consensus       227 ~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          227 MPDFLSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             CCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             CcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            22223345688999999999999999999976

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.37  E-value=6.6e-14  Score=116.61  Aligned_cols=94  Identities=7%  Similarity=-0.007  Sum_probs=64.6

Q ss_pred             CCCCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           19 PSKRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..++|.|||||++..+ .|+.++|+||+||+++||++|..||..........+...+              ....   ..
T Consensus       350 ~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i--------------~~~~---~~  412 (689)
T 3v5w_A          350 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT--------------LTMA---VE  412 (689)
T ss_dssp             CCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHH--------------HHCC---CC
T ss_pred             ccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh--------------cCCC---CC
Confidence            4567999999999754 7999999999999999999999999632211111111111              1111   12


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPS-----MVDIVH  129 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~ev~~  129 (160)
                      +|......+.+++.+|+..||.+|++     +.||..
T Consensus       413 ~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          413 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             CCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence            23333345688999999999999998     566643

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.36  E-value=2.5e-13  Score=101.99  Aligned_cols=110  Identities=12%  Similarity=0.034  Sum_probs=65.7

Q ss_pred             CCCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchhh--hhccccC-
Q 047377           20 SKRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVKE--WMDEILL-   94 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~d~~l~-   94 (160)
                      ..++.|+|||.+... .++.++||||+|++++|+++|+.||...... ....+...........-.....  ..++... 
T Consensus       161 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T 1ob3_A          161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV  240 (288)
T ss_dssp             -CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCC
T ss_pred             cccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccccc
Confidence            346889999998764 5899999999999999999999999743321 1122222221000000000000  0011100 


Q ss_pred             -----CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 -----QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 -----~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                           ...........+.+++.+|++.||.+||++.++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                 00011122345678999999999999999999875

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.36  E-value=1.8e-13  Score=103.87  Aligned_cols=100  Identities=13%  Similarity=0.109  Sum_probs=66.8

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +++.|+|||.+....++.++||||||++++|+++|+.||..........  ....+     ......    .. ...+  
T Consensus       181 gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~--~~~~~-----~~~~~~----~~-~~~~--  246 (311)
T 3ork_A          181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY--QHVRE-----DPIPPS----AR-HEGL--  246 (311)
T ss_dssp             -CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHHC-----CCCCHH----HH-STTC--
T ss_pred             cCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH--HHhcC-----CCCCcc----cc-cCCC--
Confidence            4789999999999999999999999999999999999997443222111  22210     000000    00 1112  


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHH-HHHHHHcccc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVD-IVHAVSKSDD  136 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~e-v~~~L~~l~~  136 (160)
                        ...+..++.+||+.||.+||+..+ +...|..+..
T Consensus       247 --~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~  281 (311)
T 3ork_A          247 --SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN  281 (311)
T ss_dssp             --CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred             --CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence              345688999999999999996554 4455655543

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.36  E-value=1.4e-13  Score=105.34  Aligned_cols=91  Identities=13%  Similarity=0.049  Sum_probs=66.3

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..+++.|+|||.+....++.++|+||+|++++||++|..||.........  .....               ..+   .+
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~--~~i~~---------------~~~---~~  222 (318)
T 1fot_A          163 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTY--EKILN---------------AEL---RF  222 (318)
T ss_dssp             CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH--HHHHH---------------CCC---CC
T ss_pred             ccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH--HHHHh---------------CCC---CC
Confidence            34678999999999999999999999999999999999999743321111  12221               111   12


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRP-----SMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~  129 (160)
                      +......+..++.+|+..+|.+||     ++.+|+.
T Consensus       223 p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          223 PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence            222234568899999999999999     7888864

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.36  E-value=2.3e-13  Score=105.16  Aligned_cols=111  Identities=16%  Similarity=0.088  Sum_probs=67.0

Q ss_pred             CCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCc-------------------
Q 047377           18 DPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNE-------------------   78 (160)
Q Consensus        18 ~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~-------------------   78 (160)
                      ...+++.|+|||.+....++.++||||||++++|+++|+.||.................+.                   
T Consensus       189 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (360)
T 3eqc_A          189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFG  268 (360)
T ss_dssp             --CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------------
T ss_pred             CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccc
Confidence            3456789999999999999999999999999999999999997433221111100000000                   


Q ss_pred             --cccccchhhh----hccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           79 --GRKVKRVKEW----MDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        79 --~~~~~~~~~~----~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                        ........+.    ..... ....+......+.+++.+||+.+|.+||++.++++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          269 MDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             -----CCCHHHHHHHHHHSCC-CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             cCCCCcccchhhhhHHhccCC-CCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence              0000000000    11110 00001112345788999999999999999999976

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.36  E-value=3.8e-14  Score=112.08  Aligned_cols=84  Identities=6%  Similarity=-0.068  Sum_probs=60.4

Q ss_pred             CCCCCcchhhHh----------hhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhh
Q 047377           20 SKRPSMVDIVYA----------LSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWM   89 (160)
Q Consensus        20 ~~~~~y~aPE~~----------~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (160)
                      .+ +.|+|||.+          ....++.++|||||||+++||++|+.||.....                 .......+
T Consensus       269 ~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~-----------------~~~~~~~~  330 (413)
T 3dzo_A          269 IG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAA-----------------LGGSEWIF  330 (413)
T ss_dssp             CC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGG-----------------GSCSGGGG
T ss_pred             CC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcch-----------------hhhHHHHH
Confidence            44 899999999          445688899999999999999999999963211                 11111111


Q ss_pred             ccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 047377           90 DEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIV  128 (160)
Q Consensus        90 d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~  128 (160)
                      ..   ...++    ..+.+++.+||+.+|.+||++.+++
T Consensus       331 ~~---~~~~~----~~~~~li~~~l~~dP~~Rpt~~~~l  362 (413)
T 3dzo_A          331 RS---CKNIP----QPVRALLEGFLRYPKEDRLLPLQAM  362 (413)
T ss_dssp             SS---CCCCC----HHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             hh---cccCC----HHHHHHHHHHccCChhhCcCHHHHH
Confidence            11   11333    4578899999999999999966553

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.36  E-value=1.1e-13  Score=108.17  Aligned_cols=42  Identities=17%  Similarity=0.162  Sum_probs=37.2

Q ss_pred             CCCCCcchhhHhhh--cCCcccCccCCCeeehhhhhhCCCCCCC
Q 047377           20 SKRPSMVDIVYALS--KSDDLLSDISDDALSSSQLISGEKAIDE   61 (160)
Q Consensus        20 ~~~~~y~aPE~~~~--~~~s~ksDv~s~Gvvl~elltg~~p~~~   61 (160)
                      .+++.|+|||.+..  ..++.++||||+||+++||++|+.||..
T Consensus       196 ~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  239 (389)
T 3gni_B          196 VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD  239 (389)
T ss_dssp             TTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence            34567999999987  5789999999999999999999999973

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.36  E-value=5.9e-14  Score=104.50  Aligned_cols=88  Identities=18%  Similarity=0.194  Sum_probs=61.9

Q ss_pred             CCCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..++.|+|||.+... .++.++||||||++++++++|.+++....  ...   ....       ..     .+.+ ...+
T Consensus       191 ~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--~~~---~~~~-------~~-----~~~~-~~~~  252 (289)
T 1x8b_A          191 EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD--QWH---EIRQ-------GR-----LPRI-PQVL  252 (289)
T ss_dssp             CCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH--HHH---HHHT-------TC-----CCCC-SSCC
T ss_pred             CCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh--HHH---HHHc-------CC-----CCCC-Cccc
Confidence            345789999999776 56789999999999999999987764221  111   1111       00     0122 2223


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +    ..+.+++.+||+.+|.+||++.++++
T Consensus       253 ~----~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          253 S----QEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             C----HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             C----HHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            3    45688999999999999999999875

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.36  E-value=4.8e-13  Score=107.37  Aligned_cols=109  Identities=17%  Similarity=0.063  Sum_probs=68.4

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCcccc----ccchhhhhc----
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRK----VKRVKEWMD----   90 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~d----   90 (160)
                      ..++.|+|||.+.+..++.++||||+||+++||++|+.||..... ..+..+...+.....+.    .......++    
T Consensus       224 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~  303 (464)
T 3ttj_A          224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK  303 (464)
T ss_dssp             -CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCC
T ss_pred             cccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccc
Confidence            446789999999999999999999999999999999999974432 12222222221000000    000001111    


Q ss_pred             -----------cccCCCCCC---HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           91 -----------EILLQDSIS---MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        91 -----------~~l~~~~~~---~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                                 ..+ .....   ......+.+++.+||..||.+||++.|+++
T Consensus       304 ~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          304 YAGLTFPKLFPDSL-FPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             CCCCCHHHHSCGGG-SCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cCCCChHHhCcccc-cccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                       000 00000   112456789999999999999999999876

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.36  E-value=2.3e-13  Score=103.04  Aligned_cols=93  Identities=11%  Similarity=0.062  Sum_probs=65.7

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ..++.|+|||.+....++.++||||||++++++++|..||..........  ....       .     ..+..   ..+
T Consensus       186 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~-------~-----~~~~~---~~~  248 (314)
T 3com_A          186 IGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF--MIPT-------N-----PPPTF---RKP  248 (314)
T ss_dssp             CSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--HHHH-------S-----CCCCC---SSG
T ss_pred             CCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH--HHhc-------C-----CCccc---CCc
Confidence            34578999999998899999999999999999999999996433211111  1111       0     00111   111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++..||..+|.+||++.++++
T Consensus       249 ~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          249 ELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             GGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            122345688999999999999999999976

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.35  E-value=1.6e-13  Score=106.65  Aligned_cols=95  Identities=13%  Similarity=0.111  Sum_probs=62.3

Q ss_pred             CCCCCcchhhHhhhcCCccc-CccCCCeeehhhhhhCCCCCCCCch--hHHHHHHHHHcCCccccccchhhhhccccCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLL-SDISDDALSSSQLISGEKAIDEEGK--VLWAKVEGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~k-sDv~s~Gvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      .+++.|+|||.+....++.+ +||||+|++++++++|+.||.....  .....+....               .... ..
T Consensus       178 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~---------------~~~~-~~  241 (361)
T 3uc3_A          178 VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL---------------SVKY-SI  241 (361)
T ss_dssp             ---CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHH---------------TTCC-CC
T ss_pred             cCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHh---------------cCCC-CC
Confidence            45689999999988887665 8999999999999999999973211  1111111111               1111 00


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .........+..++.+||+.+|.+||++.++++.
T Consensus       242 ~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          242 PDDIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             CCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence            1111122456789999999999999999999874

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.35  E-value=4.8e-13  Score=104.12  Aligned_cols=109  Identities=16%  Similarity=0.063  Sum_probs=66.5

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCcccc----cc-----------
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRK----VK-----------   83 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~----~~-----------   83 (160)
                      ..++.|+|||.+....++.++||||+|++++|+++|+.||...... .+..+.........+.    ..           
T Consensus       187 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (371)
T 2xrw_A          187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPK  266 (371)
T ss_dssp             ---CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCC
T ss_pred             eecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCcc
Confidence            4467899999999989999999999999999999999999744321 1111111110000000    00           


Q ss_pred             ----chhhhhccccCCCC---CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           84 ----RVKEWMDEILLQDS---ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        84 ----~~~~~~d~~l~~~~---~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                          .+...+...+ ...   .+......+.+++.+|+..||.+||++.++++
T Consensus       267 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          267 YAGYSFEKLFPDVL-FPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             CCCCCHHHHSCGGG-SCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ccccchhhhccccc-CcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence                0000000000 000   01123556889999999999999999999987

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.35  E-value=1.3e-13  Score=107.20  Aligned_cols=91  Identities=14%  Similarity=0.122  Sum_probs=65.4

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..+++.|+|||.+....++.++|+||+|++++||++|+.||..........  ...               ...+   .+
T Consensus       181 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~--~i~---------------~~~~---~~  240 (353)
T 2i0e_A          181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ--SIM---------------EHNV---AY  240 (353)
T ss_dssp             CCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHH---------------HCCC---CC
T ss_pred             ccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHH--HHH---------------hCCC---CC
Confidence            345789999999999999999999999999999999999997433211111  111               1111   22


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSM-----VDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~-----~ev~~  129 (160)
                      |......+..++.+|+..+|.+||+.     .+|+.
T Consensus       241 p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          241 PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            22333566889999999999999963     55543

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.35  E-value=1e-13  Score=104.04  Aligned_cols=92  Identities=11%  Similarity=0.086  Sum_probs=62.9

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+. +.++.++||||+|++++++++|+.||.........  ...+.      .....    ... .... 
T Consensus       191 ~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~~------~~~~~----~~~-~~~~-  255 (290)
T 1t4h_A          191 IGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI--YRRVT------SGVKP----ASF-DKVA-  255 (290)
T ss_dssp             CSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH--HHHHT------TTCCC----GGG-GGCC-
T ss_pred             cCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH--HHHHh------ccCCc----ccc-CCCC-
Confidence            3568899999775 66999999999999999999999999632211111  11111      00000    011 1111 


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                         ...+..++..||+.+|.+||++.++++
T Consensus       256 ---~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          256 ---IPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ---CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ---CHHHHHHHHHHccCChhhCCCHHHHhh
Confidence               235688999999999999999999875

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.35  E-value=1.4e-13  Score=102.27  Aligned_cols=94  Identities=12%  Similarity=-0.003  Sum_probs=63.8

Q ss_pred             CCCCCCcchhhHhhhcCC-cccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           19 PSKRPSMVDIVYALSKSD-DLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~-s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..+++.|+|||.+....+ +.++||||+|++++|+++|+.||..........  ..+.      .        ... ...
T Consensus       167 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~------~--------~~~-~~~  229 (276)
T 2yex_A          167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY--SDWK------E--------KKT-YLN  229 (276)
T ss_dssp             CCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHH--HHHH------T--------TCT-TST
T ss_pred             CccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHH--HHhh------h--------ccc-ccC
Confidence            345678999999987765 789999999999999999999997433211111  1111      0        000 000


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ........+.+++..|++.+|.+||++.++++
T Consensus       230 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          230 PWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            01112235678999999999999999998876

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.34  E-value=1.7e-13  Score=105.05  Aligned_cols=91  Identities=10%  Similarity=0.029  Sum_probs=65.6

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..+++.|+|||.+....++.++||||+|++++|+++|+.||.........  .....               ..+   ..
T Consensus       181 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~i~~---------------~~~---~~  240 (327)
T 3a62_A          181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI--DKILK---------------CKL---NL  240 (327)
T ss_dssp             TSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH--HHHHH---------------TCC---CC
T ss_pred             cCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHH--HHHHh---------------CCC---CC
Confidence            34578999999999889999999999999999999999999743321111  11121               111   12


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRP-----SMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~  129 (160)
                      +......+.+++.+||..+|.+||     ++.++++
T Consensus       241 p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          241 PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence            222234668899999999999999     6677765

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.34  E-value=2e-13  Score=105.86  Aligned_cols=90  Identities=14%  Similarity=0.052  Sum_probs=65.7

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+....++.++||||+|++++||++|..||..........  ....               ..+   .+|
T Consensus       199 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~--~i~~---------------~~~---~~p  258 (350)
T 1rdq_E          199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVS---------------GKV---RFP  258 (350)
T ss_dssp             EECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH---------------CCC---CCC
T ss_pred             cCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHH--HHHc---------------CCC---CCC
Confidence            34688999999999999999999999999999999999997433211111  1121               111   122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPS-----MVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs-----~~ev~~  129 (160)
                      ......+..++.+||+.+|.+||+     +.+|+.
T Consensus       259 ~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          259 SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence            223346688999999999999998     777764

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.34  E-value=1.1e-13  Score=106.52  Aligned_cols=84  Identities=10%  Similarity=0.055  Sum_probs=63.0

Q ss_pred             CCCCcchhhHhhhcCC-cccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSD-DLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~-s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      +++.|+|||.+....+ +.++||||||++++|+++|..||....        ...           .....+   +..+ 
T Consensus       191 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~-----------~~~~~~---~~~~-  247 (335)
T 3dls_A          191 GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE--------ETV-----------EAAIHP---PYLV-  247 (335)
T ss_dssp             SCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGG--------GGT-----------TTCCCC---SSCC-
T ss_pred             CCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHH--------HHH-----------hhccCC---Cccc-
Confidence            4689999999988876 789999999999999999999996211        000           000000   1122 


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                         ...+..++..||+.+|.+||++.++++.
T Consensus       248 ---~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          248 ---SKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             ---CHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             ---CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence               2456889999999999999999999874

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.34  E-value=2.1e-13  Score=103.70  Aligned_cols=110  Identities=15%  Similarity=0.081  Sum_probs=66.6

Q ss_pred             CCCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCc-hhHHHHHHHHHcCCcccccc---chhhhhccccC
Q 047377           20 SKRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEG-KVLWAKVEGILEGNEGRKVK---RVKEWMDEILL   94 (160)
Q Consensus        20 ~~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~l~   94 (160)
                      ..++.|+|||.+.+ ..++.++||||+|++++|+++|+.||.... ......+...........-.   ....+.+....
T Consensus       180 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (311)
T 3niz_A          180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQ  259 (311)
T ss_dssp             CCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCC
T ss_pred             cccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccc
Confidence            34678999999876 468999999999999999999999997322 22222222333210000000   00000000000


Q ss_pred             -CCCCCH-----HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 -QDSISM-----EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 -~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       ....+.     .....+.+++.+|++.||.+||++.|+++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          260 VFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             CCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             cccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence             000010     12245678999999999999999999876

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.34  E-value=2.4e-13  Score=104.79  Aligned_cols=111  Identities=11%  Similarity=0.044  Sum_probs=69.2

Q ss_pred             CCCCcchhhHhhhcC-CcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchhhhhccccC----
Q 047377           21 KRPSMVDIVYALSKS-DDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVKEWMDEILL----   94 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~-~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~l~----   94 (160)
                      .++.|+|||.+.+.. ++.++||||||++++|+++|+.||...... ....+......    ........+++...    
T Consensus       193 gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~  268 (360)
T 3e3p_A          193 CSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC----PSREVLRKLNPSHTDVDL  268 (360)
T ss_dssp             SCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC----CCHHHHHHHCTTCCCGGG
T ss_pred             CCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCC----CCHHHHHhcccchhhccc
Confidence            357799999987654 899999999999999999999999744321 11222121110    00000000100000    


Q ss_pred             -----------CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHccc
Q 047377           95 -----------QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA--VSKSD  135 (160)
Q Consensus        95 -----------~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~--L~~l~  135 (160)
                                 ....+......+.+++.+||+.||.+||++.++++.  ++.+.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          269 YNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH  322 (360)
T ss_dssp             GCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred             cccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence                       001111234678899999999999999999999863  44443

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.34  E-value=1.4e-13  Score=108.45  Aligned_cols=98  Identities=10%  Similarity=0.043  Sum_probs=64.5

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHH-HHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLW-AKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..++.|+|||++..+.++.++|||||||+++||++|..||........ ..+...+.      ..      .... ....
T Consensus       224 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~------~~------~~~~-~~~~  290 (400)
T 1nxk_A          224 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR------MG------QYEF-PNPE  290 (400)
T ss_dssp             ---CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH------HT------CCCC-CTTT
T ss_pred             CCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH------cC------cccC-CCcc
Confidence            346789999999888999999999999999999999999963221000 00000010      00      0011 1011


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .......+.+++.+||+.||.+||++.+++..
T Consensus       291 ~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          291 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             cccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            11223456889999999999999999999874

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.34  E-value=3.4e-13  Score=108.68  Aligned_cols=91  Identities=18%  Similarity=0.139  Sum_probs=65.5

Q ss_pred             CCCCCCcchhhHhhhcCC-cccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           19 PSKRPSMVDIVYALSKSD-DLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~-s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..+++.|+|||.+.+..+ +.++||||+|++++|+++|+.||..........  ....               ...   .
T Consensus       175 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~--~i~~---------------~~~---~  234 (476)
T 2y94_A          175 SCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFK--KICD---------------GIF---Y  234 (476)
T ss_dssp             CCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHH--HHHT---------------TCC---C
T ss_pred             cCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHH--HHhc---------------CCc---C
Confidence            346789999999987765 689999999999999999999997433211111  1121               111   1


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .+......+.+++.+||..||.+||++.++++
T Consensus       235 ~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          235 TPQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence            11112245688999999999999999999987

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.34  E-value=8.4e-14  Score=104.67  Aligned_cols=91  Identities=14%  Similarity=0.174  Sum_probs=65.8

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ..++.|+|||.+....++.++||||+|++++++++|+.||.......  .......       .      ...+ +..+ 
T Consensus       176 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~-------~------~~~~-~~~~-  238 (294)
T 2rku_A          176 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE--TYLRIKK-------N------EYSI-PKHI-  238 (294)
T ss_dssp             CSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHHT-------T------CCCC-CTTS-
T ss_pred             cCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHhh-------c------cCCC-cccc-
Confidence            34578999999998889999999999999999999999997433211  1111111       0      0111 1222 


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                         ...+..++.+||+.+|.+||++.++++.
T Consensus       239 ---~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          239 ---NPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             ---CHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             ---CHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence               2456789999999999999999999873

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.34  E-value=1.2e-13  Score=107.32  Aligned_cols=90  Identities=14%  Similarity=0.094  Sum_probs=65.2

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+....++.++||||+||+++||++|+.||..........  ....               ..+   .+|
T Consensus       185 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~--~i~~---------------~~~---~~p  244 (353)
T 3txo_A          185 CGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFE--AILN---------------DEV---VYP  244 (353)
T ss_dssp             -CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH---------------CCC---CCC
T ss_pred             CCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHH--HHHc---------------CCC---CCC
Confidence            45789999999999999999999999999999999999997443211111  1221               111   222


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCH------HHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSM------VDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~------~ev~~  129 (160)
                      ......+..++.+|+..+|.+||+.      .++++
T Consensus       245 ~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          245 TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence            2233456889999999999999998      66654

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.34  E-value=5e-13  Score=99.51  Aligned_cols=90  Identities=13%  Similarity=0.024  Sum_probs=63.9

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ...++.|+|||.+. +.++.++||||+|++++|+++|..||..........  ....               ...   ..
T Consensus       168 ~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~--~~~~---------------~~~---~~  226 (277)
T 3f3z_A          168 KVGTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVML--KIRE---------------GTF---TF  226 (277)
T ss_dssp             CCSCTTTCCHHHHT-TCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH---------------CCC---CC
T ss_pred             cCCCCCccChHHhc-ccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHH--HHHh---------------CCC---CC
Confidence            34567899999875 458999999999999999999999997433211111  1111               000   11


Q ss_pred             CH----HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SM----EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +.    .....+..++..|++.+|.+||++.++++
T Consensus       227 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          227 PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            11    12346688999999999999999999875

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.34  E-value=8.5e-14  Score=108.94  Aligned_cols=87  Identities=16%  Similarity=0.056  Sum_probs=63.0

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+....++.++|+||+|++++||++|..||..........  ....               ..+   .++
T Consensus       200 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~--~i~~---------------~~~---~~~  259 (373)
T 2r5t_A          200 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD--NILN---------------KPL---QLK  259 (373)
T ss_dssp             SCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHH--HHHH---------------SCC---CCC
T ss_pred             cCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHH--HHHh---------------ccc---CCC
Confidence            45689999999999999999999999999999999999997433211111  1221               111   112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVD  126 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~e  126 (160)
                      ......+..++.+|++.+|.+||++.+
T Consensus       260 ~~~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          260 PNITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             SSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             CCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence            222345688999999999999999753

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.34  E-value=2.6e-13  Score=102.13  Aligned_cols=94  Identities=14%  Similarity=0.065  Sum_probs=63.9

Q ss_pred             CCCCCCcchhhHhh-----hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhcccc
Q 047377           19 PSKRPSMVDIVYAL-----SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEIL   93 (160)
Q Consensus        19 ~~~~~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l   93 (160)
                      ...++.|+|||.+.     ...++.++||||||++++++++|..|+.........  .....       ..     .+. 
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~~~-------~~-----~~~-  241 (302)
T 2j7t_A          177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL--LKIAK-------SD-----PPT-  241 (302)
T ss_dssp             --CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH--HHHHH-------SC-----CCC-
T ss_pred             ccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH--HHHhc-------cC-----Ccc-
Confidence            34568899999984     567889999999999999999999998743321111  11111       00     000 


Q ss_pred             CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           94 LQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        94 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                        ...+......+..++..||+.+|.+||++.++++
T Consensus       242 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          242 --LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             --CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             --cCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence              0112222345788999999999999999998865

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.34  E-value=4.5e-14  Score=108.59  Aligned_cols=96  Identities=13%  Similarity=0.023  Sum_probs=51.2

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHH-HHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWA-KVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .++.|+|||.+....++.++||||||++++++++|..||......... .....+.            ...... .....
T Consensus       191 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~------------~~~~~~-~~~~~  257 (336)
T 3fhr_A          191 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIR------------LGQYGF-PNPEW  257 (336)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------------------CC-CTTTS
T ss_pred             CCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhh------------cccccc-Cchhh
Confidence            367899999998888999999999999999999999999632211110 0000000            000011 11111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+||+.+|.+||++.++++
T Consensus       258 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          258 SEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             TTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            223346788999999999999999999987

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.34  E-value=3.8e-13  Score=101.35  Aligned_cols=95  Identities=13%  Similarity=0.078  Sum_probs=65.9

Q ss_pred             CCCCCcchhhHhhhcC--CcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           20 SKRPSMVDIVYALSKS--DDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~--~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..++.|+|||.+....  ++.++||||+|++++|+++|+.||.........   ..+.      ..      ...+ ...
T Consensus       172 ~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~i~------~~------~~~~-~~~  235 (305)
T 2wtk_C          172 QGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLF---ENIG------KG------SYAI-PGD  235 (305)
T ss_dssp             CSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHH------HC------CCCC-CSS
T ss_pred             CCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHH---HHHh------cC------CCCC-CCc
Confidence            3567899999987643  377999999999999999999999743321111   1111      00      0111 222


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH--HHHcc
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH--AVSKS  134 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~--~L~~l  134 (160)
                      ++    ..+..++.+||+.||.+||++.++++  .+++.
T Consensus       236 ~~----~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~  270 (305)
T 2wtk_C          236 CG----PPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKK  270 (305)
T ss_dssp             SC----HHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSC
T ss_pred             cC----HHHHHHHHHHccCChhhCCCHHHHhcCcccccC
Confidence            33    45678999999999999999999986  34444

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.33  E-value=2.6e-13  Score=102.75  Aligned_cols=94  Identities=16%  Similarity=0.158  Sum_probs=61.1

Q ss_pred             CCCCCcchhhHhh-----hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccC
Q 047377           20 SKRPSMVDIVYAL-----SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        20 ~~~~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      ..++.|+|||.+.     ...++.++||||||++++|+++|+.||...... ...+.....+      .      .+.+ 
T Consensus       185 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~------~------~~~~-  250 (318)
T 2dyl_A          185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-FEVLTKVLQE------E------PPLL-  250 (318)
T ss_dssp             --CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH-HHHHHHHHHS------C------CCCC-
T ss_pred             CCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc-HHHHHHHhcc------C------CCCC-
Confidence            3567899999984     557889999999999999999999999632211 1111122210      0      0111 


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .  ........+..++..||+.+|.+||++.++++
T Consensus       251 ~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          251 P--GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             C--SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             C--ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            1  00112245678999999999999999999976

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.33  E-value=4.9e-13  Score=101.64  Aligned_cols=108  Identities=10%  Similarity=0.001  Sum_probs=68.3

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchh-------hhhc
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVK-------EWMD   90 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~d   90 (160)
                      ...++.|+|||.+..+.++.++||||||++++|+++|+.||...... ....+........   .....       ....
T Consensus       179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~  255 (326)
T 1blx_A          179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG---EEDWPRDVALPRQAFH  255 (326)
T ss_dssp             CCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC---GGGSCTTCSSCGGGSC
T ss_pred             cccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCC---cccCccccccchhhhc
Confidence            34568899999999999999999999999999999999999744321 2222222211000   00000       0000


Q ss_pred             ccc--CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           91 EIL--LQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        91 ~~l--~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ...  ............+.+++.+||..+|.+||++.+++.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          256 SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             CCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            000  000111122345678999999999999999999985

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.33  E-value=1.9e-13  Score=107.88  Aligned_cols=89  Identities=13%  Similarity=0.114  Sum_probs=62.4

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchh------HHHHHHHHHcCCccccccchhhhhccc
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKV------LWAKVEGILEGNEGRKVKRVKEWMDEI   92 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~d~~   92 (160)
                      ..+++.|+|||.+....++.++|+||+||+++||++|+.||......      ....+..              .+....
T Consensus       213 ~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~--------------~i~~~~  278 (396)
T 4dc2_A          213 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ--------------VILEKQ  278 (396)
T ss_dssp             CCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHH--------------HHHHCC
T ss_pred             ccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHH--------------HHhccc
Confidence            34568899999999999999999999999999999999999622100      0001111              111111


Q ss_pred             cCCCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 047377           93 LLQDSISMEGVMRAMGIAIACLHKDPSKRPSM  124 (160)
Q Consensus        93 l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~  124 (160)
                      +   .+|......+..++.+||+.||.+||+.
T Consensus       279 ~---~~p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          279 I---RIPRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             C---CCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             c---CCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence            1   2333334566889999999999999985

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.33  E-value=2.4e-13  Score=103.01  Aligned_cols=92  Identities=11%  Similarity=-0.023  Sum_probs=63.9

Q ss_pred             CCCCcchhhHhhh-----cCCcccCccCCCeeehhhhhhCCCCCCCCchhH------------HHHHHHHHcCCcccccc
Q 047377           21 KRPSMVDIVYALS-----KSDDLLSDISDDALSSSQLISGEKAIDEEGKVL------------WAKVEGILEGNEGRKVK   83 (160)
Q Consensus        21 ~~~~y~aPE~~~~-----~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~------------~~~~~~~~~~~~~~~~~   83 (160)
                      +++.|+|||.+..     +.++.++||||+|++++|+++|+.||.......            ...+...+         
T Consensus       183 gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i---------  253 (316)
T 2ac3_A          183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESI---------  253 (316)
T ss_dssp             CSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHH---------
T ss_pred             CCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHH---------
Confidence            5688999999875     568899999999999999999999997321100            00001111         


Q ss_pred             chhhhhccccCCCCCCH----HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           84 RVKEWMDEILLQDSISM----EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        84 ~~~~~~d~~l~~~~~~~----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                           .....   ..+.    .....+.+++.+||+.||.+||++.++++
T Consensus       254 -----~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          254 -----QEGKY---EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             -----HHCCC---CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             -----hccCc---ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence                 11111   1221    12345789999999999999999999976

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.33  E-value=8.9e-14  Score=105.68  Aligned_cols=89  Identities=12%  Similarity=0.046  Sum_probs=62.6

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+....++.++||||+|++++|+++|..|+..     .........              ....  ....
T Consensus       237 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~-----~~~~~~~~~--------------~~~~--~~~~  295 (332)
T 3qd2_B          237 VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME-----RVRIITDVR--------------NLKF--PLLF  295 (332)
T ss_dssp             C-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH-----HHHHHHHHH--------------TTCC--CHHH
T ss_pred             CCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH-----HHHHHHHhh--------------ccCC--Cccc
Confidence            467899999999999999999999999999999998776421     001001110              0010  1111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+..++.+||+.+|.+||++.++++
T Consensus       296 ~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          296 TQKYPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             HHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             ccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence            233345688999999999999999999886

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.33  E-value=4.1e-13  Score=102.36  Aligned_cols=102  Identities=9%  Similarity=0.046  Sum_probs=64.9

Q ss_pred             CCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCch--hHHHHHHHHHcCCccccccchhhhhcc------
Q 047377           21 KRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGK--VLWAKVEGILEGNEGRKVKRVKEWMDE------   91 (160)
Q Consensus        21 ~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~------   91 (160)
                      ..+.|+|||.+.. ..++.++||||+|++++|+++|+.||.....  .....+.....      .......++.      
T Consensus       192 ~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~  265 (330)
T 3nsz_A          192 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELD  265 (330)
T ss_dssp             SCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHC------HHHHHHHHHHTTCCCC
T ss_pred             ccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcC------CchhhhHHHHhccccc
Confidence            4567999999977 6789999999999999999999999852221  11111111110      0001011000      


Q ss_pred             -----------------ccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           92 -----------------ILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        92 -----------------~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                                       .. ....+......+.+++.+|++.||.+||++.++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          266 PRFNDILGRHSRKRWERFV-HSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             THHHHHHCCCCCCCGGGGC-CTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             cchhhhhhhccccchhhhc-cccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                             00 01111113456789999999999999999999986

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.33  E-value=2e-13  Score=103.92  Aligned_cols=92  Identities=15%  Similarity=0.135  Sum_probs=62.2

Q ss_pred             CCCCCcchhhHhh-----hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccC
Q 047377           20 SKRPSMVDIVYAL-----SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        20 ~~~~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      .+++.|+|||.+.     ...++.++||||||++++++++|..||..........  ....       .     ..+.+.
T Consensus       190 ~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~-------~-----~~~~~~  255 (326)
T 2x7f_A          190 IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF--LIPR-------N-----PAPRLK  255 (326)
T ss_dssp             -CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--HHHH-------S-----CCCCCS
T ss_pred             cCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH--Hhhc-------C-----ccccCC
Confidence            3467899999987     5678899999999999999999999996433211111  1111       0     001110


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ...++    ..+..++..||..+|.+||++.++++
T Consensus       256 ~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          256 SKKWS----KKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             CSCSC----HHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ccccC----HHHHHHHHHHhccChhhCCCHHHHhh
Confidence            12233    45688999999999999999999976

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.33  E-value=6.3e-13  Score=99.71  Aligned_cols=90  Identities=14%  Similarity=0.127  Sum_probs=62.9

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhcccc--CCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEIL--LQDS   97 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l--~~~~   97 (160)
                      ..++.|+|||.+. +.++.++||||+|++++|+++|+.||..........  ....             ..+..  ....
T Consensus       187 ~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~--~~~~-------------~~~~~~~~~~~  250 (285)
T 3is5_A          187 AGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQ--KATY-------------KEPNYAVECRP  250 (285)
T ss_dssp             CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH-------------CCCCCCC--CC
T ss_pred             ccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHh--hhcc-------------CCcccccccCc
Confidence            3467899999875 678999999999999999999999997433211111  1110             00111  0111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ++    ..+.+++.+||+.+|.+||++.|+++
T Consensus       251 ~~----~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          251 LT----PQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             CC----HHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             CC----HHHHHHHHHHccCChhhCcCHHHHhc
Confidence            22    35678999999999999999999875

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.32  E-value=3.9e-13  Score=104.59  Aligned_cols=95  Identities=14%  Similarity=0.122  Sum_probs=63.8

Q ss_pred             CCCCCCcchhhHhhhc------CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccc
Q 047377           19 PSKRPSMVDIVYALSK------SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEI   92 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~------~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   92 (160)
                      ..+++.|+|||++...      .++.++||||||++++|+++|..||..........  ....+       .. ....+.
T Consensus       259 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~--~i~~~-------~~-~~~~~~  328 (365)
T 2y7j_A          259 LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLR--MIMEG-------QY-QFSSPE  328 (365)
T ss_dssp             CCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHT-------CC-CCCHHH
T ss_pred             CCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHH--HHHhC-------CC-CCCCcc
Confidence            3456889999998643      57889999999999999999999996433211111  11110       00 000000


Q ss_pred             cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           93 LLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        93 l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                        ....    ...+..++.+|++.+|.+||++.++++
T Consensus       329 --~~~~----~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          329 --WDDR----SSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             --HSSS----CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             --cccC----CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence              0111    235688999999999999999999986

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.32  E-value=3.1e-13  Score=113.03  Aligned_cols=91  Identities=14%  Similarity=0.122  Sum_probs=67.1

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..+++.|+|||++....++.++||||||++++||++|+.||..........  ...               ...+   .+
T Consensus       502 ~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~--~i~---------------~~~~---~~  561 (674)
T 3pfq_A          502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ--SIM---------------EHNV---AY  561 (674)
T ss_dssp             CCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHH---------------SSCC---CC
T ss_pred             ccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHH--HHH---------------hCCC---CC
Confidence            345789999999999999999999999999999999999997443211111  222               1111   23


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSM-----VDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~-----~ev~~  129 (160)
                      |......+.+++..||+.+|.+||++     .+|.+
T Consensus       562 p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          562 PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence            33334567889999999999999997     56643

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.32  E-value=7.2e-14  Score=106.63  Aligned_cols=96  Identities=20%  Similarity=0.174  Sum_probs=50.9

Q ss_pred             CCCCCcchhhHh----hhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           20 SKRPSMVDIVYA----LSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        20 ~~~~~y~aPE~~----~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      .+++.|+|||.+    ....++.++||||||++++++++|+.||...... .    ..+.        .......+.+ .
T Consensus       186 ~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~----~~~~--------~~~~~~~~~~-~  251 (327)
T 3aln_A          186 AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-F----DQLT--------QVVKGDPPQL-S  251 (327)
T ss_dssp             --------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------C--------CCCCSCCCCC-C
T ss_pred             CCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-H----HHHH--------HHhcCCCCCC-C
Confidence            355789999998    4567899999999999999999999999632110 0    0010        0000000111 1


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ..........+..++..||+.+|.+||++.++++
T Consensus       252 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          252 NSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            1111122346788999999999999999999965

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.32  E-value=9.4e-13  Score=100.30  Aligned_cols=105  Identities=10%  Similarity=0.051  Sum_probs=66.3

Q ss_pred             CCCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCcccc----------------
Q 047377           20 SKRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRK----------------   81 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~----------------   81 (160)
                      ..++.|+|||.+... .++.++||||+|++++|+++|+.||...... ....+...........                
T Consensus       169 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (317)
T 2pmi_A          169 VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQ  248 (317)
T ss_dssp             CSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCC
T ss_pred             cccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhccccccc
Confidence            346789999998764 6899999999999999999999999744321 2222222221000000                


Q ss_pred             --ccchhhhhccccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           82 --VKRVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        82 --~~~~~~~~d~~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                        ...+...+.+.. ...+    ...+.+++.+||+.||.+||++.++++
T Consensus       249 ~~~~~~~~~~~~~~-~~~~----~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          249 RPPRDLRQVLQPHT-KEPL----DGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             CCCCCSHHHHGGGC-SSCC----CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccchhHHHhhcccc-cccC----CHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence              000001111111 1112    245789999999999999999998876

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.32  E-value=1.2e-13  Score=108.06  Aligned_cols=44  Identities=7%  Similarity=-0.084  Sum_probs=38.6

Q ss_pred             CCCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCc
Q 047377           20 SKRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEG   63 (160)
Q Consensus        20 ~~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~   63 (160)
                      .+++.|+|||.+.+ ..++.++||||+||+++||++|+.||....
T Consensus       191 ~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  235 (388)
T 3oz6_A          191 VATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS  235 (388)
T ss_dssp             CCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            45678999999976 578999999999999999999999997443

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.32  E-value=4.9e-13  Score=101.11  Aligned_cols=107  Identities=15%  Similarity=0.139  Sum_probs=64.0

Q ss_pred             CCCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchhH-HHHHHHHHcCCccccccchh-----hhhc-c
Q 047377           20 SKRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKVL-WAKVEGILEGNEGRKVKRVK-----EWMD-E   91 (160)
Q Consensus        20 ~~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~d-~   91 (160)
                      ..++.|+|||.+.+ ..++.++||||+|++++++++|+.||....... ...+........   .....     .... .
T Consensus       163 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  239 (311)
T 4agu_A          163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLI---PRHQQVFSTNQYFSGV  239 (311)
T ss_dssp             ---GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCC---HHHHHHHHTCGGGTTC
T ss_pred             cCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccc---cccccccccccccccC
Confidence            34578999999976 568999999999999999999999997433211 111111111000   00000     0000 0


Q ss_pred             ccC--CCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           92 ILL--QDSIS-----MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        92 ~l~--~~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .++  ....+     ......+.+++..||+.||.+||++.++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          240 KIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             CCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             cCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            000  00000     012345688999999999999999999986

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.32  E-value=4.9e-14  Score=107.98  Aligned_cols=95  Identities=12%  Similarity=0.032  Sum_probs=52.5

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchh----HHHHHHHHHcCCccccccchhhhhccccC-C
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKV----LWAKVEGILEGNEGRKVKRVKEWMDEILL-Q   95 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~d~~l~-~   95 (160)
                      .++.|+|||.+....++.++||||+|++++|+++|..||......    ....+...+.              ..... .
T Consensus       171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~--------------~~~~~~~  236 (325)
T 3kn6_A          171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIK--------------KGDFSFE  236 (325)
T ss_dssp             -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHT--------------TTCCCCC
T ss_pred             CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHH--------------cCCCCCC
Confidence            367899999999999999999999999999999999999732210    0011111111              11110 0


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .+........+.+++..|++.||.+||++.++++
T Consensus       237 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          237 GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence            0000122456788999999999999999998764

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.32  E-value=5.2e-13  Score=102.85  Aligned_cols=106  Identities=10%  Similarity=0.002  Sum_probs=64.9

Q ss_pred             CCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchhH-HHHHHHHHcCCccccccchhhhhc----ccc-
Q 047377           21 KRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKVL-WAKVEGILEGNEGRKVKRVKEWMD----EIL-   93 (160)
Q Consensus        21 ~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d----~~l-   93 (160)
                      .++.|+|||.+.+ ..++.++||||+|++++|+++|..||....... ...+........   .......-.    ..+ 
T Consensus       190 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~  266 (351)
T 3mi9_A          190 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT---PEVWPNVDNYELYEKLE  266 (351)
T ss_dssp             SCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC---TTTSTTGGGCGGGTSSC
T ss_pred             cccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC---hhhccccccchhhcccc
Confidence            3578999999876 457999999999999999999999997543222 222222221000   000000000    000 


Q ss_pred             -C-CCCCCH-HH------HHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           94 -L-QDSISM-EG------VMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        94 -~-~~~~~~-~~------~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       . ...... ..      ...+.+++.+|++.||.+||++.|+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          267 LVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             CCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence             0 000000 11      234678999999999999999998877

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.32  E-value=2.4e-13  Score=104.33  Aligned_cols=90  Identities=14%  Similarity=0.171  Sum_probs=65.4

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      ..++.|+|||.+....++.++||||||++++|+++|+.||.........  .....       .      ...+ ...++
T Consensus       202 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~-------~------~~~~-~~~~~  265 (335)
T 2owb_A          202 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--LRIKK-------N------EYSI-PKHIN  265 (335)
T ss_dssp             CSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH--HHHHH-------T------CCCC-CTTSC
T ss_pred             CCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHH--HHHhc-------C------CCCC-CccCC
Confidence            3457899999999889999999999999999999999999743321111  11111       0      0111 22222


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                          ..+..++.+||+.||.+||++.++++
T Consensus       266 ----~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          266 ----PVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             ----HHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence                45678999999999999999999986

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.32  E-value=1.3e-13  Score=106.76  Aligned_cols=90  Identities=12%  Similarity=0.056  Sum_probs=64.8

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..+++.|+|||.+.+..++.++|+||+|++++||++|..||..........  ....               ..   ..+
T Consensus       178 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~--~i~~---------------~~---~~~  237 (345)
T 1xjd_A          178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH--SIRM---------------DN---PFY  237 (345)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH---------------CC---CCC
T ss_pred             CCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHH--HHHh---------------CC---CCC
Confidence            345689999999999999999999999999999999999997433211111  1111               01   112


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMV-DIV  128 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~-ev~  128 (160)
                      +......+..++.+||..+|.+||++. +|.
T Consensus       238 p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          238 PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence            222234568899999999999999986 553

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.32  E-value=2.8e-13  Score=100.75  Aligned_cols=90  Identities=17%  Similarity=0.066  Sum_probs=60.4

Q ss_pred             CCCCcchhhHhhhcCC-cccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSD-DLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~-s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .++.|+|||.+....+ +.++||||+|++++++++|+.||........   ...+.      .        ..   ...+
T Consensus       172 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~------~--------~~---~~~~  231 (276)
T 2h6d_A          172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL---FKKIR------G--------GV---FYIP  231 (276)
T ss_dssp             -----CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHH------H--------CC---CCCC
T ss_pred             CCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH---HHHhh------c--------Cc---ccCc
Confidence            4578999999887765 6899999999999999999999974332111   11111      0        00   0111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ......+..++.+|++.+|.+||++.++++.
T Consensus       232 ~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          232 EYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            2223456889999999999999999999873

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.31  E-value=1e-12  Score=101.30  Aligned_cols=110  Identities=5%  Similarity=-0.033  Sum_probs=66.7

Q ss_pred             CCCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCcccccc---chhhhhccccC
Q 047377           20 SKRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVK---RVKEWMDEILL   94 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~d~~l~   94 (160)
                      ..++.|+|||.+.+. .++.++||||+|++++|+++|..||...... ....+.........+.-.   ...+.+.... 
T Consensus       173 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-  251 (346)
T 1ua2_A          173 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKS-  251 (346)
T ss_dssp             CCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCC-
T ss_pred             cccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccc-
Confidence            346789999998764 4889999999999999999999998744321 112222222100000000   0000000000 


Q ss_pred             CCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           95 QDSIS-----MEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        95 ~~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ....+     ......+.+++.+|+..||.+||++.|+++.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          252 FPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             CCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             cCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            00111     1123567889999999999999999999873

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.31  E-value=6.5e-13  Score=107.11  Aligned_cols=93  Identities=11%  Similarity=0.013  Sum_probs=64.0

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+. +.++.++||||+||+++++++|..||..........  ....       ... ....+.  ...+ 
T Consensus       199 ~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~--~i~~-------~~~-~~~~~~--~~~~-  264 (494)
T 3lij_A          199 LGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILR--KVEK-------GKY-TFDSPE--WKNV-  264 (494)
T ss_dssp             CSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH-------TCC-CCCSGG--GTTS-
T ss_pred             CCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHh-------CCC-CCCchh--cccC-
Confidence            4568999999875 679999999999999999999999997433211111  1111       000 000000  1122 


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                         ...+.+++.+||+.+|.+||++.++++
T Consensus       265 ---s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          265 ---SEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             ---CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ---CHHHHHHHHHHCCCChhhCccHHHHhc
Confidence               245678999999999999999999875

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.31  E-value=8.4e-13  Score=99.15  Aligned_cols=109  Identities=7%  Similarity=-0.048  Sum_probs=64.3

Q ss_pred             CCCCcchhhHhhhcC-CcccCccCCCeeehhhhhhCCCCCC-CCc-hhHHHHHHHHHcCCccccccchhhhhccc----c
Q 047377           21 KRPSMVDIVYALSKS-DDLLSDISDDALSSSQLISGEKAID-EEG-KVLWAKVEGILEGNEGRKVKRVKEWMDEI----L   93 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~-~s~ksDv~s~Gvvl~elltg~~p~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----l   93 (160)
                      .++.|+|||.+.+.. ++.++||||+|++++|+++|..|+. ... ......+...........-.......+..    .
T Consensus       163 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (292)
T 3o0g_A          163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY  242 (292)
T ss_dssp             SCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCC
T ss_pred             cccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccc
Confidence            357899999998766 7999999999999999998887754 222 11222222222110000000000000000    0


Q ss_pred             ----CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           94 ----LQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        94 ----~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                          ............+.+++.+|++.||.+||++.|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          243 PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence                000111123345678999999999999999999875

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.31  E-value=4.5e-13  Score=102.21  Aligned_cols=84  Identities=12%  Similarity=0.188  Sum_probs=62.7

Q ss_pred             CCCCCcchhhHhhhcCC-cccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSKSD-DLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~-s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+++.|+|||.+....+ +.++||||||++++|+++|+.||....        ....      ..       ... ...+
T Consensus       209 ~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--------~~~~------~~-------~~~-~~~~  266 (320)
T 3a99_A          209 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--------EIIR------GQ-------VFF-RQRV  266 (320)
T ss_dssp             CSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------HHHH------CC-------CCC-SSCC
T ss_pred             CCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh--------hhhc------cc-------ccc-cccC
Confidence            45678999999987776 688999999999999999999986211        1111      00       011 2223


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +    ..+..++.+||+.+|.+||++.+|++
T Consensus       267 ~----~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          267 S----SECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             C----HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             C----HHHHHHHHHHccCChhhCcCHHHHhc
Confidence            3    45688999999999999999999976

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.31  E-value=2.6e-13  Score=104.94  Aligned_cols=88  Identities=14%  Similarity=0.149  Sum_probs=61.8

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchh------HHHHHHHHHcCCccccccchhhhhcccc
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKV------LWAKVEGILEGNEGRKVKRVKEWMDEIL   93 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~d~~l   93 (160)
                      .+++.|+|||.+....++.++|+||+|++++||++|+.||......      ....+...              +....+
T Consensus       171 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~--------------i~~~~~  236 (345)
T 3a8x_A          171 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV--------------ILEKQI  236 (345)
T ss_dssp             CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHH--------------HHHCCC
T ss_pred             CCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHH--------------HHcCCC
Confidence            4568999999999999999999999999999999999999631110      00111111              111111


Q ss_pred             CCCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 047377           94 LQDSISMEGVMRAMGIAIACLHKDPSKRPSM  124 (160)
Q Consensus        94 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~  124 (160)
                         .+|......+..++.+||+.+|.+||+.
T Consensus       237 ---~~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          237 ---RIPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             ---CCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             ---CCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence               2233333466889999999999999985

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.30  E-value=6.1e-13  Score=107.00  Aligned_cols=94  Identities=13%  Similarity=-0.004  Sum_probs=64.6

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+. +.++.++||||+|++++++++|..||..........  ....+       ..      .. ..+..
T Consensus       184 ~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~--~i~~~-------~~------~~-~~~~~  246 (486)
T 3mwu_A          184 IGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK--RVETG-------KY------AF-DLPQW  246 (486)
T ss_dssp             TTGGGGCCGGGGG-SCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHT-------CC------CS-CSGGG
T ss_pred             cCCCCCCCHHHhC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHhC-------CC------CC-CCccc
Confidence            3568899999875 569999999999999999999999997433211111  11110       00      00 00111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ......+.+++.+||+.+|.+||++.++++.
T Consensus       247 ~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          247 RTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            1223456889999999999999999999873

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.30  E-value=4.5e-13  Score=105.28  Aligned_cols=94  Identities=11%  Similarity=0.077  Sum_probs=64.1

Q ss_pred             CCCCCCcchhhHhhh---cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           19 PSKRPSMVDIVYALS---KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~---~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      ..+++.|+|||.+..   ..++.++||||+||+++||++|+.||..........+...+.              ..   .
T Consensus       174 ~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~--------------~~---~  236 (384)
T 4fr4_A          174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE--------------TT---V  236 (384)
T ss_dssp             CCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHH--------------HC---C
T ss_pred             cCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHh--------------hc---c
Confidence            445688999999864   358899999999999999999999996322111111111111              01   1


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCC-HHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPS-MVDIVH  129 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs-~~ev~~  129 (160)
                      ..++......+..++..||+.+|.+||+ +.+|..
T Consensus       237 ~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          237 VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            1233333456788999999999999998 666643

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.30  E-value=6.2e-13  Score=101.82  Aligned_cols=105  Identities=13%  Similarity=0.036  Sum_probs=64.3

Q ss_pred             CCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhH-HHHHHHHHcCCccccccchhh------hhc--
Q 047377           21 KRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVL-WAKVEGILEGNEGRKVKRVKE------WMD--   90 (160)
Q Consensus        21 ~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~------~~d--   90 (160)
                      .++.|+|||.+... .++.++||||+|++++|+++|..||....... ...+........   ......      +..  
T Consensus       199 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  275 (329)
T 3gbz_A          199 ITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPD---DTTWPGVTALPDWKQSF  275 (329)
T ss_dssp             -CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC---TTTSTTGGGSTTCCTTC
T ss_pred             CCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCc---hhhhhhhhhhhhhhhhh
Confidence            36789999999875 48999999999999999999999997443211 111111111000   000000      000  


Q ss_pred             cccCCCCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           91 EILLQDSI-----SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        91 ~~l~~~~~-----~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +.. ....     +......+.+++.+||+.||.+||++.|+++
T Consensus       276 ~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          276 PKF-RGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             CCC-CCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhh-ccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            000 0000     0002245688999999999999999999875

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.30  E-value=6.3e-13  Score=105.29  Aligned_cols=105  Identities=10%  Similarity=0.084  Sum_probs=66.4

Q ss_pred             CCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhhcc-------
Q 047377           21 KRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWMDE-------   91 (160)
Q Consensus        21 ~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~-------   91 (160)
                      .++.|+|||.+.+. .++.++|||||||+++||++|+.||..... .....+...+....   ...+.. +.+       
T Consensus       218 ~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~---~~~~~~-~~~~~~~~~~  293 (420)
T 1j1b_A          218 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT---REQIRE-MNPNYTEFKF  293 (420)
T ss_dssp             SCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCC---HHHHHH-HCSCCCCCCC
T ss_pred             eCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC---HHHHHh-hChhhhhhcc
Confidence            35789999999765 789999999999999999999999974432 12222222221000   000000 011       


Q ss_pred             -ccCCCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           92 -ILLQDS----ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        92 -~l~~~~----~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       .+....    ++......+.+++.+||..||.+||++.|++.
T Consensus       294 p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          294 PQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             CCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence             100000    11122356789999999999999999999975

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.30  E-value=3.5e-13  Score=108.22  Aligned_cols=92  Identities=14%  Similarity=0.010  Sum_probs=64.0

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +++.|+|||.+. +.++.++||||+|++++++++|..||..........  ....       ...      .. ..+...
T Consensus       190 gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~--~i~~-------~~~------~~-~~~~~~  252 (484)
T 3nyv_A          190 GTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILK--KVEK-------GKY------TF-ELPQWK  252 (484)
T ss_dssp             TGGGTCCHHHHH-TCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH-------CCC------CC-CSGGGG
T ss_pred             CCccccCceeec-CCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHH--HHHc-------CCC------CC-CCcccc
Confidence            468899999885 479999999999999999999999997433211111  1111       000      00 001111


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+.+++.+||+.+|.+||++.++++
T Consensus       253 ~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          253 KVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             GSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence            22345688999999999999999999986

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.30  E-value=5.7e-13  Score=100.07  Aligned_cols=94  Identities=12%  Similarity=0.041  Sum_probs=64.2

Q ss_pred             CCCCCcchhhHhh------hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhcccc
Q 047377           20 SKRPSMVDIVYAL------SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEIL   93 (160)
Q Consensus        20 ~~~~~y~aPE~~~------~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l   93 (160)
                      ..++.|+|||.+.      ...++.++||||+|++++++++|..||..........  ....       ..      ...
T Consensus       184 ~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~--~~~~-------~~------~~~  248 (298)
T 1phk_A          184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR--MIMS-------GN------YQF  248 (298)
T ss_dssp             CSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH-------TC------CCC
T ss_pred             cCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHH--HHhc-------CC------ccc
Confidence            4567899999985      3467899999999999999999999996433211111  1111       00      000


Q ss_pred             CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           94 LQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        94 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       ...........+..++.+||+.+|.+||++.++++
T Consensus       249 -~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          249 -GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             -CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             -CcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence             00111122346788999999999999999999875

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.29  E-value=6.1e-13  Score=105.91  Aligned_cols=94  Identities=15%  Similarity=0.039  Sum_probs=63.0

Q ss_pred             CCCCCCcchhhHhh---hcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccC
Q 047377           19 PSKRPSMVDIVYAL---SKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        19 ~~~~~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      ..+++.|+|||.+.   ...++.++||||+||+++|+++ |..||.........   ....      .        ....
T Consensus       186 ~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~---~~~~------~--------~~~~  248 (432)
T 3p23_A          186 VPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN---ILLG------A--------CSLD  248 (432)
T ss_dssp             CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH---HHTT------C--------CCCT
T ss_pred             cCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH---HHhc------c--------CCcc
Confidence            34678999999987   4567889999999999999999 89998632211111   1110      0        0000


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ....+......+.+++.+||+.||.+||++.+|++
T Consensus       249 ~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          249 CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            00111233445678999999999999999999983

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.29  E-value=1.8e-12  Score=100.47  Aligned_cols=110  Identities=11%  Similarity=0.072  Sum_probs=66.2

Q ss_pred             CCCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCc-hhHHHHHHHHHcCCcccc-----ccchhhhhccc
Q 047377           20 SKRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEG-KVLWAKVEGILEGNEGRK-----VKRVKEWMDEI   92 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~d~~   92 (160)
                      .+++.|+|||.+..+ .++.++||||+|++++|+++|+.||.... ......+.........+.     ...........
T Consensus       192 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (364)
T 3qyz_A          192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL  271 (364)
T ss_dssp             CSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTS
T ss_pred             ccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhc
Confidence            456889999987655 48999999999999999999999997433 222222222221000000     00000000000


Q ss_pred             cCCCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           93 LLQDSIS-----MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        93 l~~~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+     ......+.+++.+|++.||.+||++.++++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          272 PHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             CCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            0000111     112345789999999999999999999986

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.29  E-value=6.3e-13  Score=101.67  Aligned_cols=110  Identities=15%  Similarity=0.113  Sum_probs=66.6

Q ss_pred             CCCCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhH-HHHHHHHHcCCccc------cccchhhhhc
Q 047377           19 PSKRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVL-WAKVEGILEGNEGR------KVKRVKEWMD   90 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~d   90 (160)
                      ...++.|+|||.+... .++.++||||+|++++++++|+.||....... ...+..........      ..........
T Consensus       184 ~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (331)
T 4aaa_A          184 EVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRL  263 (331)
T ss_dssp             CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCC
T ss_pred             CcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccC
Confidence            3456789999999775 68999999999999999999999997443211 11111111000000      0000000000


Q ss_pred             cccCCCCCCH-----HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           91 EILLQDSISM-----EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        91 ~~l~~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +.+ ....+.     .....+.+++.+||+.||.+||++.|+++
T Consensus       264 ~~~-~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          264 PEI-KEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             CCC-SSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ccc-cccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            111 001111     22356789999999999999999998875

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.29  E-value=8.9e-13  Score=103.66  Aligned_cols=41  Identities=12%  Similarity=-0.091  Sum_probs=36.3

Q ss_pred             CCCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCC
Q 047377           20 SKRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAID   60 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~   60 (160)
                      ..++.|+|||.+.+. .++.++||||+||+++||++|+.||.
T Consensus       196 ~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~  237 (405)
T 3rgf_A          196 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH  237 (405)
T ss_dssp             -CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             eecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCC
Confidence            346789999999874 58999999999999999999999996

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.28  E-value=3.6e-13  Score=102.91  Aligned_cols=111  Identities=8%  Similarity=-0.106  Sum_probs=68.3

Q ss_pred             CCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchhhhhc--------
Q 047377           21 KRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVKEWMD--------   90 (160)
Q Consensus        21 ~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d--------   90 (160)
                      .++.|+|||.+.+ ..++.++||||+|++++|+++|+.||...... ....+........   .........        
T Consensus       162 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~~~  238 (324)
T 3mtl_A          162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPT---EETWPGILSNEEFKTYN  238 (324)
T ss_dssp             -CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC---TTTSTTGGGCHHHHHTC
T ss_pred             CcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC---hHhchhhhcchhhcccc
Confidence            3678999999876 56899999999999999999999999744321 2222222221100   000000000        


Q ss_pred             -cccCCCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH--HHHccc
Q 047377           91 -EILLQDS----ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH--AVSKSD  135 (160)
Q Consensus        91 -~~l~~~~----~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~--~L~~l~  135 (160)
                       +.. ...    ........+.+++.+|++.||.+||++.|+++  .+..+.
T Consensus       239 ~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  289 (324)
T 3mtl_A          239 YPKY-RAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLG  289 (324)
T ss_dssp             CCCC-CCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred             cccc-cchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcc
Confidence             000 000    00012245678999999999999999999977  444443

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.28  E-value=2.8e-12  Score=99.76  Aligned_cols=110  Identities=11%  Similarity=0.059  Sum_probs=66.4

Q ss_pred             CCCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccc-----cccchhhhhccc
Q 047377           20 SKRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGR-----KVKRVKEWMDEI   92 (160)
Q Consensus        20 ~~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~d~~   92 (160)
                      ..++.|+|||.+.. ..++.++||||+|++++++++|+.||...... ....+.........+     ........+...
T Consensus       202 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (371)
T 4exu_A          202 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSL  281 (371)
T ss_dssp             TCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHS
T ss_pred             ccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhcc
Confidence            34688999999987 67899999999999999999999999743321 111111111100000     000000000000


Q ss_pred             --cCCCC---CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           93 --LLQDS---ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        93 --l~~~~---~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                        .....   ........+.+++.+|++.||.+||++.++++
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          282 PQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             CCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence              00000   00112356789999999999999999999976

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.28  E-value=8.6e-13  Score=99.90  Aligned_cols=84  Identities=17%  Similarity=0.233  Sum_probs=62.3

Q ss_pred             CCCCCcchhhHhhhcCCc-ccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDD-LLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s-~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+++.|+|||.+....+. .++||||+|++++|+++|+.||....        ....               ...   ..
T Consensus       199 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~---------------~~~---~~  252 (312)
T 2iwi_A          199 DGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ--------EILE---------------AEL---HF  252 (312)
T ss_dssp             CSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------HHHH---------------TCC---CC
T ss_pred             CCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH--------HHhh---------------hcc---CC
Confidence            346789999999877764 58999999999999999999986211        1111               011   11


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +......+..++.+||+.+|.+||++.++++
T Consensus       253 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          253 PAHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1222345688999999999999999999986

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.28  E-value=7e-13  Score=102.72  Aligned_cols=94  Identities=16%  Similarity=0.119  Sum_probs=63.3

Q ss_pred             CCCCCcchhhHhhhc--CCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhhccccCCC
Q 047377           20 SKRPSMVDIVYALSK--SDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~--~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      .+++.|+|||.+..+  .++.++||||||++++|+++|+.||..... .....+...+              ...   ..
T Consensus       221 ~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~--------------~~~---~~  283 (355)
T 1vzo_A          221 CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI--------------LKS---EP  283 (355)
T ss_dssp             GSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHH--------------HHC---CC
T ss_pred             ccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHH--------------hcc---CC
Confidence            457899999999853  478899999999999999999999963221 0111111111              001   11


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRP-----SMVDIVHA  130 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~~  130 (160)
                      .++......+.+++.+||..||.+||     ++.++++.
T Consensus       284 ~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          284 PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            22223334568899999999999999     88888764

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.27  E-value=5.3e-13  Score=105.70  Aligned_cols=93  Identities=12%  Similarity=0.060  Sum_probs=61.0

Q ss_pred             CCCCCcchhhHhh---hcCCcccCccCCCeeehhhhhhCCCCCCCCch--hHHHHHHHHHcCCccccccchhhhhccccC
Q 047377           20 SKRPSMVDIVYAL---SKSDDLLSDISDDALSSSQLISGEKAIDEEGK--VLWAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        20 ~~~~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      .+++.|+|||++.   ...++.++||||||++++++++|..||.....  .+..    .+.      .... .. .+.. 
T Consensus       302 ~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~----~i~------~~~~-~~-~~~~-  368 (419)
T 3i6u_A          302 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD----QIT------SGKY-NF-IPEV-  368 (419)
T ss_dssp             ---CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHH----HHH------TTCC-CC-CHHH-
T ss_pred             CCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHH----HHh------cCCC-CC-Cchh-
Confidence            3468999999985   36788999999999999999999999963221  1111    111      0000 00 0000 


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ...    ....+.+++.+||+.+|.+||++.++++
T Consensus       369 ~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          369 WAE----VSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             HTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             hcc----cCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            011    2345688999999999999999999876

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.27  E-value=8.9e-13  Score=103.57  Aligned_cols=106  Identities=12%  Similarity=0.131  Sum_probs=66.1

Q ss_pred             CCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchh----hhhccccC-
Q 047377           22 RPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVK----EWMDEILL-   94 (160)
Q Consensus        22 ~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~d~~l~-   94 (160)
                      ++.|+|||.+.+. .++.++||||+||+++|+++|+.||...... ....+...+....   ...+.    ...+..++ 
T Consensus       204 t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~---~~~~~~~~~~~~~~~~~~  280 (394)
T 4e7w_A          204 SRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPS---REQIKTMNPNYMEHKFPQ  280 (394)
T ss_dssp             CGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC---HHHHHHHCGGGSSSCCCC
T ss_pred             CcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC---HHHHHhhChhhhhhcccc
Confidence            4679999998765 5899999999999999999999999744321 1222222221000   00000    00000100 


Q ss_pred             CCC------CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           95 QDS------ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        95 ~~~------~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ...      ++......+.+++.+||+.||.+||++.+++..
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          281 IRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             CCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             ccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence            000      111123467899999999999999999999863

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.27  E-value=6.8e-13  Score=103.62  Aligned_cols=103  Identities=13%  Similarity=0.039  Sum_probs=65.8

Q ss_pred             CCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhh--hcc-----
Q 047377           21 KRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEW--MDE-----   91 (160)
Q Consensus        21 ~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~d~-----   91 (160)
                      .++.|+|||.+.+. .++.++||||+|++++|+++|+.||..... .....+......      .....+  .++     
T Consensus       203 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~------p~~~~~~~~~~~~~~~  276 (383)
T 3eb0_A          203 CSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGT------PTKEQMIRMNPHYTEV  276 (383)
T ss_dssp             CCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC------CCHHHHHHHCTTC--C
T ss_pred             cCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC------CCHHHHHHhCcccccc
Confidence            34679999998765 489999999999999999999999974332 122222222210      000000  000     


Q ss_pred             ---ccCCC----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           92 ---ILLQD----SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        92 ---~l~~~----~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                         .+...    ..+......+.+++.+||+.+|.+||++.|+++
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          277 RFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             CCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             cCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence               00000    011123345789999999999999999999974

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.27  E-value=8.3e-13  Score=100.58  Aligned_cols=92  Identities=14%  Similarity=0.093  Sum_probs=62.3

Q ss_pred             CCCCcchhhHhh---hcCCcccCccCCCeeehhhhhhCCCCCCCCch--hHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           21 KRPSMVDIVYAL---SKSDDLLSDISDDALSSSQLISGEKAIDEEGK--VLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        21 ~~~~y~aPE~~~---~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      +++.|+|||.+.   ...++.++||||||++++++++|..||.....  .+...   ...+     ....    .+.. .
T Consensus       178 gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~-----~~~~----~~~~-~  244 (322)
T 2ycf_A          178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ---ITSG-----KYNF----IPEV-W  244 (322)
T ss_dssp             SCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHH---HHHT-----CCCC----CHHH-H
T ss_pred             CCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHH---HHhC-----cccc----Cchh-h
Confidence            467899999974   45788999999999999999999999963221  11111   0100     0000    0000 1


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ..+    ...+.+++.+||+.||.+||++.++++
T Consensus       245 ~~~----~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          245 AEV----SEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             TTS----CHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hhc----CHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            112    345688999999999999999999874

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.26  E-value=7.1e-13  Score=107.11  Aligned_cols=94  Identities=13%  Similarity=-0.013  Sum_probs=64.5

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..+++.|+|||.+. +.++.++||||+|++++++++|..||..........  ....       ....  .+... ...+
T Consensus       208 ~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~--~i~~-------~~~~--~~~~~-~~~~  274 (504)
T 3q5i_A          208 RLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIK--KVEK-------GKYY--FDFND-WKNI  274 (504)
T ss_dssp             CCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH-------CCCC--CCHHH-HTTS
T ss_pred             ccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHc-------CCCC--CCccc-cCCC
Confidence            34668999999876 679999999999999999999999997433211111  1111       0000  00000 0112


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                          ...+.+++..|+..+|.+||++.++++
T Consensus       275 ----s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          275 ----SDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             ----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ----CHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence                245688999999999999999999976

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.25  E-value=6.7e-13  Score=108.56  Aligned_cols=88  Identities=15%  Similarity=0.181  Sum_probs=62.4

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+++.|+|||.+.+..++.++|+||+||+++||++|+.||...... ....+...+              .....   .+
T Consensus       350 ~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i--------------~~~~~---~~  412 (543)
T 3c4z_A          350 AGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV--------------LEQAV---TY  412 (543)
T ss_dssp             CSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHH--------------HHCCC---CC
T ss_pred             cCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHH--------------hhccc---CC
Confidence            5678999999999989999999999999999999999999733210 011111111              11111   22


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSM  124 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~  124 (160)
                      +......+..++.+||+.+|.+||++
T Consensus       413 p~~~s~~~~~li~~lL~~dP~~R~~~  438 (543)
T 3c4z_A          413 PDKFSPASKDFCEALLQKDPEKRLGF  438 (543)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred             CcccCHHHHHHHHHhccCCHhHCCCC
Confidence            23333566889999999999999975

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.25  E-value=5.6e-12  Score=98.11  Aligned_cols=109  Identities=13%  Similarity=0.048  Sum_probs=66.4

Q ss_pred             CCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCcccc-----ccchhhhhc--c
Q 047377           21 KRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRK-----VKRVKEWMD--E   91 (160)
Q Consensus        21 ~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~d--~   91 (160)
                      .++.|+|||.+.+ ..++.++||||+||+++|+++|+.||..... .....+.........+.     .......+.  +
T Consensus       187 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  266 (367)
T 1cm8_A          187 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLP  266 (367)
T ss_dssp             SCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSC
T ss_pred             CCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCC
Confidence            4578999999887 6799999999999999999999999974432 11122212111000000     000000000  0


Q ss_pred             ccCC---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           92 ILLQ---DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        92 ~l~~---~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ....   ..........+.+++.+|+..||.+||++.++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          267 ELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             CCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence            0000   0011122345688999999999999999999987

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.25  E-value=1.4e-12  Score=100.22  Aligned_cols=110  Identities=11%  Similarity=0.059  Sum_probs=66.0

Q ss_pred             CCCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCcccc------ccchhhhhcc
Q 047377           20 SKRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRK------VKRVKEWMDE   91 (160)
Q Consensus        20 ~~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~d~   91 (160)
                      .+++.|+|||.+.. ..++.++||||+|++++|+++|+.||...... ....+...........      .....+.+..
T Consensus       183 ~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
T 2b9h_A          183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKS  262 (353)
T ss_dssp             CCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHT
T ss_pred             cccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhc
Confidence            34678999998765 67899999999999999999999999744321 1111111111000000      0000011100


Q ss_pred             ccCCCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           92 ILLQDSIS-----MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        92 ~l~~~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .......+     ......+.+++.+||+.||.+||++.++++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          263 LPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             SCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            00000000     122345688999999999999999999987

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.25  E-value=1.1e-12  Score=98.38  Aligned_cols=90  Identities=14%  Similarity=0.035  Sum_probs=61.8

Q ss_pred             CCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHHH
Q 047377           23 PSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEG  102 (160)
Q Consensus        23 ~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~  102 (160)
                      +.|+|||.+. +.++.++||||+|++++++++|..||..........  ....       ....  .+... ...+    
T Consensus       187 ~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~--~~~~-------~~~~--~~~~~-~~~~----  249 (287)
T 2wei_A          187 AYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK--RVET-------GKYA--FDLPQ-WRTI----  249 (287)
T ss_dssp             HTTCCHHHHT-TCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH-------CCCC--CCSGG-GTTS----
T ss_pred             ccccChHHhc-CCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHH--HHHc-------CCCC--CCchh-hhhc----
Confidence            5799999875 458999999999999999999999997433211111  1111       0000  00000 1122    


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          103 VMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       103 ~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ...+..++..|+..+|.+||++.++++
T Consensus       250 ~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          250 SDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            245688999999999999999999987

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.24  E-value=1e-12  Score=100.83  Aligned_cols=109  Identities=7%  Similarity=-0.027  Sum_probs=65.0

Q ss_pred             CCCCCCcchhhHhhhc-CCcc-cCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccC--
Q 047377           19 PSKRPSMVDIVYALSK-SDDL-LSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILL--   94 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~-~~s~-ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~--   94 (160)
                      ...++.|+|||.+..+ .++. ++||||||++++|+++|..||.......  .....+..+.............+...  
T Consensus       210 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~  287 (348)
T 2pml_X          210 SRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV--ELFNNIRTKNIEYPLDRNHFLYPLTNKK  287 (348)
T ss_dssp             SCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH--HHHHHHTSCCCCCCCSSSSSTTTTCC--
T ss_pred             CCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH--HHHHHHhccCcCCccchhhhhccccccc
Confidence            4456789999999877 6666 9999999999999999999997432211  11112211000000000000000000  


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ...........+..++..||+.+|.+||++.++++
T Consensus       288 ~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          288 STCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             ------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             cccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            00000223356788999999999999999999876

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.24  E-value=3.6e-12  Score=98.25  Aligned_cols=110  Identities=11%  Similarity=0.030  Sum_probs=66.8

Q ss_pred             CCCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccc-----cccchhhhhc--
Q 047377           20 SKRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGR-----KVKRVKEWMD--   90 (160)
Q Consensus        20 ~~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~d--   90 (160)
                      ..++.|+|||.+.. ..++.++||||+|++++|+++|+.||...... ....+.........+     ........+.  
T Consensus       184 ~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (353)
T 3coi_A          184 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSL  263 (353)
T ss_dssp             CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTS
T ss_pred             ccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhC
Confidence            34678999999877 67899999999999999999999999743321 111111111000000     0000000000  


Q ss_pred             -ccc--CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           91 -EIL--LQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        91 -~~l--~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       ...  ............+.+++.+|+..||.+||++.+++.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          264 PQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             CBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             cCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence             000  000111233456788999999999999999999976

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.24  E-value=2.5e-12  Score=100.18  Aligned_cols=110  Identities=9%  Similarity=0.045  Sum_probs=66.6

Q ss_pred             CCCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCcccc-----ccchhhhhccc
Q 047377           20 SKRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRK-----VKRVKEWMDEI   92 (160)
Q Consensus        20 ~~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~d~~   92 (160)
                      ..++.|+|||.+.+ ..++.++||||+|++++||++|+.||..... .....+...+.....+.     ......++...
T Consensus       190 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~  269 (367)
T 2fst_X          190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL  269 (367)
T ss_dssp             -CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTS
T ss_pred             CcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhcc
Confidence            34678999999887 6789999999999999999999999974432 12222222221000000     00000111100


Q ss_pred             cCCCCCCH-----HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           93 LLQDSISM-----EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        93 l~~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.     .....+.+++.+|+..||.+||++.+++.
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          270 TQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             CCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence            00001111     11245688999999999999999999876

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.24  E-value=1.9e-12  Score=99.95  Aligned_cols=110  Identities=9%  Similarity=0.063  Sum_probs=65.4

Q ss_pred             CCCCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccc-----cccchhhhhccc
Q 047377           20 SKRPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGR-----KVKRVKEWMDEI   92 (160)
Q Consensus        20 ~~~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~d~~   92 (160)
                      ..++.|+|||.+.. ..++.++||||+|++++++++|+.||...... ....+.........+     ........+...
T Consensus       194 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (362)
T 3pg1_A          194 VTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNS  273 (362)
T ss_dssp             --CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTC
T ss_pred             cccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhh
Confidence            34567999999877 67899999999999999999999999743321 111211211100000     000001111111


Q ss_pred             cC--CCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           93 LL--QDS----ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        93 l~--~~~----~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +.  ...    ........+.+++.+|++.+|.+||++.++++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          274 LSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             CCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence            00  000    00112345788999999999999999999986

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.23  E-value=7e-13  Score=105.01  Aligned_cols=96  Identities=13%  Similarity=0.047  Sum_probs=65.4

Q ss_pred             CCCCCCCcchhhHhhhcC----CcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhcccc
Q 047377           18 DPSKRPSMVDIVYALSKS----DDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEIL   93 (160)
Q Consensus        18 ~~~~~~~y~aPE~~~~~~----~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l   93 (160)
                      ...+++.|+|||.+....    ++.++|||||||+++||++|+.||..........  ....      ..     .....
T Consensus       228 ~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~--~i~~------~~-----~~~~~  294 (410)
T 3v8s_A          228 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS--KIMN------HK-----NSLTF  294 (410)
T ss_dssp             SCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH--HHHT------HH-----HHCCC
T ss_pred             CCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHH--HHHh------cc-----ccccC
Confidence            345678999999998665    7899999999999999999999997443211111  1111      00     00011


Q ss_pred             CCCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHH
Q 047377           94 LQDSISMEGVMRAMGIAIACLHKDPSK--RPSMVDIVH  129 (160)
Q Consensus        94 ~~~~~~~~~~~~~~~l~~~C~~~~p~~--RPs~~ev~~  129 (160)
                         +........+..++.+|+..+|.+  ||++.+|++
T Consensus       295 ---p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          295 ---PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             ---CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             ---CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence               100112245678889999988988  999999976

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.23  E-value=4.4e-12  Score=95.82  Aligned_cols=108  Identities=7%  Similarity=-0.005  Sum_probs=64.5

Q ss_pred             CCCcchhhHhhh-cCCcccCccCCCeeehhhhhhCCCCCCCCchhH-HHHHHHHHcCCcccccc----chhhhhccccCC
Q 047377           22 RPSMVDIVYALS-KSDDLLSDISDDALSSSQLISGEKAIDEEGKVL-WAKVEGILEGNEGRKVK----RVKEWMDEILLQ   95 (160)
Q Consensus        22 ~~~y~aPE~~~~-~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~d~~l~~   95 (160)
                      ++.|+|||.+.. +.++.++||||||++++|+++|+.||....... ...+.........+...    .+...+......
T Consensus       187 ~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (320)
T 2i6l_A          187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTE  266 (320)
T ss_dssp             CCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTS
T ss_pred             cccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccC
Confidence            567999998876 678999999999999999999999997433211 11111111000000000    000000000000


Q ss_pred             CCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSIS-----MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ...+     ......+.+++.+||+.||.+||++.++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          267 PHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             CCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             CCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence            0001     112356789999999999999999999976

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.22  E-value=2.2e-12  Score=96.71  Aligned_cols=91  Identities=11%  Similarity=0.038  Sum_probs=59.9

Q ss_pred             CCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .++.|+|||.+... .++.++||||+|++++|+++   |+....  ........+.      .      ....+ +..++
T Consensus       192 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~--~~~~~~~~~~------~------~~~~~-~~~~~  253 (303)
T 1zy4_A          192 GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM--ERVNILKKLR------S------VSIEF-PPDFD  253 (303)
T ss_dssp             --CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH--HHHHHHHHHH------S------TTCCC-CTTCC
T ss_pred             CcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch--hHHHHHHhcc------c------ccccc-Ccccc
Confidence            45789999998754 68999999999999999998   443111  0011111111      0      01112 22333


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+..++.+||+.||.+||++.++++
T Consensus       254 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          254 DNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             TTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence            344456788999999999999999999986

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.22  E-value=1e-12  Score=108.07  Aligned_cols=94  Identities=15%  Similarity=0.118  Sum_probs=66.2

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..+++.|+|||.+..+.++.++||||+||+++||++|..||...... ....+...+.              ..   ...
T Consensus       345 ~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~--------------~~---~~~  407 (576)
T 2acx_A          345 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK--------------EV---PEE  407 (576)
T ss_dssp             CCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHH--------------HC---CCC
T ss_pred             cCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhh--------------cc---ccc
Confidence            35578999999999889999999999999999999999999743210 1111111111              00   112


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRP-----SMVDIVH  129 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~  129 (160)
                      ++......+..++.+|+..||.+||     ++.+|++
T Consensus       408 ~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          408 YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence            2222335668899999999999999     6777764

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.21  E-value=6.1e-12  Score=97.49  Aligned_cols=95  Identities=8%  Similarity=-0.041  Sum_probs=67.9

Q ss_pred             CCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           18 DPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        18 ~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ...+++.|+|||++.+..++.++||||||++++||++|+.||.....                  .  ...+...+  ..
T Consensus       244 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~------------------~--~~~~~~~~--~~  301 (365)
T 3e7e_A          244 AKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEG------------------G--ECKPEGLF--RR  301 (365)
T ss_dssp             CSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEET------------------T--EEEECSCC--TT
T ss_pred             eecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCC------------------C--ceeechhc--cc
Confidence            34467899999999999999999999999999999999999852110                  0  00011111  11


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCC-CCHHHHHHHHHcccc
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKR-PSMVDIVHAVSKSDD  136 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~R-Ps~~ev~~~L~~l~~  136 (160)
                      ++.  ...+.++...|++.+|.+| |++.++.+.|++...
T Consensus       302 ~~~--~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~  339 (365)
T 3e7e_A          302 LPH--LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ  339 (365)
T ss_dssp             CSS--HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred             cCc--HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence            111  2345677788999999998 578888888887754

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.19  E-value=1.1e-11  Score=98.95  Aligned_cols=34  Identities=9%  Similarity=-0.096  Sum_probs=30.0

Q ss_pred             CCCCcchhhHhh-hcCCcccCccCCCeeehhhhhh
Q 047377           21 KRPSMVDIVYAL-SKSDDLLSDISDDALSSSQLIS   54 (160)
Q Consensus        21 ~~~~y~aPE~~~-~~~~s~ksDv~s~Gvvl~ellt   54 (160)
                      .++.|+|||.+. ...++.++||||+||+++||++
T Consensus       245 gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt  279 (458)
T 3rp9_A          245 VTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN  279 (458)
T ss_dssp             CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred             ccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence            367899999874 5569999999999999999998

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.17  E-value=1.5e-12  Score=103.91  Aligned_cols=96  Identities=11%  Similarity=0.048  Sum_probs=63.4

Q ss_pred             CCCCCCcchhhHhh-----hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhcccc
Q 047377           19 PSKRPSMVDIVYAL-----SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEIL   93 (160)
Q Consensus        19 ~~~~~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l   93 (160)
                      ..+++.|+|||++.     .+.++.++|||||||+++||++|+.||..........  ..+.      ..  ....-|..
T Consensus       236 ~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~--~i~~------~~--~~~~~p~~  305 (437)
T 4aw2_A          236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG--KIMN------HK--ERFQFPTQ  305 (437)
T ss_dssp             CCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH--HHHT------HH--HHCCCCSS
T ss_pred             ccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHH--hhhh------cc--ccccCCcc
Confidence            35678999999987     4578999999999999999999999997443211111  1111      00  00000111


Q ss_pred             CCCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHH
Q 047377           94 LQDSISMEGVMRAMGIAIACLHKDPSK--RPSMVDIVH  129 (160)
Q Consensus        94 ~~~~~~~~~~~~~~~l~~~C~~~~p~~--RPs~~ev~~  129 (160)
                       ....+    ..+.+++.+|+..+|++  ||++.++++
T Consensus       306 -~~~~s----~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          306 -VTDVS----ENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             -CCCSC----HHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             -cccCC----HHHHHHHHHHhcccccccCCCCHHHHhC
Confidence             11122    35578888888777777  999999876

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.14  E-value=6.6e-12  Score=99.45  Aligned_cols=95  Identities=14%  Similarity=0.014  Sum_probs=62.1

Q ss_pred             CCCCCCcchhhHhhh-------cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhcc
Q 047377           19 PSKRPSMVDIVYALS-------KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDE   91 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~-------~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   91 (160)
                      ..+++.|+|||.+..       +.++.++|+|||||+++||++|+.||..........  ....      ..   ..  .
T Consensus       223 ~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~--~i~~------~~---~~--~  289 (412)
T 2vd5_A          223 AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYG--KIVH------YK---EH--L  289 (412)
T ss_dssp             CCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH--HHHT------HH---HH--C
T ss_pred             eccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHH--HHHh------cc---cC--c
Confidence            356789999999873       568999999999999999999999997443211111  1111      00   00  0


Q ss_pred             ccCCCCCCHHHHHHHHHHHHHccccCCCCC---CCHHHHHH
Q 047377           92 ILLQDSISMEGVMRAMGIAIACLHKDPSKR---PSMVDIVH  129 (160)
Q Consensus        92 ~l~~~~~~~~~~~~~~~l~~~C~~~~p~~R---Ps~~ev~~  129 (160)
                      .+  ...+......+.+++.+|+. +|.+|   |++.+|+.
T Consensus       290 ~~--p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          290 SL--PLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             CC--C----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             CC--CccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            01  01111223456889999998 89988   58888865

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.11  E-value=5.2e-11  Score=94.50  Aligned_cols=41  Identities=10%  Similarity=-0.108  Sum_probs=33.3

Q ss_pred             CCCCCCcchhhHhh-hcCCcccCccCCCeeehhhhhhCCCCC
Q 047377           19 PSKRPSMVDIVYAL-SKSDDLLSDISDDALSSSQLISGEKAI   59 (160)
Q Consensus        19 ~~~~~~y~aPE~~~-~~~~s~ksDv~s~Gvvl~elltg~~p~   59 (160)
                      ...++.|+|||.+. ...++.++||||+||+++||++|..|+
T Consensus       211 ~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~  252 (432)
T 3n9x_A          211 HVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH  252 (432)
T ss_dssp             CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred             CCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence            34467899999864 556999999999999999999854443

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.02  E-value=3.6e-11  Score=100.40  Aligned_cols=114  Identities=10%  Similarity=-0.056  Sum_probs=67.0

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhh------hcccc
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEW------MDEIL   93 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~l   93 (160)
                      .+++.|+|||.+.++.++.++||||||++++|+++|..||....... .+ ...+.... .........      ....+
T Consensus       184 ~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~-~~-~~~i~~~~-~~~~~~~~~l~g~~~~~~~l  260 (676)
T 3qa8_A          184 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV-QW-HGKVREKS-NEHIVVYDDLTGAVKFSSVL  260 (676)
T ss_dssp             CSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHH-HS-STTCC-------CCSCCCCSSSCCCCSSS
T ss_pred             cCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchh-hh-hhhhhccc-chhhhhhhhhcccccccccc
Confidence            44578999999998999999999999999999999999996432110 00 00000000 000000000      00011


Q ss_pred             -CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHH-----HHHHHHcccc
Q 047377           94 -LQDSISMEGVMRAMGIAIACLHKDPSKRPSMVD-----IVHAVSKSDD  136 (160)
Q Consensus        94 -~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~e-----v~~~L~~l~~  136 (160)
                       .+..........+.+++..|+..||.+||++.+     ....++.+..
T Consensus       261 p~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~  309 (676)
T 3qa8_A          261 PTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS  309 (676)
T ss_dssp             CCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred             CCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence             012233455677899999999999999999866     3444544443

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=98.99  E-value=6.3e-11  Score=99.04  Aligned_cols=88  Identities=10%  Similarity=0.059  Sum_probs=62.1

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..++++|+|||++..+. +.++||||||++++++++|..|+...           .       .        ..+ ....
T Consensus       237 ~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~-----------~-------~--------~~~-~~~~  288 (681)
T 2pzi_A          237 LYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGR-----------Y-------V--------DGL-PEDD  288 (681)
T ss_dssp             CCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTE-----------E-------C--------SSC-CTTC
T ss_pred             cCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccc-----------c-------c--------ccc-cccc
Confidence            34678999999987654 89999999999999999998887510           0       0        001 0011


Q ss_pred             C-HHHHHHHHHHHHHccccCCCCCCC-HHHHHHHHHcc
Q 047377           99 S-MEGVMRAMGIAIACLHKDPSKRPS-MVDIVHAVSKS  134 (160)
Q Consensus        99 ~-~~~~~~~~~l~~~C~~~~p~~RPs-~~ev~~~L~~l  134 (160)
                      + ......+..++.+||+.+|.+||+ +.++...|..+
T Consensus       289 ~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          289 PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence            1 122345788999999999999995 66666666554

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=98.98  E-value=5.6e-11  Score=89.49  Aligned_cols=88  Identities=14%  Similarity=0.092  Sum_probs=56.6

Q ss_pred             CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccC-CCCCCHHHHHHHHHHHHHc
Q 047377           35 SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILL-QDSISMEGVMRAMGIAIAC  113 (160)
Q Consensus        35 ~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~-~~~~~~~~~~~~~~l~~~C  113 (160)
                      .++.++||||||++++|+++|+.||.......      .+        ......+..... ...........+..++.+|
T Consensus       178 ~~~~~~Di~slG~il~elltg~~Pf~~~~~~~------~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  243 (286)
T 3uqc_A          178 DANPQDDIRGIGASLYALLVNRWPLPEAGVRS------GL--------APAERDTAGQPIEPADIDRDIPFQISAVAARS  243 (286)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCC------CS--------EECCBCTTSCBCCHHHHCTTSCHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHCCCCCCcCCcch------hh--------HHHHHHhccCCCChhhcccCCCHHHHHHHHHH
Confidence            36789999999999999999999997322100      00        000000000000 0001112234578999999


Q ss_pred             cccCCCCCCCHHHHHHHHHccccC
Q 047377          114 LHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       114 ~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      |+.||.+| ++.++++.|+.+...
T Consensus       244 l~~dP~~R-s~~el~~~L~~~~~~  266 (286)
T 3uqc_A          244 VQGDGGIR-SASTLLNLMQQATAV  266 (286)
T ss_dssp             HCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred             cccCCccC-CHHHHHHHHHHHhcc
Confidence            99999999 999999999988654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.85  E-value=9.9e-11  Score=88.22  Aligned_cols=81  Identities=11%  Similarity=0.036  Sum_probs=52.3

Q ss_pred             hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH----HHHHHHHH
Q 047377           33 SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM----EGVMRAMG  108 (160)
Q Consensus        33 ~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~----~~~~~~~~  108 (160)
                      ...++.++||||+|++++|+++|..||.......      ..       ...........   ...+.    .....+..
T Consensus       172 ~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~------~~-------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  235 (299)
T 3m2w_A          172 GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA------IS-------PGMKTRIRMGQ---YEFPNPEWSEVSEEVKM  235 (299)
T ss_dssp             TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------------CCSCCSSCTTC---CSSCHHHHTTSCHHHHH
T ss_pred             cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh------hh-------HHHHHHHhhcc---ccCCchhcccCCHHHHH
Confidence            4567889999999999999999999996321100      00       00000000001   11121    22356788


Q ss_pred             HHHHccccCCCCCCCHHHHHH
Q 047377          109 IAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       109 l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ++.+||+.+|.+||++.++++
T Consensus       236 li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          236 LIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHcccChhhCCCHHHHhc
Confidence            999999999999999999987

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.20  E-value=1.2e-07  Score=72.30  Aligned_cols=89  Identities=12%  Similarity=0.035  Sum_probs=55.2

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeee-hhhhhhCCCCCCCCchhHH-HHHHHHHcCCccccccchhhh-hccccCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALS-SSQLISGEKAIDEEGKVLW-AKVEGILEGNEGRKVKRVKEW-MDEILLQD   96 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvv-l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~d~~l~~~   96 (160)
                      .+++.|+|||.+.+.. +.++||||++++ ..++.+|..||..   ..+ ......+.          ... ..... ..
T Consensus       238 ~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~---~~~~~~~~~~~~----------~~~~~~~~~-~~  302 (336)
T 2vuw_A          238 VFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN---VLWLHYLTDKML----------KQMTFKTKC-NT  302 (336)
T ss_dssp             ECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH---HHHHHHHHHHHH----------HTCCCSSCC-CS
T ss_pred             EEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc---hhhhhHHHHhhh----------hhhccCccc-ch
Confidence            4568999999987555 899999998776 6778889998741   001 00001110          000 00111 11


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPSMVDIV  128 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~  128 (160)
                      ..+......+.+++.+||+.+     ++.|++
T Consensus       303 ~~~~~~s~~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          303 PAMKQIKRKIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred             hhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence            223356677899999999976     788776

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=88.94  E-value=0.05  Score=44.51  Aligned_cols=35  Identities=3%  Similarity=-0.251  Sum_probs=13.9

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCC
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEK   57 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~   57 (160)
                      +|+|||||++. +.+..++|+||.|++++++.++..
T Consensus       402 Tp~YmAPE~l~-g~~~~~~d~~s~g~~~~~l~~~~~  436 (569)
T 4azs_A          402 SFFVFVNELFA-ENKSWNGFWRSAPVHPFNLPQPWS  436 (569)
T ss_dssp             HHHHHHHHHC------------------CCCCTTHH
T ss_pred             chhhccHHHhC-CCCCCcccccccccchhhhccccc
Confidence            47899999885 567788999999999888766543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	160
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-05
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-04
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-04
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	0.001
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	6e-04
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	0.003
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	0.002
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	0.004
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	0.002
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	0.003
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	0.003
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	0.003
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	0.003
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	0.003
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	0.004
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	0.004

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 3e-05
 Identities = 14/84 (16%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 63  GKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRP 122
           G V+W  +              V + +++   +    M+       + + C  ++ ++RP
Sbjct: 200 GIVMWEVMTYGERPYWELSNHEVMKAINDGF-RLPTPMDCPSAIYQLMMQCWQQERARRP 258

Query: 123 SMVDIVHAVS---KSDDSVSDISD 143
              DIV  +    ++ DS+  ++D
Sbjct: 259 KFADIVSILDKLIRAPDSLKTLAD 282

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 2e-04
 Identities = 11/47 (23%), Positives = 23/47 (48%), Gaps = 3/47 (6%)

Query: 1   MESVMSAMGIAIACLHKDPSKRPSMVDIVYALS---KSDDLLSDISD 44
           M+   +   + + C  ++ ++RP   DIV  L    ++ D L  ++D
Sbjct: 236 MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLAD 282

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 4e-04
 Identities = 10/76 (13%), Positives = 28/76 (36%)

Query: 58  AIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEGVMRAMGIAIACLHKD 117
            I E+ ++ +  +       E  +    ++ +   +     S E +     I   C + +
Sbjct: 219 GIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYAN 278

Query: 118 PSKRPSMVDIVHAVSK 133
            + R + + I   +S+
Sbjct: 279 GAARLTALRIKKTLSQ 294

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 0.001
 Identities = 7/34 (20%), Positives = 15/34 (44%)

Query: 1   MESVMSAMGIAIACLHKDPSKRPSMVDIVYALSK 34
            E++     I   C + + + R + + I   LS+
Sbjct: 261 CEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.6 bits (84), Expect = 6e-04
 Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 3/80 (3%)

Query: 63  GKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRP 122
           G +LW      +    G  + +V E +++   +         +   +  AC   +PS RP
Sbjct: 203 GVLLWEIATYGMSPYPGIDLSQVYELLEKDY-RMERPEGCPEKVYELMRACWQWNPSDRP 261

Query: 123 SMVDIVHAVSK--SDDSVSD 140
           S  +I  A      + S+SD
Sbjct: 262 SFAEIHQAFETMFQESSISD 281

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.3 bits (78), Expect = 0.003
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 5/38 (13%)

Query: 10  IAIACLHKDPSKRPSMVDIVYALSKSDDLL--SDISDD 45
           +  AC   +PS RPS  +I  A    + +   S ISD+
Sbjct: 248 LMRACWQWNPSDRPSFAEIHQAF---ETMFQESSISDE 282

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.1 bits (80), Expect = 0.002
 Identities = 9/25 (36%), Positives = 12/25 (48%)

Query: 10  IAIACLHKDPSKRPSMVDIVYALSK 34
           + + C  KD + RP    IV  L K
Sbjct: 265 LMLDCWQKDRNHRPKFGQIVNTLDK 289

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.3 bits (78), Expect = 0.004
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 109 IAIACLHKDPSKRPSMVDIVHAVSK 133
           + + C  KD + RP    IV+ + K
Sbjct: 265 LMLDCWQKDRNHRPKFGQIVNTLDK 289

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (79), Expect = 0.002
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 3/35 (8%)

Query: 10  IAIACLHKDPSKRPSMVDIVYALSKSDDLLSDISD 44
           I   C   DP KRP+   IV  + K    +S+ ++
Sbjct: 280 IMKTCWDADPLKRPTFKQIVQLIEK---QISESTN 311

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (79), Expect = 0.003
 Identities = 7/25 (28%), Positives = 12/25 (48%)

Query: 10  IAIACLHKDPSKRPSMVDIVYALSK 34
           + + C H     RPS  ++V  +S 
Sbjct: 266 VMLKCWHPKAEMRPSFSELVSRISA 290

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (79), Expect = 0.003
 Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 1/71 (1%)

Query: 63  GKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISMEGVMRAMGIAIACLHKDPSKRP 122
           G VLW       +  +G   ++V  ++ E  L D            +   C   +P  RP
Sbjct: 222 GVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD-KPDNCPDMLFELMRMCWQYNPKMRP 280

Query: 123 SMVDIVHAVSK 133
           S ++I+ ++ +
Sbjct: 281 SFLEIISSIKE 291

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (78), Expect = 0.003
 Identities = 6/25 (24%), Positives = 14/25 (56%)

Query: 10  IAIACLHKDPSKRPSMVDIVYALSK 34
           +   C   +P  RPS ++I+ ++ +
Sbjct: 267 LMRMCWQYNPKMRPSFLEIISSIKE 291

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 34.4 bits (78), Expect = 0.003
 Identities = 8/25 (32%), Positives = 11/25 (44%)

Query: 10  IAIACLHKDPSKRPSMVDIVYALSK 34
           +   C  K P+ RPS   I   L +
Sbjct: 274 LMRLCWSKLPADRPSFCSIHRILQR 298

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (78), Expect = 0.003
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query: 10  IAIACLHKDPSKRPSMVDIVYALSK 34
             + C H +PS+RP+  ++V  L  
Sbjct: 269 TMLDCWHGEPSQRPTFSELVEHLGN 293

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 0.004
 Identities = 3/23 (13%), Positives = 7/23 (30%)

Query: 10  IAIACLHKDPSKRPSMVDIVYAL 32
           +   C       RP  + +   +
Sbjct: 244 LMSDCWIYKWEDRPDFLTVEQRM 266

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (77), Expect = 0.004
 Identities = 7/25 (28%), Positives = 14/25 (56%)

Query: 10  IAIACLHKDPSKRPSMVDIVYALSK 34
           +   C  + P +RPS   I+ +L++
Sbjct: 258 LMRQCWREKPYERPSFAQILVSLNR 282

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	160
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.77
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.76
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.76
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.76
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.75
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.75
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.75
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.74
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.73
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.73
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.73
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.73
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.72
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.72
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.72
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.72
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.71
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.71
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.71
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.7
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.7
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.68
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.66
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.66
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.65
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.64
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.63
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.63
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.62
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.62
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.61
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.61
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.6
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.6
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.59
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.57
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.57
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.55
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.54
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.54
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.54
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.53
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.52
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.51
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.51
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.5
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.49
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.49
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.44
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.43
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.42
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.39
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.37
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.34
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.33
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.32
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.31
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.3
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.26
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.19
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.19
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.13

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=1.9e-20  Score=140.93  Aligned_cols=98  Identities=16%  Similarity=0.118  Sum_probs=73.8

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .++.|+|||.+..+.++.++|||||||++|||+| |+.||.......   +...+.               ... ..+.+
T Consensus       195 ~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~---~~~~i~---------------~~~-~~~~~  255 (299)
T d1jpaa_         195 IPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD---VINAIE---------------QDY-RLPPP  255 (299)
T ss_dssp             -CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---HHHHHH---------------TTC-CCCCC
T ss_pred             CCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHH---HHHHHH---------------cCC-CCCCC
Confidence            4578999999999999999999999999999998 899986332211   111111               111 22333


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      ..++..+.+++..||+.+|.+||++.+|++.|+++.++
T Consensus       256 ~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~  293 (299)
T d1jpaa_         256 MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN  293 (299)
T ss_dssp             TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence            44456778999999999999999999999999988654

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=2.8e-20  Score=138.97  Aligned_cols=100  Identities=12%  Similarity=0.057  Sum_probs=73.0

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||++..+.++.++|||||||++|||+++..|+..... . ..+...+.               ... ..+.+
T Consensus       174 ~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~-~-~~~~~~i~---------------~~~-~~~~~  235 (283)
T d1mqba_         174 KIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS-N-HEVMKAIN---------------DGF-RLPTP  235 (283)
T ss_dssp             CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-H-HHHHHHHH---------------TTC-CCCCC
T ss_pred             CCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCC-H-HHHHHHHh---------------ccC-CCCCc
Confidence            345789999999999999999999999999999996655432111 1 11112221               121 22334


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      ..++..+.+++.+||+.+|.+||+|.+|++.|+++.+.
T Consensus       236 ~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~  273 (283)
T d1mqba_         236 MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  273 (283)
T ss_dssp             TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             hhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence            44556788999999999999999999999999988654

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=3.6e-20  Score=138.04  Aligned_cols=105  Identities=12%  Similarity=0.106  Sum_probs=73.1

Q ss_pred             CCCCCCcchhhHhhh---cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           19 PSKRPSMVDIVYALS---KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~---~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      ..+++.|||||.+..   +.++.++|||||||++|||+||+.||.......  .+...+.      .    ....+.+  
T Consensus       166 ~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~--~~~~~~~------~----~~~~p~~--  231 (276)
T d1uwha_         166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD--QIIFMVG------R----GYLSPDL--  231 (276)
T ss_dssp             CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--HHHHHHH------H----TSCCCCG--
T ss_pred             cccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHH--HHHHHHh------c----CCCCCcc--
Confidence            345689999999864   358899999999999999999999997322111  1111111      0    0011111  


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      ...+..++..+.+++.+||+.+|.+|||+.+|++.|+.+.+.
T Consensus       232 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~  273 (276)
T d1uwha_         232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS  273 (276)
T ss_dssp             GGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             hhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence            122223345678999999999999999999999999988653

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=3.8e-20  Score=140.73  Aligned_cols=94  Identities=12%  Similarity=0.055  Sum_probs=70.9

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ++.|||||.+..+.++.++|||||||++|||+| |+.||.......  .+...+.               ... ..+.|.
T Consensus       229 t~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~--~~~~~~~---------------~~~-~~~~p~  290 (325)
T d1rjba_         229 PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA--NFYKLIQ---------------NGF-KMDQPF  290 (325)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--HHHHHHH---------------TTC-CCCCCT
T ss_pred             CCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHH--HHHHHHh---------------cCC-CCCCCC
Confidence            578999999999999999999999999999997 899997322111  1112221               111 223334


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHc
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSK  133 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~  133 (160)
                      .+...+.+++.+||+.+|.+|||+.||++.|..
T Consensus       291 ~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         291 YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            444677899999999999999999999999863

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=6.1e-20  Score=136.80  Aligned_cols=96  Identities=13%  Similarity=0.006  Sum_probs=72.4

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+++.|+|||.+..+.++.++|||||||++||+++ |+.||......   .+...+.               ... ..+.
T Consensus       171 ~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~---~~~~~i~---------------~~~-~~~~  231 (277)
T d1xbba_         171 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS---EVTAMLE---------------KGE-RMGC  231 (277)
T ss_dssp             CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHHHHH---------------TTC-CCCC
T ss_pred             CCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH---HHHHHHH---------------cCC-CCCC
Confidence            34578999999999999999999999999999997 89999743221   1112221               111 2233


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      |..++..+.+++..||+.||.+||++.+|+..|+..
T Consensus       232 p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         232 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence            344456778999999999999999999999988765

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=3.1e-20  Score=137.33  Aligned_cols=97  Identities=9%  Similarity=0.028  Sum_probs=69.6

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhC-CCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISG-EKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      +++.|+|||.+..+.++.++|||||||++||++|+ .+|+.......   +...+.               ... ....|
T Consensus       164 gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~---~~~~i~---------------~~~-~~~~p  224 (263)
T d1sm2a_         164 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---VVEDIS---------------TGF-RLYKP  224 (263)
T ss_dssp             -CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHH---HHHHHH---------------HTC-CCCCC
T ss_pred             cCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHH---HHHHHH---------------hcC-CCCCc
Confidence            34689999999999999999999999999999995 55554222111   111111               111 11222


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ..+...+.+++..||+.+|.+||++.+|++.|+++.+
T Consensus       225 ~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         225 RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            3334567899999999999999999999999998854

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=7.6e-20  Score=136.87  Aligned_cols=97  Identities=11%  Similarity=0.003  Sum_probs=72.8

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      +++.|+|||.+..+.++.++|||||||++||++| |+.||.......   +...+.               ... ..+.|
T Consensus       174 gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~---~~~~i~---------------~~~-~~~~p  234 (285)
T d1u59a_         174 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---VMAFIE---------------QGK-RMECP  234 (285)
T ss_dssp             CCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH---HHHHHH---------------TTC-CCCCC
T ss_pred             cCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHH---HHHHHH---------------cCC-CCCCC
Confidence            4578999999999999999999999999999998 899997432211   112221               111 12333


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ..++..+.+++..||+.+|.+||+|.+|++.|+....
T Consensus       235 ~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         235 PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            3444567899999999999999999999999987643

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.4e-19  Score=133.87  Aligned_cols=98  Identities=12%  Similarity=0.003  Sum_probs=72.4

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .++.|+|||++.++.++.++||||||+++|||+| |+.|+.........   ..+.               ... ..+.+
T Consensus       162 ~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~---~~i~---------------~~~-~~~~~  222 (262)
T d1byga_         162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV---PRVE---------------KGY-KMDAP  222 (262)
T ss_dssp             CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHH---HHHT---------------TTC-CCCCC
T ss_pred             ccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHH---HHHH---------------cCC-CCCCC
Confidence            3468999999999999999999999999999998 67777632211111   1111               111 22333


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      ......+.+++.+||+.||.+||++.+|++.|+.+.++
T Consensus       223 ~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~~  260 (262)
T d1byga_         223 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  260 (262)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHhC
Confidence            33345678999999999999999999999999988653

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.2e-19  Score=136.21  Aligned_cols=99  Identities=12%  Similarity=0.054  Sum_probs=71.4

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhC-CCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISG-EKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+++.|+|||.+..+.++.++|||||||+++||++| ..||.......  .+...+.               ... ....
T Consensus       197 ~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~--~~~~~~~---------------~~~-~~~~  258 (299)
T d1ywna1         197 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLK---------------EGT-RMRA  258 (299)
T ss_dssp             CCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH--HHHHHHH---------------HTC-CCCC
T ss_pred             eeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHH--HHHHHHh---------------cCC-CCCC
Confidence            345789999999999999999999999999999986 55675322111  1111111               111 1223


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      +......+.+++.+||+.||.+||++.||+++|+++.+
T Consensus       259 ~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq  296 (299)
T d1ywna1         259 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  296 (299)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            33334567899999999999999999999999998753

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.1e-19  Score=134.91  Aligned_cols=97  Identities=9%  Similarity=-0.025  Sum_probs=69.7

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCC-CCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAI-DEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..++.|+|||.+..+.++.++|||||||++|||+||..|+ ......   .+...+.               ... ....
T Consensus       171 ~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~---~~~~~i~---------------~~~-~~~~  231 (272)
T d1qpca_         171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP---EVIQNLE---------------RGY-RMVR  231 (272)
T ss_dssp             CCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH---HHHHHHH---------------TTC-CCCC
T ss_pred             CCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHH---HHHHHHH---------------hcC-CCCC
Confidence            3457899999999999999999999999999999965554 322211   1111111               111 1122


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      |......+.+++.+||+.+|++||||.+|++.|++..
T Consensus       232 p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~f  268 (272)
T d1qpca_         232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (272)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhh
Confidence            3333456788999999999999999999999998764

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.7e-19  Score=132.04  Aligned_cols=95  Identities=12%  Similarity=0.028  Sum_probs=71.0

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      +++.|+|||.+..+.++.++|||||||++|||+| |+.||........   ...+.               ... ....|
T Consensus       163 ~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~---~~~i~---------------~~~-~~~~p  223 (258)
T d1k2pa_         163 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET---AEHIA---------------QGL-RLYRP  223 (258)
T ss_dssp             CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH---HHHHH---------------TTC-CCCCC
T ss_pred             CCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHH---HHHHH---------------hCC-CCCCc
Confidence            4467999999999999999999999999999998 7999873332111   11221               111 12233


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      ......+.+++.+||+.+|.+||++.+|+..|.++
T Consensus       224 ~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         224 HLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             ccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence            33445778999999999999999999999998764

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.7e-19  Score=135.48  Aligned_cols=97  Identities=16%  Similarity=0.152  Sum_probs=72.9

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      +++.|+|||.+..+.++.++|||||||++|||+| |..||.........   ..+               .... ..+.|
T Consensus       175 gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~---~~i---------------~~~~-~~~~p  235 (317)
T d1xkka_         175 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---SIL---------------EKGE-RLPQP  235 (317)
T ss_dssp             CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHH---HHH---------------HHTC-CCCCC
T ss_pred             cCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHH---HHH---------------HcCC-CCCCC
Confidence            4578999999999999999999999999999998 78888633221111   111               1111 22333


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      ..+...+.+++.+||+.+|.+||++.+|+..|+++..
T Consensus       236 ~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         236 PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence            3444567899999999999999999999999987753

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.72  E-value=2.9e-19  Score=134.36  Aligned_cols=98  Identities=11%  Similarity=-0.009  Sum_probs=71.7

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCC-CCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGE-KAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ...++.|+|||.+....++.++|||||||++|||++|. +||........   ...+.              +..  ..+
T Consensus       202 ~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~---~~~v~--------------~~~--~~~  262 (301)
T d1lufa_         202 DAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV---IYYVR--------------DGN--ILA  262 (301)
T ss_dssp             CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH---HHHHH--------------TTC--CCC
T ss_pred             CCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHH---HHHHH--------------cCC--CCC
Confidence            34457899999999999999999999999999999985 56653221111   11121              111  112


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      .|..++..+..++.+||+.+|++||+|.||++.|+++.
T Consensus       263 ~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         263 CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            23333456789999999999999999999999999874

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=3.1e-19  Score=132.48  Aligned_cols=98  Identities=12%  Similarity=0.020  Sum_probs=72.5

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+++.|+|||.+..+.++.++|||||||++|||++ |..|+..........  ....                .. ..+.
T Consensus       170 ~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~--~i~~----------------~~-~~~~  230 (273)
T d1mp8a_         170 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG--RIEN----------------GE-RLPM  230 (273)
T ss_dssp             -CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH--HHHT----------------TC-CCCC
T ss_pred             ecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHH--HHHc----------------CC-CCCC
Confidence            34578999999999999999999999999999987 898987332211111  1111                00 1123


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      +...+..+.+++.+||..||.+||++.+|++.|+++.+
T Consensus       231 ~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  268 (273)
T d1mp8a_         231 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  268 (273)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            33344567899999999999999999999999998754

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=3.6e-19  Score=132.33  Aligned_cols=97  Identities=10%  Similarity=0.035  Sum_probs=71.6

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+++.|+|||.+..+.++.++|||||||++|||+| |+.||.........  .....               ... ..+.
T Consensus       175 ~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~--~~i~~---------------~~~-~~~~  236 (273)
T d1u46a_         175 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL--HKIDK---------------EGE-RLPR  236 (273)
T ss_dssp             -CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH--HHHHT---------------SCC-CCCC
T ss_pred             ccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHH--HHHHh---------------CCC-CCCC
Confidence            34568999999999999999999999999999998 89999643321111  12221               111 1122


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcc
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKS  134 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l  134 (160)
                      +...+..+.+++..||+.+|++||+|.+|++.|+..
T Consensus       237 ~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         237 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            233345678999999999999999999999999875

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=2.2e-19  Score=135.55  Aligned_cols=100  Identities=11%  Similarity=0.029  Sum_probs=73.3

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCC-CCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGE-KAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      +++.|+|||.+..+.++.++|||||||+++||++|. .|+......   .+...+.               ... ..+.+
T Consensus       188 gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~---~~~~~i~---------------~~~-~~~~~  248 (309)
T d1fvra_         188 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA---ELYEKLP---------------QGY-RLEKP  248 (309)
T ss_dssp             CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---HHHHHGG---------------GTC-CCCCC
T ss_pred             cCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHH---HHHHHHH---------------hcC-CCCCC
Confidence            457899999999999999999999999999999975 456422211   1111111               111 12233


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccCCC
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDSVS  139 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~~~  139 (160)
                      ......+.+++.+||+.||++||+|.+|++.|+++.+...
T Consensus       249 ~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~~  288 (309)
T d1fvra_         249 LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK  288 (309)
T ss_dssp             TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCc
Confidence            3344577899999999999999999999999999876544

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=4.3e-19  Score=134.17  Aligned_cols=99  Identities=11%  Similarity=0.023  Sum_probs=71.4

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +++.|+|||.+..+.++.++||||||++++|+++|..|+..... ..........                .. ....|.
T Consensus       196 gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~-~~~~~~~i~~----------------g~-~~~~p~  257 (311)
T d1r0pa_         196 LPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-TFDITVYLLQ----------------GR-RLLQPE  257 (311)
T ss_dssp             CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHHHHHT----------------TC-CCCCCT
T ss_pred             ccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCC-HHHHHHHHHc----------------CC-CCCCcc
Confidence            45789999999999999999999999999999998777652211 1110011111                00 112222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      .+...+.+++.+||+.||.+||+|.||++.|+++.+.
T Consensus       258 ~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~  294 (311)
T d1r0pa_         258 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  294 (311)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             cCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence            3345678999999999999999999999999999764

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.71  E-value=3.7e-19  Score=133.12  Aligned_cols=98  Identities=14%  Similarity=0.040  Sum_probs=71.8

Q ss_pred             CCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCHH
Q 047377           22 RPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISME  101 (160)
Q Consensus        22 ~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~  101 (160)
                      ++.|+|||.+..+.++.++|||||||++|||++|..|+.....  ...+...+.               ... ..+.+..
T Consensus       179 ~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~--~~~~~~~i~---------------~~~-~~~~~~~  240 (287)
T d1opja_         179 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLE---------------KDY-RMERPEG  240 (287)
T ss_dssp             CGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHHHHHH---------------TTC-CCCCCTT
T ss_pred             cccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcch--HHHHHHHHh---------------cCC-CCCCCcc
Confidence            4679999999999999999999999999999997666532211  111112221               121 2233334


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377          102 GVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus       102 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      ....+.+++.+||+.||.+||++.+|++.|+.+.+.
T Consensus       241 ~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~  276 (287)
T d1opja_         241 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  276 (287)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred             chHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence            445678999999999999999999999999988543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=4.7e-19  Score=133.14  Aligned_cols=96  Identities=13%  Similarity=0.081  Sum_probs=72.1

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .++.|+|||.+..+.++.++|||||||++|||++ |..||......   .+...+.               ... ....|
T Consensus       199 ~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~---~~~~~i~---------------~~~-~~~~p  259 (299)
T d1fgka_         199 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---ELFKLLK---------------EGH-RMDKP  259 (299)
T ss_dssp             CGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---HHHHHHH---------------TTC-CCCCC
T ss_pred             CChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH---HHHHHHH---------------cCC-CCCCC
Confidence            4468999999999999999999999999999998 68887633221   1112221               111 22333


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSD  135 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~  135 (160)
                      ......+.+++.+||+.+|.+|||+.||++.|+++.
T Consensus       260 ~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         260 SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence            333456789999999999999999999999999874

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=7e-19  Score=130.52  Aligned_cols=92  Identities=17%  Similarity=-0.017  Sum_probs=66.4

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..++|.|+|||.+....++.++|||||||+++||++|+.||..........  ....               ..  ....
T Consensus       174 ~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~--~i~~---------------~~--~~~~  234 (269)
T d2java1         174 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG--KIRE---------------GK--FRRI  234 (269)
T ss_dssp             --CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHH---------------TC--CCCC
T ss_pred             CCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHH--HHHc---------------CC--CCCC
Confidence            455789999999999999999999999999999999999997433211111  1111               11  1112


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +......+.+++.+||+.||.+||++.|+++
T Consensus       235 ~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         235 PYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            2223346788999999999999999999875

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.1e-18  Score=130.57  Aligned_cols=101  Identities=14%  Similarity=0.026  Sum_probs=72.2

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ...++.|+|||++..+.++.++||||||+++|||++|..|+..... . ..+...+.               ... ..+.
T Consensus       174 ~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~-~-~~~~~~i~---------------~~~-~~~~  235 (285)
T d1fmka3         174 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-N-REVLDQVE---------------RGY-RMPC  235 (285)
T ss_dssp             --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-H-HHHHHHHH---------------TTC-CCCC
T ss_pred             ccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCC-H-HHHHHHHH---------------hcC-CCCC
Confidence            3445789999999999999999999999999999997666532211 1 11111111               111 1223


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHccccC
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDDS  137 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~~  137 (160)
                      +..+...+.+++.+||+.+|++||++.+|+..|++....
T Consensus       236 ~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~  274 (285)
T d1fmka3         236 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  274 (285)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             CcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence            334445778999999999999999999999999987654

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.5e-18  Score=131.01  Aligned_cols=99  Identities=17%  Similarity=0.119  Sum_probs=70.6

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhh-CCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLIS-GEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..++.|+|||.+..+.++.++||||||++++||+| |.+|+.......  .               +..++.... ....
T Consensus       208 ~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~--~---------------~~~~i~~~~-~~~~  269 (311)
T d1t46a_         208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--K---------------FYKMIKEGF-RMLS  269 (311)
T ss_dssp             EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH--H---------------HHHHHHHTC-CCCC
T ss_pred             ccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHH--H---------------HHHHHhcCC-CCCC
Confidence            33578999999999999999999999999999998 555554221110  0               111111122 2223


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      +......+.+++.+||+.||.+||++.+|++.|+++.+
T Consensus       270 ~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~  307 (311)
T d1t46a_         270 PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS  307 (311)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhc
Confidence            33334567899999999999999999999999987643

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=6.1e-18  Score=125.03  Aligned_cols=89  Identities=12%  Similarity=0.063  Sum_probs=66.1

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      +++.|+|||.+.+..++.++||||+||+++||++|+.||..........  ....               ..   ...|.
T Consensus       166 Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~--~i~~---------------~~---~~~p~  225 (263)
T d2j4za1         166 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK--RISR---------------VE---FTFPD  225 (263)
T ss_dssp             EEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH--HHHT---------------TC---CCCCT
T ss_pred             CCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHH--HHHc---------------CC---CCCCc
Confidence            4579999999999999999999999999999999999997433211111  1111               11   11222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .....+.+++.+||+.||.+|||+.|+++
T Consensus       226 ~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         226 FVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            23346688999999999999999999975

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=3.4e-18  Score=128.70  Aligned_cols=107  Identities=9%  Similarity=-0.010  Sum_probs=71.8

Q ss_pred             CCCCCCcchhhHhhhc------CCcccCccCCCeeehhhhhhCCCCCCCCch------------hHHHHHHHHHcCCccc
Q 047377           19 PSKRPSMVDIVYALSK------SDDLLSDISDDALSSSQLISGEKAIDEEGK------------VLWAKVEGILEGNEGR   80 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~------~~s~ksDv~s~Gvvl~elltg~~p~~~~~~------------~~~~~~~~~~~~~~~~   80 (160)
                      ..+++.|+|||++...      .++.++|||||||++|||+||..|+.....            ...........     
T Consensus       172 ~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  246 (303)
T d1vjya_         172 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC-----  246 (303)
T ss_dssp             CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHT-----
T ss_pred             eecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHh-----
Confidence            3457899999998654      367899999999999999999887641110            00011111110     


Q ss_pred             cccchhhhhccccCCCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           81 KVKRVKEWMDEILLQDSI-SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        81 ~~~~~~~~~d~~l~~~~~-~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                           ....+|.+ +..+ +......+.+++.+||+.||.+||++.||++.|+.+.+
T Consensus       247 -----~~~~~p~~-~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  297 (303)
T d1vjya_         247 -----EQKLRPNI-PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             -----TSCCCCCC-CGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -----ccccCCCC-CcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence                 01112222 1111 22456778899999999999999999999999998754

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.65  E-value=1.9e-17  Score=122.79  Aligned_cols=100  Identities=13%  Similarity=0.111  Sum_probs=69.8

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||++.++.++.++||||+||+++||++|+.||........  ....+.+     ......    .. ...++
T Consensus       175 ~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~--~~~~~~~-----~~~~~~----~~-~~~~s  242 (277)
T d1o6ya_         175 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV--AYQHVRE-----DPIPPS----AR-HEGLS  242 (277)
T ss_dssp             ----TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHC-----CCCCGG----GT-SSSCC
T ss_pred             cCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHH--HHHHHhc-----CCCCCc----hh-ccCCC
Confidence            456899999999988999999999999999999999999974432111  1122221     000000    11 12223


Q ss_pred             HHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHccc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRP-SMVDIVHAVSKSD  135 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RP-s~~ev~~~L~~l~  135 (160)
                          ..+.+++.+|++.||.+|| ++.++...|.++.
T Consensus       243 ----~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         243 ----ADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             ----HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence                4568899999999999999 8999999998774

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=6.5e-18  Score=127.35  Aligned_cols=100  Identities=9%  Similarity=0.016  Sum_probs=72.9

Q ss_pred             CCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCC-CCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCC
Q 047377           18 DPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGE-KAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        18 ~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      ....++.|+|||.+..+.++.++||||||++++||+||. .|+......  .. ...+              .+..  ..
T Consensus       194 ~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~--~~-~~~i--------------~~~~--~~  254 (308)
T d1p4oa_         194 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--QV-LRFV--------------MEGG--LL  254 (308)
T ss_dssp             SSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--HH-HHHH--------------HTTC--CC
T ss_pred             ceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHH--HH-HHHH--------------HhCC--CC
Confidence            334568999999999999999999999999999999985 666422211  11 1111              1111  11


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      +.+..+...+.+++.+||+.+|.+||++.+|++.|++..+
T Consensus       255 ~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         255 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            2233334568899999999999999999999999998755

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.63  E-value=2.3e-17  Score=124.33  Aligned_cols=94  Identities=16%  Similarity=0.071  Sum_probs=66.2

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+.++.++.++||||+||+++||++|+.||..........  ....+     .        ... ..+.+
T Consensus       170 ~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~--~i~~~-----~--------~~~-~~~~~  233 (307)
T d1a06a_         170 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFE--QILKA-----E--------YEF-DSPYW  233 (307)
T ss_dssp             ---CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH--HHHTT-----C--------CCC-CTTTT
T ss_pred             eeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHH--HHhcc-----C--------CCC-CCccc
Confidence            35689999999999999999999999999999999999997443221111  22210     0        011 11112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+||+.||.+||++.|+++
T Consensus       234 ~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         234 DDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            223346688999999999999999999876

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=3.3e-17  Score=122.49  Aligned_cols=96  Identities=10%  Similarity=0.036  Sum_probs=67.1

Q ss_pred             cCCCCCCCcchhhHhh-----hcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhcc
Q 047377           17 KDPSKRPSMVDIVYAL-----SKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDE   91 (160)
Q Consensus        17 ~~~~~~~~y~aPE~~~-----~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   91 (160)
                      ....+++.|+|||.+.     ...++.++|||||||+++||++|+.||..........  ....+      .      .+
T Consensus       168 ~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~--~i~~~------~------~~  233 (288)
T d2jfla1         168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL--KIAKS------E------PP  233 (288)
T ss_dssp             TCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH--HHHHS------C------CC
T ss_pred             cccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHH--HHHcC------C------CC
Confidence            3456789999999984     4568899999999999999999999997432211111  12210      0      01


Q ss_pred             ccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           92 ILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        92 ~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .   ...+......+.+++.+||+.||.+||++.|+++
T Consensus       234 ~---~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         234 T---LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             C---CSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             C---CCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1   1222333456788999999999999999998865

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.1e-17  Score=124.16  Aligned_cols=92  Identities=12%  Similarity=0.126  Sum_probs=63.5

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .++|.|+|||.+. +.++.++|||||||+++||++|+.||.......  .+...+.      ...     .+    ...+
T Consensus       174 ~GT~~Y~aPE~~~-~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~--~~~~~i~------~~~-----~~----~~~~  235 (270)
T d1t4ha_         174 IGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAA--QIYRRVT------SGV-----KP----ASFD  235 (270)
T ss_dssp             CSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH--HHHHHHT------TTC-----CC----GGGG
T ss_pred             ccCccccCHHHhC-CCCCCcCchhhHHHHHHHHHHCCCCCCCcccHH--HHHHHHH------cCC-----CC----cccC
Confidence            4578999999875 569999999999999999999999996322111  1112221      000     00    0111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+||+.||++|||+.|+++
T Consensus       236 ~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         236 KVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            112234678999999999999999999875

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=3.9e-17  Score=122.40  Aligned_cols=93  Identities=16%  Similarity=0.056  Sum_probs=67.3

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+.++.++.++||||+||+++||++|+.||..........  ....+      .      .+   ....+
T Consensus       177 ~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~--~~~~~------~------~~---~~~~~  239 (293)
T d1yhwa1         177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY--LIATN------G------TP---ELQNP  239 (293)
T ss_dssp             CSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH--HHHHH------C------SC---CCSSG
T ss_pred             ccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHH--HHHhC------C------CC---CCCCc
Confidence            35688999999999999999999999999999999999997433211111  22210      0      01   11222


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+||+.||.+||++.|+++
T Consensus       240 ~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         240 EKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             GGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            333456688999999999999999999864

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=4.1e-17  Score=121.03  Aligned_cols=95  Identities=13%  Similarity=0.015  Sum_probs=64.7

Q ss_pred             CCCCCCCcchhhHhhhcCC-cccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCC
Q 047377           18 DPSKRPSMVDIVYALSKSD-DLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQD   96 (160)
Q Consensus        18 ~~~~~~~y~aPE~~~~~~~-s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~   96 (160)
                      ...++|.|||||.+....+ +.++||||+||+++||++|+.||.......... .....               ... ..
T Consensus       164 ~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~-~~~~~---------------~~~-~~  226 (271)
T d1nvra_         164 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-SDWKE---------------KKT-YL  226 (271)
T ss_dssp             CCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHH-HHHHT---------------TCT-TS
T ss_pred             ceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHH-HHHhc---------------CCC-CC
Confidence            3446789999999988776 578999999999999999999997433211111 01111               000 00


Q ss_pred             CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           97 SISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        97 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .........+.+++.+||+.||.+||++.|+++
T Consensus       227 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         227 NPWKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            111112245578899999999999999998854

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.61  E-value=1.5e-16  Score=119.05  Aligned_cols=105  Identities=9%  Similarity=-0.055  Sum_probs=70.7

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+.+..++.++|||||||+++|+++|+.||................      ... .....+.+ ...+|
T Consensus       174 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~-~~~~p  245 (299)
T d1ckia_         174 TGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS------EKK-MSTPIEVL-CKGYP  245 (299)
T ss_dssp             CCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHH------HHH-HHSCHHHH-TTTSC
T ss_pred             CCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhh------ccc-CCCChhHh-ccCCC
Confidence            45789999999999999999999999999999999999997322111111000000      000 00000111 12233


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                          ..+.+++..||+.+|.+||++.++.+.|+.+..
T Consensus       246 ----~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         246 ----SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             ----HHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence                456889999999999999999999888887643

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.60  E-value=4.3e-17  Score=123.00  Aligned_cols=94  Identities=14%  Similarity=0.105  Sum_probs=65.7

Q ss_pred             CCCCCCCcchhhHhhh---cCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccC
Q 047377           18 DPSKRPSMVDIVYALS---KSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILL   94 (160)
Q Consensus        18 ~~~~~~~y~aPE~~~~---~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~   94 (160)
                      ...++|.|+|||.+..   +.++.++|||||||+++||++|..||......  ..+.....+            -.+.+.
T Consensus       170 ~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~--~~~~~i~~~------------~~~~~~  235 (309)
T d1u5ra_         170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHIAQN------------ESPALQ  235 (309)
T ss_dssp             CCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHS------------CCCCCS
T ss_pred             ccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhC------------CCCCCC
Confidence            3455689999999863   46899999999999999999999999643321  111122211            001110


Q ss_pred             CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 QDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ...+    ...+.+++.+||+.||.+|||+.|+++
T Consensus       236 ~~~~----s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         236 SGHW----SEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             CTTS----CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCC----CHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            1122    345688999999999999999999875

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.9e-17  Score=122.08  Aligned_cols=91  Identities=16%  Similarity=0.036  Sum_probs=67.2

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..+++.|+|||.+.+..++.++||||+||+++||++|+.||..........  ....               ...   .+
T Consensus       170 ~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~--~i~~---------------~~~---~~  229 (288)
T d1uu3a_         170 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ--KIIK---------------LEY---DF  229 (288)
T ss_dssp             CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHT---------------TCC---CC
T ss_pred             ccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHH--HHHc---------------CCC---CC
Confidence            346789999999999999999999999999999999999997433211111  2221               111   12


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      |......+.+++.+||+.||.+|||+.|++.
T Consensus       230 p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         230 PEKFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             CTTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             CccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence            2222345688999999999999999998755

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=5.1e-17  Score=121.49  Aligned_cols=95  Identities=17%  Similarity=0.073  Sum_probs=66.4

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..+++.|+|||.+..+.++.++||||+||+++||++|+.||.........  .....+     .....    +.. ... 
T Consensus       176 ~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~--~~i~~~-----~~~~~----~~~-~~~-  242 (293)
T d1jksa_         176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL--ANVSAV-----NYEFE----DEY-FSN-  242 (293)
T ss_dssp             CCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHTT-----CCCCC----HHH-HTT-
T ss_pred             cCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHH--HHHHhc-----CCCCC----chh-cCC-
Confidence            34557899999999999999999999999999999999999743321111  122210     00000    000 111 


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                         ....+.+++.+||+.||.+||++.|+++
T Consensus       243 ---~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         243 ---TSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             ---SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ---CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence               2245678999999999999999999876

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=3.8e-16  Score=116.92  Aligned_cols=112  Identities=10%  Similarity=0.013  Sum_probs=69.3

Q ss_pred             CCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCcccc---ccch-hhhhccc
Q 047377           18 DPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRK---VKRV-KEWMDEI   92 (160)
Q Consensus        18 ~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~---~~~~-~~~~d~~   92 (160)
                      ...+++.|+|||.+....++.++||||+||+++||++|+.||...... ....+...........   .... .......
T Consensus       174 ~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (305)
T d1blxa_         174 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSK  253 (305)
T ss_dssp             CCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCC
T ss_pred             CcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccc
Confidence            445678999999999999999999999999999999999999744321 1222222221000000   0000 0000000


Q ss_pred             c--CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           93 L--LQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        93 l--~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .  ............+.+++.+||+.||.+|||+.|+++
T Consensus       254 ~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         254 SAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             CCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            0  000111122345678899999999999999999876

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.57  E-value=2.7e-16  Score=120.48  Aligned_cols=95  Identities=15%  Similarity=0.059  Sum_probs=67.1

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+.+..++.++||||+||+++||++|+.||.......  .+.....+     .        ... .....
T Consensus       186 ~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~--~~~~i~~~-----~--------~~~-~~~~~  249 (350)
T d1koaa2         186 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE--TLRNVKSC-----D--------WNM-DDSAF  249 (350)
T ss_dssp             CSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHT-----C--------CCS-CCGGG
T ss_pred             cCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHH--HHHHHHhC-----C--------CCC-Ccccc
Confidence            45689999999999999999999999999999999999997433211  11122210     0        000 01111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ......+.+++.+||..||.+|||+.|+++.
T Consensus       250 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         250 SGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             GGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            1223456889999999999999999999873

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.6e-16  Score=121.02  Aligned_cols=98  Identities=11%  Similarity=0.049  Sum_probs=66.8

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhH-HHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVL-WAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..++|.|+|||.+....++.++||||+||++++|++|+.||....... ...+...+.            ...... +..
T Consensus       173 ~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~------------~~~~~~-~~~  239 (335)
T d2ozaa1         173 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR------------MGQYEF-PNP  239 (335)
T ss_dssp             CSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCC------------SCSSSC-CTT
T ss_pred             ccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHh------------cCCCCC-CCc
Confidence            345689999999998899999999999999999999999996322111 111001010            000011 111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ........+.+++.+|++.||.+||++.|++.
T Consensus       240 ~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         240 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             HHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            11233456789999999999999999999977

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=6.1e-16  Score=117.04  Aligned_cols=44  Identities=18%  Similarity=0.049  Sum_probs=39.4

Q ss_pred             CCCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCC
Q 047377           18 DPSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDE   61 (160)
Q Consensus        18 ~~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~   61 (160)
                      ...+++.|+|||++.+..++.++||||+||+++||++|+.||..
T Consensus       162 ~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~  205 (322)
T d1s9ja_         162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP  205 (322)
T ss_dssp             --CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSC
T ss_pred             cccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            34567899999999999999999999999999999999999974

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.54  E-value=4.8e-16  Score=119.11  Aligned_cols=94  Identities=14%  Similarity=0.098  Sum_probs=67.7

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|+|||.+.+..++.++||||+||+++||++|+.||..........  ....+             +... .....
T Consensus       189 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~--~i~~~-------------~~~~-~~~~~  252 (352)
T d1koba_         189 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQ--NVKRC-------------DWEF-DEDAF  252 (352)
T ss_dssp             CSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHH--HHHHC-------------CCCC-CSSTT
T ss_pred             cCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHhC-------------CCCC-Ccccc
Confidence            45689999999999999999999999999999999999997433211111  22210             0111 11122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ......+.+++.+||+.||.+||++.|+++
T Consensus       253 ~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         253 SSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            223346688999999999999999999976

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.54  E-value=1.3e-15  Score=115.09  Aligned_cols=91  Identities=12%  Similarity=0.040  Sum_probs=66.5

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..+++.|+|||.+.+..++.++||||+||+++||++|+.||..........  ....               ...   .+
T Consensus       161 ~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~--~i~~---------------~~~---~~  220 (316)
T d1fota_         161 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYE--KILN---------------AEL---RF  220 (316)
T ss_dssp             CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH--HHHH---------------CCC---CC
T ss_pred             ccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHH--HHHc---------------CCC---CC
Confidence            456789999999998899999999999999999999999997443211111  2221               111   12


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRP-----SMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~  129 (160)
                      |......+.+++.+|+..+|.+|+     ++.++++
T Consensus       221 p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         221 PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence            222234567899999999999996     8888875

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.53  E-value=8.8e-16  Score=118.11  Aligned_cols=94  Identities=7%  Similarity=-0.025  Sum_probs=64.5

Q ss_pred             CCCCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCC
Q 047377           19 PSKRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDS   97 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~   97 (160)
                      ..+++.|+|||.+..+ .++.++||||+||+++||++|+.||..........+.....              ..   ...
T Consensus       165 ~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~--------------~~---~~~  227 (364)
T d1omwa3         165 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL--------------TM---AVE  227 (364)
T ss_dssp             CCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSS--------------SC---CCC
T ss_pred             cccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc--------------cC---CCC
Confidence            3456899999999755 58999999999999999999999997432211111111110              01   111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 047377           98 ISMEGVMRAMGIAIACLHKDPSKRPS-----MVDIVH  129 (160)
Q Consensus        98 ~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~ev~~  129 (160)
                      .+......+.+++.+||+.||.+||+     +.++++
T Consensus       228 ~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         228 LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             CCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             CCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            22223345688999999999999999     577764

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=3.4e-16  Score=118.47  Aligned_cols=90  Identities=12%  Similarity=0.082  Sum_probs=65.4

Q ss_pred             CCCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           19 PSKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      ..+++.|+|||.+..+.++.++||||+||+++||++|+.||..........  ....       .      .+.     +
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~--~i~~-------~------~~~-----~  222 (320)
T d1xjda_         163 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH--SIRM-------D------NPF-----Y  222 (320)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH-------C------CCC-----C
T ss_pred             cCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHH--HHHc-------C------CCC-----C
Confidence            345688999999999999999999999999999999999997443211111  1111       0      112     2


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMV-DIV  128 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~-ev~  128 (160)
                      |......+.+++.+||..||.+||++. +++
T Consensus       223 p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  253 (320)
T d1xjda_         223 PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  253 (320)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             CccCCHHHHHHHHHhcccCCCCCcCHHHHHH
Confidence            222234568999999999999999985 664

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.6e-15  Score=112.17  Aligned_cols=84  Identities=13%  Similarity=0.216  Sum_probs=62.8

Q ss_pred             CCCCCcchhhHhhhcCC-cccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSKSD-DLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~-s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .+++.|+|||++..+.+ +.++||||+||+++||++|+.||....        ....+     .        ... ...+
T Consensus       170 ~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~--------~i~~~-----~--------~~~-~~~~  227 (273)
T d1xwsa_         170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--------EIIRG-----Q--------VFF-RQRV  227 (273)
T ss_dssp             CSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------HHHHC-----C--------CCC-SSCC
T ss_pred             ccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch--------HHhhc-----c--------cCC-CCCC
Confidence            45688999999988775 577999999999999999999996311        11110     0        111 2223


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      +    ..+.+++.+||+.||.+|||+.|+++
T Consensus       228 s----~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         228 S----SECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             C----HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             C----HHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            3    45688999999999999999999876

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.51  E-value=1.5e-15  Score=116.21  Aligned_cols=90  Identities=14%  Similarity=0.052  Sum_probs=65.6

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .+++.|||||.+.+..++.++||||+||+++||++|+.||..........  ....               ...   ..+
T Consensus       199 ~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~--~i~~---------------~~~---~~p  258 (350)
T d1rdqe_         199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE--KIVS---------------GKV---RFP  258 (350)
T ss_dssp             EECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH---------------CCC---CCC
T ss_pred             cCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHH--HHhc---------------CCC---CCC
Confidence            34689999999999999999999999999999999999997443211111  2221               111   122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRP-----SMVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~  129 (160)
                      ......+.+++.+||+.||.+|+     ++.++++
T Consensus       259 ~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         259 SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence            22234568899999999999994     8888875

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=4e-15  Score=111.14  Aligned_cols=108  Identities=6%  Similarity=-0.061  Sum_probs=66.1

Q ss_pred             CCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhh---hccccCC
Q 047377           21 KRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEW---MDEILLQ   95 (160)
Q Consensus        21 ~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~d~~l~~   95 (160)
                      .++.|+|||.+..+ .++.++||||+||+++||++|..||..... .....+.........+.-......   ..-.. .
T Consensus       162 gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~  240 (299)
T d1ua2a_         162 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKS-F  240 (299)
T ss_dssp             CCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCC-C
T ss_pred             cChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhcc-C
Confidence            46889999998765 579999999999999999999999974432 222222222211000000000000   00000 0


Q ss_pred             CCCCH-----HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           96 DSISM-----EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        96 ~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ...+.     .....+.+++.+|++.||++|||+.|+++
T Consensus       241 ~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         241 PGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             CCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             CCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence            01111     12345788999999999999999999875

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.49  E-value=5.5e-15  Score=110.30  Aligned_cols=104  Identities=13%  Similarity=-0.024  Sum_probs=71.5

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchhhhhccccCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVKEWMDEILLQDSI   98 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~   98 (160)
                      .++|.|||||.+.+..++.++||||||++++||++|..||...... ..........       .. ....-+.+ ...+
T Consensus       174 ~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~-------~~-~~~~~~~l-~~~~  244 (293)
T d1csna_         174 SGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGE-------KK-QSTPLREL-CAGF  244 (293)
T ss_dssp             CSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHH-------HH-HHSCHHHH-TTTS
T ss_pred             EEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHh-------cc-CCCChHHh-cCCC
Confidence            3578999999999999999999999999999999999999732211 1111111110       00 00000111 2233


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHcccc
Q 047377           99 SMEGVMRAMGIAIACLHKDPSKRPSMVDIVHAVSKSDD  136 (160)
Q Consensus        99 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~l~~  136 (160)
                      |    ..+..++..|+..+|.+||++..+.+.|+++..
T Consensus       245 p----~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~  278 (293)
T d1csna_         245 P----EEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE  278 (293)
T ss_dssp             C----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             C----HHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHH
Confidence            3    457888899999999999999998888877654

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=2.6e-15  Score=114.36  Aligned_cols=90  Identities=13%  Similarity=0.087  Sum_probs=65.5

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCC
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSIS   99 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~   99 (160)
                      .++|.|+|||.+.+..++.++||||+||+++||++|+.||..........  ....               ..+   .+|
T Consensus       166 ~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~--~i~~---------------~~~---~~p  225 (337)
T d1o6la_         166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE--LILM---------------EEI---RFP  225 (337)
T ss_dssp             EECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHH---------------CCC---CCC
T ss_pred             eeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHH--HHhc---------------CCC---CCC
Confidence            34689999999999999999999999999999999999997544221111  1111               111   222


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 047377          100 MEGVMRAMGIAIACLHKDPSKRPS-----MVDIVH  129 (160)
Q Consensus       100 ~~~~~~~~~l~~~C~~~~p~~RPs-----~~ev~~  129 (160)
                      ......+.+++.+||+.||.+|++     +.++++
T Consensus       226 ~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         226 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             ccCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence            233345688999999999999995     677765

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.44  E-value=9.2e-15  Score=108.43  Aligned_cols=95  Identities=13%  Similarity=0.064  Sum_probs=64.9

Q ss_pred             CCCCCCcchhhHhhhc------CCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccc
Q 047377           19 PSKRPSMVDIVYALSK------SDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEI   92 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~------~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   92 (160)
                      ..+++.|+|||++...      .++.++||||+||+++||++|+.||..........  ....+       .      ..
T Consensus       169 ~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~--~i~~~-------~------~~  233 (277)
T d1phka_         169 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR--MIMSG-------N------YQ  233 (277)
T ss_dssp             CCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--HHHHT-------C------CC
T ss_pred             eeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHH--HHHhC-------C------CC
Confidence            3445789999998643      46789999999999999999999997443222111  22211       0      01


Q ss_pred             cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           93 LLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        93 l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      . ...........+.+++.+||+.+|.+||++.||++
T Consensus       234 ~-~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         234 F-GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             C-CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             C-CCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            1 11111223356788999999999999999998865

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.1e-14  Score=110.03  Aligned_cols=93  Identities=15%  Similarity=0.079  Sum_probs=65.9

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHHHHHHHHHcCCccccccchhhhhccccCCCCCCH
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLWAKVEGILEGNEGRKVKRVKEWMDEILLQDSISM  100 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~  100 (160)
                      ..+.|+|||......++.++||||+||++++|++|..||..........  ....+     ...+..    .. ...+  
T Consensus       165 ~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~--~i~~~-----~~~~~~----~~-~~~~--  230 (321)
T d1tkia_         165 TAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIE--NIMNA-----EYTFDE----EA-FKEI--  230 (321)
T ss_dssp             SCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH--HHHHT-----CCCCCH----HH-HTTS--
T ss_pred             cccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHH--HHHhC-----CCCCCh----hh-ccCC--
Confidence            4588999999999999999999999999999999999997443211111  22210     000000    00 0112  


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377          101 EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus       101 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                        ...+.+++.+|+..||.+||++.|+++
T Consensus       231 --s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         231 --SIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             --CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             --CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              245688999999999999999999987

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=6.4e-14  Score=105.24  Aligned_cols=108  Identities=9%  Similarity=-0.006  Sum_probs=64.8

Q ss_pred             CCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhH-HHHHHHHHcCCcccccc-----chhhhhcccc
Q 047377           21 KRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVL-WAKVEGILEGNEGRKVK-----RVKEWMDEIL   93 (160)
Q Consensus        21 ~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~d~~l   93 (160)
                      +++.|+|||.+... .++.++||||+||+++||++|+.||....... ...+.........+...     .....+....
T Consensus       183 gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (318)
T d3blha1         183 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVK  262 (318)
T ss_dssp             SCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCS
T ss_pred             cCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccc
Confidence            56889999998765 68899999999999999999999997433211 12222222110000000     0000000000


Q ss_pred             CCCCCCH-H------HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           94 LQDSISM-E------GVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        94 ~~~~~~~-~------~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                       ....+. .      ....+.+++.+||+.||.+|||+.|+++
T Consensus       263 -~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         263 -GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             -SCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             -cccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence             011111 1      1224567899999999999999999885

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.39  E-value=6.1e-14  Score=103.96  Aligned_cols=110  Identities=12%  Similarity=0.023  Sum_probs=65.1

Q ss_pred             CCCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhh--cccc--
Q 047377           20 SKRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWM--DEIL--   93 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--d~~l--   93 (160)
                      .+.+.|+|||.+... .++.++||||+||+++||++|+.||..... .....+...........-.......  ....  
T Consensus       161 ~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (286)
T d1ob3a_         161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV  240 (286)
T ss_dssp             -CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCC
T ss_pred             cccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccccc
Confidence            345789999998765 468999999999999999999999974332 1112222222100000000000000  0000  


Q ss_pred             ----CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           94 ----LQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        94 ----~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                          +...........+.+++.+|++.||++|||++|+++
T Consensus       241 ~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                000111122346678999999999999999999874

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.5e-13  Score=102.50  Aligned_cols=111  Identities=12%  Similarity=-0.018  Sum_probs=66.3

Q ss_pred             CCCCCcchhhHhhhcC-CcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchhhhhc--cccC-
Q 047377           20 SKRPSMVDIVYALSKS-DDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVKEWMD--EILL-   94 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~-~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d--~~l~-   94 (160)
                      .+++.|+|||...... ++.++||||+||++++|++|+.||...... ....+...................+  ...+ 
T Consensus       163 ~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (298)
T d1gz8a_         163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK  242 (298)
T ss_dssp             BCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCC
T ss_pred             cccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccccccccccc
Confidence            4558999999887765 578999999999999999999999744321 1111112111100000000000000  0000 


Q ss_pred             CCCCCH-----HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           95 QDSISM-----EGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        95 ~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ....+.     .....+.+++.+|++.||.+|||+.|+++.
T Consensus       243 ~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         243 WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             CCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            000000     112456889999999999999999999874

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=7.7e-13  Score=100.89  Aligned_cols=110  Identities=14%  Similarity=-0.014  Sum_probs=67.8

Q ss_pred             CCCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchhHH-HHHHHHHcCCc-------------------c
Q 047377           20 SKRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKVLW-AKVEGILEGNE-------------------G   79 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~-~~~~~~~~~~~-------------------~   79 (160)
                      ..++.|+|||.+.+..++.++||||+||+++|+++|+.||........ ..+.....+..                   .
T Consensus       179 ~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (355)
T d2b1pa1         179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK  258 (355)
T ss_dssp             --CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCC
T ss_pred             cccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcc
Confidence            345789999999999999999999999999999999999974432211 11111111000                   0


Q ss_pred             ccccchhhhhccccCCCC--CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           80 RKVKRVKEWMDEILLQDS--ISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        80 ~~~~~~~~~~d~~l~~~~--~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      .........+........  ........+.+++.+|+..||++|||++|+++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         259 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             CCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            000000111111110001  11234556789999999999999999999975

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.33  E-value=2.7e-13  Score=103.16  Aligned_cols=109  Identities=16%  Similarity=0.106  Sum_probs=67.7

Q ss_pred             CCCCcchhhHhhhcCCcccCccCCCeeehhhhhhCCCCCCCCchh-------HHHHHHHHHcCCccc---cccchhhhhc
Q 047377           21 KRPSMVDIVYALSKSDDLLSDISDDALSSSQLISGEKAIDEEGKV-------LWAKVEGILEGNEGR---KVKRVKEWMD   90 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-------~~~~~~~~~~~~~~~---~~~~~~~~~d   90 (160)
                      +++.|+|||.+....++.++||||+||+++|+++|+.||......       ........+......   .........+
T Consensus       191 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~  270 (362)
T d1q8ya_         191 QTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFN  270 (362)
T ss_dssp             SCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBC
T ss_pred             ccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccc
Confidence            457899999999999999999999999999999999998632210       111111111100000   0000000000


Q ss_pred             c-------------------ccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           91 E-------------------ILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        91 ~-------------------~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      .                   .. ...........+.+++.+|+..||.+|||+.|+++.
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H  328 (362)
T d1q8ya_         271 SRGLLRNISKLKFWPLEDVLTE-KYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  328 (362)
T ss_dssp             C--CBSSCCCCCBCCHHHHHHH-TTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             cchhhhccccccCCchhhhccc-ccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            0                   00 122345567788999999999999999999999763

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=6.5e-13  Score=100.82  Aligned_cols=117  Identities=12%  Similarity=0.023  Sum_probs=68.0

Q ss_pred             CCCCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhHH-HHHHHHHcCCccc-----cccchhhhh--
Q 047377           19 PSKRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVLW-AKVEGILEGNEGR-----KVKRVKEWM--   89 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~--   89 (160)
                      ..+++.|+|||.+.+. .++.++||||+||+++||++|+.||........ ............+     .........  
T Consensus       178 ~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (346)
T d1cm8a_         178 YVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKG  257 (346)
T ss_dssp             SCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHH
T ss_pred             ccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhcc
Confidence            3456889999998764 568999999999999999999999974432111 1111111000000     000000000  


Q ss_pred             ccccCC---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHccc
Q 047377           90 DEILLQ---DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA--VSKSD  135 (160)
Q Consensus        90 d~~l~~---~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~--L~~l~  135 (160)
                      .+....   ..........+.+++.+|+..||.+|||+.|+++.  |+.+.
T Consensus       258 ~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         258 LPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             SCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             CCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence            000000   00111122345789999999999999999999874  55443

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=1.5e-13  Score=103.83  Aligned_cols=94  Identities=16%  Similarity=0.092  Sum_probs=62.9

Q ss_pred             CCCCCCcchhhHhhhc--CCcccCccCCCeeehhhhhhCCCCCCCCch-hHHHHHHHHHcCCccccccchhhhhccccCC
Q 047377           19 PSKRPSMVDIVYALSK--SDDLLSDISDDALSSSQLISGEKAIDEEGK-VLWAKVEGILEGNEGRKVKRVKEWMDEILLQ   95 (160)
Q Consensus        19 ~~~~~~y~aPE~~~~~--~~s~ksDv~s~Gvvl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~   95 (160)
                      ..+.+.|++||.+...  .++.++||||+||+++||++|+.||..... .....+....              ....   
T Consensus       190 ~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~--------------~~~~---  252 (322)
T d1vzoa_         190 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI--------------LKSE---  252 (322)
T ss_dssp             GGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHH--------------HHCC---
T ss_pred             cccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc--------------ccCC---
Confidence            4456889999999765  467899999999999999999999973221 1111111111              1111   


Q ss_pred             CCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 047377           96 DSISMEGVMRAMGIAIACLHKDPSKRPS-----MVDIVH  129 (160)
Q Consensus        96 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~ev~~  129 (160)
                      ..++......+.+++.+||+.+|.+||+     +.|+++
T Consensus       253 ~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         253 PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             CCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            1223334456788999999999999995     667754

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=2.1e-13  Score=103.92  Aligned_cols=111  Identities=9%  Similarity=0.077  Sum_probs=66.9

Q ss_pred             CCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchh-HHHHHHHHHcCCccccccchhh----hhccccC
Q 047377           21 KRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKV-LWAKVEGILEGNEGRKVKRVKE----WMDEILL   94 (160)
Q Consensus        21 ~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~d~~l~   94 (160)
                      ..+.|+|||.+... .++.++||||+||+++||++|+.||...... ....+........   ......    ..+..++
T Consensus       184 gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~---~~~~~~~~~~~~~~~~~  260 (350)
T d1q5ka_         184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT---REQIREMNPNYTEFKFP  260 (350)
T ss_dssp             SCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCC---HHHHHHHCC---CCCCC
T ss_pred             ccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCCh---HHhhhhhccchhhcccc
Confidence            34789999988754 6899999999999999999999999744321 1111111111000   000000    0000000


Q ss_pred             ---C----CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHcc
Q 047377           95 ---Q----DSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVHA--VSKS  134 (160)
Q Consensus        95 ---~----~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~--L~~l  134 (160)
                         .    ..........+.+++.+|+..||.+|||+.|+++.  ++.+
T Consensus       261 ~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  309 (350)
T d1q5ka_         261 QIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  309 (350)
T ss_dssp             CCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             ccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence               0    00011123456788999999999999999999863  4444

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=2.3e-12  Score=97.83  Aligned_cols=111  Identities=11%  Similarity=0.074  Sum_probs=64.9

Q ss_pred             CCCCCcchhhHhhhc-CCcccCccCCCeeehhhhhhCCCCCCCCchhHH-HHHHHHHcCCcccc-----ccchhhhhccc
Q 047377           20 SKRPSMVDIVYALSK-SDDLLSDISDDALSSSQLISGEKAIDEEGKVLW-AKVEGILEGNEGRK-----VKRVKEWMDEI   92 (160)
Q Consensus        20 ~~~~~y~aPE~~~~~-~~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~d~~   92 (160)
                      .+++.|+|||.+..+ .++.++||||+||+++||++|+.||........ ..............     ...........
T Consensus       173 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (345)
T d1pmea_         173 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSL  252 (345)
T ss_dssp             CSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTS
T ss_pred             cccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccC
Confidence            356789999998554 568899999999999999999999974332111 11111111000000     00000000000


Q ss_pred             cCCCCCCHH-----HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 047377           93 LLQDSISME-----GVMRAMGIAIACLHKDPSKRPSMVDIVHA  130 (160)
Q Consensus        93 l~~~~~~~~-----~~~~~~~l~~~C~~~~p~~RPs~~ev~~~  130 (160)
                      ......+..     ....+..++.+|++.||.+||++.|+++.
T Consensus       253 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         253 PHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             CCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            000111111     12356789999999999999999999874

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=3.2e-12  Score=94.38  Aligned_cols=109  Identities=7%  Similarity=-0.047  Sum_probs=63.2

Q ss_pred             CCCCcchhhHhhhcC-CcccCccCCCeeehhhhhhCCCCCCC-Cc-hhHHHHHHHHHcCCccccccchhhhhccc----c
Q 047377           21 KRPSMVDIVYALSKS-DDLLSDISDDALSSSQLISGEKAIDE-EG-KVLWAKVEGILEGNEGRKVKRVKEWMDEI----L   93 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~-~s~ksDv~s~Gvvl~elltg~~p~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----l   93 (160)
                      ..+.|+|||.+.... ++.++||||+||+++||++|+.|+.. .. ......+...................+..    .
T Consensus       163 ~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (292)
T d1unla_         163 VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMY  242 (292)
T ss_dssp             SCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCC
T ss_pred             cccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccc
Confidence            346789999887665 68999999999999999999998642 22 11222222222110000000000000000    0


Q ss_pred             ----CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           94 ----LQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        94 ----~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                          ............+.+++.+|++.||.+|||+.|+++
T Consensus       243 ~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         243 PATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                000111122345678899999999999999999865

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.19  E-value=1.6e-12  Score=97.94  Aligned_cols=109  Identities=8%  Similarity=-0.013  Sum_probs=63.9

Q ss_pred             CCCCcchhhHhhhcC-CcccCccCCCeeehhhhhhCCCCCCCCchhH--HHHHHHHHc---------CCccccccchhhh
Q 047377           21 KRPSMVDIVYALSKS-DDLLSDISDDALSSSQLISGEKAIDEEGKVL--WAKVEGILE---------GNEGRKVKRVKEW   88 (160)
Q Consensus        21 ~~~~y~aPE~~~~~~-~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~--~~~~~~~~~---------~~~~~~~~~~~~~   88 (160)
                      .++.|+|||.+.... ++.++||||+|++++|+++|+.||.......  ...+...+.         .............
T Consensus       191 ~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  270 (328)
T d3bqca1         191 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI  270 (328)
T ss_dssp             SCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGT
T ss_pred             cCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchh
Confidence            346799999987654 7899999999999999999999986332211  111111110         0000000000000


Q ss_pred             hcc-------ccCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           89 MDE-------ILLQDSISMEGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        89 ~d~-------~l~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ...       ..............+.+++.+|+..||.+|||++|+++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         271 LGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             CCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            000       00000111122345688999999999999999999875

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.5e-11  Score=93.11  Aligned_cols=108  Identities=9%  Similarity=0.051  Sum_probs=63.7

Q ss_pred             CCCcchhhHhhhcC-CcccCccCCCeeehhhhhhCCCCCCCCchhHH-HHHHHHHcCCccc-----cccchhhhhccccC
Q 047377           22 RPSMVDIVYALSKS-DDLLSDISDDALSSSQLISGEKAIDEEGKVLW-AKVEGILEGNEGR-----KVKRVKEWMDEILL   94 (160)
Q Consensus        22 ~~~y~aPE~~~~~~-~s~ksDv~s~Gvvl~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~d~~l~   94 (160)
                      .+.|+|||...... ++.++||||+||++++|++|+.||........ ..+.........+     ..............
T Consensus       181 ~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (348)
T d2gfsa1         181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ  260 (348)
T ss_dssp             HHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCC
T ss_pred             cccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhccc
Confidence            36799999877654 68899999999999999999999974432221 1111111100000     00000000000000


Q ss_pred             CCCCCH-----HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 047377           95 QDSISM-----EGVMRAMGIAIACLHKDPSKRPSMVDIVH  129 (160)
Q Consensus        95 ~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~  129 (160)
                      ....+.     .....+.+++.+|+..||.+|||+.|+++
T Consensus       261 ~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         261 MPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             CCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence            001111     11245678999999999999999999987